{ "group": "genedb", "dataset": "genedb_tbrucei", "lines": 20360, "skipped_lines": 231, "associations": 20128, "messages": { "other": [], "gorule-0000059": [ { "level": "WARNING", "line": "TriTrypDB\tTb04.24M18.150\tTb04.24M18.150\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb09.v4.0018\tTb09.v4.0018\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb10.v4.0045\tTb10.v4.0045\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tprohibitin, putative\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb10.v4.0053\tTb10.v4.0053\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5050b\tTb11.02.5050b\t\tGO:0004674\tGO_REF:0000002\tISS\tInterPro:IPR008271\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20040723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5050b\tTb11.02.5050b\t\tGO:0005524\tGO_REF:0000002\tISS\tInterPro:IPR000719\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20040723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5050b\tTb11.02.5050b\t\tGO:0006468\tGO_REF:0000002\tISS\tInterPro:IPR000719\tP\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20040723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5060b\tTb11.02.5060b\t\tGO:0003677\tGO_REF:0000002\tISS\tInterPro:IPR000330\tF\tSNF2 DNA repair protein, putative\t\tmRNA\ttaxon:185431\t20041001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5060b\tTb11.02.5060b\t\tGO:0005524\tGO_REF:0000002\tISS\tInterPro:IPR000330|InterPro:IPR001650\tF\tSNF2 DNA repair protein, putative\t\tmRNA\ttaxon:185431\t20041001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5060b\tTb11.02.5060b\t\tGO:0006338\tGO_REF:0000002\tISS\tGB:AAF24984.1\tP\tSNF2 DNA repair protein, putative\t\tmRNA\ttaxon:185431\t20041001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5090\tTGS1\t\tGO:0005654\tPMID:17610965\tIDA\t\tC\ttrimethylguanosine synthase\t\tmRNA\ttaxon:185431\t20181112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5090\tTGS1\t\tGO:0036261\tPMID:17610965\tIMP\t\tP\ttrimethylguanosine synthase\t\tmRNA\ttaxon:185431\t20181112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5090\tTGS1\t\tGO:0071164\tPMID:17610965\tIMP\t\tF\ttrimethylguanosine synthase\t\tmRNA\ttaxon:185431\t20181112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5090b\tTb11.02.5090b\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tproliferator-activated receptor-interacting protein (PRIP) interacting protein (PIMT), putative, pseudogene\t\tpseudogenic_transcript\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5100b\tTb11.02.5100b\t\tGO:0005739\tPMID:20660476\tISS\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20130725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5105\tPOMP15\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 15\t\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5105b\tTb11.02.5105b\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5110b\tTb11.02.5110b\t\tGO:0000808\tGO_REF:0000002\tISS\tUniProt:O16810\tC\torigin recognition complex subunit 1 (ORC1), putative\t\tmRNA\ttaxon:185431\t20041206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5110b\tTb11.02.5110b\t\tGO:0003677\tGO_REF:0000002\tISS\tUniProt:O16810\tF\torigin recognition complex subunit 1 (ORC1), putative\t\tmRNA\ttaxon:185431\t20041206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5110b\tTb11.02.5110b\t\tGO:0006260\tGO_REF:0000002\tISS\tUniProt:O16810\tP\torigin recognition complex subunit 1 (ORC1), putative\t\tmRNA\ttaxon:185431\t20041206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5120b\tTb11.02.5120b\t\tGO:0003723\tPMID:18951088\tISO\tGeneDB:Tb927.11.7218\tF\tmitochondrial edited mRNA stability factor 1 subunit, putative\t\tmRNA\ttaxon:185431\t20130730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5120b\tTb11.02.5120b\t\tGO:0043631\tPMID:18951088\tISO\tGeneDB:Tb927.11.7218\tP\tmitochondrial edited mRNA stability factor 1 subunit, putative\t\tmRNA\ttaxon:185431\t20130730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5120b\tTb11.02.5120b\t\tGO:0048255\tPMID:18951088\tISO\tGeneDB:Tb927.11.7218\tP\tmitochondrial edited mRNA stability factor 1 subunit, putative\t\tmRNA\ttaxon:185431\t20130730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0000178\tGO_REF:0000002\tISS\t\tC\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0004540\tGO_REF:0000002\tISS\t\tF\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0005085\tGO_REF:0000002\tISS\t\tF\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0005634\tPMID:26946399\tIDA\t\tC\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20170720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0005739\tPMID:15223320\tISS\t\tC\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20130725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0006364\tGO_REF:0000002\tISS\t\tP\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0000178\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5380\tC\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0004540\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5380\tF\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0005085\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5380\tF\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0005739\tPMID:15223320\tISO\tGeneDB:Tb11.02.5380\tC\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20130725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0006364\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5380\tP\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390\tGRBC4\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tP\tmRNA processing protein, putative\tNCDS.Tb927.11.7452|MRB5390\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390\tGRBC4\t\tGO:0000963\tPMID:18073385\tEXP\t\tP\tmRNA processing protein, putative\tNCDS.Tb927.11.7452|MRB5390\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390\tGRBC4\t\tGO:0003729\tPMID:18073385\tEXP\t\tF\tmRNA processing protein, putative\tNCDS.Tb927.11.7452|MRB5390\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390\tGRBC4\t\tGO:0005739\tPMID:20660476|PMID:18073385\tISS\t\tC\tmRNA processing protein, putative\tNCDS.Tb927.11.7452|MRB5390\tmRNA\ttaxon:185431\t20130725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390\tGRBC4\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tC\tmRNA processing protein, putative\tNCDS.Tb927.11.7452|MRB5390\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390\tGRBC4\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmRNA processing protein, putative\tNCDS.Tb927.11.7452|MRB5390\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390b\tTb11.02.5390b\t\tGO:0000963\tPMID:18073385\tISO\tGeneDB:Tb11.02.5390\tP\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390b\tTb11.02.5390b\t\tGO:0003729\tPMID:18073385\tISO\tGeneDB:Tb11.02.5390\tF\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390b\tTb11.02.5390b\t\tGO:0005739\tPMID:20660476|PMID:18073385\tISO\tGeneDB:Tb11.02.5390\tC\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20130725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400\tTb11.02.5400\t\tGO:0004122\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137\tF\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400\tTb11.02.5400\t\tGO:0019344\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137\tP\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400b\tTb11.02.5400b\t\tGO:0004122\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137|GeneDB:Tb11.02.5400\tF\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400b\tTb11.02.5400b\t\tGO:0019344\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137|GeneDB:Tb11.02.5400\tP\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5410\tAOS1\t\tGO:0003824\tGO_REF:0000002\tISS\t\tF\tubiquitin activating enzyme (E1) subunit Aos1, putative\tNCDS.Tb927.11.7454\tmRNA\ttaxon:185431\t20130726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5410\tAOS1\t\tGO:0005515\tPMID:25959766\tIPI\tGeneDB:Tb927.5.3430\tF\tubiquitin activating enzyme (E1) subunit Aos1, putative\tNCDS.Tb927.11.7454\tmRNA\ttaxon:185431\t20160818\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5410\tAOS1\t\tGO:0008641\tPMID:25959766\tIDA\t\tF\tubiquitin activating enzyme (E1) subunit Aos1, putative\tNCDS.Tb927.11.7454\tmRNA\ttaxon:185431\t20160818\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5410\tAOS1\t\tGO:0016925\tPMID:25959766\tTAS\t\tP\tubiquitin activating enzyme (E1) subunit Aos1, putative\tNCDS.Tb927.11.7454\tmRNA\ttaxon:185431\t20160818\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5410\tAOS1\t\tGO:0019948\tPMID:25959766\tIDA\t\tF\tubiquitin activating enzyme (E1) subunit Aos1, putative\tNCDS.Tb927.11.7454\tmRNA\ttaxon:185431\t20160818\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5410\tAOS1\t\tGO:0031510\tPMID:25959766\tIPI\tGeneDB:Tb927.5.3430\tC\tubiquitin activating enzyme (E1) subunit Aos1, putative\tNCDS.Tb927.11.7454\tmRNA\ttaxon:185431\t20160818\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5410b\tTb11.02.5410b\t\tGO:0003824\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5410\tF\tubiquitin activating enzyme, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0005739\tPMID:19834910\tIDA\t\tC\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20200408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0005743\tPMID:19834910\tHDA\t\tC\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20200408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0016491\tGO_REF:0000002\tISS\t\tF\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420b\tTb11.02.5420b\t\tGO:0016021\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5420\tC\tNADPH-cytochrome p450 reductase, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420b\tTb11.02.5420b\t\tGO:0016491\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5420\tF\tNADPH-cytochrome p450 reductase, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420b\tTb11.02.5420b\t\tGO:0055114\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5420\tP\tNADPH-cytochrome p450 reductase, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0002082\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tP\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0005743\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0070069\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:0000281\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:0005856\tPMID:35447115\tIDA\t\tC\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:0032991\tPMID:35447115\tIPI\t\tC\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:0050821\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:1903673\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1790\tTb11.1790\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tretrotransposon hot spot protein (RHS, pseudogene), putative\t\tpseudogenic_transcript\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0149\tTb11.v5.0149\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0174\tTb11.v5.0174\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tribonuclease H1, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0233\tTb11.v5.0233\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0267\tCRD1\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tChromodomain protein 1\t\tmRNA\ttaxon:185431\t20220203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0306\tTb11.v5.0306\t\tGO:0004806\tGO_REF:0000011\tISM\tInterPro:IPR002921\tF\tTriglyceride lipase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0306\tTb11.v5.0306\t\tGO:0006629\tGO_REF:0000011\tISM\tInterPro:IPR002921\tP\tTriglyceride lipase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0388\tPHD2\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tPHD finger domain protein 2\t\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0396\tTb11.v5.0396\t\tGO:0005249\tGO_REF:0000011\tISM\tInterPro:IPR003131\tF\tpotassium voltage-gated channel, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0396\tTb11.v5.0396\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tpotassium voltage-gated channel, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0396\tTb11.v5.0396\t\tGO:0006813\tGO_REF:0000011\tISM\tInterPro:IPR003131\tP\tpotassium voltage-gated channel, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0396\tTb11.v5.0396\t\tGO:0008076\tGO_REF:0000011\tISM\tInterPro:IPR003131\tC\tpotassium voltage-gated channel, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0396\tTb11.v5.0396\t\tGO:0015272\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511301.140\tF\tpotassium voltage-gated channel, putative\t\tmRNA\ttaxon:185431\t20120823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0396\tTb11.v5.0396\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR003131\tC\tpotassium voltage-gated channel, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0422\tSET1\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 1\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0434\tTb11.v5.0434\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0480\tTb11.v5.0480\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA-directed RNA polymerase, alpha subunit, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0489\tTb11.v5.0489\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tretrotransposon hot spot (RHS) protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0534\tTb11.v5.0534\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0539\tBBS4\t\tGO:0034452\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tBardet-Biedl syndrome 4 protein, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0539\tBBS4\t\tGO:0034464\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tC\tBardet-Biedl syndrome 4 protein, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0539\tBBS4\t\tGO:0043014\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tBardet-Biedl syndrome 4 protein, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0539\tBBS4\t\tGO:0048487\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tBardet-Biedl syndrome 4 protein, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0577\tTb11.v5.0577\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tcasein kinase I, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0577\tTb11.v5.0577\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tcasein kinase I, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0577\tTb11.v5.0577\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcasein kinase I, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0587\tPKA-R\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4610\tC\tprotein kinase A regulatory subunit\tFM458\tmRNA\ttaxon:185431\t20150420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0587\tPKA-R\t\tGO:0009372\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4610\tP\tprotein kinase A regulatory subunit\tFM458\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0587\tPKA-R\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4610\tP\tprotein kinase A regulatory subunit\tFM458\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0587\tPKA-R\t\tGO:0060294\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4610\tP\tprotein kinase A regulatory subunit\tFM458\tmRNA\ttaxon:185431\t20150420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0713\tRHS6\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRetrotransposon hot spot protein 6 (RHS6), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0713\tRHS6\t\tGO:0005634\tPMID:30544263\tIDA\t\tC\tRetrotransposon hot spot protein 6 (RHS6), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0713\tRHS6\t\tGO:0006406\tPMID:30544263\tIMP\t\tP\tRetrotransposon hot spot protein 6 (RHS6), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0713\tRHS6\t\tGO:0042789\tPMID:30544263\tIMP\t\tP\tRetrotransposon hot spot protein 6 (RHS6), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0713\tRHS6\t\tGO:0051726\tPMID:30544263\tIMP\t\tP\tRetrotransposon hot spot protein 6 (RHS6), putative\t\tmRNA\ttaxon:185431\t20220802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0713\tRHS6\t\tGO:1902969\tPMID:30544263\tIMP\t\tP\tRetrotransposon hot spot protein 6 (RHS6), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0729\tTb11.v5.0729\t\tGO:0004747\tGO_REF:0000024\tISO\tGeneDB:LmjF.27.0420\tF\tribokinase, putative\t\tmRNA\ttaxon:185431\t20170612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0729\tTb11.v5.0729\t\tGO:0006014\tGO_REF:0000024\tISO\tGeneDB:LmjF.27.0420\tP\tribokinase, putative\t\tmRNA\ttaxon:185431\t20170612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0818\tPEX2\t\tGO:0006096\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2340\tP\tPeroxisome biogenesis protein 2, putative\tGIM1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0818\tPEX2\t\tGO:0007031\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2340\tP\tPeroxisome biogenesis protein 2, putative\tGIM1\tmRNA\ttaxon:185431\t20141208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0818\tPEX2\t\tGO:0017038\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2340\tP\tPeroxisome biogenesis protein 2, putative\tGIM1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0819\tTb11.v5.0819\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0819\tTb11.v5.0819\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0819\tTb11.v5.0819\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0835\tTb11.v5.0835\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0835\tTb11.v5.0835\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0849\tTb11.v5.0849\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin motor domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.1039\tCBP110\t\tGO:0005846\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2990\tC\tnuclear cap binding complex subunit CBP110, putative\t\tmRNA\ttaxon:185431\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.05\tTb927.1.05\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.05\tTb927.1.05\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1000\tTb927.1.1000\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tdevelopmentally regulated phosphoprotein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1010\tTb927.1.1010\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tE3 ubiquitin-protein ligase KCMF1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1010\tTb927.1.1010\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tE3 ubiquitin-protein ligase KCMF1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1010\tTb927.1.1010\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tE3 ubiquitin-protein ligase KCMF1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1020\tTb927.1.1020\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1030\tNOP49\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1030\tNOP49\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1030\tNOP49\t\tGO:0005730\tPMID:29931198\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20180626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1030\tNOP49\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1030\tNOP49\t\tGO:0005819\tPMID:29931198\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20190111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1030\tNOP49\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1050\tTb927.1.1050\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tMetallo-dependent phosphatase-like domain-containing protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1050\tTb927.1.1050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMetallo-dependent phosphatase-like domain-containing protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1060\tTb927.1.1060\t\tGO:0004529\tGO_REF:0000050\tISM\tPANTHER:PTHR10870\tF\tCell cycle checkpoint protein RAD1-like, putative\t\tmRNA\ttaxon:185431\t20140731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1060\tTb927.1.1060\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tCell cycle checkpoint protein RAD1-like, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1060\tTb927.1.1060\t\tGO:0006281\tGO_REF:0000050\tISM\tPANTHER:PTHR10870\tP\tCell cycle checkpoint protein RAD1-like, putative\t\tmRNA\ttaxon:185431\t20140731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1080\tTSP1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1080\tTSP1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1080\tTSP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1090\tTb927.1.1090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1100\tBBP109\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1100\tBBP109\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1120\tRRP8\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tribosomal RNA-processing protein 8, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1120\tRRP8\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tribosomal RNA-processing protein 8, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1120\tRRP8\t\tGO:0008168\tGO_REF:0000011\tISM\tInterPro:IPR007823\tF\tribosomal RNA-processing protein 8, putative\t\tmRNA\ttaxon:185431\t20140731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1130\tTb927.1.1130\t\tGO:0004368\tGO_REF:0000012\tISA\tUniProtKB:P32191\tF\tglycerol-3-phosphate dehydrogenase (FAD-dependent), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1130\tTb927.1.1130\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tglycerol-3-phosphate dehydrogenase (FAD-dependent), putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1130\tTb927.1.1130\t\tGO:0006072\tGO_REF:0000012\tISA\tUniProtKB:GPDM_MOUSE\tP\tglycerol-3-phosphate dehydrogenase (FAD-dependent), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1130\tTb927.1.1130\t\tGO:0009331\tGO_REF:0000012\tISA\tUniProtKB:GPDM_MOUSE\tC\tglycerol-3-phosphate dehydrogenase (FAD-dependent), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1140\tTb927.1.1140\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tTransmembrane protein 231, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1140\tTb927.1.1140\t\tGO:0032880\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tP\tTransmembrane protein 231, putative\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1140\tTb927.1.1140\t\tGO:0035869\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tC\tTransmembrane protein 231, putative\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1140\tTb927.1.1140\t\tGO:0060170\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tC\tTransmembrane protein 231, putative\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1140\tTb927.1.1140\t\tGO:0060271\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tP\tTransmembrane protein 231, putative\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1150\tTb927.1.1150\t\tGO:0005200\tGO_REF:0000012\tISA\tUniProtKB:TBG1_HUMAN\tF\tzeta tubulin\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1150\tTb927.1.1150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzeta tubulin\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1160\tKRIPP3\t\tGO:0005739\tPMID:17646387\tIDA\t\tC\tMitoribosomal LSU assembly factor 26\tmt-LAF26|PPR3\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1160\tKRIPP3\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal LSU assembly factor 26\tmt-LAF26|PPR3\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1160\tKRIPP3\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitoribosomal LSU assembly factor 26\tmt-LAF26|PPR3\tmRNA\ttaxon:185431\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1170\tRPB12\t\tGO:0003677\tPMID:16962183\tRCA\t\tF\tDNA-directed RNA polymerase 2, RPB12 subunit\t\tmRNA\ttaxon:185431\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1170\tRPB12\t\tGO:0003899\tPMID:16962183\tRCA\t\tF\tDNA-directed RNA polymerase 2, RPB12 subunit\t\tmRNA\ttaxon:185431\t20090603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1170\tRPB12\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase 2, RPB12 subunit\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1170\tRPB12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase 2, RPB12 subunit\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1170\tRPB12\t\tGO:0006351\tPMID:16962183\tRCA\t\tP\tDNA-directed RNA polymerase 2, RPB12 subunit\t\tmRNA\ttaxon:185431\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.120\tRHS4\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.120\tRHS4\t\tGO:0005634\tPMID:30544263\tIDA\t\tC\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.120\tRHS4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.120\tRHS4\t\tGO:0005634\tPMID:12455980\tIDA\t\tC\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.120\tRHS4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.120\tRHS4\t\tGO:0006406\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.120\tRHS4\t\tGO:0042789\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.120\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1200\tMRPS15\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein S15\tuS15m\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1200\tMRPS15\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein S15\tuS15m\tmRNA\ttaxon:185431\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1210\tTb927.1.1210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1210\tTb927.1.1210\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1220\tTb927.1.1220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRWD domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1220\tTb927.1.1220\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tRWD domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1230\tJ47\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1230\tJ47\t\tGO:0006457\tGO_REF:0000002\tISA\tUniProtKB:O75472\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1230\tJ47\t\tGO:0009408\tGO_REF:0000002\tISM\tInterPro:IPR012724\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1230\tJ47\t\tGO:0051082\tGO_REF:0000002\tISM\t\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1240\tTb927.1.1240\t\tGO:0003883\tPMID:20382188\tEXP\t\tF\tcytidine triphosphate synthase, putative\t\tmRNA\ttaxon:185431\t20100816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1240\tTb927.1.1240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcytidine triphosphate synthase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1240\tTb927.1.1240\t\tGO:0006241\tPMID:20382188\tEXP\t\tP\tcytidine triphosphate synthase, putative\t\tmRNA\ttaxon:185431\t20100816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1240\tTb927.1.1240\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tcytidine triphosphate synthase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1270\tTb927.1.1270\t\tGO:0000096\tGO_REF:0000012\tISA\tUniProtKB:MHT1_YEAST\tP\thomocysteine S-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1270\tTb927.1.1270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thomocysteine S-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1270\tTb927.1.1270\t\tGO:0008898\tGO_REF:0000012\tISA\tUniProtKB:Q9M1W4\tF\thomocysteine S-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1270\tTb927.1.1270\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thomocysteine S-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1300\tTb927.1.1300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical transmembrane protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1310\tTb927.1.1310\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttransmembrane protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1330\tMEAT1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tMitochondrial Editosome-like Complex TUTase\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1330\tMEAT1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial Editosome-like Complex TUTase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1330\tMEAT1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial Editosome-like Complex TUTase\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1330\tMEAT1\t\tGO:0005739\tPMID:20403364\tEXP\t\tC\tMitochondrial Editosome-like Complex TUTase\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1330\tMEAT1\t\tGO:0006351\tPMID:20403364\tEXP\t\tP\tMitochondrial Editosome-like Complex TUTase\t\tmRNA\ttaxon:185431\t20100617\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1330\tMEAT1\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tMitochondrial Editosome-like Complex TUTase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1330\tMEAT1\t\tGO:0050265\tPMID:20403364\tIDA\t\tF\tMitochondrial Editosome-like Complex TUTase\t\tmRNA\ttaxon:185431\t20100617\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1330\tMEAT1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tMitochondrial Editosome-like Complex TUTase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1340\tTb927.1.1340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tQuinonprotein alcohol dehydrogenase-like protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1350\tTb927.1.1350\t\tGO:0003777\tGO_REF:0000002\tISA\tUniProtKB:Q2PQA9\tF\tkinesin heavy chain, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1350\tTb927.1.1350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin heavy chain, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1350\tTb927.1.1350\t\tGO:0005871\tGO_REF:0000002\tEXP\t\tC\tkinesin heavy chain, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1350\tTb927.1.1350\t\tGO:0007018\tGO_REF:0000002\tISA\tUniProtKB:P33176\tP\tkinesin heavy chain, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1370\tTb927.1.1370\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:RRP5_YEAST\tF\trRNA biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1370\tTb927.1.1370\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\trRNA biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1370\tTb927.1.1370\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\trRNA biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1370\tTb927.1.1370\t\tGO:0006364\tGO_REF:0000012\tISA\tUniProtKB:RRP5_YEAST\tP\trRNA biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1380\tTb927.1.1380\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1380\tTb927.1.1380\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1380\tTb927.1.1380\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:CSN8_DROME\tP\tserine/threonine protein phosphatase 2A regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1380\tTb927.1.1380\t\tGO:0008287\tGO_REF:0000012\tISA\tUniProtKB:CSN8_DROME\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1380\tTb927.1.1380\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1380\tTb927.1.1380\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1390\tTb927.1.1390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1420\tTb927.1.1420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1470\tTb927.1.1470\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1470\tTb927.1.1470\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1500\tTb927.1.1500\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1500\tTb927.1.1500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1530\tTb927.1.1530\t\tGO:0004672\tGO_REF:0000012\tISA\tUniProtKB:M3K1_ARATH\tF\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1530\tTb927.1.1530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1530\tTb927.1.1530\t\tGO:0006468\tGO_REF:0000012\tISA\tUniProtKB:Q9VDS9_DROME\tP\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1540\tTb927.1.1540\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTubulin/FtsZ family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1540\tTb927.1.1540\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tTubulin/FtsZ family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1540\tTb927.1.1540\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tTubulin/FtsZ family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1560\tTb927.1.1560\t\tGO:0006887\tGO_REF:0000002\tISA\tUniProtKB:P46459\tP\tvesicular-fusion protein nsf, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1560\tTb927.1.1560\t\tGO:0016887\tGO_REF:0000012\tISA\tUniProtKB:SEC18_YEAST\tF\tvesicular-fusion protein nsf, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1580\tTb927.1.1580\t\tGO:0005507\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tF\tcytochrome c oxidase assembly factor, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1580\tTb927.1.1580\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tcytochrome c oxidase assembly factor, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1580\tTb927.1.1580\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tC\tcytochrome c oxidase assembly factor, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1580\tTb927.1.1580\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcytochrome c oxidase assembly factor, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1580\tTb927.1.1580\t\tGO:0008535\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tP\tcytochrome c oxidase assembly factor, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1600\tTb927.1.1600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpseudouridine synthase TruD, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1600\tTb927.1.1600\t\tGO:0006399\tGO_REF:0000050\tISM\tPANTHER:PTHR13326\tP\tpseudouridine synthase TruD, putative\t\tmRNA\ttaxon:185431\t20140805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1610\tTb927.1.1610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1610\tTb927.1.1610\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1610\tTb927.1.1610\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1610\tTb927.1.1610\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1620\tTb927.1.1620\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:DDX51_DROME\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1620\tTb927.1.1620\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1620\tTb927.1.1620\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1620\tTb927.1.1620\t\tGO:0016070\tGO_REF:0000002\tISA\tUniProtKB:Q9H4E3\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1630\tELOF1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\ttranscription elongation factor 1 homolog\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1630\tELOF1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttranscription elongation factor 1 homolog\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1640\tTb927.1.1640\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1640\tTb927.1.1640\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1660\tTb927.1.1660\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tESCO acetyltransferase domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1660\tTb927.1.1660\t\tGO:0016407\tGO_REF:0000050\tISM\tPANTHER:PTHR11076\tF\tESCO acetyltransferase domain-containing protein\t\tmRNA\ttaxon:185431\t20140806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1670\tTb927.1.1670\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tARM-like helical domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1680\tTb927.1.1680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTranscription elongation factor 1 domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1680\tTb927.1.1680\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tTranscription elongation factor 1 domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1680\tTb927.1.1680\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tTranscription elongation factor 1 domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0004518\tPMID:12649499\tTAS\t\tF\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0004521\tPMID:16963561\tIMP\t\tF\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20171002\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0005739\tPMID:12649499\tIDA\t\tC\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0008270\tPMID:16611942\tTAS\t\tF\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20110628\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0016556\tPMID:12649499\tTAS\t\tP\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0016556\tPMID:16963561\tIMP\t\tP\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20171002\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1690\tKREN1\t\tGO:0045293\tPMID:12649499\tIPI\tGeneDB:Tb927.9.4360\tC\tRNA editing endoribonuclease\tMP90|KREPB1|REN1\tmRNA\ttaxon:185431\t20150310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1700\tTb927.1.1700\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tAATF protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1700\tTb927.1.1700\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tAATF protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1710\tTb927.1.1710\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\ttransmembrane protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1720\tTb927.1.1720\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tcyclophilin 15, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1730\tPAMC1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPolyadenylation mediator complex protein PAMC1, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1730\tPAMC1\t\tGO:0005739\tPMID:26991453\tIDA\t\tC\tPolyadenylation mediator complex protein PAMC1, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1730\tPAMC1\t\tGO:0006397\tPMID:25225332\tIC\tGO:0031019\tP\tPolyadenylation mediator complex protein PAMC1, putative\t\tmRNA\ttaxon:185431\t20160921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1730\tPAMC1\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tPolyadenylation mediator complex protein PAMC1, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1730\tPAMC1\t\tGO:0090615\tPMID:25225332\tIC\tGO:0031019\tP\tPolyadenylation mediator complex protein PAMC1, putative\t\tmRNA\ttaxon:185431\t20170224\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1750\tTb927.1.1750\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1760\tTb927.1.1760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical transmembrane protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1760\tTb927.1.1760\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical transmembrane protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1760\tTb927.1.1760\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical transmembrane protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:0000902\tPMID:29413965\tIMP\t\tP\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20180831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:0003756\tGO_REF:0000002\tISS\tUniProtKB:Q9FVX1\tF\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:0005739\tPMID:29413965\tIDA\t\tC\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20180831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:0005758\tPMID:20826822\tIDA\t\tC\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20170914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:0005758\tPMID:29413965\tIDA\t\tC\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20180831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:0009408\tPMID:23592996\tIEP\t\tP\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:0015036\tGO_REF:0000002\tISS\t\tF\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:0045454\tPMID:29413965\tIMP\t\tP\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20180831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:1900034\tPMID:29413965\tIMP\t\tP\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20180831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1790\tTb927.1.1790\t\tGO:0003723\tGO_REF:0000002\tISS\tPDB:2HWW|PDB:3I8O|PDB:2HWY\tF\thypothetical PIN domain-containing protein, conserved\t\tmRNA\ttaxon:185431\t20140808\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1790\tTb927.1.1790\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical PIN domain-containing protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1790\tTb927.1.1790\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical PIN domain-containing protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.180\tRHS1\t\tGO:0005634\tPMID:12455980\tIDA\t\tC\tretrotransposon hot spot protein 1 (RHS1), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.180\tRHS1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tretrotransposon hot spot protein 1 (RHS1), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1820\tTb927.1.1820\t\tGO:0003723\tGO_REF:0000002\tISS\tPDB:2HWW|PDB:3I8O|PDB:2HWY\tF\thypothetical PIN domain-containing protein\t\tmRNA\ttaxon:185431\t20140808\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1820\tTb927.1.1820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical PIN domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1860\tTb927.1.1860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUncharacterized protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1880\tTb927.1.1880\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tWD40 repeat-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1890\tTb927.1.1890\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tReplication Factor C Subunit 1-related protein\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1890\tTb927.1.1890\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tReplication Factor C Subunit 1-related protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1910\tTb927.1.1910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMORN repeat-containing protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1920\tTb927.1.1920\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1930\tTOR4\t\tGO:0016303\tPMID:20382188\tEXP\t\tF\tTarget of rapamycin kinase 4, putative\t\tmRNA\ttaxon:185431\t20100817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1930\tTOR4\t\tGO:0046854\tPMID:20382188\tEXP\t\tP\tTarget of rapamycin kinase 4, putative\t\tmRNA\ttaxon:185431\t20100817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1960\tJ16\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1960\tJ16\t\tGO:0006457\tGO_REF:0000024\tISS\t\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1960\tJ16\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1980\tTb927.1.1980\t\tGO:0005789\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\t\tmRNA\ttaxon:185431\t20140812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1980\tTb927.1.1980\t\tGO:0006888\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tP\tprotein transport protein YIF1, putative\t\tmRNA\ttaxon:185431\t20140812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1980\tTb927.1.1980\t\tGO:0030134\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\t\tmRNA\ttaxon:185431\t20140812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1980\tTb927.1.1980\t\tGO:0030173\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\t\tmRNA\ttaxon:185431\t20140812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2000\tTb927.1.2000\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2040\tTb927.1.2040\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2110\tCALP1.2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCalpain-like protein 1.2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2110\tCALP1.2\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tCalpain-like protein 1.2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2120\tCALP1.3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCalpain-like protein CALP1.3\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2120\tCALP1.3\t\tGO:0060170\tGO_REF:0000109\tIDA\t\tC\tCalpain-like protein CALP1.3\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2150\tSKCRP1-4\t\tGO:0005737\tPMID:16315106|PMID:19766148\tIDA\t\tC\tcalpain-like cysteine peptidase, Clan CA, family C2\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2160\tSKCRP1-5\t\tGO:0005737\tPMID:19766148\tIDA\t\tC\tSmall kinetoplastid calpain-related protein 1-5\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2160\tSKCRP1-5\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tSmall kinetoplastid calpain-related protein 1-5\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2160\tSKCRP1-5\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tSmall kinetoplastid calpain-related protein 1-5\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2160\tSKCRP1-5\t\tGO:0060170\tGO_REF:0000109\tIDA\t\tC\tSmall kinetoplastid calpain-related protein 1-5\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2160\tSKCRP1-5\t\tGO:0060170\tPMID:19766148\tIDA\t\tC\tSmall kinetoplastid calpain-related protein 1-5\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2190\tTb927.1.2190\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRaptor N-terminal CASPase like domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.220\tRHS1\t\tGO:0005634\tPMID:12455980\tIDA\t\tC\tretrotransposon hot spot protein 1 (RHS1), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.220\tRHS1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tretrotransposon hot spot protein 1 (RHS1), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2200\tZC3H4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2200\tZC3H4\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2200\tZC3H4\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2210\tTb927.1.2210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tnucleosome assembly protein (NAP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2210\tTb927.1.2210\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tnucleosome assembly protein (NAP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2210\tTb927.1.2210\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tnucleosome assembly protein (NAP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2230\tSMP1-1\t\tGO:0044409\tGO_REF:0000024\tISO\tGeneDB:LmjF.20.1310\tP\tsmall myristoylated protein 1-1\tFLAG1-1|SKCRP1-6\tmRNA\ttaxon:185431\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2230\tSMP1-1\t\tGO:0060170\tGO_REF:0000024\tISO\tGeneDB:LmjF.20.1310\tC\tsmall myristoylated protein 1-1\tFLAG1-1|SKCRP1-6\tmRNA\ttaxon:185431\t20100201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2230\tSMP1-1\t\tGO:0060271\tGO_REF:0000024\tISO\tGeneDB:LmjF.20.1310\tP\tsmall myristoylated protein 1-1\tFLAG1-1|SKCRP1-6\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2260\tSMP1-2\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tsmall myristoylated protein 1-2\tFLAG1-2|SKCRP1-7\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2260\tSMP1-2\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tsmall myristoylated protein 1-2\tFLAG1-2|SKCRP1-7\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2260\tSMP1-2\t\tGO:0044409\tGO_REF:0000024\tISO\tGeneDB:LmjF.20.1310\tP\tsmall myristoylated protein 1-2\tFLAG1-2|SKCRP1-7\tmRNA\ttaxon:185431\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2260\tSMP1-2\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tsmall myristoylated protein 1-2\tFLAG1-2|SKCRP1-7\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2260\tSMP1-2\t\tGO:0060170\tGO_REF:0000024\tISO\tGeneDB:LmjF.20.1310\tC\tsmall myristoylated protein 1-2\tFLAG1-2|SKCRP1-7\tmRNA\ttaxon:185431\t20100201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2260\tSMP1-2\t\tGO:0060271\tGO_REF:0000024\tISO\tGeneDB:LmjF.20.1310\tP\tsmall myristoylated protein 1-2\tFLAG1-2|SKCRP1-7\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2310\tTb927.1.2310\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2310\tTb927.1.2310\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2310\tTb927.1.2310\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2320\tCLDP35\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCardiolipin-dependent protein 35kDa\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2320\tCLDP35\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tCardiolipin-dependent protein 35kDa\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2320\tCLDP35\t\tGO:0005739\tPMID:31536395\tIDA\t\tC\tCardiolipin-dependent protein 35kDa\t\tmRNA\ttaxon:185431\t20191115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2330\tTb927.1.2330\t\tGO:0000226\tPMID:2034124\tTAS\t\tP\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2330\tTb927.1.2330\t\tGO:0005200\tPMID:2034124\tTAS\t\tF\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2330\tTb927.1.2330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tbeta tubulin\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2330\tTb927.1.2330\t\tGO:0005874\tPMID:2034124\tTAS\t\tC\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2340\tTb927.1.2340\t\tGO:0000226\tPMID:2034124\tTAS\t\tP\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2340\tTb927.1.2340\t\tGO:0005200\tPMID:2034124\tTAS\t\tF\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2340\tTb927.1.2340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2340\tTb927.1.2340\t\tGO:0005874\tPMID:2034124\tTAS\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2340\tTb927.1.2340\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2340\tTb927.1.2340\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2350\tTb927.1.2350\t\tGO:0000226\tPMID:2034124\tTAS\t\tP\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2350\tTb927.1.2350\t\tGO:0005200\tPMID:2034124\tTAS\t\tF\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2350\tTb927.1.2350\t\tGO:0005874\tPMID:2034124\tTAS\t\tC\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2360\tTb927.1.2360\t\tGO:0000226\tPMID:2034124\tTAS\t\tP\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2360\tTb927.1.2360\t\tGO:0005200\tPMID:2034124\tTAS\t\tF\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2360\tTb927.1.2360\t\tGO:0005874\tPMID:2034124\tTAS\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2360\tTb927.1.2360\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2370\tTb927.1.2370\t\tGO:0000226\tPMID:2034124\tTAS\t\tP\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2370\tTb927.1.2370\t\tGO:0005200\tPMID:2034124\tTAS\t\tF\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2370\tTb927.1.2370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tbeta tubulin\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2370\tTb927.1.2370\t\tGO:0005874\tPMID:2034124\tTAS\t\tC\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2380\tTb927.1.2380\t\tGO:0000226\tPMID:2034124\tTAS\t\tP\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2380\tTb927.1.2380\t\tGO:0005200\tPMID:2034124\tTAS\t\tF\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2380\tTb927.1.2380\t\tGO:0005874\tPMID:2034124\tTAS\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2380\tTb927.1.2380\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2390\tTb927.1.2390\t\tGO:0000226\tPMID:2034124\tTAS\t\tP\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2390\tTb927.1.2390\t\tGO:0005200\tPMID:2034124\tTAS\t\tF\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2390\tTb927.1.2390\t\tGO:0005874\tPMID:2034124\tTAS\t\tC\tbeta tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2400\tTb927.1.2400\t\tGO:0000226\tPMID:2034124\tTAS\t\tP\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2400\tTb927.1.2400\t\tGO:0005200\tPMID:2034124\tTAS\t\tF\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2400\tTb927.1.2400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2400\tTb927.1.2400\t\tGO:0005874\tPMID:2034124\tTAS\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2400\tTb927.1.2400\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\talpha tubulin\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2420\tTb927.1.2420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2420\tTb927.1.2420\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2420\tTb927.1.2420\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2430\tH3\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2430\tH3\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:P49450\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2430\tH3\t\tGO:0005654\tPMID:30550896\tHDA\t\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2430\tH3\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2430\tH3\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2450\tTb927.1.2450\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2450\tTb927.1.2450\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:P49450\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2450\tTb927.1.2450\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2470\tTb927.1.2470\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2470\tTb927.1.2470\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:P49450\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2470\tTb927.1.2470\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2490\tTb927.1.2490\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2490\tTb927.1.2490\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:P49450\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2490\tTb927.1.2490\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2510\tTb927.1.2510\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2510\tTb927.1.2510\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:P49450\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2510\tTb927.1.2510\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2530\tTb927.1.2530\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2530\tTb927.1.2530\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:P49450\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2530\tTb927.1.2530\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2550\tTb927.1.2550\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2550\tTb927.1.2550\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:P49450\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2550\tTb927.1.2550\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2550\tTb927.1.2550\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H3, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2570\tbeta-coP\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:P53618\tP\tcoatomer beta subunit\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2580\tEAP1\t\tGO:0000177\tPMID:12821657\tIPI\tGeneDB:Tb927.7.4670\tC\texosome-associated protein 1\t\tmRNA\ttaxon:185431\t20170512\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2580\tEAP1\t\tGO:0000460\tPMID:12821657\tIMP\t\tP\texosome-associated protein 1\t\tmRNA\ttaxon:185431\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2580\tEAP1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\texosome-associated protein 1\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2580\tEAP1\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\texosome-associated protein 1\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2600\tPUF9\t\tGO:0003729\tGO_REF:0000002\tIPI\tGeneDB:Tb11.02.4400\tF\tpumilio/PUF RNA binding protein 9\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2600\tPUF9\t\tGO:0003729\tPMID:19714224\tIPI\tGeneDB:Tb11.01.6470\tF\tpumilio/PUF RNA binding protein 9\t\tmRNA\ttaxon:185431\t20091021\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2600\tPUF9\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tpumilio/PUF RNA binding protein 9\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2600\tPUF9\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpumilio/PUF RNA binding protein 9\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2600\tPUF9\t\tGO:0043488\tPMID:19714224\tIDA\t\tP\tpumilio/PUF RNA binding protein 9\t\tmRNA\ttaxon:185431\t20091021\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2670\tPF16\t\tGO:0000281\tPMID:16607017\tIMP\t\tP\tparalyzed flagella 16\tSPAG6\tmRNA\ttaxon:185431\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2670\tPF16\t\tGO:0005930\tPMID:16607017\tIDA\t\tC\tparalyzed flagella 16\tSPAG6\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2670\tPF16\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tparalyzed flagella 16\tSPAG6\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2670\tPF16\t\tGO:0035082\tPMID:16607017\tIMP\t\tP\tparalyzed flagella 16\tSPAG6\tmRNA\ttaxon:185431\t20100511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2670\tPF16\t\tGO:0060285\tPMID:16607017\tIMP\t\tP\tparalyzed flagella 16\tSPAG6\tmRNA\ttaxon:185431\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2670\tPF16\t\tGO:0060294\tPMID:16882690\tIMP\t\tP\tparalyzed flagella 16\tSPAG6\tmRNA\ttaxon:185431\t20150731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.270\tTb927.1.270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2700\tTb927.1.2700\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2710\tFCP7\t\tGO:0120118\tGO_REF:0000109\tIDA\t\tC\tFlagella connector protein 7\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2730\tTb927.1.2730\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2730\tTb927.1.2730\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2730\tTb927.1.2730\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2750\tTb927.1.2750\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2760\tTb927.1.2760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2760\tTb927.1.2760\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2760\tTb927.1.2760\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2770\tTZP46\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.280\tTb927.1.280\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF1181), putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2820\tTb927.1.2820\t\tGO:0015224\tGO_REF:0000002\tISM\tPfam:PF03092\tF\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2820\tTb927.1.2820\t\tGO:0015877\tGO_REF:0000002\tISM\tPfam:PF03092\tP\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2820\tTb927.1.2820\t\tGO:0019889\tGO_REF:0000002\tISM\tPfam:PF03092\tP\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2850\tTb927.1.2850\t\tGO:0015224\tGO_REF:0000002\tISM\tPfam:PF03092\tF\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2850\tTb927.1.2850\t\tGO:0015877\tGO_REF:0000002\tISM\tPfam:PF03092\tP\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2850\tTb927.1.2850\t\tGO:0019889\tGO_REF:0000002\tISM\tPfam:PF03092\tP\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2880\tTb927.1.2880\t\tGO:0015224\tGO_REF:0000002\tISM\tPfam:PF03092\tF\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2880\tTb927.1.2880\t\tGO:0015877\tGO_REF:0000002\tISM\tPfam:PF03092\tP\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2880\tTb927.1.2880\t\tGO:0019889\tGO_REF:0000002\tISM\tPfam:PF03092\tP\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.290\tTb927.1.290\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2990\tKRIPP2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 2\tmt-SAF2|PPR2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2990\tKRIPP2\t\tGO:0005739\tPMID:17646387\tIDA\t\tC\tMitoribosomal SSU assembly factor 2\tmt-SAF2|PPR2\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2990\tKRIPP2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 2\tmt-SAF2|PPR2\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2990\tKRIPP2\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitoribosomal SSU assembly factor 2\tmt-SAF2|PPR2\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.30\tTb927.1.30\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.30\tTb927.1.30\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3000\tTb927.1.3000\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tamidohydrolase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3000\tTb927.1.3000\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamidohydrolase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3000\tTb927.1.3000\t\tGO:0006508\tGO_REF:0000012\tISA\tUniProtKB:ILL2_ARATH\tP\tamidohydrolase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3000\tTb927.1.3000\t\tGO:0016787\tGO_REF:0000012\tISA\tUniProtKB:ILL2_ARATH\tF\tamidohydrolase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3000\tTb927.1.3000\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tamidohydrolase, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3010\tPAMC4\t\tGO:0003729\tPMID:18073385\tEXP\t\tF\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3010\tPAMC4\t\tGO:0005739\tPMID:18073385\tEXP\t\tC\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3010\tPAMC4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3010\tPAMC4\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3010\tPAMC4\t\tGO:0006397\tPMID:18073385\tEXP\t\tP\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3010\tPAMC4\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3010\tPAMC4\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3010\tPAMC4\t\tGO:0090615\tPMID:25225332\tIC\tGO:0005739|GO:0006397\tP\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20170227\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3030\tKREL2\t\tGO:0003972\tPMID:11233974\tTAS\t\tF\tKREL2\tMP48|REL2\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3030\tKREL2\t\tGO:0005739\tPMID:11233974\tIDA\t\tC\tKREL2\tMP48|REL2\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3030\tKREL2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tKREL2\tMP48|REL2\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3030\tKREL2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tKREL2\tMP48|REL2\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3030\tKREL2\t\tGO:0016556\tPMID:11134327\tTAS\t\tP\tKREL2\tMP48|REL2\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3030\tKREL2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tKREL2\tMP48|REL2\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3030\tKREL2\t\tGO:0031019\tPMID:20018860\tIDA\t\tC\tKREL2\tMP48|REL2\tmRNA\ttaxon:185431\t20100208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3030\tKREL2\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tKREL2\tMP48|REL2\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3030\tKREL2\t\tGO:0045293\tPMID:11134327\tIDA\t\tC\tKREL2\tMP48|REL2\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3040\tTb927.1.3040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3040\tTb927.1.3040\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3050\tTb927.1.3050\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\ttRNA (Uracil-5-)-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3070\tTb927.1.3070\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3070\tTb927.1.3070\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3070\tTb927.1.3070\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3070\tTb927.1.3070\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3110\tTb927.1.3110\t\tGO:0005483\tGO_REF:0000012\tISA\tUniProtKB:SNAP_DROME\tF\tsoluble N-ethylmaleimide sensitive factor (NSF) attachment protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3110\tTb927.1.3110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsoluble N-ethylmaleimide sensitive factor (NSF) attachment protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3110\tTb927.1.3110\t\tGO:0006886\tGO_REF:0000002\tISM\tInterPro:IPR000744\tP\tsoluble N-ethylmaleimide sensitive factor (NSF) attachment protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3110\tTb927.1.3110\t\tGO:0012505\tPMID:29781112\tIDA\t\tC\tsoluble N-ethylmaleimide sensitive factor (NSF) attachment protein, putative\t\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3120\tTb927.1.3120\t\tGO:0004197\tGO_REF:0000002\tISA\tUniProtKB:Q03018\tF\tcysteine peptidase, Clan CD, family C50, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3120\tTb927.1.3120\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tcysteine peptidase, Clan CD, family C50, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3120\tTb927.1.3120\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcysteine peptidase, Clan CD, family C50, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3130\tTb927.1.3130\t\tGO:0004672\tGO_REF:0000012\tISA\tUniProtKB:GIN4_YEAST\tF\tAGC/RSK family serine/threonine kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3130\tTb927.1.3130\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAGC/RSK family serine/threonine kinase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3130\tTb927.1.3130\t\tGO:0006468\tGO_REF:0000002\tISA\tUniProtKB:P51957\tP\tAGC/RSK family serine/threonine kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3150\tTb927.1.3150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3170\tTb927.1.3170\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tCHORD, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3170\tTb927.1.3170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCHORD, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3170\tTb927.1.3170\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCHORD, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3180\tS11\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S11, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3180\tS11\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S11, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3180\tS11\t\tGO:0005737\tPMID:30550896\tHDA\t\tC\t40S ribosomal protein S11, putative\t\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3180\tS11\t\tGO:0005840\tGO_REF:0000002\tISA\tUniProtKB:P62280\tC\t40S ribosomal protein S11, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3180\tS11\t\tGO:0006412\tGO_REF:0000002\tISA\tUniProtKB:P62280\tP\t40S ribosomal protein S11, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3200\tSGT1\t\tGO:0000151\tGO_REF:0000012\tISA\tUniProtKB:SGT1_YEAST\tC\tSuppressor of G2 allele of SKP1, putative\t\tmRNA\ttaxon:185431\t20140818\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3200\tSGT1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSuppressor of G2 allele of SKP1, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3200\tSGT1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSuppressor of G2 allele of SKP1, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3200\tSGT1\t\tGO:0009408\tPMID:23592996\tIEP\t\tP\tSuppressor of G2 allele of SKP1, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3220\tTb927.1.3220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTBC1 domain family member 20/GTPase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3230\tTb927.1.3230\t\tGO:0005524\tGO_REF:0000012\tISA\tUniProtKB:CD48D_ARATH\tF\tcell division cycle protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3230\tTb927.1.3230\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tcell division cycle protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3270\tTb927.1.3270\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3280\tTb927.1.3280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tseptum formation protein MAF homologue, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3300\tTb927.1.3300\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tzinc-binding phosphatase, putative\t\tmRNA\ttaxon:185431\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3310\tTb927.1.3310\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3360\tTb927.1.3360\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3390\tTb927.1.3390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEukaryotic protein of unknown function (DUF866), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3390\tTb927.1.3390\t\tGO:0009408\tPMID:23592996\tIEP\t\tP\tEukaryotic protein of unknown function (DUF866), putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3390\tTb927.1.3390\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tEukaryotic protein of unknown function (DUF866), putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3390\tTb927.1.3390\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tEukaryotic protein of unknown function (DUF866), putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3400\tBDF6\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tBromodomain factor 6\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3400\tBDF6\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tBromodomain factor 6\t\tmRNA\ttaxon:185431\t20220207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3400\tBDF6\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tBromodomain factor 6\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3400\tBDF6\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tBromodomain factor 6\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3410\tTb927.1.3410\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3410\tTb927.1.3410\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3410\tTb927.1.3410\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3410\tTb927.1.3410\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3450\tTb927.1.3450\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3450\tTb927.1.3450\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3450\tTb927.1.3450\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.370\tTb927.1.370\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.370\tTb927.1.370\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3750\tTb927.1.3750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3760\tTb927.1.3760\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3800\tPOMP18\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPresent in the outer mitochondrial membrane proteome 18\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3800\tPOMP18\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 18\t\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0015991\tGO_REF:0000012\tISA\tUniProtKB:VATF_YEAST\tP\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0046961\tGO_REF:0000012\tISA\tUniProtKB:VATF_YEAST\tF\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3830\tPGI\t\tGO:0004347\tPMID:2792108\tTAS\t\tF\tglucose-6-phosphate isomerase, glycosomal\t\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3830\tPGI\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglucose-6-phosphate isomerase, glycosomal\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3830\tPGI\t\tGO:0006094\tPMID:2792108\tTAS\t\tP\tglucose-6-phosphate isomerase, glycosomal\t\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3830\tPGI\t\tGO:0006096\tPMID:2792108\tTAS\t\tP\tglucose-6-phosphate isomerase, glycosomal\t\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3830\tPGI\t\tGO:0020015\tPMID:2792108\tTAS\t\tC\tglucose-6-phosphate isomerase, glycosomal\t\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3830\tPGI\t\tGO:0020015\tPMID:2940090\tIDA\t\tC\tglucose-6-phosphate isomerase, glycosomal\t\tmRNA\ttaxon:185431\t20170612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3830\tPGI\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tglucose-6-phosphate isomerase, glycosomal\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3850\tTb927.1.3850\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tSec61beta family, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3850\tTb927.1.3850\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tSec61beta family, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3880\tTb927.1.3880\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tFusaric acid resistance protein-like, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3910\tCDC23\t\tGO:0005680\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tC\tAnaphase-promoting complex subunit CDC23\t\tmRNA\ttaxon:185431\t20180123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3910\tCDC23\t\tGO:0007049\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tP\tAnaphase-promoting complex subunit CDC23\t\tmRNA\ttaxon:185431\t20180123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3940\tTb927.1.3940\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3950\tALAT\t\tGO:0004021\tPMID:19443056\tIDA\t\tF\talanine aminotransferase\t\tmRNA\ttaxon:185431\t20090630\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3950\tALAT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\talanine aminotransferase\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3950\tALAT\t\tGO:0005829\tPMID:19443056\tIDA\t\tC\talanine aminotransferase\t\tmRNA\ttaxon:185431\t20090518\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3950\tALAT\t\tGO:0006524\tPMID:19443056\tIDA\t\tP\talanine aminotransferase\t\tmRNA\ttaxon:185431\t20090630\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3950\tALAT\t\tGO:0006560\tPMID:19895576\tIMP\t\tP\talanine aminotransferase\t\tmRNA\ttaxon:185431\t20091116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3950\tALAT\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\talanine aminotransferase\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4010\tTb927.1.4010\t\tGO:0003896\tPMID:21257796\tIDA\t\tF\tprimase 2\t\tmRNA\ttaxon:185431\t20120425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4010\tTb927.1.4010\t\tGO:0005739\tPMID:21257796\tIDA\t\tC\tprimase 2\t\tmRNA\ttaxon:185431\t20120425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4010\tTb927.1.4010\t\tGO:0006260\tPMID:21257796\tIDA\t\tP\tprimase 2\t\tmRNA\ttaxon:185431\t20120425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4010\tTb927.1.4010\t\tGO:0016787\tPMID:21257796\tIDA\t\tF\tprimase 2\t\tmRNA\ttaxon:185431\t20120425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4020\tTb927.1.4020\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4020\tTb927.1.4020\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4020\tTb927.1.4020\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4020\tTb927.1.4020\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4040\tTb927.1.4040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4050\tTb927.1.4050\t\tGO:0004722\tGO_REF:0000012\tISA\tUniProtKB:RDGC_DROME\tF\tprotein phosphatase with EF-Hand domains (PPEF)\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4050\tTb927.1.4050\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase with EF-Hand domains (PPEF)\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4050\tTb927.1.4050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase with EF-Hand domains (PPEF)\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4050\tTb927.1.4050\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:RDGC_DROME\tP\tprotein phosphatase with EF-Hand domains (PPEF)\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4050\tTb927.1.4050\t\tGO:0008287\tGO_REF:0000012\tISA\tUniProtKB:PPP5_ARATH\tC\tprotein phosphatase with EF-Hand domains (PPEF)\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4100\tCOXIV\t\tGO:0004129\tPMID:12467979\tTAS\t\tF\tcytochrome oxidase subunit IV\t\tmRNA\ttaxon:185431\t20100715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4100\tCOXIV\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tcytochrome oxidase subunit IV\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4100\tCOXIV\t\tGO:0005739\tPMID:20660476\tISM\t\tC\tcytochrome oxidase subunit IV\t\tmRNA\ttaxon:185431\t20130820\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4100\tCOXIV\t\tGO:0005751\tPMID:12467979\tISO\tGeneDB:LtaP12.0690\tC\tcytochrome oxidase subunit IV\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4100\tCOXIV\t\tGO:0055114\tPMID:12467979\tTAS\t\tP\tcytochrome oxidase subunit IV\t\tmRNA\ttaxon:185431\t20100715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4140\tBBS5\t\tGO:0020018\tPMID:26721397\tIDA\t\tC\tBardet-Biedl syndrome 5 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4140\tBBS5\t\tGO:0030665\tPMID:26721397\tIDA\t\tC\tBardet-Biedl syndrome 5 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4140\tBBS5\t\tGO:0033572\tPMID:26721397\tIMP\t\tP\tBardet-Biedl syndrome 5 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4140\tBBS5\t\tGO:0034464\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\tBardet-Biedl syndrome 5 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4140\tBBS5\tNOT\tGO:0060271\tPMID:26721397\tIMP\t\tP\tBardet-Biedl syndrome 5 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4140\tBBS5\tNOT\tGO:0060285\tPMID:26721397\tIMP\t\tP\tBardet-Biedl syndrome 5 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4160\tTb927.1.4160\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.420\tRHS5\t\tGO:0005634\tPMID:12455980\tIDA\t\tC\tretrotransposon hot spot protein 5 (RHS5), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4220\tRH2B\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tYdr279p protein family (RNase H2 complex component), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4220\tRH2B\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tYdr279p protein family (RNase H2 complex component), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4220\tRH2B\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tYdr279p protein family (RNase H2 complex component), putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4220\tRH2B\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tYdr279p protein family (RNase H2 complex component), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4220\tRH2B\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tYdr279p protein family (RNase H2 complex component), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4220\tRH2B\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tYdr279p protein family (RNase H2 complex component), putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4230\tTb927.1.4230\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4250\tTb927.1.4250\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4250\tTb927.1.4250\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4280\tTb927.1.4280\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4300\tJ17\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4300\tJ17\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4300\tJ17\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4310\tFAZ2\t\tGO:0005515\tPMID:25972344\tIPI\tGeneDB:Tb927.4.3740|GeneDB:Tb927.9.13820|GeneDB:Tb927.4.2080\tF\tFlagellum attachment zone protein 2\t\tmRNA\ttaxon:185431\t20151210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4310\tFAZ2\t\tGO:0005856\tPMID:25972344\tIDA\t\tC\tFlagellum attachment zone protein 2\t\tmRNA\ttaxon:185431\t20151210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4310\tFAZ2\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 2\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4310\tFAZ2\t\tGO:0120119\tPMID:25736289\tIDA\t\tC\tFlagellum attachment zone protein 2\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4310\tFAZ2\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 2\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4410\tTb927.1.4410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4420\tTb927.1.4420\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4420\tTb927.1.4420\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4420\tTb927.1.4420\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:MDR1B_MOUSE\tP\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4420\tTb927.1.4420\t\tGO:0042626\tGO_REF:0000012\tISA\tUniProtKB:AB9B_ARATH\tF\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4420\tTb927.1.4420\t\tGO:0043190\tGO_REF:0000012\tISA\tUniProtKB:AB9B_ARATH\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4450\tTb927.1.4450\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcalcium-activated potassium channel, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4450\tTb927.1.4450\t\tGO:0005886\tPMID:25868728\tIC\tGO:0015269\tC\tcalcium-activated potassium channel, putative\t\tmRNA\ttaxon:185431\t20170227\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4470\tTZP48\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4470\tTZP48\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4470\tTZP48\t\tGO:0036064\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4480\tTb927.1.4480\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tWD repeat and HMG-box DNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4480\tTb927.1.4480\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tWD repeat and HMG-box DNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4480\tTb927.1.4480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tWD repeat and HMG-box DNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4490\tNAT2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tN-acetyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4490\tNAT2\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tN-acetyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4490\tNAT2\t\tGO:0016401\tGO_REF:0000011\tISM\tPfam:PF00583\tF\tN-acetyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4490\tNAT2\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tN-acetyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4500\tTb927.1.4500\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSNARE associated Golgi protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4500\tTb927.1.4500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSNARE associated Golgi protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4500\tTb927.1.4500\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSNARE associated Golgi protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4520\tTb927.1.4520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tZinc finger, C3HC4 type (RING finger), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4520\tTb927.1.4520\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tZinc finger, C3HC4 type (RING finger), putative\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4540\tCFB1A\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tcyclin-like F-box protein 1A\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4560\tCFB1B\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcyclin-like F-box protein 1B\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4580\tCFB1C\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcyclin-like F-box protein 1C\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4600\tCFB1D\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcyclin-like F-box protein 1D\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4630\tCFB1E\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcyclin-like F-box protein 1E\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4650\tCFB2\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tcyclin-like F-box protein 2\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4650\tCFB2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcyclin-like F-box protein 2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4650\tCFB2\tNOT\tGO:0006264\tPMID:17920137\tIMP\t\tP\tcyclin-like F-box protein 2\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4650\tCFB2\tNOT\tGO:0044782\tPMID:17920137\tIMP\t\tP\tcyclin-like F-box protein 2\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4650\tCFB2\t\tGO:1902412\tPMID:17920137\tIMP\t\tP\tcyclin-like F-box protein 2\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4680\tKKIP6\t\tGO:0000776\tPMID:28034897\tIDA\t\tC\tKinetochore interacting protein 6\t\tmRNA\ttaxon:185431\t20170202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4680\tKKIP6\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tKinetochore interacting protein 6\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0003729\tPMID:30563898\tIDA\t\tF\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20200412\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0005515\tPMID:27998975\tIPI\tGeneDB:Tb927.10.3560\tF\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20170503\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0006479\tGO_REF:0000002\tISA\tUniProtKB:Q99873\tP\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0009267\tPMID:30563898\tIMP\t\tP\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20200412\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0016273\tPMID:16198009\tIDA\t\tF\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20100602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0016274\tPMID:16198009\tIDA\t\tF\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20100602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0019222\tPMID:30563898\tIMP\t\tP\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20200412\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0019919\tPMID:16198009\tIDA\t\tP\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20100602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0045821\tPMID:30563898\tIMP\t\tP\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20200412\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:2001157\tPMID:30563898\tIMP\t\tP\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20200412\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.470\tTb927.1.470\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF1181), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4700\tTb927.1.4700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4710\tTb927.1.4710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4720\tSET3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSET domain protein 3\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4720\tSET3\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 3\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4730\tRH2C\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRibonuclease H2 non-catalytic subunit (Ylr154p-like), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4740\tTb927.1.4740\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFAM91 N-terminus/FAM91 C-terminus, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4760\tTb927.1.4760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVacuolar sorting protein 39 domain 1/Vacuolar sorting protein 39 domain 2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4780\tTb927.1.4780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tserine peptidase, Clan SC, Family S9D\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.480\tTb927.1.480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4800\tTb927.1.4800\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4830\tPLA1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tphospholipase A1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4830\tPLA1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphospholipase A1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4830\tPLA1\t\tGO:0006657\tGO_REF:0000002\tIMP\t\tP\tphospholipase A1\t\tmRNA\ttaxon:185431\t20100907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4830\tPLA1\t\tGO:0008970\tGO_REF:0000002\tIMP\t\tF\tphospholipase A1\t\tmRNA\ttaxon:185431\t20100907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4830\tPLA1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tphospholipase A1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4870\tTb927.1.4870\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4890\tTb927.1.4890\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.490\tTb927.1.490\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4900\tTb927.1.4900\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4910\tTb927.1.4910\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4970\tTb927.1.4970\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5000\tTb927.1.5000\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5000\tTb927.1.5000\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5030\tFAZ37\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 37\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5080\tTb927.1.5080\t\tGO:0016021\tPMID:1672441\tTAS\t\tC\texpression site-associated gene 9 (ESAG9) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5100\tTb927.1.5100\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5110\tTb927.1.5110\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5120\tTb927.1.5120\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5170\tTb927.1.5170\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5170\tTb927.1.5170\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5170\tTb927.1.5170\t\tGO:0044403\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5170\tTb927.1.5170\t\tGO:0046789\tPMID:6811137\tTAS\t\tF\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5200\tTb927.1.5200\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5220\tTb927.1.5220\t\tGO:0016021\tPMID:1672441\tTAS\t\tC\texpression site-associated gene 9 (ESAG9) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5240\tTb927.1.5240\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.530\tTb927.1.530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.530\tTb927.1.530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5300\tTb927.1.5300\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5300\tTb927.1.5300\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5330\tTb927.1.5330\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5330\tTb927.1.5330\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.540\tRPC128\t\tGO:0003899\tGO_REF:0000012\tISA\tUniProtKB:RPC2_YEAST\tF\tDNA-directed RNA polymerase III, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.540\tRPC128\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA-directed RNA polymerase III, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.540\tRPC128\t\tGO:0005666\tGO_REF:0000012\tISA\tUniProtKB:RPC2_YEAST\tC\tDNA-directed RNA polymerase III, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.540\tRPC128\t\tGO:0006383\tGO_REF:0000012\tISA\tUniProtKB:RPC2_YEAST\tP\tDNA-directed RNA polymerase III, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.560\tTb927.1.560\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.560\tTb927.1.560\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.560\tTb927.1.560\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.570\tDOT1B\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tHistone H3-K76 methyltransferase\t\tmRNA\ttaxon:185431\t20220203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.570\tDOT1B\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tHistone H3-K76 methyltransferase\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.570\tDOT1B\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tHistone H3-K76 methyltransferase\t\tmRNA\ttaxon:185431\t20220203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.570\tDOT1B\t\tGO:0018024\tPMID:16916638\tIDA\t\tF\tHistone H3-K76 methyltransferase\t\tmRNA\ttaxon:185431\t20090717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.570\tDOT1B\t\tGO:0020033\tPMID:18597556\tIMP\t\tP\tHistone H3-K76 methyltransferase\t\tmRNA\ttaxon:185431\t20090717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.570\tDOT1B\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tHistone H3-K76 methyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.570\tDOT1B\t\tGO:0051726\tPMID:16916638\tIMP\t\tP\tHistone H3-K76 methyltransferase\t\tmRNA\ttaxon:185431\t20090717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.580\tTb927.1.580\t\tGO:0015114\tGO_REF:0000012\tISA\tUniProtKB:PHT21_ARATH\tF\tphosphate-repressible phosphate permease, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.600\tTb927.1.600\t\tGO:0015114\tGO_REF:0000012\tISA\tUniProtKB:PHT21_ARATH\tF\tphosphate-repressible phosphate permease, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.630\tASF1A\t\tGO:0003682\tGO_REF:0000002\tISA\tUniProtKB:Q9Y294\tF\thistone chaperone ASF1A\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.630\tASF1A\t\tGO:0005515\tPMID:17940067\tIPI\tGeneDB:Tb927.4.5180\tF\thistone chaperone ASF1A\t\tmRNA\ttaxon:185431\t20160727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.630\tASF1A\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:Q9Y294\tC\thistone chaperone ASF1A\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.630\tASF1A\t\tGO:0005634\tPMID:24322299\tIDA\t\tC\thistone chaperone ASF1A\t\tmRNA\ttaxon:185431\t20160727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.630\tASF1A\t\tGO:0005829\tPMID:24322299\tIDA\t\tC\thistone chaperone ASF1A\t\tmRNA\ttaxon:185431\t20160727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.630\tASF1A\t\tGO:0031936\tGO_REF:0000002\tISA\tUniProtKB:Q9Y294\tP\thistone chaperone ASF1A\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.630\tASF1A\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thistone chaperone ASF1A\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.630\tASF1A\t\tGO:0042393\tPMID:24322299\tIPI\tGeneDB:Tb927.1.2510|GeneDB:Tb927.5.4170|GeneDB:Tb927.10.15350|GeneDB:Tb927.2.2670\tF\thistone chaperone ASF1A\t\tmRNA\ttaxon:185431\t20160727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.640\tBRCA2\t\tGO:0000278\tPMID:23222131\tIMP\t\tP\tBRCA2\t\tmRNA\ttaxon:185431\t20200410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.640\tBRCA2\t\tGO:0003684\tPMID:18430140\tIDA\t\tF\tBRCA2\t\tmRNA\ttaxon:185431\t20110912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.640\tBRCA2\t\tGO:0005634\tPMID:23222131\tIDA\t\tC\tBRCA2\t\tmRNA\ttaxon:185431\t20200410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.640\tBRCA2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tBRCA2\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.640\tBRCA2\t\tGO:0005634\tPMID:18430140\tIDA\t\tC\tBRCA2\t\tmRNA\ttaxon:185431\t20110912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.640\tBRCA2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tBRCA2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.640\tBRCA2\t\tGO:0006281\tPMID:23222131\tIMP\t\tP\tBRCA2\t\tmRNA\ttaxon:185431\t20200410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.640\tBRCA2\t\tGO:0020033\tPMID:18430140\tIDA\t\tP\tBRCA2\t\tmRNA\ttaxon:185431\t20110912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.640\tBRCA2\t\tGO:0036297\tPMID:31082713\tIMP\t\tP\tBRCA2\t\tmRNA\ttaxon:185431\t20190711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.650\tTb927.1.650\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.650\tTb927.1.650\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.650\tTb927.1.650\t\tGO:0006325\tGO_REF:0000050\tISM\tPDB:2F5J|PDB:2Y0N\tP\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20140725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.670\tTb927.1.670\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.670\tTb927.1.670\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.670\tTb927.1.670\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tconserved protein, unknown function\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.70\tRHS4\t\tGO:0005634\tPMID:12455980\tIDA\t\tC\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.70\tRHS4\t\tGO:0005634\tPMID:30544263\tIDA\t\tC\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.70\tRHS4\t\tGO:0006406\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.70\tRHS4\t\tGO:0042789\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.70\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.700\tPGKC\t\tGO:0004618\tPMID:7770090\tTAS\t\tF\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.700\tPGKC\t\tGO:0006096\tPMID:7770090\tTAS\t\tP\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.700\tPGKC\t\tGO:0020015\tGO_REF:0000002\tIDA\t\tC\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.700\tPGKC\t\tGO:0020015\tPMID:7770090\tTAS\t\tC\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.710\tPGKB\t\tGO:0004618\tPMID:7770090\tTAS\t\tF\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.710\tPGKB\t\tGO:0005737\tPMID:7770090\tTAS\t\tC\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.710\tPGKB\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.710\tPGKB\t\tGO:0006096\tPMID:7770090\tTAS\t\tP\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.710\tPGKB\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.720\tPGKA\t\tGO:0004618\tPMID:7770090\tTAS\t\tF\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.720\tPGKA\t\tGO:0006096\tPMID:7770090\tTAS\t\tP\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.720\tPGKA\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.720\tPGKA\t\tGO:0020015\tPMID:7770090\tTAS\t\tC\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.720\tPGKA\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tphosphoglycerate kinase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.730\tTb927.1.730\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.730\tTb927.1.730\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.730\tTb927.1.730\t\tGO:0005747\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20140725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.730\tTb927.1.730\t\tGO:0006915\tGO_REF:0000050\tISM\tPDB:2A5Y|PDB:1Z6T\tP\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20140725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.740\tTb927.1.740\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tphosphatidylinositol-4-phosphate 5-kinase related\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.740\tTb927.1.740\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tphosphatidylinositol-4-phosphate 5-kinase related\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.740\tTb927.1.740\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tphosphatidylinositol-4-phosphate 5-kinase related\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.750\tTb927.1.750\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tMetal-binding domain-containing protein\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.760\tTb927.1.760\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\twd40 repeat domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.780\tTb927.1.780\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat-containing protein\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.790\tTb927.1.790\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical transmembrane protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.800\tTb927.1.800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical transmembrane protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.800\tTb927.1.800\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical transmembrane protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.800\tTb927.1.800\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical transmembrane protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.820\tTb927.1.820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkelch domain-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.840\tTb927.1.840\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\ttransmembrane protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.870\tDHSp\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.870\tDHSp\t\tGO:0008612\tGO_REF:0000012\tISA\tUniProtKB:DHYS_DROME\tP\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.880\tMDN1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tMidasin, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.990\tTb927.1.990\t\tGO:0005516\tGO_REF:0000050\tISM\tInterPro:IPR026150\tF\tEnkuring domain-containig protein\t\tmRNA\ttaxon:185431\t20140730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.990\tTb927.1.990\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tEnkuring domain-containig protein\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10010\tMRT4\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF00466\tF\tmRNA turnover protein 4 homolog, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10010\tMRT4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tmRNA turnover protein 4 homolog, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10010\tMRT4\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tmRNA turnover protein 4 homolog, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10010\tMRT4\t\tGO:0005840\tGO_REF:0000011\tISM\tPfam:PF00466\tC\tmRNA turnover protein 4 homolog, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10010\tMRT4\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF00466\tP\tmRNA turnover protein 4 homolog, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10020\tRABEX5\t\tGO:0000910\tPMID:29603841\tIMP\t\tP\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10020\tRABEX5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10020\tRABEX5\t\tGO:0005768\tPMID:29603841\tIDA\t\tC\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10020\tRABEX5\t\tGO:0005794\tPMID:29603841\tIDA\t\tC\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10020\tRABEX5\t\tGO:0006897\tPMID:29603841\tIMP\t\tP\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10020\tRABEX5\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10020\tRABEX5\t\tGO:0020016\tPMID:29603841\tIDA\t\tC\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10030\tTb927.10.10030\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10030\tTb927.10.10030\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10040\tTb927.10.10040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10040\tTb927.10.10040\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10040\tTb927.10.10040\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10050\tTb927.10.10050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10050\tTb927.10.10050\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10070\tTb927.10.10070\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10090\tCMF14\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tComponent of motile flagella 14\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10090\tCMF14\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tComponent of motile flagella 14\t\tmRNA\ttaxon:185431\t20090429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1010\tTb927.10.1010\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10100\tTb927.10.10100\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10110\tTb927.10.10110\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPIG-P, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10110\tTb927.10.10110\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tPIG-P, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10120\tTb927.10.10120\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10120\tTb927.10.10120\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10120\tTb927.10.10120\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10130\tREMC1\t\tGO:0003723\tPMID:22396527\tIDA\t\tF\tmitochondrial RNA binding complex 1 subunit\tMRB10130|PAMC1\tmRNA\ttaxon:185431\t20120910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10130\tREMC1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB10130|PAMC1\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10130\tREMC1\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB10130|PAMC1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10130\tREMC1\t\tGO:0016554\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tMRB10130|PAMC1\tmRNA\ttaxon:185431\t20120910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10130\tREMC1\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB10130|PAMC1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10130\tREMC1\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB10130|PAMC1\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10130\tREMC1\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10830\tC\tmitochondrial RNA binding complex 1 subunit\tMRB10130|PAMC1\tmRNA\ttaxon:185431\t20160921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10130\tREMC1\t\tGO:0048255\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tMRB10130|PAMC1\tmRNA\ttaxon:185431\t20120910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10130\tREMC1\t\tGO:0090615\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10830\tP\tmitochondrial RNA binding complex 1 subunit\tMRB10130|PAMC1\tmRNA\ttaxon:185431\t20160921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10150\tTb927.10.10150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10160\tKPAF4\t\tGO:0005739\tPMID:17646387\tISM\t\tC\tKinetoplast polyadenylation factor 4\t\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10160\tKPAF4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tKinetoplast polyadenylation factor 4\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10160\tKPAF4\t\tGO:0005739\tPMID:30635574\tIDA\t\tC\tKinetoplast polyadenylation factor 4\t\tmRNA\ttaxon:185431\t20190819\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10160\tKPAF4\t\tGO:0005759\tPMID:30635574\tIDA\t\tC\tKinetoplast polyadenylation factor 4\t\tmRNA\ttaxon:185431\t20190819\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10160\tKPAF4\t\tGO:0008143\tPMID:30635574\tIDA\t\tF\tKinetoplast polyadenylation factor 4\t\tmRNA\ttaxon:185431\t20190819\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10160\tKPAF4\t\tGO:0090616\tPMID:32614436\tIMP\t\tP\tKinetoplast polyadenylation factor 4\t\tmRNA\ttaxon:185431\t20210721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10170\tPRP46\t\tGO:0000398\tPMID:20592024\tIPI\tGeneDB:Tb927.2.5240\tP\tpre-mRNA splicing factor 46, putative\t\tmRNA\ttaxon:185431\t20160815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10170\tPRP46\t\tGO:0000974\tPMID:20592024\tIPI\tGeneDB:Tb927.2.5240\tC\tpre-mRNA splicing factor 46, putative\t\tmRNA\ttaxon:185431\t20160815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10170\tPRP46\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpre-mRNA splicing factor 46, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10170\tPRP46\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tpre-mRNA splicing factor 46, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10180\tTb927.10.10180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMiro-like protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10190\tTb927.10.10190\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLeucine-rich repeat domain containing protein\tGU1\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10200\tTb927.10.10200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10250\tEP2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEP2 procyclin\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10250\tEP2\t\tGO:0009986\tPMID:11171982\tTAS\t\tC\tEP2 procyclin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10250\tEP2\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tEP2 procyclin\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10250\tEP2\t\tGO:0016020\tPMID:8420963\tIDA\t\tC\tEP2 procyclin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10250\tEP2\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tEP2 procyclin\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10250\tEP2\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tEP2 procyclin\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10260\tEP1\t\tGO:0009986\tPMID:11171982\tTAS\t\tC\tEP1 procyclin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10260\tEP1\t\tGO:0016020\tPMID:11171982\tTAS\t\tC\tEP1 procyclin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10270\tTb927.10.10270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10280\tMARP2\t\tGO:0005737\tPMID:7986649\tIC\tGO:0008017\tC\tMicrotubule-associated repetitive protein 2\tBBP268\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10280\tMARP2\t\tGO:0005856\tPMID:29781112\tIDA\t\tC\tMicrotubule-associated repetitive protein 2\tBBP268\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10280\tMARP2\t\tGO:0008017\tPMID:7986649\tIDA\t\tF\tMicrotubule-associated repetitive protein 2\tBBP268\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10280\tMARP2\t\tGO:0036064\tPMID:29781112\tIDA\t\tC\tMicrotubule-associated repetitive protein 2\tBBP268\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10280\tMARP2\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tMicrotubule-associated repetitive protein 2\tBBP268\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10290\tTb927.10.10290\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1030\tCBP1A\t\tGO:0004185\tGO_REF:0000011\tISM\tInterPro:IPR001563\tF\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1030\tCBP1A\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001563\tP\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1030\tCBP1A\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10300\tTb927.10.10300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10300\tTb927.10.10300\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10310\tTb927.10.10310\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10320\tTb927.10.10320\t\tGO:0003777\tGO_REF:0000012\tISA\tUniProtKB:Q15763\tF\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10320\tTb927.10.10320\t\tGO:0005875\tGO_REF:0000012\tISA\tUniProtKB:DYLT_DROME\tC\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10320\tTb927.10.10320\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10320\tTb927.10.10320\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10320\tTb927.10.10320\t\tGO:0007017\tGO_REF:0000012\tISA\tUniProtKB:DYLT1_MOUSE\tP\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10320\tTb927.10.10320\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10330\tCDC27\t\tGO:0000090\tPMID:15994309\tIMP\t\tP\tAnaphase-promoting complex subunit CDC27\t\tmRNA\ttaxon:185431\t20200403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10330\tCDC27\t\tGO:0005680\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tC\tAnaphase-promoting complex subunit CDC27\t\tmRNA\ttaxon:185431\t20180123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10330\tCDC27\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAnaphase-promoting complex subunit CDC27\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10330\tCDC27\t\tGO:0007049\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tP\tAnaphase-promoting complex subunit CDC27\t\tmRNA\ttaxon:185431\t20180123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10330\tCDC27\t\tGO:0007091\tPMID:15994309\tIMP\t\tP\tAnaphase-promoting complex subunit CDC27\t\tmRNA\ttaxon:185431\t20200403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10330\tCDC27\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tAnaphase-promoting complex subunit CDC27\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10340\tSMC2\t\tGO:0000070\tGO_REF:0000012\tISA\tUniProtKB:O42649\tP\tstructural maintenance of chromosome 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10340\tSMC2\t\tGO:0000278\tGO_REF:0000012\tISA\tUniProtKB:Q9V3A7\tP\tstructural maintenance of chromosome 2, putative\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10340\tSMC2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003395\tF\tstructural maintenance of chromosome 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10340\tSMC2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tstructural maintenance of chromosome 2, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10340\tSMC2\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR003395\tC\tstructural maintenance of chromosome 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10340\tSMC2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tstructural maintenance of chromosome 2, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10340\tSMC2\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tstructural maintenance of chromosome 2, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10340\tSMC2\t\tGO:0008278\tGO_REF:0000012\tISA\tUniProtKB:O42649\tC\tstructural maintenance of chromosome 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10350\tTb927.10.10350\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10350\tTb927.10.10350\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10350\tTb927.10.10350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10350\tTb927.10.10350\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10360\tMARP\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\tMicrotubule-associated repetitive protein\t\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10360\tMARP\t\tGO:0005737\tPMID:7986649\tIC\tGO:0008017\tC\tMicrotubule-associated repetitive protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10360\tMARP\t\tGO:0008017\tPMID:7986649\tIDA\t\tF\tMicrotubule-associated repetitive protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10360\tMARP\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\tMicrotubule-associated repetitive protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10360\tMARP\t\tGO:0030992\tPMID:20923419\tIPI\tGeneDB:Tb927.3.3000\tC\tMicrotubule-associated repetitive protein\t\tmRNA\ttaxon:185431\t20170206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10360\tMARP\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tMicrotubule-associated repetitive protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10370\tTb927.10.10370\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10380\tTb927.10.10380\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10380\tTb927.10.10380\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10380\tTb927.10.10380\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10380\tTb927.10.10380\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10380\tTb927.10.10380\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10390\tTR\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\ttrypanothione reductase\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10390\tTR\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttrypanothione reductase\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10390\tTR\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:IPR004099\tC\ttrypanothione reductase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10390\tTR\t\tGO:0015042\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01423\tF\ttrypanothione reductase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10390\tTR\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\ttrypanothione reductase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10390\tTR\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\ttrypanothione reductase\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1040\tCBP1B\t\tGO:0004185\tGO_REF:0000011\tISM\tInterPro:IPR001563\tF\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1040\tCBP1B\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001563\tP\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1040\tCBP1B\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10400\tMRPS11\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein S11\tuS11m\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10400\tMRPS11\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein S11\tuS11m\tmRNA\ttaxon:185431\t20170526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10410\tMCM8\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001208\tF\tDNA replication licensing factor MCM8, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10410\tMCM8\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA replication licensing factor MCM8, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10410\tMCM8\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA replication licensing factor MCM8, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10410\tMCM8\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA replication licensing factor MCM8, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10410\tMCM8\t\tGO:0006270\tGO_REF:0000012\tISA\tUniProtKB:P49739\tP\tDNA replication licensing factor MCM8, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10410\tMCM8\t\tGO:0042555\tPMID:23451133\tIDA\t\tC\tDNA replication licensing factor MCM8, putative\t\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10420\tTb927.10.10420\t\tGO:0003756\tGO_REF:0000002\tISS\t\tF\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10420\tTb927.10.10420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10420\tTb927.10.10420\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10420\tTb927.10.10420\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10420\tTb927.10.10420\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10420\tTb927.10.10420\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10420\tTb927.10.10420\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10440\tMCP8\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10440\tMCP8\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20110718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10440\tMCP8\t\tGO:0005743\tGO_REF:0000012\tISA\tUniProtKB:P40614\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10440\tMCP8\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10440\tMCP8\t\tGO:0015317\tPMID:32353560\tISA\tUniProtKB:P40035|UniProtKB:P23641\tF\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20200520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10460\tTb927.10.10460\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10460\tTb927.10.10460\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10460\tTb927.10.10460\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10460\tTb927.10.10460\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10460\tTb927.10.10460\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10460\tTb927.10.10460\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10470\tTb927.10.10470\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10470\tTb927.10.10470\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10470\tTb927.10.10470\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10470\tTb927.10.10470\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10470\tTb927.10.10470\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10480\tTb927.10.10480\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10480\tTb927.10.10480\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10480\tTb927.10.10480\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10480\tTb927.10.10480\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10480\tTb927.10.10480\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10490\tTb927.10.10490\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10490\tTb927.10.10490\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10490\tTb927.10.10490\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10490\tTb927.10.10490\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10490\tTb927.10.10490\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1050\tCBP1C\t\tGO:0004185\tGO_REF:0000011\tISM\tInterPro:IPR001563\tF\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1050\tCBP1C\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001563\tP\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1050\tCBP1C\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10500\tTb927.10.10500\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10500\tTb927.10.10500\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10500\tTb927.10.10500\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10500\tTb927.10.10500\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10500\tTb927.10.10500\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10510\tTb927.10.10510\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10510\tTb927.10.10510\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10510\tTb927.10.10510\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10510\tTb927.10.10510\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10510\tTb927.10.10510\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10520\tTb927.10.10520\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10520\tTb927.10.10520\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10520\tTb927.10.10520\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10520\tTb927.10.10520\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10530\tTb927.10.10530\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10530\tTb927.10.10530\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10530\tTb927.10.10530\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10530\tTb927.10.10530\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10540\tTb927.10.10540\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10540\tTb927.10.10540\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10540\tTb927.10.10540\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10540\tTb927.10.10540\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10540\tTb927.10.10540\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10550\tTb927.10.10550\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10550\tTb927.10.10550\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10550\tTb927.10.10550\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10550\tTb927.10.10550\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10550\tTb927.10.10550\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10560\tTb927.10.10560\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10560\tTb927.10.10560\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10560\tTb927.10.10560\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10560\tTb927.10.10560\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10560\tTb927.10.10560\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10570\tTb927.10.10570\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10570\tTb927.10.10570\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10570\tTb927.10.10570\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10570\tTb927.10.10570\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10570\tTb927.10.10570\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10580\tTb927.10.10580\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10580\tTb927.10.10580\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10580\tTb927.10.10580\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10580\tTb927.10.10580\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10580\tTb927.10.10580\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10590\tTb927.10.10590\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10590\tTb927.10.10590\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10590\tTb927.10.10590\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10590\tTb927.10.10590\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10590\tTb927.10.10590\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000558\tP\thistone H2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1060\tTCP-1-delta\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tT-complex protein 1, delta subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1060\tTCP-1-delta\t\tGO:0005832\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tC\tT-complex protein 1, delta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1060\tTCP-1-delta\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, delta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1060\tTCP-1-delta\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, delta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1060\tTCP-1-delta\t\tGO:0051726\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, delta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10600\tTb927.10.10600\t\tGO:0003779\tGO_REF:0000002\tISS\t\tF\tARP2/3 complex 16kDa subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10600\tTb927.10.10600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tARP2/3 complex 16kDa subunit, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10600\tTb927.10.10600\t\tGO:0005885\tGO_REF:0000002\tISS\t\tC\tARP2/3 complex 16kDa subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10600\tTb927.10.10600\t\tGO:0007010\tGO_REF:0000002\tISS\t\tP\tARP2/3 complex 16kDa subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10610\tTb927.10.10610\t\tGO:0004725\tGO_REF:0000011\tISM\tInterPro:IPR007482\tF\tprotein tyrosine phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10610\tTb927.10.10610\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tprotein tyrosine phosphatase, putative\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10610\tTb927.10.10610\t\tGO:0016020\tPMID:15174129\tISM\t\tC\tprotein tyrosine phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10610\tTb927.10.10610\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tprotein tyrosine phosphatase, putative\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10650\tNAR1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcytosolic Fe-S cluster assembly factor NAR1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10650\tNAR1\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tcytosolic Fe-S cluster assembly factor NAR1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10650\tNAR1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tcytosolic Fe-S cluster assembly factor NAR1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10670\tTb927.10.10670\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinetoplastid-specific dual specificity phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10670\tTb927.10.10670\t\tGO:0008138\tGO_REF:0000011\tISM\tInterPro:IPR000340\tF\tkinetoplastid-specific dual specificity phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10680\tTb927.10.10680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10680\tTb927.10.10680\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10690\tCEP19\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tCEP19-like protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0000262\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tC\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0000278\tPMID:7557404\tTAS\t\tP\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0005634\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tC\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0005737\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tC\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0005829\tGO_REF:0000002\tTAS\t\tC\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20100916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0006468\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tP\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0007049\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tP\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0097472\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tF\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10700\tPRP31\t\tGO:0003723\tPMID:11166385\tISA\tUniProtKB:AAK09083\tF\tsplicing factor Prp31\t\tmRNA\ttaxon:185431\t20090507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10700\tPRP31\t\tGO:0005634\tPMID:16219373\tEXP\t\tC\tsplicing factor Prp31\t\tmRNA\ttaxon:185431\t20090507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10700\tPRP31\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tsplicing factor Prp31\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10700\tPRP31\t\tGO:0008380\tPMID:11166385\tISA\tUniProtKB:AAK09083\tP\tsplicing factor Prp31\t\tmRNA\ttaxon:185431\t20090507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10710\tTb927.10.10710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10730\tRIF5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA Interference Factor 5\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10740\tTb927.10.10740\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10750\tTb927.10.10750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmetallo-peptidase, Clan MC, Family M14, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10750\tTb927.10.10750\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tmetallo-peptidase, Clan MC, Family M14, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10750\tTb927.10.10750\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR000834\tP\tmetallo-peptidase, Clan MC, Family M14, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10770\tGCS1\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tGenerative cell specific 1 protein, putative\tHAP2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10780\tTb927.10.10780\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10780\tTb927.10.10780\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10780\tTb927.10.10780\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10790\tTb927.10.10790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1080\tRPS23\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:P39028\tF\t40S ribosomal protein S23, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1080\tRPS23\t\tGO:0003735\tGO_REF:0000012\tISA\tUniProtKB:P39028\tF\t40S ribosomal protein S23, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1080\tRPS23\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S23, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1080\tRPS23\t\tGO:0006412\tGO_REF:0000012\tISA\tUniProtKB:P39028\tP\t40S ribosomal protein S23, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0006897\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10810\tTb927.10.10810\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tadenosine deaminase-like protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10810\tTb927.10.10810\t\tGO:0008033\tGO_REF:0000002\tISS\t\tP\tadenosine deaminase-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10810\tTb927.10.10810\t\tGO:0008251\tGO_REF:0000002\tISS\t\tF\tadenosine deaminase-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10820\tTb927.10.10820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0003729\tPMID:18583347\tIDA\t\tF\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20120830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0003729\tPMID:30544166\tIDA\t\tF\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20191007\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tC\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20160921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0032473\tPMID:18583347\tIDA\t\tC\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20100922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10830\tRGG2\t\tGO:0090615\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tP\tMRB1-associated protein\tRGGm\tmRNA\ttaxon:185431\t20160921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10840\tESP15\t\tGO:0005768\tPMID:25931509\tIDA\t\tC\tPlexin repeat, putative\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10850\tAGO1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tProtein argonaute-1\tAGO\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10850\tAGO1\t\tGO:0005737\tPMID:14670085\tIDA\t\tC\tProtein argonaute-1\tAGO\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10850\tAGO1\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tProtein argonaute-1\tAGO\tmRNA\ttaxon:185431\t20220209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10850\tAGO1\t\tGO:0010494\tPMID:26187993\tIDA\t\tC\tProtein argonaute-1\tAGO\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10850\tAGO1\t\tGO:0016246\tPMID:14670085\tIMP\t\tP\tProtein argonaute-1\tAGO\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10850\tAGO1\t\tGO:0030422\tPMID:14673174\tIMP\t\tP\tProtein argonaute-1\tAGO\tmRNA\ttaxon:185431\t20090520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10850\tAGO1\t\tGO:0043022\tPMID:19961881\tIMP\t\tF\tProtein argonaute-1\tAGO\tmRNA\ttaxon:185431\t20100204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10870\tTb927.10.10870\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tCMGC family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10870\tTb927.10.10870\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCMGC family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10870\tTb927.10.10870\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCMGC family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10870\tTb927.10.10870\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003439\tF\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0009898\tGO_REF:0000011\tISM\tPfam:PF00005\tC\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0042626\tGO_REF:0000011\tISM\tPfam:PF00005\tF\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0043190\tGO_REF:0000011\tISM\tPfam:PF00005\tC\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10890\tTb927.10.10890\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10890\tTb927.10.10890\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1090\tRPS23\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:P39028\tF\t40S ribosomal protein S23, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1090\tRPS23\t\tGO:0003735\tGO_REF:0000012\tISA\tUniProtKB:P39028\tF\t40S ribosomal protein S23, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1090\tRPS23\t\tGO:0006412\tGO_REF:0000012\tISA\tUniProtKB:P39028\tP\t40S ribosomal protein S23, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10910\tTb927.10.10910\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10910\tTb927.10.10910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10920\tTb927.10.10920\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10920\tTb927.10.10920\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10930\tTb927.10.10930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10940\tTb927.10.10940\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10940\tTb927.10.10940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10950\tTb927.10.10950\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10960\tTb927.10.10960\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10970\tTb927.10.10970\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10980\tTb927.10.10980\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\theat shock protein 90, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10980\tTb927.10.10980\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein 90, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10980\tTb927.10.10980\t\tGO:0005813\tGO_REF:0000012\tISA\tUniProtKB:P12861\tC\theat shock protein 90, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10980\tTb927.10.10980\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:P12861\tP\theat shock protein 90, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10980\tTb927.10.10980\t\tGO:0006986\tGO_REF:0000012\tISA\tUniProtKB:P12861\tP\theat shock protein 90, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10980\tTb927.10.10980\t\tGO:0042026\tGO_REF:0000012\tISA\tUniProtKB:P12861\tP\theat shock protein 90, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10980\tTb927.10.10980\t\tGO:0042623\tGO_REF:0000012\tISA\tUniProtKB:P12861\tF\theat shock protein 90, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10990\tTb927.10.10990\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted WD40 repeat protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1100\tTb927.10.1100\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF00347\tF\t60S ribosomal protein L9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1100\tTb927.10.1100\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L9, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1100\tTb927.10.1100\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L9, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1100\tTb927.10.1100\t\tGO:0005840\tGO_REF:0000011\tISM\tPfam:PF00347\tC\t60S ribosomal protein L9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1100\tTb927.10.1100\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF00347\tP\t60S ribosomal protein L9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1100\tTb927.10.1100\t\tGO:0042254\tGO_REF:0000011\tISM\tPfam:PF00347\tP\t60S ribosomal protein L9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11000\tTb927.10.11000\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11010\tTb927.10.11010\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11010\tTb927.10.11010\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11020\tMSH2\t\tGO:0003684\tGO_REF:0000011\tISM\tInterPro:IPR000432\tF\tDNA mismatch repair protein MSH2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11020\tMSH2\t\tGO:0005515\tPMID:32373549\tIPI\tGeneDB:MSH6|GeneDB:Tb927.9.5240\tF\tDNA mismatch repair protein MSH2, putative\t\tmRNA\ttaxon:185431\t20200522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11020\tMSH2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA mismatch repair protein MSH2, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11020\tMSH2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA mismatch repair protein MSH2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11020\tMSH2\t\tGO:0006259\tGO_REF:0000011\tISM\tInterPro:IPR007696\tP\tDNA mismatch repair protein MSH2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11020\tMSH2\t\tGO:0006298\tGO_REF:0000011\tISM\tInterPro:IPR000432\tP\tDNA mismatch repair protein MSH2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11030\tATOM11\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPresent in the outer mitochondrial membrane proteome 21\tPOMP21\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11030\tATOM11\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 21\tPOMP21\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11030\tATOM11\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 21\tPOMP21\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11030\tATOM11\t\tGO:0005742\tPMID:25808593\tIPI\tGeneDB:Tb927.9.9660\tC\tPresent in the outer mitochondrial membrane proteome 21\tPOMP21\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11030\tATOM11\t\tGO:0006626\tPMID:25808593\tIDA\t\tP\tPresent in the outer mitochondrial membrane proteome 21\tPOMP21\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11030\tATOM11\t\tGO:0030150\tPMID:25808593\tIMP\t\tP\tPresent in the outer mitochondrial membrane proteome 21\tPOMP21\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11040\tTb927.10.11040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11050\tTb927.10.11050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11050\tTb927.10.11050\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11050\tTb927.10.11050\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11060\tTb927.10.11060\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11060\tTb927.10.11060\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11070\tTb927.10.11070\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11080\tTb927.10.11080\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tparaflagellar rod protein\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11080\tTb927.10.11080\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tparaflagellar rod protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11090\tTb927.10.11090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1110\tTb927.10.1110\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1110\tTb927.10.1110\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1110\tTb927.10.1110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1110\tTb927.10.1110\t\tGO:0005737\tPMID:29931198\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1110\tTb927.10.1110\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11100\tTb927.10.11100\t\tGO:0003904\tGO_REF:0000011\tISM\t\tF\tdeoxyribodipyrimidine photo-lyase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11100\tTb927.10.11100\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tdeoxyribodipyrimidine photo-lyase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11100\tTb927.10.11100\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tdeoxyribodipyrimidine photo-lyase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11100\tTb927.10.11100\t\tGO:0006281\tGO_REF:0000011\tISM\t\tP\tdeoxyribodipyrimidine photo-lyase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11110\tTb927.10.11110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11110\tTb927.10.11110\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11130\tSET4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSET domain protein 4\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11130\tSET4\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 4\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11140\tTb927.10.11140\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11140\tTb927.10.11140\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11140\tTb927.10.11140\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11160\tNFU2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tHIRA-interacting protein 5, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11160\tNFU2\t\tGO:0005739\tPMID:27181928\tIDA\t\tC\tHIRA-interacting protein 5, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11160\tNFU2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tHIRA-interacting protein 5, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11160\tNFU2\t\tGO:0005759\tGO_REF:0000012\tISA\tUniProtKB:P32860\tC\tHIRA-interacting protein 5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11160\tNFU2\t\tGO:0006879\tGO_REF:0000012\tISA\tUniProtKB:P32860\tP\tHIRA-interacting protein 5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11170\tTb927.10.11170\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11170\tTb927.10.11170\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11170\tTb927.10.11170\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11180\tATG7\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR000594\tF\tUbiquitin-like modifier-activating enzyme ATG7, putative\tAPG7L\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11180\tATG7\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUbiquitin-like modifier-activating enzyme ATG7, putative\tAPG7L\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11180\tATG7\t\tGO:0006623\tGO_REF:0000012\tISA\tUniProtKB:P38862\tP\tUbiquitin-like modifier-activating enzyme ATG7, putative\tAPG7L\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11180\tATG7\t\tGO:0006914\tGO_REF:0000012\tISA\tUniProtKB:P38862\tP\tUbiquitin-like modifier-activating enzyme ATG7, putative\tAPG7L\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11180\tATG7\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tUbiquitin-like modifier-activating enzyme ATG7, putative\tAPG7L\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11180\tATG7\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tUbiquitin-like modifier-activating enzyme ATG7, putative\tAPG7L\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11190\tTb927.10.11190\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttRNA-splicing ligase RtcB, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1120\tTb927.10.1120\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1120\tTb927.10.1120\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11200\tTb927.10.11200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11200\tTb927.10.11200\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11210\tTb927.10.11210\t\tGO:0005634\tPMID:29781112\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11210\tTb927.10.11210\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11220\tPSSA-2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprocyclic form surface phosphoprotein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11220\tPSSA-2\t\tGO:0009986\tPMID:19759911\tIDA\t\tC\tprocyclic form surface phosphoprotein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11220\tPSSA-2\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tprocyclic form surface phosphoprotein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11230\tTb927.10.11230\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRas-induced vulval development antagonist, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11230\tTb927.10.11230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRas-induced vulval development antagonist, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11240\tTb927.10.11240\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11260\tmS41\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11260\tmS41\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tSSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11270\tRBP23\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11270\tRBP23\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11270\tRBP23\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11270\tRBP23\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11270\tRBP23\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11280\tTb927.10.11280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11280\tTb927.10.11280\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1130\tTb927.10.1130\t\tGO:0003777\tGO_REF:0000012\tISA\tUniProtKB:O14645\tF\tdynein arm light chain, axonemal, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1130\tTb927.10.1130\t\tGO:0005858\tGO_REF:0000012\tISA\tUniProtKB:O14645\tC\tdynein arm light chain, axonemal, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11300\tPFC16\t\tGO:0016281\tPMID:24839125\tIPI\tGeneDB:Tb927.8.4500|GeneDB:Tb927.7.1670|GeneDB:Tb927.11.14590\tC\tparaflagellar rod component, putative\t\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11310\tIFT57/55\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tintraflagellar transport protein 57/55\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11310\tIFT57/55\t\tGO:0030992\tPMID:20923419\tIPI\tGeneDB:Tb927.3.3000\tC\tintraflagellar transport protein 57/55\t\tmRNA\ttaxon:185431\t20170206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11310\tIFT57/55\t\tGO:0035735\tPMID:18094047\tIMP\t\tP\tintraflagellar transport protein 57/55\t\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11350\tTb927.10.11350\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11350\tTb927.10.11350\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11360\tFAZ33\t\tGO:0000159\tGO_REF:0000011\tISM\tInterPro:IPR000009\tC\tFlagellum attachment zone protein 33\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11360\tFAZ33\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:P63150\tP\tFlagellum attachment zone protein 33\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11360\tFAZ33\t\tGO:0019888\tGO_REF:0000011\tISM\tInterPro:IPR000009\tF\tFlagellum attachment zone protein 33\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11370\tTb927.10.11370\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11390\tTb927.10.11390\t\tGO:0000315\tGO_REF:0000011\tISM\tPfam:PF01159\tC\t60S ribosomal protein L6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11390\tTb927.10.11390\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000915\tF\t60S ribosomal protein L6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11390\tTb927.10.11390\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000915\tC\t60S ribosomal protein L6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11390\tTb927.10.11390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L6, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11390\tTb927.10.11390\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000915\tP\t60S ribosomal protein L6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11390\tTb927.10.11390\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\t60S ribosomal protein L6, putative\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1140\tTUBE1\t\tGO:0005198\tGO_REF:0000011\tISM\tInterPro:IPR004057\tF\tepsilon tubulin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1140\tTUBE1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tepsilon tubulin\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1140\tTUBE1\t\tGO:0005874\tGO_REF:0000011\tISM\tInterPro:IPR004057\tC\tepsilon tubulin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1140\tTUBE1\t\tGO:0007018\tGO_REF:0000024\tISS\t\tP\tepsilon tubulin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1140\tTUBE1\t\tGO:0046785\tGO_REF:0000012\tISA\tUniProtKB:Q9UJT0\tP\tepsilon tubulin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11400\tTb927.10.11400\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11400\tTb927.10.11400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11420\tTb927.10.11420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11420\tTb927.10.11420\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11430\tTb927.10.11430\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11430\tTb927.10.11430\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11440\tCYC5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tG1 cyclin CycE4, putative\tCycE4\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11440\tCYC5\t\tGO:0051726\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11440\tP\tG1 cyclin CycE4, putative\tCycE4\tmRNA\ttaxon:185431\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11440\tCYC5\t\tGO:0051726\tPMID:12665514\tIMP\t\tP\tG1 cyclin CycE4, putative\tCycE4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11450\tTb927.10.11450\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11480\tTb927.10.11480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11480\tTb927.10.11480\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11480\tTb927.10.11480\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11480\tTb927.10.11480\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11480\tTb927.10.11480\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11500\tTb927.10.11500\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tconserved protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11510\tTb927.10.11510\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11520\tTIM13\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial import inner membrane translocase subunit tim13\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11520\tTIM13\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial import inner membrane translocase subunit tim13\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11520\tTIM13\t\tGO:0005744\tPMID:27991487\tIPI\tGeneDB:Tb927.11.13290\tC\tmitochondrial import inner membrane translocase subunit tim13\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11530\tTb927.10.11530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11530\tTb927.10.11530\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11530\tTb927.10.11530\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11540\tRPS3\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S3, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11540\tRPS3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S3, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11540\tRPS3\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001351\tP\t40S ribosomal protein S3, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11540\tRPS3\t\tGO:0042254\tGO_REF:0000012\tISA\tUniProtKB:RS3_DROME\tP\t40S ribosomal protein S3, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11550\tTb927.10.11550\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11580\tTb927.10.11580\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tpredicted WD40 repeat protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11590\tTb927.10.11590\t\tGO:0004516\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01514\tF\tnicotinate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11590\tTb927.10.11590\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tnicotinate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11590\tTb927.10.11590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tnicotinate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11590\tTb927.10.11590\t\tGO:0019358\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01514\tP\tnicotinate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11590\tTb927.10.11590\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tnicotinate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1160\tTb927.10.1160\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1160\tTb927.10.1160\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1160\tTb927.10.1160\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1160\tTb927.10.1160\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11600\tTb927.10.11600\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11600\tTb927.10.11600\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11610\tTb927.10.11610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSKP1-like protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11620\tTb927.10.11620\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcalcium-transporting ATPase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11630\tTb927.10.11630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPSP1 C-terminal conserved region, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11630\tTb927.10.11630\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tPSP1 C-terminal conserved region, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11640\tTb927.10.11640\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tProtein prenyltransferase alpha subunit repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11650\tTb927.10.11650\t\tGO:0006499\tPMID:16020724\tTAS\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20090325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11650\tTb927.10.11650\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11650\tTb927.10.11650\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11650\tTb927.10.11650\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11660\tTb927.10.11660\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11660\tTb927.10.11660\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11670\tTb927.10.11670\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11680\tVCL2\t\tGO:0005179\tGO_REF:0000011\tISM\tInterPro:IPR001545\tF\tEnriched in surface-labeled proteome protein 20\tESP20\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11680\tVCL2\t\tGO:0005247\tGO_REF:0000011\tISM\tInterPro:IPR001807\tF\tEnriched in surface-labeled proteome protein 20\tESP20\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11680\tVCL2\t\tGO:0005576\tGO_REF:0000011\tISM\tInterPro:IPR001545\tC\tEnriched in surface-labeled proteome protein 20\tESP20\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11680\tVCL2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEnriched in surface-labeled proteome protein 20\tESP20\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11680\tVCL2\t\tGO:0005768\tPMID:25931509\tIDA\t\tC\tEnriched in surface-labeled proteome protein 20\tESP20\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11680\tVCL2\t\tGO:0005783\tPMID:29244877\tIDA\t\tC\tEnriched in surface-labeled proteome protein 20\tESP20\tmRNA\ttaxon:185431\t20171220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11680\tVCL2\t\tGO:0006821\tGO_REF:0000011\tISM\tInterPro:IPR001807\tP\tEnriched in surface-labeled proteome protein 20\tESP20\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11680\tVCL2\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001807\tC\tEnriched in surface-labeled proteome protein 20\tESP20\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11690\tTb927.10.11690\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tYEATS family, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11690\tTb927.10.11690\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tYEATS family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1170\tIFT172\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tintraflagellar transport protein 172\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1170\tIFT172\t\tGO:0030990\tPMID:30550896\tHDA\t\tC\tintraflagellar transport protein 172\t\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1170\tIFT172\t\tGO:0030992\tPMID:20923419\tIPI\tGeneDB:Tb927.3.3000\tC\tintraflagellar transport protein 172\t\tmRNA\ttaxon:185431\t20170206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1170\tIFT172\t\tGO:0031514\tPMID:18094047|PMID:24741115\tIDA\t\tC\tintraflagellar transport protein 172\t\tmRNA\ttaxon:185431\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1170\tIFT172\t\tGO:0035735\tPMID:18094047\tIMP\t\tP\tintraflagellar transport protein 172\t\tmRNA\ttaxon:185431\t20150305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1170\tIFT172\t\tGO:0036064\tPMID:18094047\tIDA\t\tC\tintraflagellar transport protein 172\t\tmRNA\ttaxon:185431\t20150303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11700\tTb927.10.11700\t\tGO:0004385\tGO_REF:0000024\tISS\t\tF\tguanylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11700\tTb927.10.11700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tguanylate kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11700\tTb927.10.11700\t\tGO:0015949\tGO_REF:0000024\tISS\t\tP\tguanylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11710\tTb927.10.11710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11710\tTb927.10.11710\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11710\tTb927.10.11710\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11720\tZCW1\t\tGO:0005634\tPMID:29931198\tIDA\t\tC\tZinc finger CW-type protein 1\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11720\tZCW1\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tZinc finger CW-type protein 1\t\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11720\tZCW1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tZinc finger CW-type protein 1\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11720\tZCW1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tZinc finger CW-type protein 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11760\tPUF6\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR001313\tF\tpumilio/PUF RNA binding protein 6\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11760\tPUF6\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tpumilio/PUF RNA binding protein 6\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11760\tPUF6\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpumilio/PUF RNA binding protein 6\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11760\tPUF6\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tpumilio/PUF RNA binding protein 6\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11760\tPUF6\t\tGO:0016071\tGO_REF:0000011\tISM\tInterPro:IPR001313\tP\tpumilio/PUF RNA binding protein 6\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11770\tSDH4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsuccinate dehydrogenase cytochrome B subunit\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11770\tSDH4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tsuccinate dehydrogenase cytochrome B subunit\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11770\tSDH4\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tsuccinate dehydrogenase cytochrome B subunit\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11780\tTb927.10.11780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11780\tTb927.10.11780\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1180\tTb927.10.1180\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11800\tTb927.10.11800\t\tGO:0003777\tGO_REF:0000002\tISS\t\tF\tAxonemal inner arm dynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11800\tTb927.10.11800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAxonemal inner arm dynein light chain, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11800\tTb927.10.11800\t\tGO:0007018\tGO_REF:0000002\tISS\t\tP\tAxonemal inner arm dynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11810\tTb927.10.11810\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11820\tKRIPP17\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 22\tmt-SAF22\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11820\tKRIPP17\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 22\tmt-SAF22\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11820\tKRIPP17\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitoribosomal SSU assembly factor 22\tmt-SAF22\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11830\tTb927.10.11830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11840\tTZP50\t\tGO:0035869\tPMID:30550896\tHDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11840\tTZP50\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11840\tTZP50\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11850\tTZP112\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11850\tTZP112\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11860\tTb927.10.11860\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tCornifin (SPRR) family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11870\tGRBC5\t\tGO:0003723\tPMID:21451155\tIDA\t\tF\tmitochondrial RNA binding protein\tMRB11870\tmRNA\ttaxon:185431\t20120906\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11870\tGRBC5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding protein\tMRB11870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11870\tGRBC5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding protein\tMRB11870\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11870\tGRBC5\t\tGO:0009451\tPMID:24250748\tIMP\t\tP\tmitochondrial RNA binding protein\tMRB11870\tmRNA\ttaxon:185431\t20170227\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11870\tGRBC5\t\tGO:0016070\tPMID:21451155\tIDA\t\tP\tmitochondrial RNA binding protein\tMRB11870\tmRNA\ttaxon:185431\t20120906\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11870\tGRBC5\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmitochondrial RNA binding protein\tMRB11870\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11870\tGRBC5\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tC\tmitochondrial RNA binding protein\tMRB11870\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11870\tGRBC5\t\tGO:0090615\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tP\tmitochondrial RNA binding protein\tMRB11870\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11880\tTb927.10.11880\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11890\tTb927.10.11890\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11890\tTb927.10.11890\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11900\tMIC20\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tthioredoxin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11900\tMIC20\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tthioredoxin, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11900\tMIC20\t\tGO:0061617\tPMID:30415698\tIDA\t\tC\tthioredoxin, putative\t\tmRNA\ttaxon:185431\t20181204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11910\tTb927.10.11910\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR007114\tP\tmajor facilitator superfamily, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11910\tTb927.10.11910\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR007114\tC\tmajor facilitator superfamily, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11920\tTb927.10.11920\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11930\tTb927.10.11930\t\tGO:0003858\tPMID:21767577\tIDA\t\tF\tbeta-D-hydroxybutyrate dehydrogenase\t\tmRNA\ttaxon:185431\t20120103\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11930\tTb927.10.11930\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tbeta-D-hydroxybutyrate dehydrogenase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11930\tTb927.10.11930\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tbeta-D-hydroxybutyrate dehydrogenase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11930\tTb927.10.11930\t\tGO:0046951\tPMID:21767577\tTAS\t\tP\tbeta-D-hydroxybutyrate dehydrogenase\t\tmRNA\ttaxon:185431\t20120103\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11940\tTb927.10.11940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tABC1 protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11940\tTb927.10.11940\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tABC1 protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11940\tTb927.10.11940\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tABC1 protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11950\tTb927.10.11950\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11960\tPNUTS\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSerine/threonine-protein phosphatase 1 regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11960\tPNUTS\t\tGO:0006369\tPMID:32084124\tIMP\t\tP\tSerine/threonine-protein phosphatase 1 regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20200723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11960\tPNUTS\t\tGO:0031940\tPMID:32084124\tIMP\t\tP\tSerine/threonine-protein phosphatase 1 regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20200723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11970\tGlnAT\t\tGO:0005829\tPMID:19443056\tIDA\t\tC\tglutamine aminotransferase (GlnAT)\t\tmRNA\ttaxon:185431\t20130524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11970\tGlnAT\t\tGO:0047801\tPMID:19443056\tIDA\t\tF\tglutamine aminotransferase (GlnAT)\t\tmRNA\ttaxon:185431\t20130524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11970\tGlnAT\t\tGO:0052654\tPMID:19443056\tIDA\t\tF\tglutamine aminotransferase (GlnAT)\t\tmRNA\ttaxon:185431\t20130524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11970\tGlnAT\t\tGO:0070548\tPMID:19443056\tIDA\t\tF\tglutamine aminotransferase (GlnAT)\t\tmRNA\ttaxon:185431\t20130524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11980\tTb927.10.11980\t\tGO:0005484\tGO_REF:0000012\tISA\tUniProtKB:Q9SUJ1\tF\tQA-SNARE protein putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11980\tTb927.10.11980\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9GU66_DROME\tC\tQA-SNARE protein putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11980\tTb927.10.11980\t\tGO:0061025\tGO_REF:0000012\tISA\tUniProtKB:Q9SUJ1\tP\tQA-SNARE protein putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11990\tTb927.10.11990\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\t60S ribosome subunit biogenesis protein NIP7, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11990\tTb927.10.11990\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosome subunit biogenesis protein NIP7, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11990\tTb927.10.11990\t\tGO:0042273\tGO_REF:0000024\tISO\tUniProtKB:Q08962\tP\t60S ribosome subunit biogenesis protein NIP7, putative\t\tmRNA\ttaxon:185431\t20180125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1200\tTb927.10.1200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tProgrammed cell death protein 2, C-terminal putative domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12000\tTb927.10.12000\t\tGO:0005737\tPMID:20442400\tIDA\t\tC\tiron-sulfur cluster assembly protein, putative\t\tmRNA\ttaxon:185431\t20110426\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12000\tTb927.10.12000\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tiron-sulfur cluster assembly protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12000\tTb927.10.12000\t\tGO:0005739\tPMID:20442400\tIDA\t\tC\tiron-sulfur cluster assembly protein, putative\t\tmRNA\ttaxon:185431\t20110426\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12000\tTb927.10.12000\t\tGO:0034227\tPMID:20442400\tIDA\t\tP\tiron-sulfur cluster assembly protein, putative\t\tmRNA\ttaxon:185431\t20110426\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12000\tTb927.10.12000\t\tGO:0051536\tPMID:20442400\tIDA\t\tF\tiron-sulfur cluster assembly protein, putative\t\tmRNA\ttaxon:185431\t20110426\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12010\tTb927.10.12010\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12010\tTb927.10.12010\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12020\tTb927.10.12020\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\trecA bacterial DNA recombination protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12020\tTb927.10.12020\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\trecA bacterial DNA recombination protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12030\tTb927.10.12030\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12050\tTb927.10.12050\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12050\tTb927.10.12050\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12050\tTb927.10.12050\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12050\tTb927.10.12050\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12060\tTb927.10.12060\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12060\tTb927.10.12060\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12060\tTb927.10.12060\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12070\tTb927.10.12070\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12070\tTb927.10.12070\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12070\tTb927.10.12070\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12080\tTb927.10.12080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12080\tTb927.10.12080\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12090\tRBP7A\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12090\tRBP7A\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12090\tRBP7A\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12090\tRBP7A\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12090\tRBP7A\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12090\tRBP7A\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1210\tTb927.10.1210\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\tkatanin, putative\t\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1210\tTb927.10.1210\t\tGO:0008352\tGO_REF:0000012\tISA\tUniProtKB:E1JJ62_DROME\tC\tkatanin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1210\tTb927.10.1210\t\tGO:0016197\tGO_REF:0000012\tISA\tUniProtKB:P46467\tP\tkatanin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1210\tTb927.10.1210\t\tGO:0016887\tGO_REF:0000011\tISM\tPfam:PF00004\tF\tkatanin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12100\tRBP7B\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein 7B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12100\tRBP7B\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein 7B\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12100\tRBP7B\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein 7B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12100\tRBP7B\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tRNA-binding protein 7B\t\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12100\tRBP7B\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tRNA-binding protein 7B\t\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12110\tTb927.10.12110\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12130\tTZP88\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tUbiquitin family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12130\tTZP88\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tUbiquitin family, putative\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12140\tTb927.10.12140\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12150\tTb927.10.12150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12160\tTb927.10.12160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12170\tTb927.10.12170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRAB-interacting protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12170\tTb927.10.12170\t\tGO:0017137\tGO_REF:0000011\tISM\tPfam:PF03208\tF\tRAB-interacting protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12190\tTb927.10.12190\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tRAB-interacting protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12190\tTb927.10.12190\t\tGO:0017137\tGO_REF:0000011\tISM\tPfam:PF03208\tF\tRAB-interacting protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12200\tTb927.10.12200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12200\tTb927.10.12200\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12200\tTb927.10.12200\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12210\tTb927.10.12210\t\tGO:0004750\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01163\tF\tribulose-5-phosphate 3-epimerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12210\tTb927.10.12210\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tribulose-5-phosphate 3-epimerase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12210\tTb927.10.12210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tribulose-5-phosphate 3-epimerase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12210\tTb927.10.12210\t\tGO:0006098\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01163\tP\tribulose-5-phosphate 3-epimerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12210\tTb927.10.12210\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tribulose-5-phosphate 3-epimerase, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12210\tTb927.10.12210\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tribulose-5-phosphate 3-epimerase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12220\tTb927.10.12220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12220\tTb927.10.12220\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12220\tTb927.10.12220\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12230\tTb927.10.12230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12240\tTb927.10.12240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t3-ketoacyl-CoA reductase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12240\tTb927.10.12240\t\tGO:0005783\tGO_REF:0000002\tISO\tGeneDB:TcCLB.509213.100\tC\t3-ketoacyl-CoA reductase, putative\t\tmRNA\ttaxon:185431\t20140123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12240\tTb927.10.12240\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00106\tP\t3-ketoacyl-CoA reductase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12240\tTb927.10.12240\t\tGO:0016491\tGO_REF:0000011\tISM\tPfam:PF00106\tF\t3-ketoacyl-CoA reductase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12250\tTb927.10.12250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12250\tTb927.10.12250\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12260\tTb927.10.12260\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcytosolic nonspecific dipeptidase, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12260\tTb927.10.12260\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR002933\tP\tcytosolic nonspecific dipeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12260\tTb927.10.12260\t\tGO:0008237\tGO_REF:0000011\tISM\tInterPro:IPR002933\tF\tcytosolic nonspecific dipeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12270\tTb927.10.12270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmethyltransferase domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12280\tTb927.10.12280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12290\tTb927.10.12290\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12290\tTb927.10.12290\t\tGO:0006506\tPMID:2525555\tTAS\t\tP\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12290\tTb927.10.12290\t\tGO:0008194\tPMID:2525555\tTAS\t\tF\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1230\tESP23\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tEnriched in surface-labeled proteome protein 23\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1230\tESP23\tNOT\tGO:0009986\tPMID:25931509\tIDA\t\tC\tEnriched in surface-labeled proteome protein 23\t\tmRNA\ttaxon:185431\t20170711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12300\tCLDP15\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCardiolipin-dependent protein 15kDa\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12300\tCLDP15\t\tGO:0005739\tPMID:31536395\tIDA\t\tC\tCardiolipin-dependent protein 15kDa\t\tmRNA\ttaxon:185431\t20191115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12300\tCLDP15\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tCardiolipin-dependent protein 15kDa\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12310\tTb927.10.12310\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thelicase-like protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12320\tTZP44\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12320\tTZP44\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12330\tZC3H34\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12330\tZC3H34\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12330\tZC3H34\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12330\tZC3H34\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12340\tTb927.10.12340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12350\tTb927.10.12350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12360\tTb927.10.12360\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12360\tTb927.10.12360\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12360\tTb927.10.12360\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12370\tGCS\t\tGO:0000302\tPMID:19818018\tIMP\tGeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase\t\tmRNA\ttaxon:185431\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12370\tGCS\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tgamma-glutamylcysteine synthetase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12370\tGCS\t\tGO:0006750\tPMID:19818018\tIMP\tGeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase\t\tmRNA\ttaxon:185431\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12370\tGCS\t\tGO:0019342\tPMID:19818018\tIMP\tGeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase\t\tmRNA\ttaxon:185431\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12370\tGCS\t\tGO:0019342\tPMID:12888552\tIMP\t\tP\tgamma-glutamylcysteine synthetase\t\tmRNA\ttaxon:185431\t20091229\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12380\tJ42\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12380\tJ42\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1240\tTb927.10.1240\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1240\tTb927.10.1240\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1240\tTb927.10.1240\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12400\tTb927.10.12400\t\tGO:0015297\tGO_REF:0000011\tISM\tInterPro:IPR002528\tF\tmembrane transporter protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12400\tTb927.10.12400\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR002528\tC\tmembrane transporter protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12420\tTb927.10.12420\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tpredicted S. cerevisiae Got1 homologue\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12430\tTb927.10.12430\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNoc2p family, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12440\tTb927.10.12440\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12440\tTb927.10.12440\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12440\tTb927.10.12440\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12440\tTb927.10.12440\t\tGO:0005737\tPMID:29931198\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12440\tTb927.10.12440\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12450\tTb927.10.12450\t\tGO:0000331\tPMID:21437209\tISO\tGeneDB:TcCLB.507625.183\tC\tSNARE domain-containing protein, putative\t\tmRNA\ttaxon:185431\t20100929\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12450\tTb927.10.12450\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tSNARE domain-containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12470\tFAZ40\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 40\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12470\tFAZ40\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 40\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12490\tTb927.10.12490\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12490\tTb927.10.12490\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12490\tTb927.10.12490\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12490\tTb927.10.12490\t\tGO:0005737\tPMID:29931198\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12490\tTb927.10.12490\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12490\tTb927.10.12490\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tkinesin, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1250\tTb927.10.1250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAminoacyl-tRNA editing domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1250\tTb927.10.1250\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tAminoacyl-tRNA editing domain containing protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12500\tTb927.10.12500\t\tGO:0005524\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01647\tF\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12500\tTb927.10.12500\t\tGO:0005886\tGO_REF:0000012\tISA\tUniProtKB:PMA1_YEAST\tC\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12500\tTb927.10.12500\t\tGO:0015662\tGO_REF:0000011\tISM\tInterPro:IPR004014\tF\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12500\tTb927.10.12500\t\tGO:0015992\tGO_REF:0000011\tISM\tInterPro:IPR000695\tP\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12500\tTb927.10.12500\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12510\tTb927.10.12510\t\tGO:0005524\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01647\tF\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12510\tTb927.10.12510\t\tGO:0005886\tGO_REF:0000002\tISS\t\tC\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12510\tTb927.10.12510\t\tGO:0015662\tGO_REF:0000011\tISM\tInterPro:IPR004014\tF\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12510\tTb927.10.12510\t\tGO:0015992\tGO_REF:0000011\tISM\tInterPro:IPR000695\tP\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12510\tTb927.10.12510\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12520\tTb927.10.12520\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12530\tJ13\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12530\tJ13\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12530\tJ13\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12530\tJ13\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12530\tJ13\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12540\tNDUFS1\t\tGO:0004362\tGO_REF:0000011\tISM\tInterPro:IPR001041\tF\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12540\tNDUFS1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12540\tNDUFS1\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12540\tNDUFS1\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12550\tTb927.10.12550\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12560\tTb927.10.12560\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12570\tTb927.10.12570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12570\tTb927.10.12570\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12570\tTb927.10.12570\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12590\tTb927.10.12590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12590\tTb927.10.12590\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12590\tTb927.10.12590\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12590\tTb927.10.12590\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1260\tTb927.10.1260\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR004365\tF\taspartyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1260\tTb927.10.1260\t\tGO:0004816\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00457\tF\taspartyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1260\tTb927.10.1260\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:IPR004364\tC\taspartyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1260\tTb927.10.1260\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\taspartyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1260\tTb927.10.1260\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\taspartyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1260\tTb927.10.1260\t\tGO:0006421\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00457\tP\taspartyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12600\tHEN1\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tSmall RNA 2'-O-methyltransferase\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12610\tTb927.10.12610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12630\tFAZ34\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tFlagellum attachment zone protein 34\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12630\tFAZ34\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 34\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12640\tJ37\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12640\tJ37\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12650\tTb927.10.12650\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12650\tTb927.10.12650\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12650\tTb927.10.12650\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12660\tPUF2\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR001313\tF\tpumilio/PUF RNA binding protein 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12660\tPUF2\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tpumilio/PUF RNA binding protein 2\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12660\tPUF2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpumilio/PUF RNA binding protein 2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12660\tPUF2\t\tGO:0005737\tGO_REF:0000002\tTAS\t\tC\tpumilio/PUF RNA binding protein 2\t\tmRNA\ttaxon:185431\t20090903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12660\tPUF2\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tpumilio/PUF RNA binding protein 2\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12660\tPUF2\t\tGO:0016071\tGO_REF:0000011\tISM\tInterPro:IPR001313\tP\tpumilio/PUF RNA binding protein 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12670\tTb927.10.12670\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12670\tTb927.10.12670\t\tGO:0032154\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12680\tTb927.10.12680\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR008195\tF\t60S ribosomal protein L34, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12680\tTb927.10.12680\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR008195\tC\t60S ribosomal protein L34, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12680\tTb927.10.12680\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR008195\tP\t60S ribosomal protein L34, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12690\tTb927.10.12690\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12690\tTb927.10.12690\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1270\tTb927.10.1270\t\tGO:0003684\tGO_REF:0000011\tISM\tInterPro:IPR000432\tF\tmismatch repair protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1270\tTb927.10.1270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmismatch repair protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1270\tTb927.10.1270\t\tGO:0006298\tGO_REF:0000011\tISM\tInterPro:IPR000432\tP\tmismatch repair protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1270\tTb927.10.1270\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR005829\tP\tmismatch repair protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1270\tTb927.10.1270\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR005829\tC\tmismatch repair protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12700\tTb927.10.12700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpyruvate dehydrogenase E1 alpha subunit, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12700\tTb927.10.12700\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tpyruvate dehydrogenase E1 alpha subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12700\tTb927.10.12700\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tpyruvate dehydrogenase E1 alpha subunit, putative\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12700\tTb927.10.12700\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P52901\tC\tpyruvate dehydrogenase E1 alpha subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12700\tTb927.10.12700\t\tGO:0016624\tGO_REF:0000011\tISM\tInterPro:IPR001017\tF\tpyruvate dehydrogenase E1 alpha subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12710\tHSP110\t\tGO:0009408\tPMID:23592996\tIEP\t\tP\theat shock protein 110, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12720\tBOH1\t\tGO:0000910\tPMID:31217284\tIMP\t\tP\tBait On Hook 1\t\tmRNA\ttaxon:185431\t20190709\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12720\tBOH1\t\tGO:0005515\tPMID:31217284\tIPI\tGeneDB:Tb927.7.6310\tF\tBait On Hook 1\t\tmRNA\ttaxon:185431\t20190709\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12720\tBOH1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tBait On Hook 1\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12720\tBOH1\t\tGO:0110140\tPMID:31217284\tIMP\t\tP\tBait On Hook 1\t\tmRNA\ttaxon:185431\t20190709\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12720\tBOH1\t\tGO:0120120\tPMID:32518185\tIDA\t\tC\tBait On Hook 1\t\tmRNA\ttaxon:185431\t20210115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12720\tBOH1\t\tGO:0120120\tPMID:31217284\tIDA\t\tC\tBait On Hook 1\t\tmRNA\ttaxon:185431\t20190709\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12720\tBOH1\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\tBait On Hook 1\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12730\tTb927.10.12730\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12730\tTb927.10.12730\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12730\tTb927.10.12730\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12740\tZC3H35\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR000571\tF\tZinc finger CCCH domain-containing protein 35\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12740\tZC3H35\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tZinc finger CCCH domain-containing protein 35\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12740\tZC3H35\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tZinc finger CCCH domain-containing protein 35\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12740\tZC3H35\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tZinc finger CCCH domain-containing protein 35\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12750\tTb927.10.12750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12750\tTb927.10.12750\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12750\tTb927.10.12750\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12760\tZC3H36\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR000571\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12760\tZC3H36\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12760\tZC3H36\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12780\tZC3H37\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR000571\tF\tZinc finger CCCH domain-containing protein 37\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12780\tZC3H37\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tZinc finger CCCH domain-containing protein 37\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12780\tZC3H37\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tZinc finger CCCH domain-containing protein 37\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12780\tZC3H37\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tZinc finger CCCH domain-containing protein 37\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1280\tTb927.10.1280\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4499), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1280\tTb927.10.1280\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4499), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12800\tZC3H38\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR000571\tF\tZinc finger CCCH domain-containing protein 38\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12800\tZC3H38\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tZinc finger CCCH domain-containing protein 38\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12800\tZC3H38\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tZinc finger CCCH domain-containing protein 38\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12810\tTb927.10.12810\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tcholinephosphate cytidylyltransferase A, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12810\tTb927.10.12810\t\tGO:0005829\tPMID:20382188\tEXP\t\tC\tcholinephosphate cytidylyltransferase A, putative\t\tmRNA\ttaxon:185431\t20100723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12810\tTb927.10.12810\t\tGO:0006656\tGO_REF:0000012\tISA\tUniProtKB:P49585\tP\tcholinephosphate cytidylyltransferase A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12810\tTb927.10.12810\t\tGO:0070567\tPMID:20382188\tEXP\t\tF\tcholinephosphate cytidylyltransferase A, putative\t\tmRNA\ttaxon:185431\t20100723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12820\tTb927.10.12820\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12830\tNAT3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tN-acetyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12830\tNAT3\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tN-acetyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12830\tNAT3\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tN-acetyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12830\tNAT3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tN-acetyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12830\tNAT3\t\tGO:0006351\tGO_REF:0000011\tISM\tPfam:PF00583\tP\tN-acetyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12830\tNAT3\t\tGO:0008080\tGO_REF:0000011\tISM\tPfam:PF00583\tF\tN-acetyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20110718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0005739\tPMID:29581011\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0006979\tPMID:29581011\tIMP\t\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0015556\tPMID:29581011\tIGI\tUniProtKB:Q06143\tF\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20200313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0015740\tPMID:29581011\tIGI\tUniProtKB:Q06143\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001993\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12850\tTRF\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tttaggg binding factor\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12850\tTRF\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tttaggg binding factor\t\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12850\tTRF\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tttaggg binding factor\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12850\tTRF\t\tGO:0042162\tPMID:29385523\tIDA\t\tF\tttaggg binding factor\t\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12850\tTRF\t\tGO:0070565\tPMID:29385523\tIPI\tGeneDB:Tb927.10.12850\tC\tttaggg binding factor\t\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12870\tBBP120\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12870\tBBP120\t\tGO:0005737\tPMID:29931198\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12870\tBBP120\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12880\tSET5\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 5\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12880\tSET5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSET domain protein 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12880\tSET5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSET domain protein 5\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12890\tTb927.10.12890\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tbifunctional aminoacyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12900\tTb927.10.12900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tComplex 1 protein (LYR family), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12910\tTb927.10.12910\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12910\tTb927.10.12910\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12910\tTb927.10.12910\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12910\tTb927.10.12910\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12910\tTb927.10.12910\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12910\tTb927.10.12910\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12920\tFAZ18\t\tGO:0005929\tPMID:27226595\tIDA\t\tC\tFlagellum attachment zone protein 18\t\tmRNA\ttaxon:185431\t20160603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12920\tFAZ18\t\tGO:0032154\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 18\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12920\tFAZ18\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 18\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12920\tFAZ18\t\tGO:0120119\tPMID:27226595\tIDA\t\tC\tFlagellum attachment zone protein 18\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12930\tTb927.10.12930\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12940\tTb927.10.12940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted zinc finger protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12940\tTb927.10.12940\t\tGO:0005764\tPMID:29346416\tIDA\t\tC\tpredicted zinc finger protein\t\tmRNA\ttaxon:185431\t20180907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12940\tTb927.10.12940\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR001841\tF\tpredicted zinc finger protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12950\tBBP110\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12960\tRAB5A\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tRas-related protein Rab5A\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12960\tRAB5A\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tRas-related protein Rab5A\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12980\tTb927.10.12980\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tMultisite-specific tRNA:(cytosine-C(5))-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12980\tTb927.10.12980\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tMultisite-specific tRNA:(cytosine-C(5))-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12980\tTb927.10.12980\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tMultisite-specific tRNA:(cytosine-C(5))-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12980\tTb927.10.12980\t\tGO:0030488\tGO_REF:0000012\tISA\tUniProtKB:NCL1_YEAST\tP\tMultisite-specific tRNA:(cytosine-C(5))-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12990\tTb927.10.12990\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tpredicted ankyrin repeat family protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12990\tTb927.10.12990\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted ankyrin repeat family protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12990\tTb927.10.12990\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tpredicted ankyrin repeat family protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1300\tTb927.10.1300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13000\tPDEA\t\tGO:0004114\tGO_REF:0000011\tISM\tInterPro:IPR002073\tF\tcAMP phosphodiesterase A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13000\tPDEA\t\tGO:0004115\tGO_REF:0000002\tISO\tGeneDB:LinJ.18.1100\tF\tcAMP phosphodiesterase A, putative\t\tmRNA\ttaxon:185431\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13000\tPDEA\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcAMP phosphodiesterase A, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13000\tPDEA\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:LinJ.18.1100\tC\tcAMP phosphodiesterase A, putative\t\tmRNA\ttaxon:185431\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13000\tPDEA\t\tGO:0007165\tGO_REF:0000011\tISM\tInterPro:IPR002073\tP\tcAMP phosphodiesterase A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13000\tPDEA\t\tGO:2000378\tGO_REF:0000024\tISO\tGeneDB:LinJ.18.1100\tP\tcAMP phosphodiesterase A, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13010\tPKAC3\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tcAMP-dependent protein kinase catalytic subunit 3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13010\tPKAC3\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tcAMP-dependent protein kinase catalytic subunit 3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13010\tPKAC3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcAMP-dependent protein kinase catalytic subunit 3\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13010\tPKAC3\t\tGO:0005952\tPMID:30926779\tIPI\tGeneDB:Tb927.11.4610\tC\tcAMP-dependent protein kinase catalytic subunit 3\t\tmRNA\ttaxon:185431\t20190716\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13010\tPKAC3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcAMP-dependent protein kinase catalytic subunit 3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13010\tPKAC3\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tcAMP-dependent protein kinase catalytic subunit 3\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13020\tTb927.10.13020\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:IPR006926\tC\tVacuolar protein sorting-associated protein 16 homolog, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13020\tTb927.10.13020\t\tGO:0006886\tGO_REF:0000011\tISM\tInterPro:IPR006926\tP\tVacuolar protein sorting-associated protein 16 homolog, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13030\tTb927.10.13030\t\tGO:0004198\tGO_REF:0000011\tISM\tInterPro:IPR001300\tF\tcysteine peptidase, Clan CA, family C2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13030\tTb927.10.13030\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001300\tP\tcysteine peptidase, Clan CA, family C2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13040\tACP4\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13040\tACP4\t\tGO:0004016\tPMID:24879126\tIGI\tUniProtKB:CYAA_YEAST\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20150609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13040\tACP4\t\tGO:0005929\tPMID:24879126\tIDA\t\tC\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20150609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13040\tACP4\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13040\tACP4\t\tGO:0042803\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.16190|GeneDB:Tb927.11.17040\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13070\tTb927.10.13070\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13080\tTb927.10.13080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13080\tTb927.10.13080\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13080\tTb927.10.13080\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13100\tCIF3\t\tGO:0000281\tPMID:31043517\tIMP\t\tP\tCytokinesis initiation factor 3\t\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13100\tCIF3\t\tGO:0005515\tPMID:29764941\tIPI\tGeneDB:Tb927.11.15800\tF\tCytokinesis initiation factor 3\t\tmRNA\ttaxon:185431\t20180524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13100\tCIF3\t\tGO:0032154\tPMID:29764941\tIDA\t\tC\tCytokinesis initiation factor 3\t\tmRNA\ttaxon:185431\t20180524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13100\tCIF3\t\tGO:0032154\tGO_REF:0000109\tIDA\t\tC\tCytokinesis initiation factor 3\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13100\tCIF3\t\tGO:0032465\tPMID:29764941\tIMP\t\tP\tCytokinesis initiation factor 3\t\tmRNA\ttaxon:185431\t20180524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13100\tCIF3\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tCytokinesis initiation factor 3\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13100\tCIF3\t\tGO:0120119\tPMID:29764941\tIDA\t\tC\tCytokinesis initiation factor 3\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13100\tCIF3\t\tGO:0120119\tPMID:31043517\tIDA\t\tC\tCytokinesis initiation factor 3\t\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13100\tCIF3\t\tGO:0120119\tPMID:29931198\tIDA\t\tC\tCytokinesis initiation factor 3\t\tmRNA\ttaxon:185431\t20190111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13110\tLC7\t\tGO:0003777\tGO_REF:0000012\tISA\tUniProtKB:Q8TF09\tF\tDynein light chain roadblock-type\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13110\tLC7\t\tGO:0005868\tGO_REF:0000012\tISA\tUniProtKB:Q8TF09\tC\tDynein light chain roadblock-type\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13110\tLC7\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.18.1010\tC\tDynein light chain roadblock-type\t\tmRNA\ttaxon:185431\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13110\tLC7\t\tGO:0007018\tGO_REF:0000012\tISA\tUniProtKB:Q8TF09\tP\tDynein light chain roadblock-type\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13120\tMCP14\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13120\tMCP14\t\tGO:0005739\tPMID:25946070\tIPI\tGeneDB:Tb927.2.2510\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20160824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13120\tMCP14\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20110718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13120\tMCP14\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13120\tMCP14\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13120\tMCP14\t\tGO:0015824\tPMID:25946070\tIMP\t\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20160824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13120\tMCP14\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001993\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13130\tUGP\t\tGO:0003983\tPMID:20724435\tIDA\t\tF\tUDP-glucose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20110318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13130\tUGP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUDP-glucose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13130\tUGP\t\tGO:0006011\tGO_REF:0000011\tISM\tInterPro:IPR002618\tP\tUDP-glucose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13130\tUGP\t\tGO:0020015\tPMID:20724435\tIDA\t\tC\tUDP-glucose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20110318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13130\tUGP\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tUDP-glucose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13130\tUGP\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tUDP-glucose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13130\tUGP\t\tGO:0046872\tPMID:20724435\tIDA\t\tF\tUDP-glucose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20110318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13130\tUGP\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tUDP-glucose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13140\tTb927.10.13140\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13150\tTb927.10.13150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13160\tgpi18\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGlycosylphosphatidylinositol-anchor biosynthesis protein 18\tPIGV\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13170\tmt-LAF29\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal LSU assembly factor 29\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13180\tTb927.10.13180\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNrap protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13180\tTb927.10.13180\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tNrap protein, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13190\tARPC1\t\tGO:0005198\tGO_REF:0000012\tISA\tUniProtKB:O88656\tF\tactin-related protein 2/3 complex subunit 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13190\tARPC1\t\tGO:0005885\tGO_REF:0000012\tISA\tUniProtKB:O15143\tC\tactin-related protein 2/3 complex subunit 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13190\tARPC1\t\tGO:0030036\tGO_REF:0000012\tISA\tUniProtKB:Q92747\tP\tactin-related protein 2/3 complex subunit 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1320\tTb927.10.1320\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13200\tKRIPP4\t\tGO:0005739\tPMID:17646387\tIDA\t\tC\tkinetoplast ribosomal PPR-repeat containing protein 4\tPPR4\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13200\tKRIPP4\t\tGO:0005739\tPMID:21474072\tIDA\t\tC\tkinetoplast ribosomal PPR-repeat containing protein 4\tPPR4\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13210\tTb927.10.13210\t\tGO:0004582\tPMID:20382188\tIMP\t\tF\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\t\tmRNA\ttaxon:185431\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13210\tTb927.10.13210\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13210\tTb927.10.13210\t\tGO:0005789\tPMID:20382188\tTAS\t\tC\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\t\tmRNA\ttaxon:185431\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13210\tTb927.10.13210\t\tGO:0035268\tPMID:14973778\tIC\t\tP\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\t\tmRNA\ttaxon:185431\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13220\tPPIase\t\tGO:0003755\tGO_REF:0000011\tISM\tPfam:PF00160\tF\tcyclophilin type peptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13220\tPPIase\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tcyclophilin type peptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13220\tPPIase\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:P87051\tP\tcyclophilin type peptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13230\tTb927.10.13230\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13230\tTb927.10.13230\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13240\tTb927.10.13240\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13260\tTb927.10.13260\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13270\tTb927.10.13270\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tPeriodic tryptophan protein 2 homolog, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13270\tTb927.10.13270\t\tGO:0030515\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tF\tPeriodic tryptophan protein 2 homolog, putative\t\tmRNA\ttaxon:185431\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13270\tTb927.10.13270\t\tGO:0032040\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tC\tPeriodic tryptophan protein 2 homolog, putative\t\tmRNA\ttaxon:185431\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13270\tTb927.10.13270\t\tGO:0034388\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tC\tPeriodic tryptophan protein 2 homolog, putative\t\tmRNA\ttaxon:185431\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13280\tTb927.10.13280\t\tGO:0005737\tPMID:29931198\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13280\tTb927.10.13280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13290\tTb927.10.13290\t\tGO:0004307\tPMID:18587155\tIMP\t\tF\tethanolamine phosphotransferase (EPT)\t\tmRNA\ttaxon:185431\t20090429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13290\tTb927.10.13290\t\tGO:0004307\tPMID:20382188\tIMP\t\tF\tethanolamine phosphotransferase (EPT)\t\tmRNA\ttaxon:185431\t20100820\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13290\tTb927.10.13290\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tethanolamine phosphotransferase (EPT)\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13290\tTb927.10.13290\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tethanolamine phosphotransferase (EPT)\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13290\tTb927.10.13290\t\tGO:0006646\tPMID:18587155\tIMP\t\tP\tethanolamine phosphotransferase (EPT)\t\tmRNA\ttaxon:185431\t20090429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13290\tTb927.10.13290\t\tGO:0008654\tGO_REF:0000011\tISM\tInterPro:IPR000462\tP\tethanolamine phosphotransferase (EPT)\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1330\tTb927.10.1330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13300\tMRPS8\t\tGO:0000314\tGO_REF:0000011\tISM\tPfam:PF00410\tC\tMitochondrial ribosomal protein S8\tuS8m\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13300\tMRPS8\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF00410\tF\tMitochondrial ribosomal protein S8\tuS8m\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13300\tMRPS8\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein S8\tuS8m\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13300\tMRPS8\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ribosomal protein S8\tuS8m\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13300\tMRPS8\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein S8\tuS8m\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13300\tMRPS8\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF00410\tP\tMitochondrial ribosomal protein S8\tuS8m\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13300\tMRPS8\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ribosomal protein S8\tuS8m\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13310\tRPB5z\t\tGO:0003899\tGO_REF:0000011\tISM\tInterPro:IPR000783\tF\tDNA-directed RNA polymerase I subunit RPB5z, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13310\tRPB5z\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P20434\tC\tDNA-directed RNA polymerase I subunit RPB5z, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13310\tRPB5z\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA-directed RNA polymerase I subunit RPB5z, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13310\tRPB5z\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase I subunit RPB5z, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13310\tRPB5z\t\tGO:0006351\tGO_REF:0000011\tISM\tInterPro:IPR000783\tP\tDNA-directed RNA polymerase I subunit RPB5z, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13310\tRPB5z\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase I subunit RPB5z, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13310\tRPB5z\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase I subunit RPB5z, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13320\tRPB5\t\tGO:0003899\tPMID:17267688\tIDA\t\tF\tDNA-directed RNA polymerase II/III subunit, putative\t\tmRNA\ttaxon:185431\t20110411\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13320\tRPB5\t\tGO:0005634\tPMID:17267688\tIDA\t\tC\tDNA-directed RNA polymerase II/III subunit, putative\t\tmRNA\ttaxon:185431\t20110411\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13320\tRPB5\t\tGO:0006351\tPMID:17267688\tIDA\t\tP\tDNA-directed RNA polymerase II/III subunit, putative\t\tmRNA\ttaxon:185431\t20110411\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13320\tRPB5\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tDNA-directed RNA polymerase II/III subunit, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13330\tPFC20\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\tparaflagellar rod component, putative\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13330\tPFC20\t\tGO:1990900\tGO_REF:0000109\tIDA\t\tC\tparaflagellar rod component, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13360\tEF-Tu\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tElongation factor Tu, mitochondrial\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13360\tEF-Tu\t\tGO:0005739\tPMID:24033548\tIDA\t\tC\tElongation factor Tu, mitochondrial\t\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13360\tEF-Tu\t\tGO:0006119\tPMID:24033548\tIMP\t\tP\tElongation factor Tu, mitochondrial\t\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13360\tEF-Tu\t\tGO:0032543\tPMID:24033548\tIMP\t\tP\tElongation factor Tu, mitochondrial\t\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13370\tTb927.10.13370\t\tGO:0003777\tGO_REF:0000012\tISA\tUniProtKB:Q15763\tF\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13370\tTb927.10.13370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13370\tTb927.10.13370\t\tGO:0005868\tGO_REF:0000012\tISA\tUniProtKB:Q15763\tC\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13370\tTb927.10.13370\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13370\tTb927.10.13370\t\tGO:0007017\tGO_REF:0000012\tISA\tUniProtKB:Q15763\tP\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13370\tTb927.10.13370\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13380\tORC4L\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tOrigin recognition complex subunit 4-like protein\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13380\tORC4L\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tOrigin recognition complex subunit 4-like protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13390\tTb927.10.13390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1340\tTb927.10.1340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13400\tTb927.10.13400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPhosphatidic acid phostphatase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13410\tTb927.10.13410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13410\tTb927.10.13410\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13420\tTb927.10.13420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13430\tTb927.10.13430\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tcitrate synthase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13430\tTb927.10.13430\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcitrate synthase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13430\tTb927.10.13430\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tcitrate synthase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13440\tTb927.10.13440\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13470\tTb927.10.13470\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPA26 p53-induced protein (sestrin), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13480\tTb927.10.13480\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13480\tTb927.10.13480\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13480\tTb927.10.13480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13480\tTb927.10.13480\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13480\tTb927.10.13480\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13480\tTb927.10.13480\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13480\tTb927.10.13480\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13490\tTb927.10.13490\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13490\tTb927.10.13490\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13490\tTb927.10.13490\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13490\tTb927.10.13490\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13490\tTb927.10.13490\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1350\tTb927.10.1350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13500\tTb927.10.13500\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002143\tF\t60S ribosomal protein L10a\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13500\tTb927.10.13500\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L10a\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13500\tTb927.10.13500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L10a\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13500\tTb927.10.13500\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002143\tC\t60S ribosomal protein L10a\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13500\tTb927.10.13500\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002143\tP\t60S ribosomal protein L10a\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13510\tFtsH13\t\tGO:0005743\tPMID:32437726\tIDA\t\tC\tzinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20220106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13540\tRBP12\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13540\tRBP12\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13540\tRBP12\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13540\tRBP12\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13550\tTb927.10.13550\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13550\tTb927.10.13550\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13560\tERG19\t\tGO:0004163\tGO_REF:0000011\tISM\tInterPro:IPR005935\tF\tmevalonate-diphosphate decarboxylase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13560\tERG19\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR006204\tF\tmevalonate-diphosphate decarboxylase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13560\tERG19\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tmevalonate-diphosphate decarboxylase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13560\tERG19\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmevalonate-diphosphate decarboxylase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13560\tERG19\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tmevalonate-diphosphate decarboxylase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13560\tERG19\t\tGO:0016301\tGO_REF:0000011\tISM\tInterPro:IPR006204\tF\tmevalonate-diphosphate decarboxylase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13560\tERG19\t\tGO:0016310\tGO_REF:0000011\tISM\tInterPro:IPR006204\tP\tmevalonate-diphosphate decarboxylase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13570\tRBP27\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR000504\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13570\tRBP27\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13580\tTb927.10.13580\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR007114\tP\tmajor facilitator superfamily protein (MFS), putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13580\tTb927.10.13580\t\tGO:0016021\tGO_REF:0000002\tISM\tInterPro:IPR011701\tC\tmajor facilitator superfamily protein (MFS), putative\t\tmRNA\ttaxon:185431\t20140919\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13600\tCLDP18\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCardiolipin-dependent protein 18kDa\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13600\tCLDP18\t\tGO:0005739\tPMID:31536395\tIDA\t\tC\tCardiolipin-dependent protein 18kDa\t\tmRNA\ttaxon:185431\t20191115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13600\tCLDP18\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tCardiolipin-dependent protein 18kDa\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13600\tCLDP18\t\tGO:0005743\tPMID:31536395\tTAS\t\tC\tCardiolipin-dependent protein 18kDa\t\tmRNA\ttaxon:185431\t20191115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13610\tTb927.10.13610\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR007087\tF\tzinc-finger of a C2HC-type/Double zinc ribbon, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13610\tTb927.10.13610\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tzinc-finger of a C2HC-type/Double zinc ribbon, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13610\tTb927.10.13610\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tzinc-finger of a C2HC-type/Double zinc ribbon, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13610\tTb927.10.13610\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tzinc-finger of a C2HC-type/Double zinc ribbon, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13620\tNDUFA9\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tnadh-ubiquinone oxidoreductase 39 kda subunit\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13620\tNDUFA9\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tnadh-ubiquinone oxidoreductase 39 kda subunit\t\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13620\tNDUFA9\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tnadh-ubiquinone oxidoreductase 39 kda subunit\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13620\tNDUFA9\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tnadh-ubiquinone oxidoreductase 39 kda subunit\t\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13630\tTb927.10.13630\t\tGO:0004553\tGO_REF:0000011\tISM\tInterPro:IPR000322\tF\tglucosidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13630\tTb927.10.13630\t\tGO:0005975\tGO_REF:0000011\tISM\tInterPro:IPR000322\tP\tglucosidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13650\tTb927.10.13650\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor-like protein 2-binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13650\tTb927.10.13650\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor-like protein 2-binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13650\tTb927.10.13650\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor-like protein 2-binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13670\tPP5\t\tGO:0005515\tPMID:18193284\tIPI\tGeneDB:Tb927.10.10980\tF\tserine/threonine protein phosphatase 5\t\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13670\tPP5\t\tGO:0005634\tPMID:18193284\tIDA\t\tC\tserine/threonine protein phosphatase 5\t\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13670\tPP5\t\tGO:0005737\tPMID:11290414\tIDA\t\tC\tserine/threonine protein phosphatase 5\t\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13670\tPP5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tserine/threonine protein phosphatase 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13680\tTb927.10.13680\t\tGO:0004806\tGO_REF:0000011\tISM\tInterPro:IPR002921\tF\tlipase domain protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13680\tTb927.10.13680\t\tGO:0006629\tGO_REF:0000011\tISM\tInterPro:IPR002921\tP\tlipase domain protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1370\tTb927.10.1370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1370\tTb927.10.1370\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13700\tTb927.10.13700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphatidic acid phosphatase alpha, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13700\tTb927.10.13700\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tphosphatidic acid phosphatase alpha, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13710\tTb927.10.13710\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tActivator of Hsp90 ATPase, N-terminal/Activator of Hsp90 ATPase homolog 1-like protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13710\tTb927.10.13710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tActivator of Hsp90 ATPase, N-terminal/Activator of Hsp90 ATPase homolog 1-like protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13720\tRBP29\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein 29, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13720\tRBP29\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tRNA-binding protein 29, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13720\tRBP29\t\tGO:0005634\tPMID:26287607\tIDA\t\tC\tRNA-binding protein 29, putative\t\tmRNA\ttaxon:185431\t20200402\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13720\tRBP29\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA-binding protein 29, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13720\tRBP29\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein 29, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13720\tRBP29\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein 29, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13720\tRBP29\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tRNA-binding protein 29, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13730\tTb927.10.13730\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF00327\tF\t60S ribosomal protein L7, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13730\tTb927.10.13730\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L7, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13730\tTb927.10.13730\t\tGO:0005840\tGO_REF:0000011\tISM\tPfam:PF00327\tC\t60S ribosomal protein L7, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13730\tTb927.10.13730\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF00327\tP\t60S ribosomal protein L7, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13740\tFAZ35\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 35\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13740\tFAZ35\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tFlagellum attachment zone protein 35\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13770\tTb927.10.13770\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13770\tTb927.10.13770\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0000278\tPMID:30910902\tIMP\t\tP\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0000281\tPMID:30910902\tIMP\t\tP\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0004674\tPMID:18644955\tEXP\t\tF\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20090401\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0005634\tPMID:30910902\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0005737\tPMID:30910902\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0005929\tPMID:30910902\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0005930\tPMID:30910902\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0020023\tPMID:30910902\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0036064\tPMID:30910902\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13790\tTb927.10.13790\t\tGO:0000910\tPMID:30153427\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13790\tTb927.10.13790\t\tGO:0007050\tPMID:30153427\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13790\tTb927.10.13790\t\tGO:0044782\tPMID:30153427\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1380\tNEK19\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSerine/threonine-protein kinase NEK19, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1380\tNEK19\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSerine/threonine-protein kinase NEK19, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1380\tNEK19\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSerine/threonine-protein kinase NEK19, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1380\tNEK19\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK19, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13800\tTb927.10.13800\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13800\tTb927.10.13800\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13810\tTb927.10.13810\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13810\tTb927.10.13810\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13820\tTb927.10.13820\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tDomain of unknown function (DUF4379), putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13820\tTb927.10.13820\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tDomain of unknown function (DUF4379), putative\t\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0006626\tPMID:32105215\tIMP\t\tP\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20200722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13850\tTb927.10.13850\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tATP12 chaperone protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13850\tTb927.10.13850\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tATP12 chaperone protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13860\tTb927.10.13860\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tGPI-anchor transamidase subunit 8 (GPI8)\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13860\tTb927.10.13860\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tGPI-anchor transamidase subunit 8 (GPI8)\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13870\tTb927.10.13870\t\tGO:0004835\tGO_REF:0000011\tISM\tInterPro:IPR004344\tF\ttubulin tyrosine ligase protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13870\tTb927.10.13870\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004344\tP\ttubulin tyrosine ligase protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13880\tTb927.10.13880\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13890\tTb927.10.13890\t\tGO:1990900\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0000310\tPMID:31287615\tIDA\t\tF\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20200724\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0004422\tPMID:31287615\tIDA\t\tF\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20200724\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0004422\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tF\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q07010\tC\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0006166\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tP\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0020015\tPMID:29474435\tIDA\t\tC\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20180823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0020022\tGO_REF:0000109\tISM\t\tC\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0052657\tPMID:31287615\tIDA\t\tF\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20200724\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13900\tNST1\t\tGO:0000139\tGO_REF:0000024\tISO\tGeneDB:LmjF.18.0400\tC\tUDP-Gal transporter\tLPG5B\tmRNA\ttaxon:185431\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13900\tNST1\t\tGO:0005459\tGO_REF:0000024\tISO\tGeneDB:LmjF.18.0400\tF\tUDP-Gal transporter\tLPG5B\tmRNA\ttaxon:185431\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13900\tNST1\t\tGO:0005459\tPMID:23443657\tIDA\t\tF\tUDP-Gal transporter\tLPG5B\tmRNA\ttaxon:185431\t20170925\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13900\tNST1\t\tGO:0005462\tPMID:23443657\tIDA\t\tF\tUDP-Gal transporter\tLPG5B\tmRNA\ttaxon:185431\t20170925\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13900\tNST1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUDP-Gal transporter\tLPG5B\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13900\tNST1\t\tGO:0072334\tGO_REF:0000024\tISO\tGeneDB:LmjF.18.0400\tP\tUDP-Gal transporter\tLPG5B\tmRNA\ttaxon:185431\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13910\tTb927.10.13910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13910\tTb927.10.13910\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13920\tTb927.10.13920\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13930\tESP21\t\tGO:0005768\tPMID:25931509\tIDA\t\tC\tphosphatidic acid phosphatase, putative\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13930\tESP21\t\tGO:0006644\tGO_REF:0000012\tISA\tUniProtKB:Q05521\tP\tphosphatidic acid phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13930\tESP21\t\tGO:0008195\tGO_REF:0000012\tISA\tUniProtKB:Q05521\tF\tphosphatidic acid phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13930\tESP21\t\tGO:0020016\tPMID:25931509\tIDA\t\tC\tphosphatidic acid phosphatase, putative\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13960\tPF20\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tparalyzed flagella protein 20\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13960\tPF20\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tparalyzed flagella protein 20\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13960\tPF20\t\tGO:0007018\tGO_REF:0000012\tISA\tUniProtKB:Q13409\tP\tparalyzed flagella protein 20\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13960\tPF20\t\tGO:0060285\tPMID:16607017\tIMP\t\tP\tparalyzed flagella protein 20\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13960\tPF20\t\tGO:0060294\tPMID:16882690\tIMP\t\tP\tparalyzed flagella protein 20\t\tmRNA\ttaxon:185431\t20150731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13970\tTb927.10.13970\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\turacil-DNA glycosylase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13980\tTb927.10.13980\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tbtb/poz domain containing protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13990\tTb927.10.13990\t\tGO:0005739\tPMID:17646387\tISM\t\tC\tPentatricopeptide repeat protein (PPR), putative\t\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0004422\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tF\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q07010\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0005829\tPMID:29481567\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20180823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0006166\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tP\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14000\tACO\t\tGO:0003994\tPMID:10644738\tEXP\t\tF\taconitase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14000\tACO\t\tGO:0005739\tPMID:10644738\tIDA\t\tC\taconitase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14000\tACO\t\tGO:0005829\tPMID:10644738\tIDA\t\tC\taconitase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14000\tACO\t\tGO:0006099\tPMID:10644738\tEXP\t\tP\taconitase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14010\trp2\t\tGO:0000902\tPMID:24257747\tIMP\t\tP\ttubulin cofactor C domain-containing protein RP2\t\tmRNA\ttaxon:185431\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14010\trp2\t\tGO:0005096\tPMID:24257747\tIMP\t\tF\ttubulin cofactor C domain-containing protein RP2\t\tmRNA\ttaxon:185431\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14010\trp2\t\tGO:0036064\tPMID:17645436|PMID:24257747\tIDA\t\tC\ttubulin cofactor C domain-containing protein RP2\t\tmRNA\ttaxon:185431\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14010\trp2\t\tGO:0044458\tPMID:17645436\tIMP\t\tP\ttubulin cofactor C domain-containing protein RP2\t\tmRNA\ttaxon:185431\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14010\trp2\t\tGO:0051225\tPMID:17645436\tIMP\t\tP\ttubulin cofactor C domain-containing protein RP2\t\tmRNA\ttaxon:185431\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14010\trp2\t\tGO:0097537\tPMID:17645436|PMID:24257747\tIDA\t\tC\ttubulin cofactor C domain-containing protein RP2\t\tmRNA\ttaxon:185431\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14020\tTb927.10.14020\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14030\tTb927.10.14030\t\tGO:0005515\tPMID:26272611\tIPI\tGeneDB:Tb927.7.6310\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14030\tTb927.10.14030\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14030\tTb927.10.14030\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14040\tTb927.10.14040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tvacuolar ATP synthase subunit c, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14040\tTb927.10.14040\t\tGO:0015986\tGO_REF:0000011\tISM\tInterPro:IPR004907\tP\tvacuolar ATP synthase subunit c, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14040\tTb927.10.14040\t\tGO:0016469\tGO_REF:0000024\tISS\t\tC\tvacuolar ATP synthase subunit c, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14040\tTb927.10.14040\t\tGO:0016820\tGO_REF:0000011\tISM\tInterPro:IPR004907\tF\tvacuolar ATP synthase subunit c, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14050\tTb927.10.14050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14050\tTb927.10.14050\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14070\tTb927.10.14070\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmevalonate diphosphate decarboxylase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14080\tRBP27\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA-binding protein 27, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14080\tRBP27\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein 27, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1410\tTb927.10.1410\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1410\tTb927.10.1410\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14100\tTb927.10.14100\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14100\tTb927.10.14100\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14100\tTb927.10.14100\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14110\tDIP13\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\t13 kDa deflagellation-inducible protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14110\tDIP13\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\t13 kDa deflagellation-inducible protein, putative\t\tmRNA\ttaxon:185431\t20170105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14110\tDIP13\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\t13 kDa deflagellation-inducible protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14110\tDIP13\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\t13 kDa deflagellation-inducible protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14120\tTb927.10.14120\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14120\tTb927.10.14120\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14120\tTb927.10.14120\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14130\tTb927.10.14130\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tSRP19 protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14140\tPYK1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tpyruvate kinase 1\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14140\tPYK1\t\tGO:0004743\tPMID:1879424\tTAS\t\tF\tpyruvate kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14140\tPYK1\t\tGO:0005737\tPMID:1879424\tTAS\t\tC\tpyruvate kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14140\tPYK1\t\tGO:0006096\tPMID:1879424\tTAS\t\tP\tpyruvate kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tF\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0005783\tPMID:32095321\tIDA\t\tC\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20200312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0005844\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tC\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0007059\tGO_REF:0000050\tISM\tJCVI_TIGRFAMS:TIGR02168\tP\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20140919\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0007088\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tP\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0030529\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tC\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0042175\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tC\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0051321\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tP\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14160\tAQP3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAquaglyceroporin 3\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14160\tAQP3\t\tGO:0005886\tPMID:22711816\tIDA\t\tC\tAquaglyceroporin 3\t\tmRNA\ttaxon:185431\t20131120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14160\tAQP3\t\tGO:0015250\tPMID:15294911\tIMP\t\tF\tAquaglyceroporin 3\t\tmRNA\ttaxon:185431\t20131120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14160\tAQP3\t\tGO:0015254\tPMID:15294911\tIMP\t\tF\tAquaglyceroporin 3\t\tmRNA\ttaxon:185431\t20131120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14160\tAQP3\t\tGO:0015793\tPMID:15294911\tIMP\t\tP\tAquaglyceroporin 3\t\tmRNA\ttaxon:185431\t20131120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14160\tAQP3\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tAquaglyceroporin 3\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0005372\tPMID:15294911\tIDA\t\tF\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20101103\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0005886\tPMID:22711816\tIDA\t\tC\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20131120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0015250\tPMID:15294911\tIMP\t\tF\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20131120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0015250\tPMID:15294911\tIDA\t\tF\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20101103\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0015254\tPMID:15294911\tIMP\t\tF\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20131120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0015793\tPMID:15294911\tIMP\t\tP\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20131120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0020016\tPMID:22711816\tIDA\t\tC\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20131120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14180\tSEC13\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tprotein transport protein SEC13\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14180\tSEC13\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tprotein transport protein SEC13\t\tmRNA\ttaxon:185431\t20170211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14180\tSEC13\t\tGO:0006886\tGO_REF:0000012\tISA\tUniProtKB:P53024\tP\tprotein transport protein SEC13\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14180\tSEC13\t\tGO:0006900\tPMID:8432727\tISA\tUniProtKB:SEC13_YEAST\tP\tprotein transport protein SEC13\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14180\tSEC13\t\tGO:0031080\tPMID:26891179\tIPI\tGeneDB:Tb927.11.2950\tC\tprotein transport protein SEC13\t\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14190\tTb927.10.14190\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14190\tTb927.10.14190\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1420\tMetAP2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmetallo-peptidase, Clan MG, Family M24\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1420\tMetAP2\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR000994\tP\tmetallo-peptidase, Clan MG, Family M24\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1420\tMetAP2\t\tGO:0008237\tGO_REF:0000011\tISM\tInterPro:IPR000994\tF\tmetallo-peptidase, Clan MG, Family M24\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14200\tTb927.10.14200\t\tGO:0005484\tPMID:11950882\tISA\tUniProtKB:Q9LK09\tF\tsyntaxin 5\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14200\tTb927.10.14200\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tsyntaxin 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14200\tTb927.10.14200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsyntaxin 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14200\tTb927.10.14200\t\tGO:0016020\tGO_REF:0000012\tISA\tUniProtKB:STX5_MOUSE\tC\tsyntaxin 5\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14200\tTb927.10.14200\t\tGO:0061025\tGO_REF:0000012\tISA\tUniProtKB:Q9SWH4\tP\tsyntaxin 5\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14200\tTb927.10.14200\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tsyntaxin 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14210\tTFB5\t\tGO:0003700\tPMID:19386623\tEXP\t\tF\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20100917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14210\tTFB5\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14210\tTFB5\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14210\tTFB5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14230\tTb927.10.14230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14230\tTb927.10.14230\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14240\tNMT\t\tGO:0019107\tPMID:20360736\tEXP\t\tF\tN-myristoyltransferase\t\tmRNA\ttaxon:185431\t20100406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14250\tTb927.10.14250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14250\tTb927.10.14250\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14250\tTb927.10.14250\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14250\tTb927.10.14250\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14260\tTb927.10.14260\t\tGO:0006886\tGO_REF:0000011\tISM\tInterPro:IPR000804\tP\tAP-4 complex subunit sigma-1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14260\tTb927.10.14260\t\tGO:0030124\tGO_REF:0000012\tISA\tUniProtKB:Q9Y587\tC\tAP-4 complex subunit sigma-1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14260\tTb927.10.14260\t\tGO:0030125\tGO_REF:0000011\tISM\tInterPro:IPR000804\tC\tAP-4 complex subunit sigma-1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14270\tTb927.10.14270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14280\tMCP20\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14280\tMCP20\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14280\tMCP20\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14280\tMCP20\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001993\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14290\tTb927.10.14290\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14300\tMRK1\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tMEKK-related kinase 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14300\tMRK1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tMEKK-related kinase 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14300\tMRK1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMEKK-related kinase 1, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14300\tMRK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tMEKK-related kinase 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14300\tMRK1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tMEKK-related kinase 1, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14310\tTb927.10.14310\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14320\tFAZ9\t\tGO:0005515\tPMID:25972344\tIPI\tGeneDB:Tb927.4.3740\tF\tArmadillo/beta-catenin-like repeat, putative\t\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14320\tFAZ9\t\tGO:0005856\tPMID:25972344\tIDA\t\tC\tArmadillo/beta-catenin-like repeat, putative\t\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14320\tFAZ9\t\tGO:0005929\tPMID:25736289\tIDA\t\tC\tArmadillo/beta-catenin-like repeat, putative\t\tmRNA\ttaxon:185431\t20160603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14320\tFAZ9\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tArmadillo/beta-catenin-like repeat, putative\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14320\tFAZ9\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tArmadillo/beta-catenin-like repeat, putative\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14320\tFAZ9\t\tGO:0120119\tPMID:25972344\tIDA\t\tC\tArmadillo/beta-catenin-like repeat, putative\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14320\tFAZ9\t\tGO:0120119\tPMID:25736289\tIDA\t\tC\tArmadillo/beta-catenin-like repeat, putative\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14330\tTb927.10.14330\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tUtp14 protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14330\tTb927.10.14330\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tUtp14 protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14330\tTb927.10.14330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUtp14 protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14330\tTb927.10.14330\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tUtp14 protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14350\tTb927.10.14350\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14350\tTb927.10.14350\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14350\tTb927.10.14350\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14360\tU2_40K\t\tGO:0003729\tPMID:8458336|PMID:1833773\tIDA\t\tF\tU2 small nuclear ribonucleoprotein 40K\tU2A\tmRNA\ttaxon:185431\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14360\tU2_40K\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tU2 small nuclear ribonucleoprotein 40K\tU2A\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14360\tU2_40K\t\tGO:0005686\tPMID:8458336|PMID:1833773\tIDA\t\tC\tU2 small nuclear ribonucleoprotein 40K\tU2A\tmRNA\ttaxon:185431\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14360\tU2_40K\t\tGO:0045292\tPMID:8458336\tISS\tUniProtKB:RU2A_HUMAN\tP\tU2 small nuclear ribonucleoprotein 40K\tU2A\tmRNA\ttaxon:185431\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14370\tTb927.10.14370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14370\tTb927.10.14370\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14370\tTb927.10.14370\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14390\tPOB3\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tHistone chaperone Rttp106-like, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14390\tPOB3\t\tGO:0035101\tPMID:25266856\tIPI\tGeneDB:Tb927.2.5810\tC\tHistone chaperone Rttp106-like, putative\t\tmRNA\ttaxon:185431\t20181206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1440\tTb927.10.1440\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14400\tTb927.10.14400\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14410\tTb927.10.14410\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14420\tNEK16\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSerine/threonine-protein kinase NEK16, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14420\tNEK16\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSerine/threonine-protein kinase NEK16, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14420\tNEK16\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSerine/threonine-protein kinase NEK16, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14420\tNEK16\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK16, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14420\tNEK16\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\tSerine/threonine-protein kinase NEK16, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14430\tTb927.10.14430\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14440\tb9d1\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tb9 domain-containing protein 1\tmksr1|MKS1-R2\tmRNA\ttaxon:185431\t20161202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14450\tTb927.10.14450\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14470\tIFT140\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tintraflagellar transport protein 140\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14470\tIFT140\t\tGO:0035721\tPMID:18094047\tIMP\t\tP\tintraflagellar transport protein 140\t\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14470\tIFT140\t\tGO:0035735\tPMID:18094047\tIMP\t\tP\tintraflagellar transport protein 140\t\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14490\tTb927.10.14490\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1450\tCAAP1\t\tGO:0005856\tPMID:23264645\tIDA\t\tC\tCentrin arm-associated protein 1\t\tmRNA\ttaxon:185431\t20170915\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1450\tCAAP1\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tCentrin arm-associated protein 1\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1450\tCAAP1\t\tGO:0120120\tPMID:23264645\tIDA\t\tC\tCentrin arm-associated protein 1\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1450\tCAAP1\t\tGO:0120269\tPMID:32675283\tIDA\t\tC\tCentrin arm-associated protein 1\t\tmRNA\ttaxon:185431\t20210107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14500\tTb927.10.14500\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14510\tTb927.10.14510\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\troot hair defective 3 GTP-binding protein (RHD3), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14510\tTb927.10.14510\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\troot hair defective 3 GTP-binding protein (RHD3), putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14520\tBBP52\t\tGO:0036064\tPMID:20300570\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20110223\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14530\tRpn8\t\tGO:0004175\tGO_REF:0000012\tISA\tUniProtKB:Q9W178\tF\t19S proteasome non-atpase subunit 8\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14530\tRpn8\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\t19S proteasome non-atpase subunit 8\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14530\tRpn8\t\tGO:0006511\tPMID:12213827\tIMP\t\tP\t19S proteasome non-atpase subunit 8\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14530\tRpn8\t\tGO:0016049\tPMID:12213827\tIMP\t\tP\t19S proteasome non-atpase subunit 8\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0005634\tPMID:22366449\tIDA\t\tC\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20160622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0005737\tPMID:22366449\tIDA\t\tC\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20160622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0010494\tPMID:26187993\tIDA\t\tC\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0034399\tPMID:22366449\tIDA\t\tC\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20160622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0097165\tPMID:22366449\tIDA\t\tC\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20160622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14580\tTb927.10.14580\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01038\tF\t60S ribosomal protein L17, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14580\tTb927.10.14580\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L17, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14580\tTb927.10.14580\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L17, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14580\tTb927.10.14580\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01038\tP\t60S ribosomal protein L17, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14590\tTb927.10.14590\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF1279), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1460\tTb927.10.1460\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1460\tTb927.10.1460\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1460\tTb927.10.1460\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1460\tTb927.10.1460\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14600\tRPS2\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR005711\tF\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14600\tRPS2\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000851\tC\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14600\tRPS2\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000851\tC\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14600\tRPS2\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR005711\tP\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14630\tTb927.10.14630\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR000692\tF\tfibrillarin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14630\tTb927.10.14630\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P35549\tC\tfibrillarin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14630\tTb927.10.14630\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tfibrillarin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14630\tTb927.10.14630\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tfibrillarin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14630\tTb927.10.14630\t\tGO:0005730\tPMID:28034897\tIDA\t\tC\tfibrillarin, putative\t\tmRNA\ttaxon:185431\t20170201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14630\tTb927.10.14630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tfibrillarin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14630\tTb927.10.14630\t\tGO:0006364\tGO_REF:0000011\tISM\tInterPro:IPR000692\tP\tfibrillarin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14630\tTb927.10.14630\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tfibrillarin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14640\tTb927.10.14640\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRtf2 RING-finger, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14640\tTb927.10.14640\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tRtf2 RING-finger, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14660\tTb927.10.14660\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14660\tTb927.10.14660\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14670\tTb927.10.14670\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14680\tTb927.10.14680\t\tGO:0000027\tGO_REF:0000012\tISA\tUniProtKB:Q08235\tP\tribosome biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14680\tTb927.10.14680\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tribosome biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14680\tTb927.10.14680\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:Q08235\tC\tribosome biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14680\tTb927.10.14680\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tribosome biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14680\tTb927.10.14680\t\tGO:0019843\tGO_REF:0000012\tISA\tUniProtKB:Q08235\tF\tribosome biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14690\tTb927.10.14690\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsyntaxin, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14690\tTb927.10.14690\t\tGO:0016020\tGO_REF:0000012\tISA\tUniProtKB:Q94KK6\tC\tsyntaxin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14690\tTb927.10.14690\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:Q94KK6\tP\tsyntaxin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14690\tTb927.10.14690\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tsyntaxin, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14690\tTb927.10.14690\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tsyntaxin, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0004422\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tF\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q07010\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0006166\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tP\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0020015\tPMID:18242729\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20160919\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0020015\tPMID:29474435\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20180823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14700\tTb927.10.14700\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14700\tTb927.10.14700\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14700\tTb927.10.14700\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14700\tTb927.10.14700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14700\tTb927.10.14700\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14710\tRPS2\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR005711\tF\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14710\tRPS2\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000851\tC\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14710\tRPS2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14710\tRPS2\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000851\tC\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14710\tRPS2\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR005711\tP\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14720\tPEX13\t\tGO:0005783\tPMID:27339640\tIDA\t\tC\tperoxin 13\t\tmRNA\ttaxon:185431\t20170914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14720\tPEX13\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tperoxin 13\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14720\tPEX13\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tperoxin 13\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14720\tPEX13\t\tGO:0020015\tPMID:27339640\tIDA\t\tC\tperoxin 13\t\tmRNA\ttaxon:185431\t20170914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14730\tJ15\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14730\tJ15\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14750\tFIB2\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR000692\tF\tFibrillarin 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14750\tFIB2\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P35549\tC\tFibrillarin 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14750\tFIB2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tFibrillarin 2\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14750\tFIB2\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tFibrillarin 2\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14750\tFIB2\t\tGO:0005730\tPMID:35013170\tIDA\t\tC\tFibrillarin 2\t\tmRNA\ttaxon:185431\t20220422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14750\tFIB2\t\tGO:0006364\tGO_REF:0000011\tISM\tInterPro:IPR000692\tP\tFibrillarin 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14750\tFIB2\t\tGO:0015030\tPMID:35013170\tIDA\t\tC\tFibrillarin 2\t\tmRNA\ttaxon:185431\t20220422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14750\tFIB2\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tFibrillarin 2\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0004672\tPMID:25681612\tIDA\t\tF\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20150708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0008017\tPMID:25681612\tIDA\t\tF\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20150708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0042803\tPMID:25681612\tIDA\t\tF\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20150708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0046777\tPMID:25681612\tIDA\t\tP\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20150708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14780\tCBPK1\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tmitogen-activated protein kinase kinase kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14780\tCBPK1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tmitogen-activated protein kinase kinase kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14780\tCBPK1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitogen-activated protein kinase kinase kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14780\tCBPK1\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tmitogen-activated protein kinase kinase kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14780\tCBPK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase kinase kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14790\tTb927.10.14790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmetallo-peptidase, Clan MG, Family M24\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1480\tTb927.10.1480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14800\tMPK9\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tmitogen-activated protein kinase 9, putative\tMAPK9\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14800\tMPK9\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tmitogen-activated protein kinase 9, putative\tMAPK9\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14800\tMPK9\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitogen-activated protein kinase 9, putative\tMAPK9\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14800\tMPK9\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase 9, putative\tMAPK9\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14810\tmbf1\t\tGO:0003677\tGO_REF:0000002\tISM\tPfam:PF01381\tF\tmultiprotein-bridging factor 1, putative\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14810\tmbf1\t\tGO:0003713\tGO_REF:0000002\tISS\tUniProtKB:MBF1_YEAST\tF\tmultiprotein-bridging factor 1, putative\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14810\tmbf1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tmultiprotein-bridging factor 1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14810\tmbf1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmultiprotein-bridging factor 1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14810\tmbf1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tmultiprotein-bridging factor 1, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14810\tmbf1\t\tGO:0045944\tGO_REF:0000002\tISS\tUniProtKB:MBF1_YEAST\tP\tmultiprotein-bridging factor 1, putative\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14810\tmbf1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tmultiprotein-bridging factor 1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14820\tMCP5c\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5c\t\tmRNA\ttaxon:185431\t20110718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14820\tMCP5c\t\tGO:0005739\tPMID:23074217\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5c\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14820\tMCP5c\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5c\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14820\tMCP5c\t\tGO:0005739\tPMID:32184243\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5c\t\tmRNA\ttaxon:185431\t20200626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14820\tMCP5c\t\tGO:0005743\tGO_REF:0000011\tISM\tInterPro:IPR002067\tC\tMitochondrial ADP/ATP carrier protein 5c\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14820\tMCP5c\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tMitochondrial ADP/ATP carrier protein 5c\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14830\tMCP5b\t\tGO:0005739\tPMID:23074217\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5b\t\tmRNA\ttaxon:185431\t20170526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14830\tMCP5b\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5b\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14830\tMCP5b\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5b\t\tmRNA\ttaxon:185431\t20141009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14830\tMCP5b\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tMitochondrial ADP/ATP carrier protein 5b\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14830\tMCP5b\t\tGO:0005743\tGO_REF:0000011\tISM\tInterPro:IPR002067\tC\tMitochondrial ADP/ATP carrier protein 5b\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14830\tMCP5b\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tMitochondrial ADP/ATP carrier protein 5b\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14840\tMCP5a\t\tGO:0005739\tPMID:23074217\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5a\t\tmRNA\ttaxon:185431\t20170526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14840\tMCP5a\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5a\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14840\tMCP5a\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tMitochondrial ADP/ATP carrier protein 5a\t\tmRNA\ttaxon:185431\t20141009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14840\tMCP5a\t\tGO:0005743\tGO_REF:0000011\tISM\tInterPro:IPR002067\tC\tMitochondrial ADP/ATP carrier protein 5a\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14840\tMCP5a\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tMitochondrial ADP/ATP carrier protein 5a\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14860\tNDUFA6\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-ubiquinone oxidoreductase B14 subunit\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14860\tNDUFA6\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase B14 subunit\t\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14860\tNDUFA6\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH-ubiquinone oxidoreductase B14 subunit\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14860\tNDUFA6\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase B14 subunit\t\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14870\tTb927.10.14870\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14880\tCEP104\t\tGO:0097542\tPMID:32682799\tIDA\t\tC\tComponent of motile flagella 59\tACS3|CMF59\tmRNA\ttaxon:185431\t20210730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14880\tCEP104\t\tGO:0097542\tGO_REF:0000024\tISO\tGeneDB:LmxM.19.0250\tC\tComponent of motile flagella 59\tACS3|CMF59\tmRNA\ttaxon:185431\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14890\tKIFC1\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tC-terminal motor kinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14890\tKIFC1\t\tGO:0005524\tPMID:11581257\tTAS\t\tF\tC-terminal motor kinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14890\tKIFC1\t\tGO:0005737\tPMID:11581257\tIDA\t\tC\tC-terminal motor kinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14890\tKIFC1\t\tGO:0005871\tPMID:16481395\tEXP\t\tC\tC-terminal motor kinesin, putative\t\tmRNA\ttaxon:185431\t20110420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14890\tKIFC1\t\tGO:0005881\tPMID:11581257\tTAS\t\tC\tC-terminal motor kinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14890\tKIFC1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tC-terminal motor kinesin, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1490\tMKT1L\t\tGO:0035061\tPMID:20592024\tIDA\t\tC\tTemperature dependent protein affecting M2 dsRNA replication, putative\t\tmRNA\ttaxon:185431\t20180124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1490\tMKT1L\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tTemperature dependent protein affecting M2 dsRNA replication, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14900\tMKT1L\t\tGO:0005737\tPMID:32532821\tIDA\t\tC\tMKT1-like protein\t\tmRNA\ttaxon:185431\t20210923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14900\tMKT1L\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tMKT1-like protein\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14910\tTb927.10.14910\t\tGO:0005509\tGO_REF:0000012\tISA\tUniProtKB:Q9WVK4\tF\tSarcalumenin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14910\tTb927.10.14910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSarcalumenin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14910\tTb927.10.14910\t\tGO:0016197\tGO_REF:0000012\tISA\tUniProtKB:Q9WVK4\tP\tSarcalumenin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14910\tTb927.10.14910\t\tGO:0016529\tGO_REF:0000012\tISA\tUniProtKB:Q9WVK4\tC\tSarcalumenin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14930\tZC3H39\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tZinc finger CCCH domain-containing protein 39\tCSBPA\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14930\tZC3H39\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tZinc finger CCCH domain-containing protein 39\tCSBPA\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14930\tZC3H39\t\tGO:0005737\tPMID:31127277\tIDA\t\tC\tZinc finger CCCH domain-containing protein 39\tCSBPA\tmRNA\ttaxon:185431\t20190731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14930\tZC3H39\t\tGO:0010608\tPMID:31127277\tIMP\t\tP\tZinc finger CCCH domain-containing protein 39\tCSBPA\tmRNA\ttaxon:185431\t20190731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14930\tZC3H39\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tZinc finger CCCH domain-containing protein 39\tCSBPA\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14930\tZC3H39\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tZinc finger CCCH domain-containing protein 39\tCSBPA\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14930\tZC3H39\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tZinc finger CCCH domain-containing protein 39\tCSBPA\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14950\tZC3H40\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tZinc finger CCCH domain-containing protein 40\tCSBPB\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14950\tZC3H40\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tZinc finger CCCH domain-containing protein 40\tCSBPB\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14950\tZC3H40\t\tGO:0005737\tPMID:31127277\tIDA\t\tC\tZinc finger CCCH domain-containing protein 40\tCSBPB\tmRNA\ttaxon:185431\t20190731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14950\tZC3H40\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tZinc finger CCCH domain-containing protein 40\tCSBPB\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14950\tZC3H40\t\tGO:0010608\tPMID:31127277\tIMP\t\tP\tZinc finger CCCH domain-containing protein 40\tCSBPB\tmRNA\ttaxon:185431\t20190731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14950\tZC3H40\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tZinc finger CCCH domain-containing protein 40\tCSBPB\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14960\tTb927.10.14960\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14960\tTb927.10.14960\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14960\tTb927.10.14960\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0030992\tPMID:20923419\tIPI\tGeneDB:Tb927.3.3000\tC\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:LmxM.19.0320\tC\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20160718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0031514\tPMID:18094047\tIDA\t\tC\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0035735\tPMID:18094047\tIMP\t\tP\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0036064\tPMID:18094047\tIDA\t\tC\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:LmxM.19.0320\tC\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20160718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0042073\tGO_REF:0000012\tISA\tUniProtKB:Q944U2_CHLRE\tP\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0044782\tPMID:18094047\tIDA\t\tP\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14990\tIFT80\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tintraflagellar transport protein 80\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14990\tIFT80\t\tGO:0035735\tPMID:18094047\tIMP\t\tP\tintraflagellar transport protein 80\t\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1500\tMetRS\t\tGO:0004825\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00398\tF\tmethionyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1500\tMetRS\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR002304\tF\tmethionyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1500\tMetRS\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmethionyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1500\tMetRS\t\tGO:0006431\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00398\tP\tmethionyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1500\tMetRS\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tmethionyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15010\tTb927.10.15010\t\tGO:0005506\tGO_REF:0000011\tISM\tInterPro:IPR007197\tF\tlipoic acid synthetase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15010\tTb927.10.15010\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tlipoic acid synthetase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15010\tTb927.10.15010\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tlipoic acid synthetase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15010\tTb927.10.15010\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tlipoic acid synthetase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15010\tTb927.10.15010\t\tGO:0009107\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00510\tP\tlipoic acid synthetase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15010\tTb927.10.15010\t\tGO:0016992\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00510\tF\tlipoic acid synthetase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20131007\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15010\tTb927.10.15010\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tlipoic acid synthetase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15020\tDYRK\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tCMGC/DYRK protein kinase, putative\tYAK\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15020\tDYRK\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCMGC/DYRK protein kinase, putative\tYAK\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15020\tDYRK\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCMGC/DYRK protein kinase, putative\tYAK\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15020\tDYRK\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/DYRK protein kinase, putative\tYAK\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15020\tDYRK\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tCMGC/DYRK protein kinase, putative\tYAK\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15020\tDYRK\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCMGC/DYRK protein kinase, putative\tYAK\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15020\tDYRK\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tCMGC/DYRK protein kinase, putative\tYAK\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15020\tDYRK\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCMGC/DYRK protein kinase, putative\tYAK\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15040\tTb927.10.15040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15080\tWDR1\t\tGO:0005515\tPMID:26272611\tIPI\tGeneDB:Tb927.7.6310\tF\tWD40 Repeat 1\t\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15080\tWDR1\t\tGO:0031461\tPMID:26272611\tIPI\tGeneDB:Tb927.7.6310\tC\tWD40 Repeat 1\t\tmRNA\ttaxon:185431\t20170131\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15080\tWDR1\t\tGO:0036064\tPMID:28052114\tIDA\t\tC\tWD40 Repeat 1\t\tmRNA\ttaxon:185431\t20170131\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15090\tTb927.10.15090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1510\tNOT1\t\tGO:0010494\tPMID:26187993\tIDA\t\tC\tGeneral negative regulator of transcription subunit 1\tCNOT1\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15100\tTb927.10.15100\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15110\tTb927.10.15110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15120\tTb927.10.15120\t\tGO:0003735\tGO_REF:0000012\tISA\tUniProtKB:RS132_ARATH\tF\t40S ribosomal protein S13, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15120\tTb927.10.15120\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000589\tP\t40S ribosomal protein S13, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15120\tTb927.10.15120\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S13, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15130\tSEC22\t\tGO:0005484\tGO_REF:0000012\tISA\tUniProtKB:Q94AU2\tF\tVesicle-trafficking protein SEC22, putative\tSLY2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15130\tSEC22\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVesicle-trafficking protein SEC22, putative\tSLY2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15130\tSEC22\t\tGO:0006903\tGO_REF:0000012\tISA\tUniProtKB:Q94AU2\tP\tVesicle-trafficking protein SEC22, putative\tSLY2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15130\tSEC22\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:P22214\tC\tVesicle-trafficking protein SEC22, putative\tSLY2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15130\tSEC22\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tVesicle-trafficking protein SEC22, putative\tSLY2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15130\tSEC22\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tVesicle-trafficking protein SEC22, putative\tSLY2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15140\tTb927.10.15140\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15150\tRPC11\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001222\tF\tDNA-directed RNA polymerase III subunit C11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15150\tRPC11\t\tGO:0003700\tGO_REF:0000011\tISM\tInterPro:IPR001222\tF\tDNA-directed RNA polymerase III subunit C11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15150\tRPC11\t\tGO:0003899\tGO_REF:0000012\tISA\tUniProtKB:Q04307\tF\tDNA-directed RNA polymerase III subunit C11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15150\tRPC11\t\tGO:0006354\tGO_REF:0000011\tISM\tInterPro:IPR001222\tP\tDNA-directed RNA polymerase III subunit C11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15150\tRPC11\t\tGO:0006355\tGO_REF:0000011\tISM\tInterPro:IPR001222\tP\tDNA-directed RNA polymerase III subunit C11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15160\tTb927.10.15160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15170\tTb927.10.15170\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15170\tTb927.10.15170\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15170\tTb927.10.15170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15170\tTb927.10.15170\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15170\tTb927.10.15170\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15180\tTb927.10.15180\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR002164\tC\tnucleosome assembly protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15180\tTb927.10.15180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tnucleosome assembly protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15180\tTb927.10.15180\t\tGO:0005737\tPMID:29931198\tIDA\t\tC\tnucleosome assembly protein, putative\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15180\tTb927.10.15180\t\tGO:0006334\tGO_REF:0000011\tISM\tInterPro:IPR002164\tP\tnucleosome assembly protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15180\tTb927.10.15180\t\tGO:0042393\tGO_REF:0000011\tISM\tInterPro:IPR002164\tF\tnucleosome assembly protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15190\tBBP72\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15190\tBBP72\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1520\tRAB21\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tras-related protein Rab21, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1520\tRAB21\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tras-related protein Rab21, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15200\tTb927.10.15200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPredicted coiled-coil domain-containing protein (DUF2360), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15200\tTb927.10.15200\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tPredicted coiled-coil domain-containing protein (DUF2360), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15200\tTb927.10.15200\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tPredicted coiled-coil domain-containing protein (DUF2360), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15210\tCBP30\t\tGO:0005634\tPMID:15743819\tIDA\t\tC\tnuclear cap binding complex subunit CBP30\t\tmRNA\ttaxon:185431\t20100917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15210\tCBP30\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tnuclear cap binding complex subunit CBP30\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15210\tCBP30\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tnuclear cap binding complex subunit CBP30\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15210\tCBP30\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tnuclear cap binding complex subunit CBP30\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15210\tCBP30\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tnuclear cap binding complex subunit CBP30\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15210\tCBP30\t\tGO:0005846\tPMID:15743819\tIDA\t\tC\tnuclear cap binding complex subunit CBP30\t\tmRNA\ttaxon:185431\t20100917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15220\tTb927.10.15220\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15220\tTb927.10.15220\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15220\tTb927.10.15220\t\tGO:0005783\tPMID:20660476\tISS\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20100916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15220\tTb927.10.15220\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15240\tTb927.10.15240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15250\tPFC15\t\tGO:0005739\tPMID:20660476\tIDA\t\tC\tparaflagellar rod component, putative\t\tmRNA\ttaxon:185431\t20100923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15250\tPFC15\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tparaflagellar rod component, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15250\tPFC15\t\tGO:0005739\tPMID:19105172\tIDA\t\tC\tparaflagellar rod component, putative\t\tmRNA\ttaxon:185431\t20160627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15250\tPFC15\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tparaflagellar rod component, putative\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15260\tLRRC56\t\tGO:0060170\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15270\tTb927.10.15270\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tmetallo- peptidase, Clan MG, Family M24\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15270\tTb927.10.15270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmetallo- peptidase, Clan MG, Family M24\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15300\tTb927.10.15300\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tCalcium/calmodulin-dependent protein kinase kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15300\tTb927.10.15300\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCalcium/calmodulin-dependent protein kinase kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15300\tTb927.10.15300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCalcium/calmodulin-dependent protein kinase kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15300\tTb927.10.15300\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCalcium/calmodulin-dependent protein kinase kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15310\tTb927.10.15310\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15310\tTb927.10.15310\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15310\tTb927.10.15310\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15310\tTb927.10.15310\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15320\tTb927.10.15320\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15320\tTb927.10.15320\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15320\tTb927.10.15320\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15340\tTb927.10.15340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15340\tTb927.10.15340\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15340\tTb927.10.15340\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15350\tH3V\t\tGO:0000781\tPMID:15522895\tIDA\t\tC\thistone H3 variant V\t\tmRNA\ttaxon:185431\t20100324\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15350\tH3V\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000164\tF\thistone H3 variant V\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15350\tH3V\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000164\tC\thistone H3 variant V\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15350\tH3V\t\tGO:0006369\tPMID:19369410\tIDA\t\tP\thistone H3 variant V\t\tmRNA\ttaxon:185431\t20100331\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15350\tH3V\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000164\tP\thistone H3 variant V\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15360\tTb927.10.15360\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15360\tTb927.10.15360\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15370\tRPC40\t\tGO:0003899\tGO_REF:0000011\tISM\tPfam:PF01193\tF\tDNA-directed RNA polymerases I and III subunit RPAC1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15370\tRPC40\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerases I and III subunit RPAC1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15370\tRPC40\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerases I and III subunit RPAC1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15370\tRPC40\t\tGO:0006351\tGO_REF:0000011\tISM\tPfam:PF01193\tP\tDNA-directed RNA polymerases I and III subunit RPAC1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15380\tTb927.10.15380\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tU3 snoRNA-associated protein UTP11, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15380\tTb927.10.15380\t\tGO:0006364\tGO_REF:0000011\tISM\tInterPro:IPR007144\tP\tU3 snoRNA-associated protein UTP11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15380\tTb927.10.15380\t\tGO:0030529\tGO_REF:0000011\tISM\tInterPro:IPR007144\tC\tU3 snoRNA-associated protein UTP11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15390\tFAZ7\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15390\tFAZ7\t\tGO:0005515\tPMID:25736289\tIPI\tGeneDB:Tb927.4.3740\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15390\tFAZ7\t\tGO:0005856\tPMID:25736289\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15390\tFAZ7\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15390\tFAZ7\t\tGO:0120119\tPMID:25736289\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0003729\tPMID:30273340\tIDA\t\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20190110\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0005515\tPMID:30273340\tIPI\tGeneDB:Tb927.8.3820\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20190110\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0006402\tPMID:30273340\tIDA\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20190110\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0009267\tPMID:30273340\tIMP\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20200414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0010494\tPMID:30273340\tIPI\tGeneDB:Tb927.8.3820\tC\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20190110\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0034605\tPMID:30273340\tIMP\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20200414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0071361\tPMID:30273340\tIMP\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20200414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:0072721\tPMID:30273340\tIMP\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20200414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1540\tZC3H30\t\tGO:1903936\tPMID:30273340\tIMP\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20200414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15400\tTb927.10.15400\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15400\tTb927.10.15400\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15400\tTb927.10.15400\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15400\tTb927.10.15400\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tkinesin, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15400\tTb927.10.15400\t\tGO:0051286\tPMID:29931198\tIDA\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0005515\tPMID:30993866\tIPI\tGeneDB:Tb927.10.2370\tF\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01772\tP\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0016491\tGO_REF:0000011\tISM\tInterPro:IPR001236\tF\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0016491\tPMID:16321390\tIDA\t\tF\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0016615\tPMID:16321390\tIDA\t\tF\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0016615\tGO_REF:0000012\tISA\tUniProtKB:Q9ZP06\tF\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0020015\tPMID:16321390\tIDA\t\tC\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15430\tTb927.10.15430\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tAnkyrin repeats (3 copies), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15430\tTb927.10.15430\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tAnkyrin repeats (3 copies), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15430\tTb927.10.15430\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tAnkyrin repeats (3 copies), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15440\tTb927.10.15440\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15460\tVPS36\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVacuolar protein sorting associated protein 36, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15470\tTb927.10.15470\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15480\tTb927.10.15480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttransporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15480\tTb927.10.15480\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\ttransporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15480\tTb927.10.15480\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\ttransporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15490\tGMD\t\tGO:0000271\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01472\tP\tGDP-mannose 4,6 dehydratase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15490\tGMD\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGDP-mannose 4,6 dehydratase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15490\tGMD\t\tGO:0008446\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01472\tF\tGDP-mannose 4,6 dehydratase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15490\tGMD\t\tGO:0008446\tPMID:17640865\tIDA\t\tF\tGDP-mannose 4,6 dehydratase\t\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15490\tGMD\t\tGO:0020015\tPMID:17640865\tIDA\t\tC\tGDP-mannose 4,6 dehydratase\t\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15490\tGMD\t\tGO:0042351\tPMID:17640865\tIDA\t\tP\tGDP-mannose 4,6 dehydratase\t\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1550\tRPN5\t\tGO:0004175\tPMID:11854272\tIGI\tUniProtKB:RPN5_YEAST\tF\tproteasome regulatory non-ATP-ase subunit 5\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1550\tRPN5\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1550\tRPN5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1550\tRPN5\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 5\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1550\tRPN5\t\tGO:0006511\tPMID:11854272\tIMP\t\tP\tproteasome regulatory non-ATP-ase subunit 5\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15500\tTb927.10.15500\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSNARE protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15500\tTb927.10.15500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSNARE protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15500\tTb927.10.15500\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tSNARE protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15500\tTb927.10.15500\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSNARE protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15510\tTb927.10.15510\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15510\tTb927.10.15510\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15520\tTb927.10.15520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsignal recognition particle protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0000056\tGO_REF:0000002\tISS\t\tP\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20120807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003439\tF\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0009898\tGO_REF:0000011\tISM\tPfam:PF00005\tC\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0042624\tGO_REF:0000002\tISS\t\tF\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20120807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0090069\tPMID:16260602\tISS\t\tP\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20120807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15580\tTb927.10.15580\t\tGO:0003777\tGO_REF:0000011\tISM\tInterPro:IPR001372\tF\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15580\tTb927.10.15580\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001372\tC\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15580\tTb927.10.15580\t\tGO:0007017\tGO_REF:0000011\tISM\tInterPro:IPR001372\tP\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15590\tMIP\t\tGO:0003755\tGO_REF:0000012\tISA\tUniProtKB:F6X9I3_MOUSE\tF\tmacrophage infectivity potentiator, precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15590\tMIP\t\tGO:0005528\tGO_REF:0000012\tISA\tUniProtKB:F6X9I3_MOUSE\tF\tmacrophage infectivity potentiator, precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15590\tMIP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmacrophage infectivity potentiator, precursor, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15590\tMIP\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001179\tP\tmacrophage infectivity potentiator, precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1560\tNOP91\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleolar protein 91\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1560\tNOP91\t\tGO:0005730\tPMID:29931198\tIDA\t\tC\tNucleolar protein 91\t\tmRNA\ttaxon:185431\t20180625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1560\tNOP91\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNucleolar protein 91\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1560\tNOP91\t\tGO:0005819\tPMID:29931198\tIDA\t\tC\tNucleolar protein 91\t\tmRNA\ttaxon:185431\t20190111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15600\tTb927.10.15600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFKBP-type peptidylprolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15600\tTb927.10.15600\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001179\tP\tFKBP-type peptidylprolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15610\tTb927.10.15610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15610\tTb927.10.15610\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR000306\tF\tzinc finger protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15640\tTb927.10.15640\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15650\tmt-SAF11\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 11\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15650\tmt-SAF11\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitoribosomal SSU assembly factor 11\t\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15650\tmt-SAF11\t\tGO:0006400\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00071\tP\tMitoribosomal SSU assembly factor 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15650\tmt-SAF11\t\tGO:0009982\tGO_REF:0000002\tISS\t\tF\tMitoribosomal SSU assembly factor 11\t\tmRNA\ttaxon:185431\t20100721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15680\tTb927.10.15680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15690\tDOC1\t\tGO:0005680\tGO_REF:0000002\tISS\t\tC\tanaphase promoting complex, subunit 10-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15690\tDOC1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tanaphase promoting complex, subunit 10-like protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15690\tDOC1\t\tGO:0030234\tGO_REF:0000002\tISS\t\tF\tanaphase promoting complex, subunit 10-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15690\tDOC1\t\tGO:0051726\tGO_REF:0000002\tISS\t\tP\tanaphase promoting complex, subunit 10-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0000276\tPMID:19436713\tIDA\t\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0005515\tPMID:32184243\tIPI\tGeneDB:Tb927.11.1350\tF\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20200625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0005739\tPMID:32184243\tIPI\tGeneDB:Tb927.11.1350\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20200625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0005753\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0015992\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tP\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0046961\tGO_REF:0000011\tISM\tInterPro:IPR002379\tF\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15710\tMCP7\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15710\tMCP7\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15710\tMCP7\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15710\tMCP7\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20110718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15710\tMCP7\t\tGO:0005743\tGO_REF:0000011\tISM\tInterPro:IPR002067\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15710\tMCP7\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15720\tRPN9\t\tGO:0004175\tPMID:11854272\tIGI\tUniProtKB:RPN9_YEAST\tF\tproteasome regulatory non-ATP-ase subunit 9\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15720\tRPN9\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 9\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15720\tRPN9\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 9\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15720\tRPN9\t\tGO:0006511\tPMID:11854272\tIMP\t\tP\tproteasome regulatory non-ATP-ase subunit 9\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15730\tTb927.10.15730\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSPRY domain/Ankyrin repeats (3 copies), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15730\tTb927.10.15730\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tSPRY domain/Ankyrin repeats (3 copies), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15740\tTb927.10.15740\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15740\tTb927.10.15740\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0000002\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20180824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0008104\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20180824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0033955\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20180824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0036064\tPMID:20300570\tIDA\t\tC\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20150310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0120121\tPMID:30550896\tHDA\t\tC\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15760\tCAP36\t\tGO:0000281\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 36 kDa\t\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15760\tCAP36\t\tGO:0005856\tPMID:35447115\tIDA\t\tC\tCytoskeleton-associated protein 36 kDa\t\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15760\tCAP36\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tCytoskeleton-associated protein 36 kDa\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15760\tCAP36\t\tGO:1990386\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 36 kDa\t\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15770\tTZP51\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15770\tTZP51\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15780\tTb927.10.15780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15790\tCOX19\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcytochrome c oxidase assembly protein COX19, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15790\tCOX19\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcytochrome c oxidase assembly protein COX19, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1580\tMIC10-1\t\tGO:0061617\tPMID:30415698\tIDA\t\tC\tMICOS complex subunit MIC10-1\t\tmRNA\ttaxon:185431\t20181204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15800\tTb927.10.15800\t\tGO:0005200\tGO_REF:0000011\tISM\tInterPro:IPR004000\tF\tactin related protein 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15800\tTb927.10.15800\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tactin related protein 2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15800\tTb927.10.15800\t\tGO:0007010\tGO_REF:0000024\tISS\tGeneDB:PF14_0124\tP\tactin related protein 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15800\tTb927.10.15800\t\tGO:0015629\tGO_REF:0000011\tISM\tInterPro:IPR004000\tC\tactin related protein 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15810\tTb927.10.15810\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tFcf1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15830\tTb927.10.15830\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15840\tTb927.10.15840\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15840\tTb927.10.15840\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15840\tTb927.10.15840\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15850\tPEX12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tperoxin 12\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15850\tPEX12\t\tGO:0016021\tPMID:17188680\tIDA\t\tC\tperoxin 12\t\tmRNA\ttaxon:185431\t20110510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15850\tPEX12\t\tGO:0020015\tPMID:17188680\tIDA\t\tC\tperoxin 12\t\tmRNA\ttaxon:185431\t20110510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15850\tPEX12\t\tGO:0046860\tPMID:17188680\tIDA\t\tC\tperoxin 12\t\tmRNA\ttaxon:185431\t20110510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15860\tmt-LAF7\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal LSU assembly factor 7\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15870\tTb927.10.15870\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR000061\tF\tRNA binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15870\tTb927.10.15870\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA binding protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15870\tTb927.10.15870\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15870\tTb927.10.15870\t\tGO:0006396\tGO_REF:0000011\tISM\tInterPro:IPR000061\tP\tRNA binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15880\tTb927.10.15880\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15880\tTb927.10.15880\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15880\tTb927.10.15880\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15890\tTb927.10.15890\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1590\tTb927.10.1590\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000509\tF\tribosomal protein L36, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1590\tTb927.10.1590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tribosomal protein L36, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1590\tTb927.10.1590\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000509\tC\tribosomal protein L36, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1590\tTb927.10.1590\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000509\tP\tribosomal protein L36, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1590\tTb927.10.1590\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tribosomal protein L36, putative\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15900\tTb927.10.15900\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15910\tGUP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGlycerol uptake protein 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15910\tGUP1\t\tGO:0006506\tPMID:18036137\tIDA\t\tP\tGlycerol uptake protein 1\t\tmRNA\ttaxon:185431\t20170720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15910\tGUP1\t\tGO:0008374\tPMID:18036137\tIDA\t\tF\tGlycerol uptake protein 1\t\tmRNA\ttaxon:185431\t20170720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15910\tGUP1\t\tGO:0019563\tPMID:18036137\tIDA\t\tP\tGlycerol uptake protein 1\t\tmRNA\ttaxon:185431\t20170720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15930\tTb927.10.15930\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\tpdz domain containing protein, putative\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15940\tTb927.10.15940\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcation transporter, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15940\tTb927.10.15940\t\tGO:0006812\tGO_REF:0000011\tISM\tPfam:PF01545\tP\tcation transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15940\tTb927.10.15940\t\tGO:0008324\tGO_REF:0000011\tISM\tPfam:PF01545\tF\tcation transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15940\tTb927.10.15940\t\tGO:0016020\tPMID:11152613\tISM\t\tC\tcation transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15950\tTBP\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tTATA-box-binding protein\tTRF4\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15950\tTBP\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tTATA-box-binding protein\tTRF4\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15950\tTBP\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTATA-box-binding protein\tTRF4\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15950\tTBP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTATA-box-binding protein\tTRF4\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15950\tTBP\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tTATA-box-binding protein\tTRF4\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15960\tTb927.10.15960\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15970\tTb927.10.15970\t\tGO:0004806\tGO_REF:0000011\tISM\tInterPro:IPR002921\tF\tTriglyceride lipase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15970\tTb927.10.15970\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTriglyceride lipase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15970\tTb927.10.15970\t\tGO:0006629\tGO_REF:0000011\tISM\tInterPro:IPR002921\tP\tTriglyceride lipase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15980\tTb927.10.15980\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15980\tTb927.10.15980\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.160\tKPAP2\t\tGO:0004652\tPMID:17543398\tEXP\t\tF\tKinetoplast poly(A) polymerase 2\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.160\tKPAP2\t\tGO:0005739\tPMID:17543398\tEXP\t\tC\tKinetoplast poly(A) polymerase 2\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.160\tKPAP2\t\tGO:0006378\tPMID:17543398\tEXP\t\tP\tKinetoplast poly(A) polymerase 2\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16000\tTb927.10.16000\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\texpression site-associated gene 4 (ESAG4) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16000\tTb927.10.16000\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\texpression site-associated gene 4 (ESAG4) protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16000\tTb927.10.16000\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\texpression site-associated gene 4 (ESAG4) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16010\tTb927.10.16010\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16030\tMAPK2\t\tGO:0004672\tGO_REF:0000024\tISO\tGeneDB:LmxM.19.1440\tF\tmitogen activated protein kinase 2, putative\t\tmRNA\ttaxon:185431\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16030\tMAPK2\t\tGO:0006468\tGO_REF:0000024\tISO\tGeneDB:LmxM.19.1440\tP\tmitogen activated protein kinase 2, putative\t\tmRNA\ttaxon:185431\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16040\tTb927.10.16040\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\toxidoreductase-protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16060\tTb927.10.16060\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0000339\tPMID:15388875\tIDA\t\tF\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20101102\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0003723\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0003743\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0005515\tPMID:29288414\tIPI\tGeneDB:Tb927.3.870\tF\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0005737\tPMID:29288414\tIDA\t\tC\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:IPR001040\tC\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0006413\tPMID:15694484\tISA\t\tP\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0010494\tPMID:23382864\tIDA\t\tC\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16080\tTb927.10.16080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16080\tTb927.10.16080\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16090\tmt-SAF39\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial IF-3-like assembly factor, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16090\tmt-SAF39\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitochondrial IF-3-like assembly factor, putative\t\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1610\tTb927.10.1610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16100\tTb927.10.16100\t\tGO:0003755\tGO_REF:0000002\tISS\t\tF\tFK506-binding protein (FKBP)-type peptidyl-prolyl isomerase, putative\t\tmRNA\ttaxon:185431\t20120823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16100\tTb927.10.16100\t\tGO:0009408\tPMID:23592996\tIEP\t\tP\tFK506-binding protein (FKBP)-type peptidyl-prolyl isomerase, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16100\tTb927.10.16100\t\tGO:0031072\tGO_REF:0000002\tISS\t\tF\tFK506-binding protein (FKBP)-type peptidyl-prolyl isomerase, putative\t\tmRNA\ttaxon:185431\t20120823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16110\tCMF1\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tcomponent of motile flagella 1\t\tmRNA\ttaxon:185431\t20090428\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16120\tIMPDH1\t\tGO:0003938\tPMID:7961861\tIDA\t\tF\tinosine-5'-monophosphate dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16120\tIMPDH1\t\tGO:0009152\tPMID:24336212\tTAS\t\tP\tinosine-5'-monophosphate dehydrogenase\t\tmRNA\ttaxon:185431\t20140704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16120\tIMPDH1\t\tGO:0009152\tPMID:7961861\tTAS\t\tP\tinosine-5'-monophosphate dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16120\tIMPDH1\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tinosine-5'-monophosphate dehydrogenase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16120\tIMPDH1\t\tGO:0020015\tPMID:18242729\tIDA\t\tC\tinosine-5'-monophosphate dehydrogenase\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16140\tTb927.10.16140\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAdenylate/guanylate cyclase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16150\tFtsH16\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16150\tFtsH16\t\tGO:0005743\tPMID:32437726\tIDA\t\tC\tATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20220106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16150\tFtsH16\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR000642\tP\tATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16160\tTb927.10.16160\t\tGO:0004713\tGO_REF:0000011\tISM\tInterPro:IPR008266\tF\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16160\tTb927.10.16160\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16160\tTb927.10.16160\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16160\tTb927.10.16160\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16170\tmt-SAF24\t\tGO:0005249\tGO_REF:0000011\tISM\tInterPro:IPR003131\tF\tMitoribosomal SSU assembly factor 24\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16170\tmt-SAF24\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 24\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16170\tmt-SAF24\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tMitoribosomal SSU assembly factor 24\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16170\tmt-SAF24\t\tGO:0006813\tGO_REF:0000011\tISM\tInterPro:IPR003131\tP\tMitoribosomal SSU assembly factor 24\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16170\tmt-SAF24\t\tGO:0008076\tGO_REF:0000011\tISM\tInterPro:IPR003131\tC\tMitoribosomal SSU assembly factor 24\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16170\tmt-SAF24\t\tGO:0015272\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511301.140\tF\tMitoribosomal SSU assembly factor 24\t\tmRNA\ttaxon:185431\t20120823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16170\tmt-SAF24\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR003131\tC\tMitoribosomal SSU assembly factor 24\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16170\tmt-SAF24\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 24\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16180\tTb927.10.16180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0004016\tPMID:24879126\tIGI\tUniProtKB:CYAA_YEAST\tF\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20150604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0005929\tPMID:24879126\tIDA\t\tC\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20150604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0042803\tPMID:24879126\tIDA\t\tF\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20150604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1620\tTb927.10.1620\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphoserine/threonine/tyrosine-binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1620\tTb927.10.1620\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tphosphoserine/threonine/tyrosine-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1620\tTb927.10.1620\t\tGO:0008138\tGO_REF:0000011\tISM\tInterPro:IPR000340\tF\tphosphoserine/threonine/tyrosine-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16200\tTb927.10.16200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEndonuclease-reverse transcriptase/Reverse transcriptase (RNA-dependent DNA polymerase), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16200\tTb927.10.16200\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tEndonuclease-reverse transcriptase/Reverse transcriptase (RNA-dependent DNA polymerase), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16200\tTb927.10.16200\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tEndonuclease-reverse transcriptase/Reverse transcriptase (RNA-dependent DNA polymerase), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16210\tTb927.10.16210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved (pseudogene)\t\tpseudogenic_transcript\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1630\tABCE1\t\tGO:0000291\tPMID:14668021\tIDA\t\tP\tatp-binding cassette sub-family e member 1\tRL1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1630\tABCE1\t\tGO:0004540\tPMID:14668021\tIDA\t\tF\tatp-binding cassette sub-family e member 1\tRL1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1630\tABCE1\t\tGO:0005737\tPMID:14668021\tTAS\t\tC\tatp-binding cassette sub-family e member 1\tRL1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1630\tABCE1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tatp-binding cassette sub-family e member 1\tRL1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1630\tABCE1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tatp-binding cassette sub-family e member 1\tRL1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1650\tTb927.10.1650\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1650\tTb927.10.1650\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1660\tTb927.10.1660\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1660\tTb927.10.1660\t\tGO:0005739\tPMID:23650088\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20200409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1660\tTb927.10.1660\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1660\tTb927.10.1660\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1660\tTb927.10.1660\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0004407\tPMID:20624216\tIDA\t\tF\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0005634\tPMID:20624216\tIDA\t\tC\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0005829\tPMID:20624216\tIDA\t\tC\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0016575\tGO_REF:0000012\tISA\tUniProtKB:HDAC1_MOUSE\tP\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0031936\tPMID:20624216\tIMP\t\tP\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1690\tNBP35\t\tGO:0000166\tGO_REF:0000012\tISA\tUniProtKB:Q9R060\tF\tcytosolic Fe-S cluster assembly factor NBP35, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1690\tNBP35\t\tGO:0005829\tPMID:19875444\tEXP\t\tC\tcytosolic Fe-S cluster assembly factor NBP35, putative\t\tmRNA\ttaxon:185431\t20100604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.170\tCBF5\t\tGO:0000154\tPMID:16107339\tIMP\t\tP\tpseudouridine synthase, Cbf5p\t\tmRNA\ttaxon:185431\t20090508\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.170\tCBF5\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR002478\tF\tpseudouridine synthase, Cbf5p\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.170\tCBF5\t\tGO:0004730\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00431\tF\tpseudouridine synthase, Cbf5p\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.170\tCBF5\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpseudouridine synthase, Cbf5p\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.170\tCBF5\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:O14007\tC\tpseudouridine synthase, Cbf5p\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.170\tCBF5\t\tGO:0006400\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00431\tP\tpseudouridine synthase, Cbf5p\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1710\tTb927.10.1710\t\tGO:0003684\tGO_REF:0000011\tISM\tInterPro:IPR001126\tF\tDNA polymerase eta, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1710\tTb927.10.1710\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDNA polymerase eta, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1720\tTb927.10.1720\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1720\tTb927.10.1720\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1720\tTb927.10.1720\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1720\tTb927.10.1720\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1730\tPAMC3\t\tGO:0005739\tPMID:26991453\tIDA\t\tC\tPolyadenylation mediator complex protein PAMC3, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1730\tPAMC3\t\tGO:0006397\tPMID:25225332\tIC\tGO:0031019\tP\tPolyadenylation mediator complex protein PAMC3, putative\t\tmRNA\ttaxon:185431\t20160921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1730\tPAMC3\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tPolyadenylation mediator complex protein PAMC3, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1730\tPAMC3\t\tGO:0090615\tPMID:25225332\tIC\tGO:0031019\tP\tPolyadenylation mediator complex protein PAMC3, putative\t\tmRNA\ttaxon:185431\t20170227\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1740\tTb927.10.1740\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1740\tTb927.10.1740\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1750\tTb927.10.1750\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1770\tTb927.10.1770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1770\tTb927.10.1770\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1780\tTb927.10.1780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1780\tTb927.10.1780\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1780\tTb927.10.1780\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0015986\tGO_REF:0000011\tISM\tPfam:PF00231\tP\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0016469\tGO_REF:0000011\tISM\tPfam:PF00231\tC\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0046961\tGO_REF:0000011\tISM\tPfam:PF00231\tF\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1810\tRBX1\t\tGO:0006260\tPMID:28609481\tIMP\t\tP\tRING-H2 zinc finger, putative\t\tmRNA\ttaxon:185431\t20190814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1830\tTb927.10.1830\t\tGO:0016020\tGO_REF:0000012\tISA\tUniProtKB:Q94KK7\tC\tsyntaxin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1830\tTb927.10.1830\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:Q94KK7\tP\tsyntaxin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1840\tTb927.10.1840\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1850\tTb927.10.1850\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1850\tTb927.10.1850\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1860\tTb927.10.1860\t\tGO:0005634\tPMID:23650088\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20200409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1860\tTb927.10.1860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1860\tTb927.10.1860\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1870\tTb927.10.1870\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1870\tTb927.10.1870\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1870\tTb927.10.1870\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1870\tTb927.10.1870\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1870\tTb927.10.1870\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1870\tTb927.10.1870\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1870\tTb927.10.1870\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1880\tTb927.10.1880\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1890\tTb927.10.1890\t\tGO:0004198\tGO_REF:0000011\tISM\tInterPro:IPR001300\tF\tcysteine peptidase, Clan CA, family C2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1890\tTb927.10.1890\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tcysteine peptidase, Clan CA, family C2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1890\tTb927.10.1890\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001300\tP\tcysteine peptidase, Clan CA, family C2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.190\tTb927.10.190\t\tGO:0001558\tGO_REF:0000012\tISA\tUniProtKB:O44012\tP\t40S ribosomal protein S6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.190\tTb927.10.190\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S6, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.190\tTb927.10.190\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001377\tF\t40S ribosomal protein S6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.190\tTb927.10.190\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001377\tC\t40S ribosomal protein S6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.190\tTb927.10.190\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001377\tP\t40S ribosomal protein S6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.190\tTb927.10.190\t\tGO:0042127\tGO_REF:0000012\tISA\tUniProtKB:O44012\tP\t40S ribosomal protein S6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1900\tTb927.10.1900\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000380\tF\tDNA topoisomerase IA, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1900\tTb927.10.1900\t\tGO:0003917\tGO_REF:0000011\tISM\tInterPro:IPR000380\tF\tDNA topoisomerase IA, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1900\tTb927.10.1900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA topoisomerase IA, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1900\tTb927.10.1900\t\tGO:0006265\tGO_REF:0000011\tISM\tInterPro:IPR000380\tP\tDNA topoisomerase IA, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1900\tTb927.10.1900\t\tGO:0006304\tGO_REF:0000011\tISM\tInterPro:IPR006171\tP\tDNA topoisomerase IA, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1910\tTb927.10.1910\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1910\tTb927.10.1910\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1910\tTb927.10.1910\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1910\tTb927.10.1910\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1920\tTb927.10.1920\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1920\tTb927.10.1920\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1920\tTb927.10.1920\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1930\tTb927.10.1930\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1940\tTb927.10.1940\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCAMK/CAMKL pseudokinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1940\tTb927.10.1940\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL pseudokinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1940\tTb927.10.1940\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL pseudokinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1940\tTb927.10.1940\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL pseudokinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1950\tTb927.10.1950\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1950\tTb927.10.1950\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1960\tTb927.10.1960\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1970\tTb927.10.1970\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCHAT domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1990\tMVP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmajor vault protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.200\tTb927.10.200\t\tGO:0008553\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tF\tvacuolar ATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.200\tTb927.10.200\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tP\tvacuolar ATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.200\tTb927.10.200\t\tGO:0016471\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tC\tvacuolar ATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.200\tTb927.10.200\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tvacuolar ATP synthase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2000\tTb927.10.2000\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tactin-like protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2000\tTb927.10.2000\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tactin-like protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2000\tTb927.10.2000\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tactin-like protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2010\tHK1\t\tGO:0004396\tPMID:12144928\tIDA\t\tF\thexokinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2010\tHK1\t\tGO:0005975\tPMID:12144928\tTAS\t\tP\thexokinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2010\tHK1\t\tGO:0006096\tPMID:17028241\tIMP\t\tP\thexokinase\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2010\tHK1\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\thexokinase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2010\tHK1\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\thexokinase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2010\tHK1\t\tGO:0020015\tPMID:12144928\tTAS\t\tC\thexokinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2020\tHK2\t\tGO:0004396\tPMID:12144928\tIDA\t\tF\thexokinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2020\tHK2\t\tGO:0005929\tPMID:22619756\tIDA\t\tC\thexokinase\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2020\tHK2\t\tGO:0005975\tPMID:12144928\tTAS\t\tP\thexokinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2020\tHK2\t\tGO:0006096\tPMID:17028241\tIMP\t\tP\thexokinase\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2020\tHK2\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\thexokinase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2020\tHK2\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\thexokinase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2020\tHK2\t\tGO:0020015\tPMID:22619756\tIDA\t\tC\thexokinase\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2020\tHK2\t\tGO:0020015\tPMID:12144928\tTAS\t\tC\thexokinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2030\tTb927.10.2030\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPentatricopeptide repeat protein (PPR), putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2030\tTb927.10.2030\t\tGO:0005739\tPMID:17646387\tISM\t\tC\tPentatricopeptide repeat protein (PPR), putative\t\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2040\tTb927.10.2040\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2040\tTb927.10.2040\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2040\tTb927.10.2040\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2050\tTb927.10.2050\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2050\tTb927.10.2050\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2050\tTb927.10.2050\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2060\tTb927.10.2060\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2060\tTb927.10.2060\t\tGO:0005739\tPMID:15223320\tISM\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2070\tTb927.10.2070\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2080\tTb927.10.2080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2080\tTb927.10.2080\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2080\tTb927.10.2080\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2090\tEEF1A\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2090\tEEF1A\t\tGO:0003746\tGO_REF:0000012\tISA\tUniProtKB:EF1A2_MOUSE\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2090\tEEF1A\t\tGO:0005516\tPMID:8083206\tIDA\t\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2090\tEEF1A\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:P41166\tC\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2090\tEEF1A\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2090\tEEF1A\t\tGO:0007017\tPMID:8083206\tTAS\t\tP\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2090\tEEF1A\t\tGO:0019722\tPMID:8083206\tTAS\t\tP\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.210\tTbGAA1\t\tGO:0003923\tPMID:12958211\tIDA\t\tF\tGPI transamidase component GAA1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.210\tTbGAA1\t\tGO:0006506\tPMID:12958211\tTAS\t\tP\tGPI transamidase component GAA1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.210\tTbGAA1\t\tGO:0042765\tPMID:12958211\tIDA\t\tC\tGPI transamidase component GAA1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.210\tTbGAA1\t\tGO:0046658\tPMID:12582175\tISS\t\tC\tGPI transamidase component GAA1\t\tmRNA\ttaxon:185431\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2100\tEEF1A\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2100\tEEF1A\t\tGO:0003746\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00485\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2100\tEEF1A\t\tGO:0005516\tPMID:8083206\tIDA\t\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2100\tEEF1A\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:P41166\tC\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2100\tEEF1A\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2100\tEEF1A\t\tGO:0007017\tPMID:8061523\tTAS\t\tP\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2100\tEEF1A\t\tGO:0019722\tPMID:8083206\tTAS\t\tP\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2110\tEEF1A\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2110\tEEF1A\t\tGO:0005516\tGO_REF:0000012\tISA\tUniProtKB:P14963\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2110\tEEF1A\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2110\tEEF1A\t\tGO:0007017\tPMID:8061523\tTAS\t\tP\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2110\tEEF1A\t\tGO:0019722\tPMID:8083206\tTAS\t\tP\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0000395\tGO_REF:0000002\tISS\t\tP\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0000398\tPMID:19429779\tIPI\tGeneDB:Tb927.7.3120\tP\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0003729\tGO_REF:0000002\tISS\t\tF\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0005685\tGO_REF:0000002\tISS\t\tC\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0005829\tGO_REF:0000002\tISS\t\tC\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0008270\tGO_REF:0000002\tISS\t\tF\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2150\tMCUd\t\tGO:0005515\tPMID:32184243\tIPI\tGeneDB:Tb927.7.1470|GeneDB:Tb927.10.1570|GeneDB:Tb927.11.5280\tF\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20200626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2150\tMCUd\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2150\tMCUd\t\tGO:0005739\tPMID:30228243\tIDA\t\tC\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2150\tMCUd\t\tGO:0005739\tPMID:32184243\tIPI\tGeneDB:Tb927.7.1470|GeneDB:Tb927.10.1570|GeneDB:Tb927.11.5280\tC\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20200626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2150\tMCUd\t\tGO:0006816\tPMID:30228243\tIMP\t\tP\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2150\tMCUd\t\tGO:0015085\tPMID:30228243\tIMP\t\tF\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2150\tMCUd\t\tGO:1990246\tPMID:30228243\tIPI\t\tC\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2160\tTb927.10.2160\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2160\tTb927.10.2160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2170\tTb927.10.2170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2170\tTb927.10.2170\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2170\tTb927.10.2170\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2180\tTb927.10.2180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRtr1/RPAP2 family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2190\tTb927.10.2190\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tProtein of unknown function (DUF667), putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.220\tTb927.10.220\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF01780\tF\t60S ribosomal protein L37a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.220\tTb927.10.220\t\tGO:0005840\tGO_REF:0000011\tISM\tPfam:PF01780\tC\t60S ribosomal protein L37a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.220\tTb927.10.220\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF01780\tP\t60S ribosomal protein L37a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2200\tTb927.10.2200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2200\tTb927.10.2200\t\tGO:0042162\tPMID:29385523\tIDA\t\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2210\tTb927.10.2210\t\tGO:0004197\tGO_REF:0000011\tISM\tInterPro:IPR001394\tF\tPeptidase C19, ubiquitin carboxyl-terminal hydrolase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2210\tTb927.10.2210\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001394\tP\tPeptidase C19, ubiquitin carboxyl-terminal hydrolase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2220\tPWI1\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:LinJ.21.0470\tC\tPIWI-like protein\tPIWI\tmRNA\ttaxon:185431\t20151102\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0004324\tGO_REF:0000024\tISS\t\tF\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0005747\tPMID:21610103\tIDA\t\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20141016\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2230\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20141016\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20100715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2240\tTb927.10.2240\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tnuclear transport factor 2 (ntf2) domain- containing protein\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2240\tTb927.10.2240\t\tGO:0005515\tPMID:19450736\tIPI\tGeneDB:Tb927.7.1170\tF\tnuclear transport factor 2 (ntf2) domain- containing protein\t\tmRNA\ttaxon:185431\t20170511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2240\tTb927.10.2240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tnuclear transport factor 2 (ntf2) domain- containing protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2240\tTb927.10.2240\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tnuclear transport factor 2 (ntf2) domain- containing protein\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2250\tTb927.10.2250\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tubiquitin-conjugating enzyme variant Kua homologue, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2250\tTb927.10.2250\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tubiquitin-conjugating enzyme variant Kua homologue, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2260\tTb927.10.2260\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tUbiquitin family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2270\tTb927.10.2270\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q96QK1\tC\tvacuolar protein sorting-associated protein 35, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2270\tTb927.10.2270\t\tGO:0016020\tGO_REF:0000012\tISA\tUniProtKB:Q96QK1\tC\tvacuolar protein sorting-associated protein 35, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2280\tTb927.10.2280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2290\tJ3\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2290\tJ3\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2290\tJ3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2290\tJ3\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001305\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2290\tJ3\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2290\tJ3\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR001305\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2290\tJ3\t\tGO:0051087\tGO_REF:0000012\tISA\tUniProtKB:Q9QYJ0\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2290\tJ3\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.230\tTb927.10.230\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:Q9XZG5\tC\tproteasome subunit alpha type-5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.230\tTb927.10.230\t\tGO:0005829\tGO_REF:0000012\tISA\tUniProtKB:Q9XZG5\tC\tproteasome subunit alpha type-5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.230\tTb927.10.230\t\tGO:0005839\tPMID:11309374\tISS\t\tC\tproteasome subunit alpha type-5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.230\tTb927.10.230\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001353\tP\tproteasome subunit alpha type-5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2300\tTb927.10.2300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2300\tTb927.10.2300\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2310\tTb927.10.2310\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2320\tNUP41\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP41\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2320\tNUP41\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP41\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2320\tNUP41\t\tGO:0031080\tPMID:26891179\tIPI\tGeneDB:Tb927.11.2950\tC\tNucleoporin NUP41\t\tmRNA\ttaxon:185431\t20170215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2350\tTb927.10.2350\t\tGO:0004742\tGO_REF:0000012\tISA\tUniProtKB:P36413\tF\tpyruvate dehydrogenase complex E3 binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2350\tTb927.10.2350\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tpyruvate dehydrogenase complex E3 binding protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2350\tTb927.10.2350\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tpyruvate dehydrogenase complex E3 binding protein, putative\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2350\tTb927.10.2350\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tpyruvate dehydrogenase complex E3 binding protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2350\tTb927.10.2350\t\tGO:0006091\tGO_REF:0000012\tISA\tUniProtKB:P20285\tP\tpyruvate dehydrogenase complex E3 binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2350\tTb927.10.2350\t\tGO:0009374\tGO_REF:0000011\tISM\tInterPro:IPR000089\tF\tpyruvate dehydrogenase complex E3 binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2350\tTb927.10.2350\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tpyruvate dehydrogenase complex E3 binding protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2350\tTb927.10.2350\t\tGO:0045254\tGO_REF:0000012\tISA\tUniProtKB:P20285\tC\tpyruvate dehydrogenase complex E3 binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2360\tTb927.10.2360\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2360\tTb927.10.2360\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2360\tTb927.10.2360\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2370\tLA\t\tGO:0000481\tPMID:30993866\tIMP\t\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2370\tLA\t\tGO:0003723\tPMID:10899586\tIDA\t\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2370\tLA\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2370\tLA\t\tGO:0005515\tPMID:30993866\tIPI\tGeneDB:Tb927.3.3490\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2370\tLA\t\tGO:0005634\tPMID:30993866\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2370\tLA\t\tGO:0005654\tPMID:10671379\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2370\tLA\t\tGO:0005737\tPMID:30993866\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2370\tLA\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2370\tLA\t\tGO:0042254\tPMID:30993866\tIMP\t\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2390\tCK1.3\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tcasein kinase I, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2390\tCK1.3\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tcasein kinase I, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2390\tCK1.3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcasein kinase I, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.240\tPEX14\t\tGO:0006623\tPMID:12709066\tIDA\t\tP\tperoxin 14, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.240\tPEX14\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tperoxin 14, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.240\tPEX14\t\tGO:0020015\tPMID:18242729\tIDA\t\tC\tperoxin 14, putative\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.240\tPEX14\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tperoxin 14, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.240\tPEX14\t\tGO:0046860\tPMID:12709066\tIDA\t\tC\tperoxin 14, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2400\tTb927.10.2400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2410\tMSP-C\t\tGO:0004222\tGO_REF:0000011\tISM\tInterPro:IPR001577\tF\tMSP-C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2410\tMSP-C\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tMSP-C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2410\tMSP-C\t\tGO:0007155\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tMSP-C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2410\tMSP-C\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001577\tC\tMSP-C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2420\tTb927.10.2420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2430\tTb927.10.2430\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2430\tTb927.10.2430\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2430\tTb927.10.2430\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2440\tMCA4\tNOT\tGO:0004197\tPMID:21949125\tIDA\t\tF\tMetacaspase-4\t\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2440\tMCA4\t\tGO:0005634\tPMID:12062425\tIDA\t\tC\tMetacaspase-4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2440\tMCA4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMetacaspase-4\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2440\tMCA4\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001309\tP\tMetacaspase-4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2440\tMCA4\t\tGO:0008233\tPMID:12062425\tIGI\tUniProtKB:Q08601\tF\tMetacaspase-4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2440\tMCA4\t\tGO:0060170\tPMID:21949125\tIDA\t\tC\tMetacaspase-4\t\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2440\tMCA4\t\tGO:1903561\tPMID:21949125\tIDA\t\tC\tMetacaspase-4\t\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0000302\tGO_REF:0000002\tISO\tGeneDB:LmjF.34.0080\tP\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0004345\tPMID:10867008\tIDA\t\tF\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0005737\tPMID:10867008\tIDA\t\tC\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0006098\tPMID:10867008\tTAS\t\tP\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0008283\tGO_REF:0000002\tISO\tGeneDB:LmjF.34.0080\tP\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20140530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0009051\tGO_REF:0000002\tISO\tGeneDB:LmxM.33.0080\tP\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0020015\tPMID:10867008\tIDA\t\tC\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0042493\tGO_REF:0000002\tISO\tGeneDB:LmjF.34.0080\tP\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.250\tTb927.10.250\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.250\tTb927.10.250\t\tGO:0120260\tPMID:32518185\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20210115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2500\tTb927.10.2500\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2510\tTb927.10.2510\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2510\tTb927.10.2510\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2510\tTb927.10.2510\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0003887\tPMID:24267450\tIDA\t\tF\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\tNOT\tGO:0003896\tPMID:24267450\tIDA\t\tF\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0005634\tPMID:24267450\tIDA\t\tC\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0006979\tPMID:24267450\tIDA\t\tP\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0009411\tPMID:24267450\tIDA\t\tP\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0010389\tPMID:24267450\tIMP\t\tP\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0019985\tPMID:24267450\tIDA\t\tP\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0035861\tPMID:24267450\tIDA\t\tC\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0042162\tPMID:29385523\tIDA\t\tF\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\t\tGO:0070565\tPMID:29385523\tIPI\tGeneDB:Tb927.11.9870\tC\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2530\tADKF\t\tGO:0004017\tGO_REF:0000002\tISS\t\tF\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2530\tADKF\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2530\tADKF\t\tGO:0009152\tPMID:24336212\tTAS\t\tP\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20140704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2530\tADKF\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2530\tADKF\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2540\tADKC\t\tGO:0004017\tPMID:16567051\tISO\tGeneDB:TcCLB.506195.90\tF\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2540\tADKC\t\tGO:0005524\tPMID:16567051\tISO\tGeneDB:TcCLB.506195.90\tF\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2540\tADKC\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2540\tADKC\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2540\tADKC\t\tGO:0005829\tPMID:16567051\tISO\tGeneDB:TcCLB.506195.90\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2540\tADKC\t\tGO:0020015\tPMID:16567051\tISO\tGeneDB:TcCLB.506195.90\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2550\tTb927.10.2550\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmalate dehydrogenase-related\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2550\tTb927.10.2550\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmalate dehydrogenase-related\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0005739\tPMID:16321390\tIDA\t\tC\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0005739\tPMID:9603490\tIDA\t\tC\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01772\tP\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0016491\tPMID:16321390\tEXP\t\tF\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0016615\tPMID:16321390\tEXP\t\tF\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2570\tTb927.10.2570\t\tGO:0004559\tGO_REF:0000011\tISM\tInterPro:IPR000602\tF\tlysosomal alpha-mannosidase precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2570\tTb927.10.2570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tlysosomal alpha-mannosidase precursor, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2570\tTb927.10.2570\t\tGO:0005764\tPMID:9858640\tISA\tUniProtKB:AAD16005\tC\tlysosomal alpha-mannosidase precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2570\tTb927.10.2570\t\tGO:0005975\tGO_REF:0000011\tISM\tInterPro:IPR000602\tP\tlysosomal alpha-mannosidase precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2570\tTb927.10.2570\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tlysosomal alpha-mannosidase precursor, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2580\tTb927.10.2580\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleolar protein 12 (25kDa), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2580\tTb927.10.2580\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tNucleolar protein 12 (25kDa), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2590\tmt-SAF4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 4\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2590\tmt-SAF4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 4\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2600\tTb927.10.2600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2610\tTb927.10.2610\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF1935), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2620\tACDP23B\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCS domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2620\tACDP23B\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCS domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2620\tACDP23B\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCS domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2630\tTb927.10.2630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRegulator of Vps4 activity in the MVB pathway, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2640\tIFT81\t\tGO:0005929\tPMID:23990561\tIDA\t\tC\tintraflagellar transport protein 81\t\tmRNA\ttaxon:185431\t20150302\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2640\tIFT81\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tintraflagellar transport protein 81\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2640\tIFT81\t\tGO:0030992\tPMID:20923419\tIPI\tGeneDB:Tb927.3.3000\tC\tintraflagellar transport protein 81\t\tmRNA\ttaxon:185431\t20170206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2640\tIFT81\t\tGO:0035721\tPMID:23990561\tIMP\t\tP\tintraflagellar transport protein 81\t\tmRNA\ttaxon:185431\t20150302\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2660\tTb927.10.2660\t\tGO:0005819\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2660\tTb927.10.2660\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2660\tTb927.10.2660\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2660\tTb927.10.2660\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2660\tTb927.10.2660\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2680\tTb927.10.2680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpyridine nucleotide-disulphide oxidoreductase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2680\tTb927.10.2680\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tpyridine nucleotide-disulphide oxidoreductase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2690\tTb927.10.2690\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTrafficking protein Mon1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.270\tTb927.10.270\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001515\tF\t60S ribosomal protein L32, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.270\tTb927.10.270\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L32, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.270\tTb927.10.270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L32, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.270\tTb927.10.270\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001515\tC\t60S ribosomal protein L32, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2700\tTb927.10.2700\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpredicted WD40 repeat protein\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2710\tTb927.10.2710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tferredoxin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2710\tTb927.10.2710\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tferredoxin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2710\tTb927.10.2710\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tferredoxin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2720\tTb927.10.2720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2730\tTb927.10.2730\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSTART domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2730\tTb927.10.2730\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\tSTART domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2730\tTb927.10.2730\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tSTART domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2730\tTb927.10.2730\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSTART domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2750\tDHSc\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2750\tDHSc\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:LdBPK_340350.1\tC\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2750\tDHSc\t\tGO:0034038\tGO_REF:0000002\tISO\tGeneDB:LdBPK_340350.1\tF\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20091109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2750\tDHSc\t\tGO:0043687\tGO_REF:0000002\tISO\tGeneDB:LdBPK_340350.1\tP\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20091109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2760\tTb927.10.2760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATPase family associated with various cellular activities (AAA), putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2770\tTb927.10.2770\t\tGO:0003743\tGO_REF:0000024\tISS\t\tF\teukaryotic translation initiation factor 5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2770\tTb927.10.2770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\teukaryotic translation initiation factor 5, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2770\tTb927.10.2770\t\tGO:0006413\tGO_REF:0000024\tISS\t\tP\teukaryotic translation initiation factor 5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2780\tRPC1\t\tGO:0003899\tGO_REF:0000012\tISA\tUniProtKB:P08968\tF\tDNA-directed RNA polymerase III subunit C1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2780\tRPC1\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P08968\tC\tDNA-directed RNA polymerase III subunit C1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2780\tRPC1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA-directed RNA polymerase III subunit C1\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2780\tRPC1\t\tGO:0006351\tGO_REF:0000012\tISA\tUniProtKB:P08968\tP\tDNA-directed RNA polymerase III subunit C1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2790\tTb927.10.2790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tConserved oligomeric complex COG6, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2790\tTb927.10.2790\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tConserved oligomeric complex COG6, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2790\tTb927.10.2790\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tConserved oligomeric complex COG6, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.280\tCOXVI\t\tGO:0004129\tGO_REF:0000011\tISM\tInterPro:IPR003213\tF\tcytochrome oxidase subunit VI\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.280\tCOXVI\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcytochrome oxidase subunit VI\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.280\tCOXVI\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tcytochrome oxidase subunit VI\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.280\tCOXVI\t\tGO:0005739\tGO_REF:0000011\tISM\tInterPro:IPR003213\tC\tcytochrome oxidase subunit VI\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.280\tCOXVI\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcytochrome oxidase subunit VI\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.280\tCOXVI\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tcytochrome oxidase subunit VI\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2800\tMRPS6\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial ribosomal protein s6\tbS6m\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2800\tMRPS6\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tmitochondrial ribosomal protein s6\tbS6m\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2820\tTb927.10.2820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2830\tTb927.10.2830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2840\tTb927.10.2840\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR004977\tF\tribosomal protein S25, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2840\tTb927.10.2840\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR004977\tC\tribosomal protein S25, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2840\tTb927.10.2840\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR004977\tP\tribosomal protein S25, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2850\tTb927.10.2850\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2860\tPOC1\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tPOC1 centriolar protein homolog\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2860\tPOC1\t\tGO:0036064\tPMID:20300570\tIDA\t\tC\tPOC1 centriolar protein homolog\t\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2860\tPOC1\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tPOC1 centriolar protein homolog\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504105.130\tC\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20150421\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0005216\tGO_REF:0000011\tISM\tInterPro:IPR005821\tF\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0005929\tPMID:21685506\tIDA\t\tC\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20150420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0006811\tGO_REF:0000011\tISM\tInterPro:IPR005821\tP\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0044782\tPMID:21685506\tIMP\t\tP\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20150420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0120119\tPMID:21685506\tIDA\t\tC\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20190108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2880\tFAZ26\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tVoltage-dependent calcium channel subunit, putative\tFS179\tmRNA\ttaxon:185431\t20190108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2890\tTb927.10.2890\t\tGO:0000287\tPMID:12869196\tIDA\t\tF\tenolase\t\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2890\tTb927.10.2890\t\tGO:0004634\tPMID:12869196\tIDA\t\tF\tenolase\t\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2890\tTb927.10.2890\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tenolase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2890\tTb927.10.2890\t\tGO:0005829\tPMID:12869196\tIDA\t\tC\tenolase\t\tmRNA\ttaxon:185431\t20160628\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2890\tTb927.10.2890\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tenolase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.290\tTb927.10.290\t\tGO:0004175\tGO_REF:0000011\tISM\tInterPro:IPR001353\tF\tproteasome alpha 2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.290\tTb927.10.290\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome alpha 2 subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.290\tTb927.10.290\t\tGO:0005839\tGO_REF:0000012\tISA\tUniProtKB:PSA2A_ARATH\tC\tproteasome alpha 2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.290\tTb927.10.290\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001353\tP\tproteasome alpha 2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2900\tKAP95\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR001494\tC\timportin beta-1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2900\tKAP95\t\tGO:0005643\tGO_REF:0000011\tISM\tInterPro:IPR001494\tC\timportin beta-1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2900\tKAP95\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\timportin beta-1 subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2900\tKAP95\t\tGO:0008565\tGO_REF:0000024\tISS\t\tF\timportin beta-1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2900\tKAP95\t\tGO:0051170\tGO_REF:0000012\tISA\tUniProtKB:O13864\tP\timportin beta-1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2910\tTSR1IP\t\tGO:0000365\tPMID:24922194\tIMP\t\tP\tsplicing factor PTSR1 interacting protein\t\tmRNA\ttaxon:185431\t20190104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2910\tTSR1IP\t\tGO:0000398\tPMID:10477180\tIGI\t\tP\tsplicing factor PTSR1 interacting protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2910\tTSR1IP\t\tGO:0003723\tPMID:10477180\tIDA\t\tF\tsplicing factor PTSR1 interacting protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2910\tTSR1IP\t\tGO:0005634\tPMID:10477180\tIDA\t\tC\tsplicing factor PTSR1 interacting protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2910\tTSR1IP\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tsplicing factor PTSR1 interacting protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2910\tTSR1IP\t\tGO:0006364\tPMID:24922194\tIMP\t\tP\tsplicing factor PTSR1 interacting protein\t\tmRNA\ttaxon:185431\t20190104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2910\tTSR1IP\t\tGO:0016607\tPMID:24922194\tIDA\t\tC\tsplicing factor PTSR1 interacting protein\t\tmRNA\ttaxon:185431\t20190104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2910\tTSR1IP\t\tGO:0045292\tPMID:24922194\tIMP\t\tP\tsplicing factor PTSR1 interacting protein\t\tmRNA\ttaxon:185431\t20190104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2930\tTb927.10.2930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2930\tTb927.10.2930\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2940\tTb927.10.2940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSoluble NSF attachment protein, SNAP, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2960\tGUF1\t\tGO:0005525\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01393\tF\tTranslation factor GUF1, mitochondrial, putative\tLepA\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2960\tGUF1\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tTranslation factor GUF1, mitochondrial, putative\tLepA\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2960\tGUF1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tTranslation factor GUF1, mitochondrial, putative\tLepA\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2960\tGUF1\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tTranslation factor GUF1, mitochondrial, putative\tLepA\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2970\tIF1\t\tGO:0005739\tPMID:23650088\tIDA\t\tC\tInhibitor of F1-ATPase\t\tmRNA\ttaxon:185431\t20200409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2970\tIF1\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tInhibitor of F1-ATPase\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2970\tIF1\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tInhibitor of F1-ATPase\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2970\tIF1\t\tGO:0042030\tPMID:30288927\tIDA\t\tF\tInhibitor of F1-ATPase\t\tmRNA\ttaxon:185431\t20200511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2970\tIF1\t\tGO:0042030\tPMID:28414727\tIMP\t\tF\tInhibitor of F1-ATPase\t\tmRNA\ttaxon:185431\t20200511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2980\tRPN11\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2980\tRPN11\t\tGO:0006511\tPMID:12213827\tIMP\t\tP\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2980\tRPN11\t\tGO:0016049\tPMID:12213827\tIMP\t\tP\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2990\tCBP110\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tnuclear cap binding complex subunit CBP110\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2990\tCBP110\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tnuclear cap binding complex subunit CBP110\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2990\tCBP110\t\tGO:0005846\tPMID:15743819\tIDA\t\tC\tnuclear cap binding complex subunit CBP110\t\tmRNA\ttaxon:185431\t20100922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.300\tMCUb\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.300\tMCUb\t\tGO:0005739\tPMID:30228243\tIDA\t\tC\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.300\tMCUb\t\tGO:1990246\tPMID:30228243\tIPI\tGeneDB:Tb927.11.1350\tC\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3000\tOFD1\t\tGO:0036064\tPMID:30045883\tIDA\t\tC\tOrofaciodigital syndrome 1-like protein, putative\t\tmRNA\ttaxon:185431\t20180806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3000\tOFD1\t\tGO:0060271\tPMID:30045883\tIMP\t\tP\tOrofaciodigital syndrome 1-like protein, putative\t\tmRNA\ttaxon:185431\t20180806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3010\tTb927.10.3010\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3010\tTb927.10.3010\t\tGO:0120120\tPMID:23264645\tIDA\t\tC\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3030\tRPN11\t\tGO:0004175\tGO_REF:0000012\tISA\tUniProtKB:Q9W178\tF\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3030\tRPN11\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3030\tRPN11\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3030\tRPN11\t\tGO:0006511\tPMID:12213827\tIMP\t\tP\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3030\tRPN11\t\tGO:0016049\tPMID:12213827\tIMP\t\tP\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3040\tSDH9\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tsuccinate dehydrogenase subunit\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3040\tSDH9\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tsuccinate dehydrogenase subunit\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3040\tSDH9\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tsuccinate dehydrogenase subunit\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3050\tTb927.10.3050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3070\tTb927.10.3070\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3080\tTb927.10.3080\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tmethionine biosynthetic protein, putative\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3080\tTb927.10.3080\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tmethionine biosynthetic protein, putative\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.310\tPUF3\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR001313\tF\tpumillio/PUF RNA binding protein 3\tTb10.100.0190\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.310\tPUF3\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tpumillio/PUF RNA binding protein 3\tTb10.100.0190\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.310\tPUF3\t\tGO:0003729\tPMID:32513341\tIDA\t\tF\tpumillio/PUF RNA binding protein 3\tTb10.100.0190\tmRNA\ttaxon:185431\t20210721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.310\tPUF3\t\tGO:0005829\tPMID:32513341\tIDA\t\tC\tpumillio/PUF RNA binding protein 3\tTb10.100.0190\tmRNA\ttaxon:185431\t20210721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.310\tPUF3\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tpumillio/PUF RNA binding protein 3\tTb10.100.0190\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.310\tPUF3\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tpumillio/PUF RNA binding protein 3\tTb10.100.0190\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.310\tPUF3\t\tGO:0016071\tGO_REF:0000011\tISM\tInterPro:IPR001313\tP\tpumillio/PUF RNA binding protein 3\tTb10.100.0190\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3100\tTb927.10.3100\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglycerol-3-phosphate acyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3100\tTb927.10.3100\t\tGO:0008654\tGO_REF:0000002\tISO\tGeneDB:LmjF.03.0080\tP\tglycerol-3-phosphate acyltransferase, putative\t\tmRNA\ttaxon:185431\t20140120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3100\tTb927.10.3100\t\tGO:0043772\tGO_REF:0000002\tISO\tGeneDB:LmjF.03.0080\tF\tglycerol-3-phosphate acyltransferase, putative\t\tmRNA\ttaxon:185431\t20140120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3110\tpril\t\tGO:0003896\tGO_REF:0000011\tISM\tInterPro:IPR007238\tF\tDNA primase large subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3110\tpril\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA primase large subunit, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3110\tpril\t\tGO:0005658\tGO_REF:0000011\tISM\tInterPro:IPR007238\tC\tDNA primase large subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3110\tpril\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tDNA primase large subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3110\tpril\t\tGO:0006269\tGO_REF:0000011\tISM\tInterPro:IPR007238\tP\tDNA primase large subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3110\tpril\t\tGO:0044786\tPMID:24267450\tIMP\t\tP\tDNA primase large subunit, putative\t\tmRNA\ttaxon:185431\t20140305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3120\tCOX11\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcytochrome c oxidase assembly protein COX11, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3120\tCOX11\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tcytochrome c oxidase assembly protein COX11, putative\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3120\tCOX11\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcytochrome c oxidase assembly protein COX11, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3120\tCOX11\t\tGO:0009060\tGO_REF:0000012\tISA\tUniProtKB:P19516\tP\tcytochrome c oxidase assembly protein COX11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3140\tBBP68\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3140\tBBP68\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3140\tBBP68\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tBasal body protein\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3140\tBBP68\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3150\tTb927.10.3150\t\tGO:0008080\tGO_REF:0000011\tISM\tInterPro:IPR000182\tF\tN-acetyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3150\tTb927.10.3150\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00583\tP\tN-acetyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003439\tF\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0009898\tGO_REF:0000011\tISM\tPfam:PF00005\tC\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0042626\tGO_REF:0000011\tISM\tPfam:PF00005\tF\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3180\tTb927.10.3180\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tzinc-finger of acetyl-transferase ESCO, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0000375\tGO_REF:0000012\tISA\tUniProtKB:Q4CM27_TRYCC\tP\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0006397\tGO_REF:0000012\tISA\tUniProtKB:Q4CM27_TRYCC\tP\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0008380\tGO_REF:0000012\tISA\tUniProtKB:Q4CM27_TRYCC\tP\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0016607\tPMID:12706799\tTAS\t\tC\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3210\tTb927.10.3210\t\tGO:0003842\tGO_REF:0000012\tISA\tUniProtKB:P30038\tF\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3210\tTb927.10.3210\t\tGO:0004028\tGO_REF:0000011\tISM\tPfam:PF00171\tF\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3210\tTb927.10.3210\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3210\tTb927.10.3210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3210\tTb927.10.3210\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3210\tTb927.10.3210\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3210\tTb927.10.3210\t\tGO:0006562\tGO_REF:0000012\tISA\tUniProtKB:P30038\tP\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3220\tTb927.10.3220\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tnucleolus protein, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3230\tTb927.10.3230\t\tGO:0004713\tGO_REF:0000011\tISM\tInterPro:IPR008266\tF\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3230\tTb927.10.3230\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3230\tTb927.10.3230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3230\tTb927.10.3230\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3230\tTb927.10.3230\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3250\tmS59\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial SSU ribosomal protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3250\tmS59\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitochondrial SSU ribosomal protein, putative\t\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3260\tLACS5\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR000873\tF\tLong-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 5) (LACS 5), putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3260\tLACS5\t\tGO:0004467\tGO_REF:0000012\tISA\tUniProtKB:O95573\tF\tLong-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 5) (LACS 5), putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3260\tLACS5\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tLong-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 5) (LACS 5), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3260\tLACS5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLong-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 5) (LACS 5), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3260\tLACS5\t\tGO:0030497\tPMID:20382188\tISS\t\tP\tLong-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 5) (LACS 5), putative\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3260\tLACS5\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tLong-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 5) (LACS 5), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3270\tTb927.10.3270\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3280\tTb927.10.3280\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002675\tF\t60S ribosomal proteins L38, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3280\tTb927.10.3280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal proteins L38, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3280\tTb927.10.3280\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002675\tC\t60S ribosomal proteins L38, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3280\tTb927.10.3280\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002675\tP\t60S ribosomal proteins L38, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3280\tTb927.10.3280\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal proteins L38, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3280\tTb927.10.3280\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal proteins L38, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3300\tTb927.10.3300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4206), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3310\tCMF76b\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tComponent of motile flagella 76b\t\tmRNA\ttaxon:185431\t20090428\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3320\tTb927.10.3320\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3320\tTb927.10.3320\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3330\tTb927.10.3330\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tDDRGK domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3330\tTb927.10.3330\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tDDRGK domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3340\tTb927.10.3340\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3340\tTb927.10.3340\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3340\tTb927.10.3340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3340\tTb927.10.3340\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3350\tTb927.10.3350\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tmajor facilitator superfamily, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3360\tTb927.10.3360\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3360\tTb927.10.3360\t\tGO:0005829\tGO_REF:0000002\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20110105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3370\tTb927.10.3370\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001813\tF\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3370\tTb927.10.3370\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001813\tC\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3370\tTb927.10.3370\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3370\tTb927.10.3370\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001813\tC\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3370\tTb927.10.3370\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001813\tP\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3370\tTb927.10.3370\t\tGO:0006414\tGO_REF:0000011\tISM\tInterPro:IPR001859\tP\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3380\tTb927.10.3380\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001813\tF\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3380\tTb927.10.3380\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001813\tC\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3380\tTb927.10.3380\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3380\tTb927.10.3380\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001813\tC\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3380\tTb927.10.3380\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001813\tP\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3380\tTb927.10.3380\t\tGO:0006414\tGO_REF:0000011\tISM\tInterPro:IPR001859\tP\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3390\tTb927.10.3390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted TLD domain protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.340\tTb927.10.340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial structure specific endonuclease I (SSE-1), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.340\tTb927.10.340\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:Q9UA39_CRIFA\tC\tmitochondrial structure specific endonuclease I (SSE-1), putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.340\tTb927.10.340\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial structure specific endonuclease I (SSE-1), putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.340\tTb927.10.340\t\tGO:0006308\tGO_REF:0000011\tISM\tPfam:PF01367\tP\tmitochondrial structure specific endonuclease I (SSE-1), putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.340\tTb927.10.340\t\tGO:0008409\tGO_REF:0000011\tISM\tPfam:PF01367\tF\tmitochondrial structure specific endonuclease I (SSE-1), putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3400\tTb927.10.3400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3410\tTb927.10.3410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3420\tTb927.10.3420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADH-ubiquinone oxidoreductase c, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3430\tTb927.10.3430\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3430\tTb927.10.3430\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3430\tTb927.10.3430\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3470\tTb927.10.3470\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tAnkyrin repeats (3 copies), putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3480\tTb927.10.3480\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3490\tTb927.10.3490\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid-specific dual specificity phosphatase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.350\tBBP59\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tprotein kinase PK4, putative\tPK4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.350\tBBP59\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tprotein kinase PK4, putative\tPK4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.350\tBBP59\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprotein kinase PK4, putative\tPK4\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.350\tBBP59\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tprotein kinase PK4, putative\tPK4\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.350\tBBP59\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tprotein kinase PK4, putative\tPK4\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3500\tRBSR4\t\tGO:0000398\tPMID:19320097\tIMP\t\tP\tRNA-binding protein, putative\tU2AF65\tmRNA\ttaxon:185431\t20171123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3500\tRBSR4\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:P26368\tF\tRNA-binding protein, putative\tU2AF65\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3500\tRBSR4\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tRNA-binding protein, putative\tU2AF65\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3500\tRBSR4\t\tGO:0005515\tPMID:19320097\tIPI\tGeneDB:Tb927.10.9400\tF\tRNA-binding protein, putative\tU2AF65\tmRNA\ttaxon:185431\t20171123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3500\tRBSR4\t\tGO:0005634\tPMID:19320097\tIDA\t\tC\tRNA-binding protein, putative\tU2AF65\tmRNA\ttaxon:185431\t20171123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3500\tRBSR4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA-binding protein, putative\tU2AF65\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3500\tRBSR4\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tU2AF65\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3500\tRBSR4\t\tGO:0006396\tGO_REF:0000012\tISA\tUniProtKB:P26368\tP\tRNA-binding protein, putative\tU2AF65\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3500\tRBSR4\t\tGO:0045291\tPMID:19320097\tIMP\t\tP\tRNA-binding protein, putative\tU2AF65\tmRNA\ttaxon:185431\t20171123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3510\tTb927.10.3510\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\ttRNA pseudouridine synthase D (TruD), putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3510\tTb927.10.3510\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\ttRNA pseudouridine synthase D (TruD), putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3520\tRPT4\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tprotease regulatory ATPase subunit 4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3520\tRPT4\t\tGO:0006511\tPMID:11854272\tIMP\t\tP\tprotease regulatory ATPase subunit 4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3520\tRPT4\t\tGO:0016887\tPMID:11854272\tIGI\tUniProtKB:PRS10_YEAST\tF\tprotease regulatory ATPase subunit 4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3540\tRPA31\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA-directed RNA polymerase I subunit RPA31\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3540\tRPA31\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase I subunit RPA31\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3540\tRPA31\t\tGO:0005736\tPMID:17606628\tHDA\tGeneDB:Tb927.11.200\tC\tDNA-directed RNA polymerase I subunit RPA31\t\tmRNA\ttaxon:185431\t20200331\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3540\tRPA31\t\tGO:0006360\tPMID:17606628\tIMP\t\tP\tDNA-directed RNA polymerase I subunit RPA31\t\tmRNA\ttaxon:185431\t20200331\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3550\tTb927.10.3550\t\tGO:0003678\tGO_REF:0000011\tISM\tInterPro:IPR010614\tF\tDNA repair helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3550\tTb927.10.3550\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA repair helicase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3550\tTb927.10.3550\t\tGO:0006281\tGO_REF:0000012\tISA\tUniProtKB:P26659\tP\tDNA repair helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3560\tPRMT1-PRO\t\tGO:0003729\tPMID:30563898\tIDA\t\tF\tProtein arginine N-methyltransferase 1, prozyme\tPRMT3\tmRNA\ttaxon:185431\t20200412\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3560\tPRMT1-PRO\t\tGO:0005515\tPMID:27998975\tIPI\tGeneDB:Tb927.1.4690\tF\tProtein arginine N-methyltransferase 1, prozyme\tPRMT3\tmRNA\ttaxon:185431\t20200412\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3560\tPRMT1-PRO\t\tGO:0008469\tGO_REF:0000012\tISA\tUniProtKB:CARM1_DROME\tF\tProtein arginine N-methyltransferase 1, prozyme\tPRMT3\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3560\tPRMT1-PRO\t\tGO:0016571\tGO_REF:0000012\tISA\tUniProtKB:Q8K1Y5\tP\tProtein arginine N-methyltransferase 1, prozyme\tPRMT3\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3560\tPRMT1-PRO\t\tGO:0035097\tGO_REF:0000012\tISA\tUniProtKB:CARM1_DROME\tC\tProtein arginine N-methyltransferase 1, prozyme\tPRMT3\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3570\tKREX2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA editing exonuclease 2\tMP99|REX2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3570\tKREX2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tRNA editing exonuclease 2\tMP99|REX2\tmRNA\ttaxon:185431\t20140121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3570\tKREX2\t\tGO:0009451\tPMID:12649499\tTAS\t\tP\tRNA editing exonuclease 2\tMP99|REX2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3570\tKREX2\t\tGO:0031019\tPMID:20018860|PMID:12649499\tIDA\t\tC\tRNA editing exonuclease 2\tMP99|REX2\tmRNA\ttaxon:185431\t20140528\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3570\tKREX2\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tRNA editing exonuclease 2\tMP99|REX2\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3580\tmS58\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial SSU ribosomal protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3580\tmS58\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitochondrial SSU ribosomal protein, putative\t\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3590\tTb927.10.3590\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.360\tTb927.10.360\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.360\tTb927.10.360\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3600\tTb927.10.3600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3610\tTb927.10.3610\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3620\tTb927.10.3620\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLaminin-like protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3630\tTb927.10.3630\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3630\tTb927.10.3630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3640\tNP\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tnuclear transmembrane protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3640\tNP\t\tGO:0031965\tPMID:25503798\tIDA\t\tC\tnuclear transmembrane protein, putative\t\tmRNA\ttaxon:185431\t20150226\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3640\tNP\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tnuclear transmembrane protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3650\tFRDm1\t\tGO:0005739\tPMID:15718239\tIDA\t\tC\tNADH-dependent fumarate reductase\t\tmRNA\ttaxon:185431\t20160811\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3650\tFRDm1\t\tGO:0020015\tPMID:18242729\tIDA\t\tC\tNADH-dependent fumarate reductase\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3650\tFRDm1\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tNADH-dependent fumarate reductase\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3660\tcASAT\t\tGO:0004069\tGO_REF:0000012\tISA\tUniProtKB:P28011\tF\taspartate aminotransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3660\tcASAT\t\tGO:0005737\tPMID:11443076\tIDA\t\tC\taspartate aminotransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3660\tcASAT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\taspartate aminotransferase\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3660\tcASAT\t\tGO:0009058\tGO_REF:0000011\tISM\tInterPro:IPR004839\tP\taspartate aminotransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3660\tcASAT\t\tGO:0019509\tPMID:11443076\tIDA\t\tP\taspartate aminotransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3660\tcASAT\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\taspartate aminotransferase\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3670\tTb927.10.3670\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3670\tTb927.10.3670\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3670\tTb927.10.3670\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3690\tTb927.10.3690\t\tGO:0000154\tGO_REF:0000011\tISM\tInterPro:IPR001737\tP\trRNA dimethyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3690\tTb927.10.3690\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\trRNA dimethyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3690\tTb927.10.3690\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\trRNA dimethyltransferase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3690\tTb927.10.3690\t\tGO:0005739\tPMID:15223320\tISM\t\tC\trRNA dimethyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3690\tTb927.10.3690\t\tGO:0008649\tGO_REF:0000011\tISM\tInterPro:IPR001737\tF\trRNA dimethyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.370\tCNB\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tcalcineurin B subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.370\tCNB\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:LmjF.21.1630\tC\tcalcineurin B subunit, putative\t\tmRNA\ttaxon:185431\t20110615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.370\tCNB\t\tGO:0009408\tGO_REF:0000024\tISO\tGeneDB:LmjF.21.1630\tP\tcalcineurin B subunit, putative\t\tmRNA\ttaxon:185431\t20150311\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.370\tCNB\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tcalcineurin B subunit, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3700\tAMPKG\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAMP-activated protein kinase, gamma regulatory subunit\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3710\tPA26\t\tGO:0006508\tPMID:10567354\tTAS\t\tP\tproteasome activator protein PA26\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3710\tPA26\t\tGO:0008537\tPMID:10567354\tIDA\t\tC\tproteasome activator protein PA26\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3710\tPA26\t\tGO:0061136\tPMID:10567354\tIDA\t\tP\tproteasome activator protein PA26\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3720\tTb927.10.3720\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3720\tTb927.10.3720\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3720\tTb927.10.3720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3730\tSET6\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSET domain protein 6\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3730\tSET6\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 6\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3740\tTb927.10.3740\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3750\tTb927.10.3750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEndonuclease/Exonuclease/phosphatase family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0008553\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00309\tF\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00309\tP\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0016471\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00309\tC\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3770\tTb927.10.3770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted TPR repeat protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3770\tTb927.10.3770\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tpredicted TPR repeat protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3780\tTb927.10.3780\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3780\tTb927.10.3780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3780\tTb927.10.3780\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3780\tTb927.10.3780\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3790\tTb927.10.3790\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3790\tTb927.10.3790\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10830\tP\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0003723\tPMID:18951088\tIDA\t\tF\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0005739\tPMID:17646387\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10830\tC\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0043631\tPMID:18951088\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3800\tESB1\t\tGO:0000281\tPMID:35879525\tIMP\t\tP\tExpression site body (ESB)-specific protein 1\t\tmRNA\ttaxon:185431\t20220831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3800\tESB1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tExpression site body (ESB)-specific protein 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3800\tESB1\t\tGO:0006356\tPMID:35879525\tIMP\t\tP\tExpression site body (ESB)-specific protein 1\t\tmRNA\ttaxon:185431\t20220831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3800\tESB1\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR001841\tF\tExpression site body (ESB)-specific protein 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3810\tNUP65\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP65\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3810\tNUP65\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP65\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3810\tNUP65\t\tGO:0044611\tPMID:26891179\tIPI\tGeneDB:Tb927.4.2880\tC\tNucleoporin NUP65\t\tmRNA\ttaxon:185431\t20170215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3830\tTb927.10.3830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3830\tTb927.10.3830\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3830\tTb927.10.3830\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3840\tTb927.10.3840\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t60S ribosomal protein L18a, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3840\tTb927.10.3840\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002670\tF\t60S ribosomal protein L18a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3840\tTb927.10.3840\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L18a, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3840\tTb927.10.3840\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L18a, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3840\tTb927.10.3840\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002670\tC\t60S ribosomal protein L18a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3840\tTb927.10.3840\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002670\tP\t60S ribosomal protein L18a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3850\tTb927.10.3850\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3860\tTb927.10.3860\t\tGO:0016192\tGO_REF:0000011\tISM\tInterPro:IPR005024\tP\tSNF-7-like protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3880\tTb927.10.3880\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3890\tPIP5KII-alpha\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tphosphatidylinositol-4-phosphate 5-kinase, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3890\tPIP5KII-alpha\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tphosphatidylinositol-4-phosphate 5-kinase, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.390\tTb927.10.390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDUF2407 ubiquitin-like domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3900\tTb927.10.3900\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3900\tTb927.10.3900\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3900\tTb927.10.3900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3900\tTb927.10.3900\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3900\tTb927.10.3900\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3910\tTb927.10.3910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3930\tTb927.10.3930\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3930\tTb927.10.3930\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001593\tF\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3930\tTb927.10.3930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3930\tTb927.10.3930\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001593\tC\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3930\tTb927.10.3930\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001593\tP\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3930\tTb927.10.3930\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3940\tTb927.10.3940\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3940\tTb927.10.3940\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001593\tF\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3940\tTb927.10.3940\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3940\tTb927.10.3940\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001593\tC\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3940\tTb927.10.3940\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001593\tP\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3950\tTb927.10.3950\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3950\tTb927.10.3950\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3960\tTb927.10.3960\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3960\tTb927.10.3960\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3970\tTb927.10.3970\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3990\tDHH1\t\tGO:0000932\tPMID:17635187\tIDA\t\tC\tDHH1\t\tmRNA\ttaxon:185431\t20171006\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3990\tDHH1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tDHH1\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3990\tDHH1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDHH1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3990\tDHH1\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tDHH1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3990\tDHH1\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDHH1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.40\tTb927.10.40\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.40\tTb927.10.40\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.40\tTb927.10.40\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.400\tTb927.10.400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.400\tTb927.10.400\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.400\tTb927.10.400\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4000\tTb927.10.4000\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR001753\tF\tmethylglutaconyl-CoA hydratase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4000\tTb927.10.4000\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tmethylglutaconyl-CoA hydratase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4000\tTb927.10.4000\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmethylglutaconyl-CoA hydratase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4000\tTb927.10.4000\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001753\tP\tmethylglutaconyl-CoA hydratase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4020\tTb927.10.4020\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4030\tTb927.10.4030\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4040\tTb927.10.4040\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\t3-keto-dihydrosphingosine reductase\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4040\tTb927.10.4040\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\t3-keto-dihydrosphingosine reductase\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4040\tTb927.10.4040\t\tGO:0005789\tPMID:15953549\tEXP\t\tC\t3-keto-dihydrosphingosine reductase\t\tmRNA\ttaxon:185431\t20100727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4040\tTb927.10.4040\t\tGO:0006633\tPMID:20382188\tEXP\t\tP\t3-keto-dihydrosphingosine reductase\t\tmRNA\ttaxon:185431\t20100727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4040\tTb927.10.4040\t\tGO:0047560\tPMID:20382188\tEXP\t\tF\t3-keto-dihydrosphingosine reductase\t\tmRNA\ttaxon:185431\t20100727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4050\tTb927.10.4050\t\tGO:0004758\tGO_REF:0000012\tISA\tUniProtKB:O15270\tF\tserine palmitoyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4050\tTb927.10.4050\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tserine palmitoyltransferase, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4050\tTb927.10.4050\t\tGO:0009058\tGO_REF:0000011\tISM\tInterPro:IPR004839\tP\tserine palmitoyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4060\tTb927.10.4060\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAnkyrin repeats (3 copies), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4060\tTb927.10.4060\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tAnkyrin repeats (3 copies), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4060\tTb927.10.4060\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tAnkyrin repeats (3 copies), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4070\tTb927.10.4070\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4080\tTb927.10.4080\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4080\tTb927.10.4080\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4080\tTb927.10.4080\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4090\tTb927.10.4090\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4090\tTb927.10.4090\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.410\tTb927.10.410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4100\tTb927.10.4100\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4100\tTb927.10.4100\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4110\tRPL30\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000231\tF\t60S ribosomal protein L30\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4110\tRPL30\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L30\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4110\tRPL30\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000231\tC\t60S ribosomal protein L30\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4110\tRPL30\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000231\tP\t60S ribosomal protein L30\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4120\tRPL30\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000231\tF\t60S ribosomal protein L30\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4120\tRPL30\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000231\tC\t60S ribosomal protein L30\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4120\tRPL30\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000231\tC\t60S ribosomal protein L30\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4120\tRPL30\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000231\tP\t60S ribosomal protein L30\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4130\tNDUFA5\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase B13 subunit\t\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4130\tNDUFA5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-ubiquinone oxidoreductase B13 subunit\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4130\tNDUFA5\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase B13 subunit\t\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4140\tTb927.10.4140\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF1242), putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4160\tTb927.10.4160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted zinc finger protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4160\tTb927.10.4160\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR001841\tF\tpredicted zinc finger protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4170\tTZP292\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4170\tTZP292\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4180\tTb927.10.4180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4180\tTb927.10.4180\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.420\tEXO99\t\tGO:0000145\tPMID:28114397\tIDA\t\tC\tExocyst complex component EXO99\t\tmRNA\ttaxon:185431\t20170320\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.420\tEXO99\t\tGO:0006897\tPMID:28114397\tIMP\t\tP\tExocyst complex component EXO99\t\tmRNA\ttaxon:185431\t20170320\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.420\tEXO99\t\tGO:0020016\tPMID:28114397\tIDA\t\tC\tExocyst complex component EXO99\t\tmRNA\ttaxon:185431\t20170320\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4200\tKKT24\t\tGO:0000776\tPMID:31795916\tHDA\t\tC\tKinetoplastid kinetochore protein 24\t\tmRNA\ttaxon:185431\t20200313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4200\tKKT24\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tKinetoplastid kinetochore protein 24\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4210\tBBP38\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4210\tBBP38\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4220\tTb927.10.4220\t\tGO:0042162\tPMID:29385523\tIDA\t\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4230\tTb927.10.4230\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4240\tTb927.10.4240\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4240\tTb927.10.4240\t\tGO:0005739\tPMID:19834910\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20200408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4240\tTb927.10.4240\t\tGO:0005743\tPMID:19834910\tHDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4250\tARL2\t\tGO:0000281\tPMID:20653091\tIMP\tGeneDB:Tb927.10.4250\tP\tADP-ribosylation factor-like 2, arl2\t\tmRNA\ttaxon:185431\t20100804\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4250\tARL2\t\tGO:0005737\tPMID:20653091\tIMP\tGeneDB:Tb927.10.4250\tC\tADP-ribosylation factor-like 2, arl2\t\tmRNA\ttaxon:185431\t20100804\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4250\tARL2\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tADP-ribosylation factor-like 2, arl2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4270\tTb927.10.4270\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tcoatomer subunit zeta, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4280\tTb927.10.4280\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tubiquinol-cytochrome c reductase complex 14 kda protein\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4280\tTb927.10.4280\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tubiquinol-cytochrome c reductase complex 14 kda protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4280\tTb927.10.4280\t\tGO:0005750\tPMID:21610103\tIDA\t\tC\tubiquinol-cytochrome c reductase complex 14 kda protein\t\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4280\tTb927.10.4280\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tubiquinol-cytochrome c reductase complex 14 kda protein\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.430\tTb927.10.430\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tperoxidase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.430\tTb927.10.430\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tperoxidase, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4300\tHKT1\t\tGO:0006813\tPMID:20190075\tIDA\t\tP\tTrk system potassium uptake protein\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4300\tHKT1\t\tGO:0055075\tPMID:20190075\tIDA\t\tP\tTrk system potassium uptake protein\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4310\tPHB2\t\tGO:0001302\tGO_REF:0000012\tISA\tUniProtKB:P40961\tP\tprohibitin 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4310\tPHB2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprohibitin 2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4310\tPHB2\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P40961\tC\tprohibitin 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4310\tPHB2\t\tGO:0006508\tGO_REF:0000012\tISA\tUniProtKB:P40961\tP\tprohibitin 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4310\tPHB2\t\tGO:0070129\tPMID:19683530\tIMP\tGeneDB:Tb927.8.4810\tP\tprohibitin 2, putative\t\tmRNA\ttaxon:185431\t20090917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0003863\tGO_REF:0000012\tISA\tUniProtKB:P21953\tF\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0005739\tPMID:15223320\tISS\t\tC\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0005739\tPMID:15223320|GO_REF:0000012\tISS\tUniProtKB:P21953\tC\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0005947\tGO_REF:0000012\tISA\tUniProtKB:P21953\tC\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR005475\tP\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4340\tTb927.10.4340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4370\tTb927.10.4370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4370\tTb927.10.4370\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.440\tTb927.10.440\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4400\tTb927.10.4400\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4410\tTb927.10.4410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4410\tTb927.10.4410\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4410\tTb927.10.4410\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4420\tTb927.10.4420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4420\tTb927.10.4420\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4420\tTb927.10.4420\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4430\tPUF1\t\tGO:0003723\tPMID:11897132\tTAS\t\tF\tpumillo RNA binding protein PUF1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4430\tPUF1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tpumillo RNA binding protein PUF1\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4430\tPUF1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpumillo RNA binding protein PUF1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4430\tPUF1\t\tGO:0005737\tPMID:11897132\tIDA\t\tC\tpumillo RNA binding protein PUF1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4430\tPUF1\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tpumillo RNA binding protein PUF1\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4430\tPUF1\t\tGO:0016049\tPMID:11897132\tIMP\t\tP\tpumillo RNA binding protein PUF1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4430\tPUF1\t\tGO:0016071\tGO_REF:0000011\tISM\tInterPro:IPR001313\tP\tpumillo RNA binding protein PUF1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4440\tSAP\t\tGO:0003677\tPMID:33660774\tIDA\t\tF\tSAP DNA binding domain containing protein\t\tmRNA\ttaxon:185431\t20210708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4440\tSAP\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSAP DNA binding domain containing protein\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4440\tSAP\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tSAP DNA binding domain containing protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4440\tSAP\t\tGO:0010468\tPMID:33660774\tIMP\t\tP\tSAP DNA binding domain containing protein\t\tmRNA\ttaxon:185431\t20210708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4440\tSAP\t\tGO:0034399\tPMID:33660774\tIDA\t\tC\tSAP DNA binding domain containing protein\t\tmRNA\ttaxon:185431\t20210708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4460\tTb927.10.4460\t\tGO:0003880\tGO_REF:0000011\tISM\tInterPro:IPR007213\tF\tleucine carboxyl methyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4460\tTb927.10.4460\t\tGO:0006464\tGO_REF:0000012\tISA\tUniProtKB:Q9UIC8\tP\tleucine carboxyl methyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4480\tTb927.10.4480\t\tGO:0003684\tGO_REF:0000011\tISM\tInterPro:IPR001126\tF\tDNA damage repair protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4480\tTb927.10.4480\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tDNA damage repair protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4480\tTb927.10.4480\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA damage repair protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4480\tTb927.10.4480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA damage repair protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4480\tTb927.10.4480\t\tGO:0006281\tGO_REF:0000011\tISM\tInterPro:IPR001126\tP\tDNA damage repair protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4490\tTb927.10.4490\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4490\tTb927.10.4490\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.450\tCMF62\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tMicrotubule-binding protein MIP-T3, putative\tIFT54|DYF-11\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.450\tCMF62\t\tGO:0030992\tPMID:20923419\tIPI\tGeneDB:Tb927.3.3000\tC\tMicrotubule-binding protein MIP-T3, putative\tIFT54|DYF-11\tmRNA\ttaxon:185431\t20170206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.450\tCMF62\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tMicrotubule-binding protein MIP-T3, putative\tIFT54|DYF-11\tmRNA\ttaxon:185431\t20090527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4500\tCMT1\t\tGO:0006370\tGO_REF:0000011\tISM\tInterPro:IPR004971\tP\tcap guanine-N7 methyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4500\tCMT1\t\tGO:0008168\tGO_REF:0000011\tISM\tInterPro:IPR001601\tF\tcap guanine-N7 methyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4500\tCMT1\t\tGO:0009452\tPMID:16431985\tIDA\t\tP\tcap guanine-N7 methyltransferase\t\tmRNA\ttaxon:185431\t20160720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4510\tTb927.10.4510\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tPUB domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4520\tTb927.10.4520\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR001345\tF\t6-phosphofructo-2-kinase/fructose-2,6-bisphosphatas, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4520\tTb927.10.4520\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001345\tP\t6-phosphofructo-2-kinase/fructose-2,6-bisphosphatas, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4540\tTb927.10.4540\t\tGO:0003779\tGO_REF:0000002\tISS\t\tF\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4540\tTb927.10.4540\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4540\tTb927.10.4540\t\tGO:0005885\tGO_REF:0000002\tISS\t\tC\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4540\tTb927.10.4540\t\tGO:0007010\tGO_REF:0000002\tISS\t\tP\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4540\tTb927.10.4540\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4540\tTb927.10.4540\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4550\tTb927.10.4550\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4560\tTb927.10.4560\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\telongation factor 2\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4560\tTb927.10.4560\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR000795\tF\telongation factor 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4560\tTb927.10.4560\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\telongation factor 2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4560\tTb927.10.4560\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000795\tP\telongation factor 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4560\tTb927.10.4560\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\telongation factor 2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4570\tTb927.10.4570\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\telongation factor 2\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4570\tTb927.10.4570\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR000795\tF\telongation factor 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4570\tTb927.10.4570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\telongation factor 2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4570\tTb927.10.4570\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000795\tP\telongation factor 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4580\tTb927.10.4580\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4580\tTb927.10.4580\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4580\tTb927.10.4580\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4590\tTb927.10.4590\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial inner membrane signal peptidase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4590\tTb927.10.4590\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tmitochondrial inner membrane signal peptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4590\tTb927.10.4590\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial inner membrane signal peptidase, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4590\tTb927.10.4590\t\tGO:0006465\tGO_REF:0000024\tISS\t\tP\tmitochondrial inner membrane signal peptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4590\tTb927.10.4590\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR006198\tP\tmitochondrial inner membrane signal peptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4590\tTb927.10.4590\t\tGO:0008236\tGO_REF:0000011\tISM\tInterPro:IPR006198\tF\tmitochondrial inner membrane signal peptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4590\tTb927.10.4590\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmitochondrial inner membrane signal peptidase, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.460\tNRKC\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tNIMA-related protein kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.460\tNRKC\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tNIMA-related protein kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.460\tNRKC\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNIMA-related protein kinase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.460\tNRKC\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNIMA-related protein kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.460\tNRKC\t\tGO:0032465\tPMID:16608878\tIDA\t\tP\tNIMA-related protein kinase\t\tmRNA\ttaxon:185431\t20091118\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.460\tNRKC\t\tGO:0036064\tPMID:16608878\tIDA\t\tC\tNIMA-related protein kinase\t\tmRNA\ttaxon:185431\t20091118\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4600\tSET7\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 7, putative\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4610\tDPMS\t\tGO:0004582\tPMID:10329621|PMID:19497128\tISO\tGeneDB:LmjF.36.0220\tF\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20090930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4610\tDPMS\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4610\tDPMS\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4610\tDPMS\t\tGO:0006506\tPMID:10329621|PMID:11689705\tISO\tGeneDB:LmjF.36.0220\tP\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20090930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4610\tDPMS\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4620\tPPIase\t\tGO:0003755\tGO_REF:0000012\tISA\tUniProtKB:P20081\tF\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4620\tPPIase\t\tGO:0005515\tPMID:26272611\tIPI\tGeneDB:Tb927.7.6310\tF\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4620\tPPIase\t\tGO:0005528\tGO_REF:0000012\tISA\tUniProtKB:FKB12_DROME\tF\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4620\tPPIase\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4620\tPPIase\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001179\tP\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4620\tPPIase\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4620\tPPIase\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4630\tTb927.10.4630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4640\tEIF3L\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\teukaryotic translation initiation factor 3 subunit l\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4640\tEIF3L\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tF\teukaryotic translation initiation factor 3 subunit l\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4640\tEIF3L\t\tGO:0005737\tPMID:25539953\tISO\tGeneDB:LmjF.36.0250\tC\teukaryotic translation initiation factor 3 subunit l\t\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4640\tEIF3L\t\tGO:0005852\tPMID:25539953\tISO\tGeneDB:LmjF.36.0250\tC\teukaryotic translation initiation factor 3 subunit l\t\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4640\tEIF3L\t\tGO:0005852\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tC\teukaryotic translation initiation factor 3 subunit l\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4640\tEIF3L\t\tGO:0006413\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tP\teukaryotic translation initiation factor 3 subunit l\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4660\tTb927.10.4660\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tTranscription factor S-II (TFIIS), central domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4670\tTb927.10.4670\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4680\tNH5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMutt-Nudix-related hydrolase 5, putative\tNudix5\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4680\tNH5\tNOT\tGO:0031087\tPMID:26038549\tIDA\t\tP\tMutt-Nudix-related hydrolase 5, putative\tNudix5\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4680\tNH5\tNOT\tGO:0050072\tPMID:26038549\tIDA\t\tF\tMutt-Nudix-related hydrolase 5, putative\tNudix5\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4690\tTb927.10.4690\t\tGO:0003777\tGO_REF:0000024\tISS\t\tF\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4690\tTb927.10.4690\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001372\tC\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4690\tTb927.10.4690\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4690\tTb927.10.4690\t\tGO:0007017\tGO_REF:0000024\tISS\t\tP\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.470\tTb927.10.470\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcholine dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.470\tTb927.10.470\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcholine dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.470\tTb927.10.470\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tcholine dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.470\tTb927.10.470\t\tGO:0008812\tGO_REF:0000012\tISA\tUniProtKB:Q8CMY2\tF\tcholine dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.470\tTb927.10.470\t\tGO:0019285\tGO_REF:0000012\tISA\tUniProtKB:Q8CMY2\tP\tcholine dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4700\tTb927.10.4700\t\tGO:0004582\tGO_REF:0000002\tIMP\t\tF\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4700\tTb927.10.4700\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4700\tTb927.10.4700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4700\tTb927.10.4700\t\tGO:0005789\tGO_REF:0000002\tIC\t\tC\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4700\tTb927.10.4700\t\tGO:0006488\tGO_REF:0000002\tIMP\t\tP\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4700\tTb927.10.4700\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4710\tPSB4\t\tGO:0004175\tPMID:9741626\tTAS\t\tF\t20S proteasome subunit\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4710\tPSB4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t20S proteasome subunit\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4710\tPSB4\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001353\tP\t20S proteasome subunit\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4710\tPSB4\t\tGO:0019774\tPMID:7499235\tTAS\t\tC\t20S proteasome subunit\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4720\tTb927.10.4720\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tAnkyrin repeats (many copies), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4720\tTb927.10.4720\t\tGO:0097543\tPMID:27519801\tIDA\t\tC\tAnkyrin repeats (many copies), putative\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4730\tTb927.10.4730\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR001352\tF\tribonuclease HII, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4730\tTb927.10.4730\t\tGO:0004521\tGO_REF:0000011\tISM\tPfam:PF01351\tF\tribonuclease HII, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4730\tTb927.10.4730\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tribonuclease HII, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4730\tTb927.10.4730\t\tGO:0006401\tGO_REF:0000011\tISM\tInterPro:IPR001352\tP\tribonuclease HII, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4740\tTb927.10.4740\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR007264\tF\tnucleolar RNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4740\tTb927.10.4740\t\tGO:0005730\tGO_REF:0000011\tISM\tInterPro:IPR007264\tC\tnucleolar RNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4740\tTb927.10.4740\t\tGO:0016072\tGO_REF:0000011\tISM\tInterPro:IPR007264\tP\tnucleolar RNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4760\tTb927.10.4760\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tIntegral membrane protein DUF106, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4770\tTb927.10.4770\t\tGO:0016308\tGO_REF:0000011\tISM\tInterPro:IPR002498\tF\tphosphatidylinositol-4-phosphate 5-kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4770\tTb927.10.4770\t\tGO:0046488\tGO_REF:0000012\tISA\tUniProtKB:Q80XI4\tP\tphosphatidylinositol-4-phosphate 5-kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4780\tGPIdeAc\t\tGO:0006506\tPMID:11532956\tTAS\t\tP\tGPI inositol deacylase precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4780\tGPIdeAc\t\tGO:0016020\tPMID:11532956\tTAS\t\tC\tGPI inositol deacylase precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4780\tGPIdeAc\t\tGO:0050185\tPMID:11532956\tIDA\t\tF\tGPI inositol deacylase precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4790\tTb927.10.4790\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.480\tTb927.10.480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4800\tJBP3\t\tGO:0006369\tPMID:32084124\tIMP\t\tP\tJ binding protein 3, putative\t\tmRNA\ttaxon:185431\t20200723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4810\tTb927.10.4810\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4830\tTb927.10.4830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4830\tTb927.10.4830\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4830\tTb927.10.4830\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4850\tTb927.10.4850\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4860\tTb927.10.4860\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4870\tTb927.10.4870\t\tGO:0006400\tGO_REF:0000011\tISM\tPfam:PF01207\tP\ttRNA-dihydrouridine synthase 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4870\tTb927.10.4870\t\tGO:0017150\tGO_REF:0000011\tISM\tPfam:PF01207\tF\ttRNA-dihydrouridine synthase 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4870\tTb927.10.4870\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\ttRNA-dihydrouridine synthase 2, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4870\tTb927.10.4870\t\tGO:0050660\tGO_REF:0000011\tISM\tInterPro:IPR001269\tF\ttRNA-dihydrouridine synthase 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4880\tTb927.10.4880\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4880\tTb927.10.4880\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4890\tTb927.10.4890\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc-finger of a C2HC-type, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4890\tTb927.10.4890\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tzinc-finger of a C2HC-type, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4890\tTb927.10.4890\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tzinc-finger of a C2HC-type, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4900\tJ52\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTPR-repeat-containing chaperone protein DNAJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4900\tJ52\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001623\tP\tTPR-repeat-containing chaperone protein DNAJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4910\tMCP4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4910\tMCP4\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4910\tMCP4\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20110718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4910\tMCP4\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4910\tMCP4\t\tGO:0005743\tGO_REF:0000011\tISM\tInterPro:IPR002067\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4910\tMCP4\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4930\tTb927.10.4930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4930\tTb927.10.4930\t\tGO:0008287\tGO_REF:0000012\tISA\tUniProtKB:O75688\tC\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4930\tTb927.10.4930\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4930\tTb927.10.4930\t\tGO:0016791\tGO_REF:0000011\tISM\tPfam:PF00481\tF\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4930\tTb927.10.4930\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4930\tTb927.10.4930\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0000281\tPMID:12123446\tTAS\t\tP\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20100330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0004672\tPMID:12123446\tIDA\t\tF\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0005829\tPMID:20231285\tIDA\t\tC\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20100616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0006468\tPMID:12123446\tIDA\t\tP\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0020023\tPMID:12123446\tIDA\t\tC\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20100330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0051726\tPMID:20231285\tEXP\t\tP\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20100616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:1902412\tPMID:24453978\tIMP\t\tP\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4950\tSSm2-2\t\tGO:0000365\tPMID:19429779\tIPI\tGeneDB:Tb927.7.3120\tP\tU2 small nuclear ribonucleoprotein 16.5K\t\tmRNA\ttaxon:185431\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4950\tSSm2-2\t\tGO:0000380\tPMID:17105994\tIDA\t\tP\tU2 small nuclear ribonucleoprotein 16.5K\t\tmRNA\ttaxon:185431\t20120905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4950\tSSm2-2\t\tGO:0003723\tPMID:17105994\tIDA\t\tF\tU2 small nuclear ribonucleoprotein 16.5K\t\tmRNA\ttaxon:185431\t20120905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4950\tSSm2-2\t\tGO:0005634\tPMID:17105994\tIDA\t\tC\tU2 small nuclear ribonucleoprotein 16.5K\t\tmRNA\ttaxon:185431\t20120905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4950\tSSm2-2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tU2 small nuclear ribonucleoprotein 16.5K\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4950\tSSm2-2\t\tGO:0005686\tPMID:17105994\tIDA\t\tC\tU2 small nuclear ribonucleoprotein 16.5K\t\tmRNA\ttaxon:185431\t20120905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4950\tSSm2-2\t\tGO:0097525\tPMID:19429779\tIPI\tGeneDB:Tb927.7.3120\tC\tU2 small nuclear ribonucleoprotein 16.5K\t\tmRNA\ttaxon:185431\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4980\tDSK2\t\tGO:0006260\tGO_REF:0000012\tISA\tUniProtKB:P48510\tP\tubiquitin-like protein DSK2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4980\tDSK2\t\tGO:0007059\tGO_REF:0000012\tISA\tUniProtKB:P48510\tP\tubiquitin-like protein DSK2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4980\tDSK2\t\tGO:0030674\tGO_REF:0000012\tISA\tUniProtKB:P48510\tF\tubiquitin-like protein DSK2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4980\tDSK2\t\tGO:0051276\tGO_REF:0000012\tISA\tUniProtKB:P48510\tP\tubiquitin-like protein DSK2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0000278\tPMID:7557404\tTAS\t\tP\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0005515\tPMID:12682070\tIPI\tGeneDB:Tb927.11.16720\tF\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0005515\tPMID:10722661\tIPI\tGeneDB:Tb927.11.14080\tF\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0006468\tGO_REF:0000002\tISO\tGeneDB:TcCLB.506583.40\tP\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0051726\tGO_REF:0000002\tISO\tGeneDB:TcCLB.506583.40\tP\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0097472\tGO_REF:0000002\tISO\tGeneDB:TcCLB.506583.40\tF\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5010\tEF-G1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tElongation factor G1, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5010\tEF-G1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tElongation factor G1, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140129\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5010\tEF-G1\t\tGO:0005739\tPMID:24033548\tIDA\t\tC\tElongation factor G1, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5010\tEF-G1\t\tGO:0006119\tPMID:24033548\tIMP\t\tP\tElongation factor G1, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0000340\tPMID:24962368\tIMP\t\tF\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0000342\tPMID:24962368\tIMP\t\tF\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0005515\tPMID:24962368\tIPI\tGeneDB:Tb927.9.5460\tF\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0005737\tPMID:24962368\tIDA\t\tC\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0006412\tPMID:24962368\tIMP\t\tP\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0016281\tPMID:24962368\tIPI\tGeneDB:Tb927.10.5020|GeneDB:Tb927.9.5460\tC\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0048870\tPMID:24962368\tIMP\t\tP\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5020\teif4e5\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tEukaryotic translation initiation factor 4E type 5\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5030\tTb927.10.5030\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002906\tF\tubiquitin/ribosomal protein S27a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5030\tTb927.10.5030\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin/ribosomal protein S27a, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5030\tTb927.10.5030\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002906\tC\tubiquitin/ribosomal protein S27a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5030\tTb927.10.5030\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002906\tP\tubiquitin/ribosomal protein S27a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5030\tTb927.10.5030\t\tGO:0020037\tGO_REF:0000024\tISS\tProsite:PS00190\tF\tubiquitin/ribosomal protein S27a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5030\tTb927.10.5030\t\tGO:0042254\tGO_REF:0000011\tISM\tInterPro:IPR002906\tP\tubiquitin/ribosomal protein S27a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5040\tJ20\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5040\tJ20\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5050\tTb927.10.5050\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tmitochondrial ATP synthase epsilon chain\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5050\tTb927.10.5050\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tmitochondrial ATP synthase epsilon chain\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5050\tTb927.10.5050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial ATP synthase epsilon chain\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5050\tTb927.10.5050\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial ATP synthase epsilon chain\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5060\tTb927.10.5060\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tProtein of unknown function (DUF3592), putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5070\tRH2A\t\tGO:0000086\tPMID:31350892\tIMP\t\tP\tribonuclease H, putative\t\tmRNA\ttaxon:185431\t20200724\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5070\tRH2A\t\tGO:0004523\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00729\tF\tribonuclease H, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5070\tRH2A\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P53942\tC\tribonuclease H, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5070\tRH2A\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tribonuclease H, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5070\tRH2A\t\tGO:0006401\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00729\tP\tribonuclease H, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5070\tRH2A\t\tGO:0010468\tPMID:31350892\tIMP\t\tP\tribonuclease H, putative\t\tmRNA\ttaxon:185431\t20200724\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5080\tTTA2\t\tGO:0003923\tPMID:12958211\tIMP\t\tF\tGPI transamidase component Tta2\t\tmRNA\ttaxon:185431\t20100112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5080\tTTA2\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tGPI transamidase component Tta2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5080\tTTA2\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tGPI transamidase component Tta2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5080\tTTA2\t\tGO:0042765\tPMID:12958211\tIPI\t\tC\tGPI transamidase component Tta2\t\tmRNA\ttaxon:185431\t20100112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5090\tESP18\t\tGO:0005768\tPMID:25931509\tIDA\t\tC\tEnriched in surface-labeled proteome protein 18\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5090\tESP18\t\tGO:0009986\tPMID:25931509\tIDA\t\tC\tEnriched in surface-labeled proteome protein 18\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.510\tPOMP19\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 19\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.510\tPOMP19\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 19\t\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5110\tKREPA4\t\tGO:0003723\tPMID:12649499\tRCA\t\tF\tKREPA4\tMP24\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5110\tKREPA4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tKREPA4\tMP24\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5110\tKREPA4\t\tGO:0009451\tPMID:12649499\tTAS\t\tP\tKREPA4\tMP24\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5110\tKREPA4\t\tGO:0031019\tPMID:12649499\tIDA\t\tC\tKREPA4\tMP24\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5110\tKREPA4\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPA4\tMP24\tmRNA\ttaxon:185431\t20100205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5110\tKREPA4\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tKREPA4\tMP24\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0003723\tPMID:18065716\tIDA\t\tF\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20110919\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0004519\tPMID:18065716\tIDA\t\tF\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20110919\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0009451\tPMID:11564867\tTAS\t\tP\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20100205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0031019\tPMID:11564867\tIDA\t\tC\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5130\tTb927.10.5130\t\tGO:0005739\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tC\tProtein C21orf2 homolog, putative\t\tmRNA\ttaxon:185431\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5130\tTb927.10.5130\t\tGO:0007010\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tP\tProtein C21orf2 homolog, putative\t\tmRNA\ttaxon:185431\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5130\tTb927.10.5130\t\tGO:0008360\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tP\tProtein C21orf2 homolog, putative\t\tmRNA\ttaxon:185431\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5130\tTb927.10.5130\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tProtein C21orf2 homolog, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5130\tTb927.10.5130\t\tGO:0060271\tGO_REF:0000002\tISA\tUniProtKB:CU002_MOUSE\tP\tProtein C21orf2 homolog, putative\t\tmRNA\ttaxon:185431\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0000281\tPMID:24453978|PMID:24213350\tIMP\t\tP\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0005634\tPMID:24213350\tIDA\t\tC\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0005829\tPMID:24213350\tIDA\t\tC\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5150\tZC3H31\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5150\tZC3H31\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5160\tTb927.10.5160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5180\tJ67\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTPR-repeat-containing chaperone protein DNAJ, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5180\tJ67\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001623\tP\tTPR-repeat-containing chaperone protein DNAJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5190\tTb927.10.5190\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tKinesin associated protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5190\tTb927.10.5190\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tKinesin associated protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.520\tTb927.10.520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.520\tTb927.10.520\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.520\tTb927.10.520\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.520\tTb927.10.520\t\tGO:0005739\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20090526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.520\tTb927.10.520\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5200\tTb927.10.5200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5210\tp52\t\tGO:0003700\tPMID:17259543\tIDA\t\tF\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20100916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5210\tp52\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5210\tp52\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor subunit\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5220\tTb927.10.5220\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5230\tARL13\t\tGO:0005085\tPMID:30097558\tIDA\t\tF\tADP-ribosylation factor-like protein 13, putative\t\tmRNA\ttaxon:185431\t20180831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5230\tARL13\t\tGO:0005515\tPMID:30097558\tIPI\tGeneDB:Tb927.3.3450\tF\tADP-ribosylation factor-like protein 13, putative\t\tmRNA\ttaxon:185431\t20180831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5230\tARL13\t\tGO:0005525\tGO_REF:0000002\tISS\t\tF\tADP-ribosylation factor-like protein 13, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5230\tARL13\t\tGO:0005929\tPMID:30097558\tIDA\t\tC\tADP-ribosylation factor-like protein 13, putative\t\tmRNA\ttaxon:185431\t20180831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5230\tARL13\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor-like protein 13, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5230\tARL13\t\tGO:0015031\tGO_REF:0000002\tISS\t\tP\tADP-ribosylation factor-like protein 13, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5230\tARL13\t\tGO:0060271\tPMID:30097558\tIMP\t\tP\tADP-ribosylation factor-like protein 13, putative\t\tmRNA\ttaxon:185431\t20180831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5240\tTb927.10.5240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcAMP binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5250\tZC3H32\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5250\tZC3H32\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5250\tZC3H32\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein family member, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5260\tTZP125\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tC2 domain containing protein, putative\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0004672\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tF\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0004708\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tF\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20160115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0005737\tPMID:21396364\tIDA\t\tC\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20120918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0006468\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tP\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0043406\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tP\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20160115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0046777\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tP\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20160115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0051019\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tF\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5280\tTb927.10.5280\t\tGO:0000375\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tP\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5280\tTb927.10.5280\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tF\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5280\tTb927.10.5280\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5280\tTb927.10.5280\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5280\tTb927.10.5280\t\tGO:0005681\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5280\tTb927.10.5280\t\tGO:0008380\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tP\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5290\tNFU3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tHIRA-interacting protein 5, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5290\tNFU3\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tHIRA-interacting protein 5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5290\tNFU3\t\tGO:0005739\tPMID:27181928\tIDA\t\tC\tHIRA-interacting protein 5, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5290\tNFU3\t\tGO:0006879\tGO_REF:0000012\tISA\tUniProtKB:P32860\tP\tHIRA-interacting protein 5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.530\tESP22\t\tGO:0005768\tPMID:25931509\tIDA\t\tC\tPlasma-membrane choline transporter, putative\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.530\tESP22\t\tGO:0020016\tPMID:25931509\tIDA\t\tC\tPlasma-membrane choline transporter, putative\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5300\tTb927.10.5300\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\teukaryotic translation initiation factor 6 (eIF-6), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5300\tTb927.10.5300\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\teukaryotic translation initiation factor 6 (eIF-6), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5310\tAMPKa1\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tAMP-activated kinase, alpha 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5310\tAMPKa1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tAMP-activated kinase, alpha 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5310\tAMPKa1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAMP-activated kinase, alpha 1\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5310\tAMPKa1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAMP-activated kinase, alpha 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5320\tKREN3\t\tGO:0004129\tPMID:17954557\tIDA\t\tF\tRNA editing endoribonuclease\tMP67|KREPB2|REN3\tmRNA\ttaxon:185431\t20110628\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5320\tKREN3\t\tGO:0004518\tPMID:12649499\tRCA\tPfam:PF00636\tF\tRNA editing endoribonuclease\tMP67|KREPB2|REN3\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5320\tKREN3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA editing endoribonuclease\tMP67|KREPB2|REN3\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5320\tKREN3\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tRNA editing endoribonuclease\tMP67|KREPB2|REN3\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5320\tKREN3\t\tGO:0016556\tPMID:12649499\tTAS\t\tP\tRNA editing endoribonuclease\tMP67|KREPB2|REN3\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5320\tKREN3\t\tGO:0031019\tPMID:12649499\tIDA\t\tC\tRNA editing endoribonuclease\tMP67|KREPB2|REN3\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5320\tKREN3\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tRNA editing endoribonuclease\tMP67|KREPB2|REN3\tmRNA\ttaxon:185431\t20100205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0000314\tGO_REF:0000011\tISM\tPfam:PF00416\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR001892\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001892\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001892\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001892\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001892\tP\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0000314\tGO_REF:0000011\tISM\tPfam:PF00416\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR001892\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001892\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001892\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001892\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001892\tP\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5350\tTb927.10.5350\t\tGO:0003777\tGO_REF:0000011\tISM\tInterPro:IPR004273\tF\tdynein heavy chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5350\tTb927.10.5350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdynein heavy chain, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5350\tTb927.10.5350\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tdynein heavy chain, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5350\tTb927.10.5350\t\tGO:0007018\tGO_REF:0000011\tISM\tInterPro:IPR004273\tP\tdynein heavy chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5350\tTb927.10.5350\t\tGO:0030286\tGO_REF:0000011\tISM\tInterPro:IPR004273\tC\tdynein heavy chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5350\tTb927.10.5350\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tdynein heavy chain, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5360\tTb927.10.5360\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR005326\tF\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5360\tTb927.10.5360\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5360\tTb927.10.5360\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q9VB14\tC\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5360\tTb927.10.5360\t\tGO:0006412\tGO_REF:0000012\tISA\tUniProtKB:Q07254\tP\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5360\tTb927.10.5360\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5360\tTb927.10.5360\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5370\tTb927.10.5370\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR005326\tF\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5370\tTb927.10.5370\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5370\tTb927.10.5370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5370\tTb927.10.5370\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q9VB14\tC\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5370\tTb927.10.5370\t\tGO:0006412\tGO_REF:0000012\tISA\tUniProtKB:Q07254\tP\t40S ribosomal protein S10, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5380\tIFT122\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tintraflagellar transport protein 122\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5380\tIFT122\t\tGO:0035721\tPMID:18094047\tIMP\t\tP\tintraflagellar transport protein 122\t\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5380\tIFT122\t\tGO:0035735\tPMID:18094047\tIMP\t\tP\tintraflagellar transport protein 122\t\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5380\tIFT122\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tintraflagellar transport protein 122\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5390\tTb927.10.5390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\t\tGO:0000993\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508319.40\tF\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\tNOT\tGO:0001042\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508319.40\tF\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508319.40\tC\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\t\tGO:0016071\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508319.40\tP\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5400\tTb927.10.5400\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5400\tTb927.10.5400\t\tGO:0005739\tPMID:19834910\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20200408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5400\tTb927.10.5400\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5400\tTb927.10.5400\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5420\tTb927.10.5420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5430\tTb927.10.5430\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tFlagellar C1a complex subunit C1a-32, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0004525\tPMID:16269544\tIMP\t\tF\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20171002\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0004525\tPMID:12649499\tRCA\tInterPro:IPR000999\tF\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0016556\tPMID:16269544\tIMP\t\tP\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20171002\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0016556\tPMID:12649499\tTAS\t\tP\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0031019\tPMID:12649499\tIDA\t\tC\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20100205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0003677\tPMID:21076155\tIDA\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0005634\tPMID:21076155\tIDA\t\tC\tISWI complex protein\t\tmRNA\ttaxon:185431\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tISWI complex protein\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tISWI complex protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tISWI complex protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0006338\tPMID:21076155\tIMP\t\tP\tISWI complex protein\t\tmRNA\ttaxon:185431\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0031010\tPMID:26378228\tIPI\tGeneDB:Tb927.11.10330|GeneDB:Tb927.7.1060|GeneDB:Tb927.2.1810\tC\tISWI complex protein\t\tmRNA\ttaxon:185431\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0031555\tPMID:21076155\tIDA\t\tP\tISWI complex protein\t\tmRNA\ttaxon:185431\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0031935\tPMID:21076155\tIMP\t\tP\tISWI complex protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0044212\tPMID:26378228\tIDA\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0045892\tPMID:21076155\tIMP\t\tP\tISWI complex protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0045893\tPMID:21076155\tIMP\t\tP\tISWI complex protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5460\tTb927.10.5460\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000988\tF\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5460\tTb927.10.5460\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000988\tC\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5460\tTb927.10.5460\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5460\tTb927.10.5460\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000988\tC\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5460\tTb927.10.5460\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000988\tP\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5480\tTb927.10.5480\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000988\tF\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5480\tTb927.10.5480\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000988\tC\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5480\tTb927.10.5480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5480\tTb927.10.5480\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000988\tC\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5480\tTb927.10.5480\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000988\tP\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5490\tTb927.10.5490\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR003511\tF\tpredicted HORMA domain protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5490\tTb927.10.5490\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted HORMA domain protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.550\tTb927.10.550\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.550\tTb927.10.550\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.550\tTb927.10.550\t\tGO:1990900\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5500\tTb927.10.5500\t\tGO:0005739\tPMID:22158713\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5500\tTb927.10.5500\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5500\tTb927.10.5500\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5500\tTb927.10.5500\t\tGO:0030964\tPMID:22158713\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5520\tTb927.10.5520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAmmeMemoRadiSam system protein B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5520\tTb927.10.5520\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tAmmeMemoRadiSam system protein B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5520\tTb927.10.5520\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tAmmeMemoRadiSam system protein B, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5530\tTb927.10.5530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5540\tTb927.10.5540\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5550\tTb927.10.5550\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5550\tTb927.10.5550\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5560\tGPI10\t\tGO:0000030\tPMID:10954751\tTAS\t\tF\tGPI alpha-mannosyltransferase III\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5560\tGPI10\t\tGO:0006506\tPMID:10954751\tIGI\tUniProtKB:BAA94827\tP\tGPI alpha-mannosyltransferase III\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5570\tTb927.10.5570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5570\tTb927.10.5570\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5580\tTb927.10.5580\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5580\tTb927.10.5580\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20161206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5590\tTb927.10.5590\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR001932\tF\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5590\tTb927.10.5590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5590\tTb927.10.5590\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5590\tTb927.10.5590\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5590\tTb927.10.5590\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5590\tTb927.10.5590\t\tGO:0016791\tGO_REF:0000011\tISM\tPfam:PF00481\tF\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.560\tTb927.10.560\t\tGO:0000314\tGO_REF:0000011\tISM\tPfam:PF00366\tC\t40S ribosomal proteins S11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.560\tTb927.10.560\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal proteins S11, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.560\tTb927.10.560\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000266\tF\t40S ribosomal proteins S11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.560\tTb927.10.560\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000266\tC\t40S ribosomal proteins S11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.560\tTb927.10.560\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000266\tC\t40S ribosomal proteins S11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.560\tTb927.10.560\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000266\tP\t40S ribosomal proteins S11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5600\tTb927.10.5600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR002942\tF\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01018\tF\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001912\tC\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01018\tP\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5620\tALD\t\tGO:0004332\tPMID:32329788\tIDA\t\tF\tfructose-bisphosphate aldolase, glycosomal\t\tmRNA\ttaxon:185431\t20200520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5620\tALD\t\tGO:0006096\tPMID:32329788\tIDA\t\tP\tfructose-bisphosphate aldolase, glycosomal\t\tmRNA\ttaxon:185431\t20200520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5620\tALD\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tfructose-bisphosphate aldolase, glycosomal\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0000387\tPMID:19605687\tISO\tPfam:PF04938\tP\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0005515\tPMID:19605687\tIPI\tGeneDB:Tb927.11.15000\tF\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0005634\tPMID:19605687\tIPI\tGeneDB:Tb927.11.15000\tC\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0005681\tPMID:19605687\tISO\tPfam:PF04938\tC\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0008380\tPMID:19605687\tISO\tPfam:PF04938\tP\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0017069\tPMID:20592024\tTAS\t\tF\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0034730\tPMID:19605687\tIPI\tGeneDB:Tb927.11.15000\tC\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0045292\tPMID:20592024\tIMP\t\tP\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5640\tTbGEMIN2\t\tGO:0071024\tPMID:20592024\tIDA\t\tC\tGem-associated protein 2, putative\t\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5650\tTb927.10.5650\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5660\tJ5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5660\tJ5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5660\tJ5\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001623\tP\theat shock protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5670\tNAT1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tN-acetyltransferase subunit Nat1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5670\tNAT1\t\tGO:0006464\tPMID:11163439\tIC\tGO:0008080\tP\tN-acetyltransferase subunit Nat1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5670\tNAT1\t\tGO:0008080\tGO_REF:0000012\tISA\tUniProtKB:NAT1_YEAST\tF\tN-acetyltransferase subunit Nat1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.570\tTb927.10.570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSec8 exocyst complex component specific domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5700\tESP3\tNOT\tGO:0009986\tPMID:25931509\tIDA\t\tC\tEnriched in surface-labeled proteome protein 3\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5720\tTb927.10.5720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5750\tTb927.10.5750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tExtradiol ring-cleavage dioxygenase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5750\tTb927.10.5750\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tExtradiol ring-cleavage dioxygenase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5750\tTb927.10.5750\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tExtradiol ring-cleavage dioxygenase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5760\tADKD\t\tGO:0004017\tGO_REF:0000011\tISM\tPfam:PF00406\tF\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5760\tADKD\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000850\tF\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5760\tADKD\t\tGO:0015949\tGO_REF:0000011\tISM\tPfam:PF00406\tP\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5760\tADKD\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5760\tADKD\t\tGO:0020015\tPMID:15657034\tIDA\t\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20170616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0005634\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tC\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0005737\tPMID:10029305\tIDA\t\tC\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0016020\tPMID:10029305\tIDA\t\tC\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0016887\tPMID:10029305\tIDA\t\tF\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0016887\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tF\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0030970\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tP\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0042802\tPMID:10029305|PMID:11279035\tIDA\t\tF\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0051228\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tP\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0098554\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tC\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5780\tTb927.10.5780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamino acid tansporter, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5780\tTb927.10.5780\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid tansporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5780\tTb927.10.5780\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR002422\tC\tamino acid tansporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5780\tTb927.10.5780\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tamino acid tansporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5780\tTb927.10.5780\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tamino acid tansporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5790\tTb927.10.5790\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5800\tTb927.10.5800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5810\tTb927.10.5810\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tThe ARF-like 2 binding protein BART, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5810\tTb927.10.5810\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tThe ARF-like 2 binding protein BART, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5810\tTb927.10.5810\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tThe ARF-like 2 binding protein BART, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5820\tTb927.10.5820\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tpredicted RanGDP binding protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5830\tTb927.10.5830\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5830\tTb927.10.5830\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5840\tTb927.10.5840\t\tGO:0003746\tGO_REF:0000011\tISM\tInterPro:IPR001326\tF\ttranslation elongation factor 1-beta, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5840\tTb927.10.5840\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttranslation elongation factor 1-beta, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5840\tTb927.10.5840\t\tGO:0005853\tGO_REF:0000011\tISM\tInterPro:IPR001326\tC\ttranslation elongation factor 1-beta, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5840\tTb927.10.5840\t\tGO:0006414\tGO_REF:0000011\tISM\tInterPro:IPR001326\tP\ttranslation elongation factor 1-beta, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5870\tFAZ25\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 25\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5870\tFAZ25\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tFlagellum attachment zone protein 25\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5870\tFAZ25\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 25\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5880\tCAP67\t\tGO:0005856\tPMID:35447115\tIDA\t\tC\tCytoskeleton-associated protein 67 kDa\t\tmRNA\ttaxon:185431\t20220423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5880\tCAP67\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tCytoskeleton-associated protein 67 kDa\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5880\tCAP67\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\tCytoskeleton-associated protein 67 kDa\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5890\tTb927.10.5890\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGalactose oxidase, central domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5890\tTb927.10.5890\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tGalactose oxidase, central domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.590\tTb927.10.590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5900\tTb927.10.5900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5900\tTb927.10.5900\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5910\tBBP86\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\t\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5920\tTb927.10.5920\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5930\tNEK17-3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5930\tNEK17-3\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5930\tNEK17-3\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5940\tNEK17-2\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5940\tNEK17-2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5940\tNEK17-2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5940\tNEK17-2\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5940\tNEK17-2\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5950\tNEK17\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSerine/threonine-protein kinase NEK17, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5950\tNEK17\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSerine/threonine-protein kinase NEK17, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5950\tNEK17\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK17, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5950\tNEK17\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tSerine/threonine-protein kinase NEK17, putative\t\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5950\tNEK17\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tSerine/threonine-protein kinase NEK17, putative\t\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5960\tTb927.10.5960\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tengulfment and cell motility domain 2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5970\tTb927.10.5970\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR000315\tF\tpredicted zinc finger protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5980\tTb927.10.5980\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5980\tTb927.10.5980\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5990\tCEP57\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tCentrosomal protein of 57 kDa, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5990\tCEP57\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tCentrosomal protein of 57 kDa, putative\t\tmRNA\ttaxon:185431\t20170105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5990\tCEP57\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tCentrosomal protein of 57 kDa, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.600\tMRPL29\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein L29\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.600\tMRPL29\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein L29\t\tmRNA\ttaxon:185431\t20170530\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6010\tSCC3\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSTAG domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6020\tTb927.10.6020\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6030\tPSA1\t\tGO:0004175\tGO_REF:0000011\tISM\tInterPro:IPR000426\tF\tproteasome subunit alpha type-1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6030\tPSA1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tproteasome subunit alpha type-1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6030\tPSA1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome subunit alpha type-1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6030\tPSA1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tproteasome subunit alpha type-1, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6030\tPSA1\t\tGO:0005839\tPMID:10498178\tISS\t\tC\tproteasome subunit alpha type-1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6030\tPSA1\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001353\tP\tproteasome subunit alpha type-1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6030\tPSA1\t\tGO:0070565\tPMID:29385523\tIPI\tGeneDB:Tb927.10.12850\tC\tproteasome subunit alpha type-1, putative\t\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6050\tCHC\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tclathrin heavy chain\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6050\tCHC\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tclathrin heavy chain\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0000278\tPMID:18048338\tIMP\t\tP\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0000280\tPMID:30007364\tIMP\t\tP\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20180806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0000723\tPMID:30007364\tIMP\t\tP\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20180806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0001933\tPMID:30007364\tIMP\t\tP\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20220408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR001878\tF\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0005634\tPMID:30007364\tIDA\t\tC\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20180806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0033955\tPMID:18048338\tIMP\t\tP\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0043047\tPMID:30007364\tIMP\t\tF\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20180806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6070\tUMSBP1\t\tGO:0000278\tPMID:18048338\tIMP\t\tP\tuniversal minicircle sequence binding protein 1\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6070\tUMSBP1\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR001878\tF\tuniversal minicircle sequence binding protein 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6070\tUMSBP1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tuniversal minicircle sequence binding protein 1\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6070\tUMSBP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tuniversal minicircle sequence binding protein 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6070\tUMSBP1\t\tGO:0033955\tPMID:18048338\tIMP\t\tP\tuniversal minicircle sequence binding protein 1\t\tmRNA\ttaxon:185431\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6080\tTb927.10.6080\t\tGO:0004175\tPMID:9741626\tTAS\t\tF\tproteasome subunit beta type-5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6080\tTb927.10.6080\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001353\tP\tproteasome subunit beta type-5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6080\tTb927.10.6080\t\tGO:0019774\tPMID:7499235\tISS\t\tC\tproteasome subunit beta type-5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6090\tTb927.10.6090\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR002942\tF\ttRNA pseudouridine synthase A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6090\tTb927.10.6090\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\ttRNA pseudouridine synthase A, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6090\tTb927.10.6090\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\ttRNA pseudouridine synthase A, putative\t\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6090\tTb927.10.6090\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\ttRNA pseudouridine synthase A, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.610\tTb927.10.610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.610\tTb927.10.610\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6110\tTb927.10.6110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6110\tTb927.10.6110\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6120\tTb927.10.6120\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPeptidase M76 family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6130\tTb927.10.6130\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6140\tTb927.10.6140\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tphosphatidylinositolN- acetylglucosaminyltransferase subunit c, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6140\tTb927.10.6140\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tphosphatidylinositolN- acetylglucosaminyltransferase subunit c, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6140\tTb927.10.6140\t\tGO:0006506\tGO_REF:0000011\tISM\tInterPro:IPR009450\tP\tphosphatidylinositolN- acetylglucosaminyltransferase subunit c, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6140\tTb927.10.6140\t\tGO:0017176\tPMID:20382188\tIMP\t\tF\tphosphatidylinositolN- acetylglucosaminyltransferase subunit c, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6150\tTb927.10.6150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tneurobeachin/beige protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6150\tTb927.10.6150\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tneurobeachin/beige protein, putative\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6160\tTb927.10.6160\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tSec34-like family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6160\tTb927.10.6160\t\tGO:0005794\tPMID:27519801\tIDA\t\tC\tSec34-like family, putative\t\tmRNA\ttaxon:185431\t20161208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6170\tTb927.10.6170\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6180\tTb927.10.6180\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tFLA1-like protein\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6190\tALDH\t\tGO:0004362\tGO_REF:0000012\tISA\tUniProtKB:P51649\tF\taldehyde dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6190\tALDH\t\tGO:0009450\tGO_REF:0000012\tISA\tUniProtKB:P51649\tP\taldehyde dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.620\tTb927.10.620\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6200\tTb927.10.6200\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6210\tTb927.10.6210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTPR repeat, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6210\tTb927.10.6210\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tTPR repeat, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6220\tXRND\t\tGO:0004527\tGO_REF:0000011\tISM\tInterPro:IPR004859\tF\t5'-3' exoribonuclease D\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6220\tXRND\t\tGO:0005634\tPMID:17077271\tIDA\t\tC\t5'-3' exoribonuclease D\t\tmRNA\ttaxon:185431\t20120423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6220\tXRND\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\t5'-3' exoribonuclease D\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6220\tXRND\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t5'-3' exoribonuclease D\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6220\tXRND\t\tGO:0006396\tGO_REF:0000012\tISA\tUniProtKB:O35651\tP\t5'-3' exoribonuclease D\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6220\tXRND\t\tGO:0042162\tPMID:29385523\tIDA\t\tF\t5'-3' exoribonuclease D\t\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6230\tTb927.10.6230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMORN repeat containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6230\tTb927.10.6230\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tMORN repeat containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6240\tTbRHP\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tras-like small GTPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6240\tTbRHP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tras-like small GTPase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6250\tTb927.10.6250\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6250\tTb927.10.6250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6260\tTb927.10.6260\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6260\tTb927.10.6260\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6260\tTb927.10.6260\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6260\tTb927.10.6260\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6270\tTb927.10.6270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6270\tTb927.10.6270\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6270\tTb927.10.6270\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6280\tTb927.10.6280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tN-terminal glutamine amidase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6280\tTb927.10.6280\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tN-terminal glutamine amidase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6280\tTb927.10.6280\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tN-terminal glutamine amidase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6290\tTb927.10.6290\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6290\tTb927.10.6290\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6290\tTb927.10.6290\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6290\tTb927.10.6290\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6290\tTb927.10.6290\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.630\tTb927.10.630\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20161207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.630\tTb927.10.630\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6300\tMRPS5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ribosomal protein S5\tuS5m\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6300\tMRPS5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein S5\tuS5m\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6300\tMRPS5\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein S5\tuS5m\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6310\tMVP\t\tGO:0023057\tGO_REF:0000012\tISA\tUniProtKB:Q14764\tP\tmajor vault protein, putative\t\tmRNA\ttaxon:185431\t20140703\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6320\tTb927.10.6320\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tCBF/Mak21 family, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6330\tKKT1\t\tGO:0000776\tPMID:24582333\tIDA\t\tC\tkinetoplastid kinetochore protein 1\t\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6330\tKKT1\t\tGO:0000776\tPMID:30550896\tHDA\t\tC\tkinetoplastid kinetochore protein 1\t\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6330\tKKT1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid kinetochore protein 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6330\tKKT1\t\tGO:0007059\tPMID:24582333\tIMP\t\tP\tkinetoplastid kinetochore protein 1\t\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6340\tTb927.10.6340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6340\tTb927.10.6340\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6350\ttrypanin\t\tGO:0005929\tPMID:11864997\tIDA\t\tC\ttrypanin\tTLTF\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6350\ttrypanin\t\tGO:0060285\tPMID:11864997\tIMP\t\tP\ttrypanin\tTLTF\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0000910\tPMID:31540971\tIMP\t\tP\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20191114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0000910\tPMID:30171070\tIPI\tGeneDB:Tb927.11.15800\tP\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20181018\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0005515\tPMID:31540971\tIPI\tGeneDB:Tb927.11.15800\tF\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20191114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0032154\tPMID:31540971\tIDA\t\tC\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20191114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0034613\tPMID:31540971\tIMP\t\tP\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20191114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0120119\tPMID:31540971\tIDA\t\tC\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20191114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20181018\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6370\tTb927.10.6370\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00280\tF\t60S ribosomal proteins L37, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6370\tTb927.10.6370\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal proteins L37, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6370\tTb927.10.6370\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002674\tC\t60S ribosomal proteins L37, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6370\tTb927.10.6370\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00280\tP\t60S ribosomal proteins L37, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6370\tTb927.10.6370\t\tGO:0008270\tGO_REF:0000024\tISS\t\tF\t60S ribosomal proteins L37, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6380\tTb927.10.6380\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR001841\tF\tring finger containing protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.640\tPRMT5\t\tGO:0005737\tPMID:17601874\tIDA\t\tC\targinine N-methyltransferase, type II\t\tmRNA\ttaxon:185431\t20171010\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.640\tPRMT5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\targinine N-methyltransferase, type II\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.640\tPRMT5\t\tGO:0008469\tPMID:17601874\tIDA\t\tF\targinine N-methyltransferase, type II\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.640\tPRMT5\t\tGO:0016273\tPMID:17601874\tIDA\t\tF\targinine N-methyltransferase, type II\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.640\tPRMT5\t\tGO:0019918\tPMID:17601874\tIDA\t\tP\targinine N-methyltransferase, type II\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:P10809\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0030150\tGO_REF:0000012\tISA\tUniProtKB:P10809\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:P10809\tF\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6410\tMSH6\t\tGO:0005515\tPMID:32373549\tIPI\tGeneDB:Tb927.10.11020\tF\tDNA mismatch repair protein MSH6\t\tmRNA\ttaxon:185431\t20200522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6410\tMSH6\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA mismatch repair protein MSH6\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6410\tMSH6\t\tGO:0006298\tPMID:32373549\tIMP\t\tP\tDNA mismatch repair protein MSH6\t\tmRNA\ttaxon:185431\t20200522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6420\tTb927.10.6420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6430\tTb927.10.6430\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6440\tPMM\t\tGO:0004615\tPMID:22676716\tIDA\t\tF\tphosphomannomutase\t\tmRNA\ttaxon:185431\t20170220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6440\tPMM\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tphosphomannomutase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6440\tPMM\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphomannomutase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6440\tPMM\t\tGO:0019307\tPMID:22676716\tIDA\t\tP\tphosphomannomutase\t\tmRNA\ttaxon:185431\t20170220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6440\tPMM\t\tGO:0020015\tPMID:22676716\tIDA\t\tC\tphosphomannomutase\t\tmRNA\ttaxon:185431\t20170220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6440\tPMM\t\tGO:0020015\tPMID:18242729\tIDA\t\tC\tphosphomannomutase\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6440\tPMM\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tphosphomannomutase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6450\tTb927.10.6450\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\t2OG-Fe(II) oxygenase superfamily, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6460\tTb927.10.6460\t\tGO:0004722\tGO_REF:0000011\tISM\tPfam:PF00149\tF\tprotein phosphatase 2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6460\tTb927.10.6460\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tprotein phosphatase 2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6460\tTb927.10.6460\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:IPR006186\tF\tprotein phosphatase 2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6480\tTb927.10.6480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6490\tTb927.10.6490\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\tKIAA1430 homologue, putative\t\tmRNA\ttaxon:185431\t20161207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6490\tTb927.10.6490\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tKIAA1430 homologue, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.650\tCMF17\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tTAX-2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6500\tTb927.10.6500\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6500\tTb927.10.6500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6500\tTb927.10.6500\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6500\tTb927.10.6500\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR002422\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:P10809\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0030150\tGO_REF:0000012\tISA\tUniProtKB:P10809\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:P10809\tF\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6520\tTb927.10.6520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6530\tALG3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl alpha-1,3-mannosyltransferase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6530\tALG3\t\tGO:0005789\tPMID:20382188\tIMP\t\tC\tDolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl alpha-1,3-mannosyltransferase\t\tmRNA\ttaxon:185431\t20100907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6530\tALG3\t\tGO:0052925\tPMID:18263655\tIMP\t\tF\tDolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl alpha-1,3-mannosyltransferase\t\tmRNA\ttaxon:185431\t20191105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6540\tTb927.10.6540\t\tGO:0004722\tGO_REF:0000011\tISM\tPfam:PF00149\tF\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6540\tTb927.10.6540\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6540\tTb927.10.6540\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6540\tTb927.10.6540\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:IPR006186\tF\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6540\tTb927.10.6540\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6540\tTb927.10.6540\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6550\tTb927.10.6550\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region/Zinc-finger (CX5CX6HX5H) motif containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6550\tTb927.10.6550\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region/Zinc-finger (CX5CX6HX5H) motif containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6550\tTb927.10.6550\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region/Zinc-finger (CX5CX6HX5H) motif containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6560\tTb927.10.6560\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function DUF72, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6570\tTb927.10.6570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTPR repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6580\tTb927.10.6580\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6580\tTb927.10.6580\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6590\tTb927.10.6590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.660\tTb927.10.660\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t2-oxoisovalerate dehydrogenase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.660\tTb927.10.660\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P12694\tC\t2-oxoisovalerate dehydrogenase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.660\tTb927.10.660\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t2-oxoisovalerate dehydrogenase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.660\tTb927.10.660\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001017\tP\t2-oxoisovalerate dehydrogenase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.660\tTb927.10.660\t\tGO:0016624\tGO_REF:0000011\tISM\tInterPro:IPR001017\tF\t2-oxoisovalerate dehydrogenase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.660\tTb927.10.660\t\tGO:0047101\tGO_REF:0000012\tISA\tUniProtKB:P12694\tF\t2-oxoisovalerate dehydrogenase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6600\tKKT23\t\tGO:0000776\tPMID:31795916\tHDA\t\tC\tKinetoplastid kinetochore protein 23\t\tmRNA\ttaxon:185431\t20200316\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6600\tKKT23\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tKinetoplastid kinetochore protein 23\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6600\tKKT23\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tKinetoplastid kinetochore protein 23\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6600\tKKT23\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tKinetoplastid kinetochore protein 23\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6610\tJ22\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6610\tJ22\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6620\tTb927.10.6620\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6620\tTb927.10.6620\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6630\tDBP2A\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDEAD box protein 2A, putative\tHEL64\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6630\tDBP2A\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDEAD box protein 2A, putative\tHEL64\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6630\tDBP2A\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tDEAD box protein 2A, putative\tHEL64\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6630\tDBP2A\t\tGO:0005829\tPMID:10099016\tIDA\t\tC\tDEAD box protein 2A, putative\tHEL64\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6630\tDBP2A\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tDEAD box protein 2A, putative\tHEL64\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6630\tDBP2A\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDEAD box protein 2A, putative\tHEL64\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6640\tTb927.10.6640\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\ttransmembrane emp24 domain-containing protein\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6650\tTb927.10.6650\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tG10 protein homologue, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6670\tTb927.10.6670\t\tGO:0003777\tGO_REF:0000011\tISM\tInterPro:IPR001372\tF\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6670\tTb927.10.6670\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001372\tC\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6670\tTb927.10.6670\t\tGO:0007017\tGO_REF:0000011\tISM\tInterPro:IPR001372\tP\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6680\tTb927.10.6680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmember of the NOL1/NOP2/sun family of proteins\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6690\tPTP1\t\tGO:0004725\tPMID:17043136\tIDA\t\tF\tprotein tyrosine phosphatase 1\t\tmRNA\ttaxon:185431\t20180124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6690\tPTP1\t\tGO:0004725\tGO_REF:0000011\tISM\tInterPro:IPR000242\tF\tprotein tyrosine phosphatase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6690\tPTP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprotein tyrosine phosphatase 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6690\tPTP1\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:P26045\tP\tprotein tyrosine phosphatase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6690\tPTP1\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tprotein tyrosine phosphatase 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6690\tPTP1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tprotein tyrosine phosphatase 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.670\tTb927.10.670\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6700\tKKIP3\t\tGO:0000776\tPMID:28034897\tIDA\t\tC\tKinetochore interacting protein 3\t\tmRNA\ttaxon:185431\t20170202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6700\tKKIP3\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tKinetochore interacting protein 3\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6700\tKKIP3\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tKinetochore interacting protein 3\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6710\tTb927.10.6710\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6720\tTb927.10.6720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPlasma-membrane choline transporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6730\tTb927.10.6730\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tPlasma-membrane choline transporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6750\tTb927.10.6750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPlasma-membrane choline transporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6760\tTb927.10.6760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPlasma-membrane choline transporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6760\tTb927.10.6760\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tPlasma-membrane choline transporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6780\tVPS45\t\tGO:0000149\tGO_REF:0000012\tISA\tUniProtKB:O49048\tF\tvacuolar protein sorting-associated protein 45, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6780\tVPS45\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:O49048\tP\tvacuolar protein sorting-associated protein 45, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6790\tGCP3L\tNOT\tGO:0000930\tPMID:26224545\tIPI\tGeneDB:Tb927.3.910\tC\tGamma-tubulin complex component 3-like protein\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.680\tTb927.10.680\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tProtein of unknown function (DUF971), putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6800\tTb927.10.6800\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR006169\tF\tdevelopmentally regulated GTP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6800\tTb927.10.6800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdevelopmentally regulated GTP-binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6800\tTb927.10.6800\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q9Y295\tC\tdevelopmentally regulated GTP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6800\tTb927.10.6800\t\tGO:0009987\tGO_REF:0000012\tISA\tUniProtKB:Q9Y295\tP\tdevelopmentally regulated GTP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6810\tTb927.10.6810\t\tGO:0015949\tGO_REF:0000024\tISS\t\tP\tguanylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6810\tTb927.10.6810\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tguanylate kinase, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6810\tTb927.10.6810\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tguanylate kinase, putative\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0005515\tPMID:26721397\tIPI\tGeneDB:Tb927.9.13650|GeneDB:Tb927.9.13740|GeneDB:Tb927.9.13710|GeneDB:Tb927.9.13680|GeneDB:Tb927.9.10310\tF\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0020018\tPMID:26721397\tIDA\t\tC\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0030665\tPMID:26721397\tIDA\t\tC\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0032050\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6050\tF\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0033572\tPMID:26721397\tIMP\t\tP\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0034452\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0034464\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tC\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0034464\tPMID:26721397\tIPI\tGeneDB:Tb927.1.4140|GeneDB:Tb927.11.14470|GeneDB:Tb927.6.2020|GeneDB:Tb927.11.12450|GeneDB:Tb927.3.3640|GeneDB:Tb927.9.10670|GeneDB:Tb927.7.4515\tC\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0043014\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0043130\tPMID:26721397\tIDA\t\tF\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0048487\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\tNOT\tGO:0060271\tPMID:26721397\tIMP\t\tP\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\tNOT\tGO:0060285\tPMID:26721397\tIMP\t\tP\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6840\tTb927.10.6840\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6850\tMRPS18\t\tGO:0003723\tPMID:18951088\tIDA\t\tF\tMitochondrial ribosomal protein S18, putative\tbS18m\tmRNA\ttaxon:185431\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6850\tMRPS18\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ribosomal protein S18, putative\tbS18m\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6850\tMRPS18\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein S18, putative\tbS18m\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6850\tMRPS18\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein S18, putative\tbS18m\tmRNA\ttaxon:185431\t20141125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6850\tMRPS18\t\tGO:0043631\tPMID:18951088\tIDA\t\tP\tMitochondrial ribosomal protein S18, putative\tbS18m\tmRNA\ttaxon:185431\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6850\tMRPS18\t\tGO:0048255\tPMID:18951088\tIDA\t\tP\tMitochondrial ribosomal protein S18, putative\tbS18m\tmRNA\ttaxon:185431\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6860\tENDOV\t\tGO:0004521\tPMID:28819113\tIDA\t\tF\tendonuclease v\t\tmRNA\ttaxon:185431\t20170922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6870\tTb927.10.6870\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tshort-chain dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6870\tTb927.10.6870\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002198\tP\tshort-chain dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6870\tTb927.10.6870\t\tGO:0016491\tGO_REF:0000011\tISM\tInterPro:IPR002198\tF\tshort-chain dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6880\tGAP\t\tGO:0004365\tGO_REF:0000011\tISM\tInterPro:IPR000173\tF\tglyceraldehyde 3-phosphate dehydrogenase, cytosolic\t\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6880\tGAP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglyceraldehyde 3-phosphate dehydrogenase, cytosolic\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6880\tGAP\t\tGO:0005829\tPMID:3830153\tTAS\t\tC\tglyceraldehyde 3-phosphate dehydrogenase, cytosolic\t\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6880\tGAP\t\tGO:0006096\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01534\tP\tglyceraldehyde 3-phosphate dehydrogenase, cytosolic\t\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6890\tTb927.10.6890\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6890\tTb927.10.6890\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6890\tTb927.10.6890\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.690\tTb927.10.690\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.690\tTb927.10.690\t\tGO:0006897\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.690\tTb927.10.690\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.690\tTb927.10.690\t\tGO:0018345\tPMID:21193548\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6900\tJGT\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tbase J-associated glucosyltransferase\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6900\tJGT\t\tGO:0006304\tPMID:25064607\tIDA\t\tP\tbase J-associated glucosyltransferase\t\tmRNA\ttaxon:185431\t20160914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6900\tJGT\t\tGO:0046527\tPMID:24891501\tIMP\t\tF\tbase J-associated glucosyltransferase\t\tmRNA\ttaxon:185431\t20160914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6910\tSMT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSterol methyltransferase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6910\tSMT\t\tGO:0005783\tPMID:22964455\tIDA\t\tC\tSterol methyltransferase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6920\tTb927.10.6920\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6930\tTb927.10.6930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCullin family/Cullin protein neddylation domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6930\tTb927.10.6930\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCullin family/Cullin protein neddylation domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6930\tTb927.10.6930\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCullin family/Cullin protein neddylation domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6940\tTb927.10.6940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDipeptidyl-peptidase 8-like, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6940\tTb927.10.6940\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDipeptidyl-peptidase 8-like, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6950\tSMT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsterol 24-c-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6950\tSMT\t\tGO:0005783\tPMID:22964455\tIDA\t\tC\tsterol 24-c-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20170727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6970\tTb927.10.6970\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tserine peptidase, Clan SC, Family S9B\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6970\tTb927.10.6970\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tserine peptidase, Clan SC, Family S9B\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6980\tTb927.10.6980\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tcaltractin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6980\tTb927.10.6980\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcaltractin, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6990\tTb927.10.6990\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6990\tTb927.10.6990\t\tGO:0020018\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6990\tTb927.10.6990\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.70\tTb927.10.70\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tretrotransposon hot spot (RHS), putative, (fragment)\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.700\tTb927.10.700\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7000\tTZP37\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7000\tTZP37\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7020\tAP\t\tGO:0003993\tGO_REF:0000011\tISM\tInterPro:IPR000560\tF\tacid phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7020\tAP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tacid phosphatase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7020\tAP\t\tGO:0003993\tGO_REF:0000011\tISM\tInterPro:IPR000560\tF\tacid phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7020\tAP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tacid phosphatase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7030\tTb927.10.7030\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7030\tTb927.10.7030\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7040\tTb927.10.7040\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0005634\tPMID:22941664\tIDA\t\tC\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20170712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0006333\tGO_REF:0000012\tISA\tUniProtKB:Q9D0N7\tP\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0006334\tGO_REF:0000002\tISS\t\tP\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0031497\tGO_REF:0000002\tISS\t\tP\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0042393\tGO_REF:0000002\tISS\t\tF\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0051082\tGO_REF:0000002\tISS\t\tF\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7060\tNUP96\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP96\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7060\tNUP96\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP96\t\tmRNA\ttaxon:185431\t20170212\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7060\tNUP96\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP96\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7060\tNUP96\t\tGO:0044612\tPMID:26891179\tIPI\tGeneDB:Tb927.4.2880\tC\tNucleoporin NUP96\t\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7070\tSNAP3\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tsmall nuclear RNA-activating protein\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7070\tSNAP3\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tsmall nuclear RNA-activating protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7080\tTb927.10.7080\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7080\tTb927.10.7080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7080\tTb927.10.7080\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7080\tTb927.10.7080\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0005739\tPMID:9763289\tIDA\t\tC\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0005743\tPMID:18021773\tIDA\t\tC\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20170724\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0008199\tPMID:20056101\tIDA\t\tF\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20100201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0009916\tPMID:12633849\tIDA\t\tF\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20100201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0016491\tPMID:12188215\tTAS\t\tF\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0055114\tPMID:12188215\tTAS\t\tP\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.710\tTb927.10.710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.710\tTb927.10.710\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7100\tTb927.10.7100\t\tGO:0004768\tGO_REF:0000011\tISM\tPfam:PF00487\tF\tdelta-4 fatty acid desaturase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7100\tTb927.10.7100\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tdelta-4 fatty acid desaturase\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7100\tTb927.10.7100\t\tGO:0006633\tGO_REF:0000011\tISM\tPfam:PF00487\tP\tdelta-4 fatty acid desaturase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7100\tTb927.10.7100\t\tGO:0016491\tGO_REF:0000011\tISM\tInterPro:IPR005804\tF\tdelta-4 fatty acid desaturase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7110\tINO1\t\tGO:0004512\tPMID:20382188\tEXP\t\tF\tMyo-inositol 1-phosphate synthase\t\tmRNA\ttaxon:185431\t20100812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7110\tINO1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMyo-inositol 1-phosphate synthase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7110\tINO1\t\tGO:0006506\tPMID:16246027\tIMP\t\tP\tMyo-inositol 1-phosphate synthase\t\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7140\tMBAP2\t\tGO:0003993\tGO_REF:0000012\tISA\tUniProtKB:P11117\tF\tmembrane-bound acid phosphatase 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7140\tMBAP2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmembrane-bound acid phosphatase 2\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7140\tMBAP2\t\tGO:0005765\tGO_REF:0000012\tISA\tUniProtKB:P11117\tC\tmembrane-bound acid phosphatase 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7140\tMBAP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmembrane-bound acid phosphatase 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7150\tTb927.10.7150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7160\tTb927.10.7160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprocyclin-associated gene 1 (PAG1) protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7170\tTb927.10.7170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7180\tCRAM\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcysteine-rich, acidic integral membrane protein precursor\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7180\tCRAM\t\tGO:0016021\tPMID:1697030\tTAS\t\tC\tcysteine-rich, acidic integral membrane protein precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7180\tCRAM\t\tGO:0020016\tPMID:1697030\tTAS\t\tC\tcysteine-rich, acidic integral membrane protein precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7190\tTb927.10.7190\t\tGO:0004045\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00256\tF\tD-tyrosyl-tRNA deacylase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7190\tTb927.10.7190\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:IPR003732\tC\tD-tyrosyl-tRNA deacylase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7190\tTb927.10.7190\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tD-tyrosyl-tRNA deacylase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7190\tTb927.10.7190\t\tGO:0019478\tGO_REF:0000011\tISM\tInterPro:IPR003732\tP\tD-tyrosyl-tRNA deacylase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.720\tFAZ24\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tFlagellum attachment zone protein 24\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.720\tFAZ24\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 24\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.720\tFAZ24\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 24\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.720\tFAZ24\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tFlagellum attachment zone protein 24\t\tmRNA\ttaxon:185431\t20190108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7200\tTb927.10.7200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTPR repeat, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7220\tTb927.10.7220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7230\tFLAM1\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tFlagellar Member 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7230\tFLAM1\t\tGO:0031514\tPMID:24741115\tIDA\t\tC\tFlagellar Member 1\t\tmRNA\ttaxon:185431\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7240\tkkt14\t\tGO:0000776\tPMID:24582333\tIDA\t\tC\tkinetoplastid kinetochore protein 14\t\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7240\tkkt14\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tkinetoplastid kinetochore protein 14\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7240\tkkt14\t\tGO:0007059\tPMID:24582333\tIMP\t\tP\tkinetoplastid kinetochore protein 14\t\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7250\tTb927.10.7250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7250\tTb927.10.7250\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7270\tTb927.10.7270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7270\tTb927.10.7270\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7270\tTb927.10.7270\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7280\tTb927.10.7280\t\tGO:0000375\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tP\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7280\tTb927.10.7280\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tF\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7280\tTb927.10.7280\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7280\tTb927.10.7280\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7280\tTb927.10.7280\t\tGO:0005681\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7280\tTb927.10.7280\t\tGO:0008380\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tP\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7290\tFLAM2\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tFlagellar Member 2\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7290\tFLAM2\t\tGO:0031514\tPMID:24741115\tIDA\t\tC\tFlagellar Member 2\t\tmRNA\ttaxon:185431\t20150817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.730\tTb927.10.730\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATP synthase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.730\tTb927.10.730\t\tGO:0015986\tGO_REF:0000011\tISM\tPfam:PF03224\tP\tATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.730\tTb927.10.730\t\tGO:0016469\tGO_REF:0000011\tISM\tPfam:PF03224\tC\tATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.730\tTb927.10.730\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tATP synthase, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.730\tTb927.10.730\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tATP synthase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.730\tTb927.10.730\t\tGO:0046961\tGO_REF:0000011\tISM\tPfam:PF03224\tF\tATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7310\tTUT3\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tterminal uridylyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7320\tTb927.10.7320\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7320\tTb927.10.7320\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7320\tTb927.10.7320\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7330\tTb927.10.7330\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001976\tF\t40S ribosomal protein S24E, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7330\tTb927.10.7330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S24E, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7330\tTb927.10.7330\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001976\tC\t40S ribosomal protein S24E, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7330\tTb927.10.7330\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001976\tP\t40S ribosomal protein S24E, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7330\tTb927.10.7330\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\t40S ribosomal protein S24E, putative\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7340\tTb927.10.7340\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001976\tF\t40S ribosomal protein S24E, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7340\tTb927.10.7340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S24E, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7340\tTb927.10.7340\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001976\tC\t40S ribosomal protein S24E, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7340\tTb927.10.7340\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001976\tP\t40S ribosomal protein S24E, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7350\tTb927.10.7350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7350\tTb927.10.7350\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003439\tF\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0009898\tGO_REF:0000011\tISM\tPfam:PF00005\tC\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0042626\tGO_REF:0000011\tISM\tPfam:PF00005\tF\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7370\tTb927.10.7370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7380\tTb927.10.7380\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7380\tTb927.10.7380\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7390\tTb927.10.7390\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tPHF5-like protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0000278\tGO_REF:0000012\tISA\tUniProtKB:Q8CG47\tP\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0000796\tGO_REF:0000012\tISA\tUniProtKB:Q8CG47\tC\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0005524\tGO_REF:0000024\tISS\t\tF\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0005634\tGO_REF:0000024\tISS\t\tC\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0007059\tGO_REF:0000024\tISS\t\tP\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7400\tTb927.10.7400\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpredicted zinc finger protein\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7400\tTb927.10.7400\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tpredicted zinc finger protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7410\tTb927.10.7410\t\tGO:0005739\tPMID:18364711\tISO\tGeneDB:LmjF.36.2950\tC\tsuccinyl-CoA ligase [GDP-forming] beta-chain, putative\t\tmRNA\ttaxon:185431\t20100826\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7410\tTb927.10.7410\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tsuccinyl-CoA ligase [GDP-forming] beta-chain, putative\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7420\tBDF2\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tbromodomain factor 2 protein, putative\t\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7420\tBDF2\t\tGO:0005634\tPMID:19136002\tISO\tGeneDB:TcCLB.506553.20\tC\tbromodomain factor 2 protein, putative\t\tmRNA\ttaxon:185431\t20110502\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7420\tBDF2\t\tGO:0006338\tPMID:19136002\tISO\tGeneDB:TcCLB.506553.20\tP\tbromodomain factor 2 protein, putative\t\tmRNA\ttaxon:185431\t20110502\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7420\tBDF2\t\tGO:0016570\tPMID:19136002\tISO\tGeneDB:TcCLB.506553.20\tP\tbromodomain factor 2 protein, putative\t\tmRNA\ttaxon:185431\t20110502\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7420\tBDF2\t\tGO:0042393\tPMID:19136002\tISO\tGeneDB:TcCLB.506553.20\tF\tbromodomain factor 2 protein, putative\t\tmRNA\ttaxon:185431\t20110502\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7430\tTb927.10.7430\t\tGO:0005525\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00650\tF\tGTP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7430\tTb927.10.7430\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGTP-binding protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7440\tMTR4\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase MTR4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7440\tMTR4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent RNA helicase MTR4\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7440\tMTR4\t\tGO:0005634\tPMID:17940093\tIDA\t\tC\tATP-dependent RNA helicase MTR4\t\tmRNA\ttaxon:185431\t20090520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7440\tMTR4\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tATP-dependent RNA helicase MTR4\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7440\tMTR4\t\tGO:0006364\tPMID:17940093\tIDA\t\tP\tATP-dependent RNA helicase MTR4\t\tmRNA\ttaxon:185431\t20100421\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7440\tMTR4\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase MTR4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7450\tRRP41A\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\texosome complex exonuclease RRP41A\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7450\tRRP41A\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\texosome complex exonuclease RRP41A\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7450\tRRP41A\t\tGO:0006364\tPMID:11447124\tIMP\t\tP\texosome complex exonuclease RRP41A\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7450\tRRP41A\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\texosome complex exonuclease RRP41A\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7450\tRRP41A\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\texosome complex exonuclease RRP41A\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7460\tTb927.10.7460\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7470\tRBP15\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7470\tRBP15\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7470\tRBP15\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7470\tRBP15\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7470\tRBP15\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7470\tRBP15\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7490\tCUL2\t\tGO:0000278\tGO_REF:0000011\tISM\tInterPro:IPR001373\tP\tcullin 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7490\tCUL2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tcullin 2, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7490\tCUL2\t\tGO:0006511\tPMID:27956554\tIPI\tGeneDB:Tb927.4.2540\tP\tcullin 2, putative\t\tmRNA\ttaxon:185431\t20170104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7490\tCUL2\t\tGO:0031461\tPMID:27956554\tIPI\tGeneDB:Tb927.4.2540\tC\tcullin 2, putative\t\tmRNA\ttaxon:185431\t20170104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.750\tTb927.10.750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7500\tNOP1\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR000692\tF\tfibrillarin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7500\tNOP1\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P35549\tC\tfibrillarin\t\tmRNA\ttaxon:185431\t20090508\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7500\tNOP1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tfibrillarin\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7500\tNOP1\t\tGO:0006364\tPMID:17981991\tIMP\t\tP\tfibrillarin\t\tmRNA\ttaxon:185431\t20090508\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7500\tNOP1\t\tGO:0030562\tPMID:17981991\tIMP\t\tF\tfibrillarin\t\tmRNA\ttaxon:185431\t20090507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7500\tNOP1\t\tGO:0031428\tPMID:17981991\tIMP\t\tC\tfibrillarin\t\tmRNA\ttaxon:185431\t20090508\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7510\tTb927.10.7510\t\tGO:0003682\tGO_REF:0000011\tISM\tInterPro:IPR000408\tF\tchromatin binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7510\tTb927.10.7510\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchromatin binding protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7510\tTb927.10.7510\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tchromatin binding protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7510\tTb927.10.7510\t\tGO:0008536\tGO_REF:0000011\tISM\tInterPro:IPR000408\tF\tchromatin binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7510\tTb927.10.7510\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000408\tP\tchromatin binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7520\tFPGS\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tfolylpolyglutamate synthase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7520\tFPGS\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tfolylpolyglutamate synthase, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7530\tTb927.10.7530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7530\tTb927.10.7530\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7530\tTb927.10.7530\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7540\tTb927.10.7540\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVRR-NUC domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7540\tTb927.10.7540\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tVRR-NUC domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7550\tTb927.10.7550\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7550\tTb927.10.7550\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7560\tTb927.10.7560\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tmethyltransferase domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7560\tTb927.10.7560\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmethyltransferase domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0000002\tPMID:23125353\tIMP\t\tP\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0000910\tPMID:23125353\tIMP\t\tP\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0004738\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01349\tF\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0004742\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01349\tF\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0005743\tPMID:23125353\tIDA\t\tC\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0005759\tPMID:23125353\tIDA\t\tC\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0005967\tGO_REF:0000012\tISA\tUniProtKB:P08461\tC\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0006086\tGO_REF:0000024\tISS\t\tP\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7580\tXpo-5\t\tGO:0005634\tPMID:31392978\tIDA\t\tC\tExportin-5, putative\t\tmRNA\ttaxon:185431\t20191007\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7590\tTb927.10.7590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7590\tTb927.10.7590\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7590\tTb927.10.7590\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.760\tTb927.10.760\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7600\tPOC5\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tCentrosomal protein POC5, putative\t\tmRNA\ttaxon:185431\t20170105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7610\tTb927.10.7610\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7610\tTb927.10.7610\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7610\tTb927.10.7610\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0000278\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01241\tP\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0004222\tGO_REF:0000011\tISM\tInterPro:IPR000642\tF\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:YME1_YEAST\tC\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0005743\tPMID:32437726\tIDA\t\tC\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20220106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0006508\tGO_REF:0000024\tISS\tGeneDB:PFL1925w\tP\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0051082\tGO_REF:0000002\tISS\t\tF\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7630\tKAP104\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tImportin subunit beta-2, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7670\tTb927.10.7670\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tProtein of unknown function (DUF2962), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7680\tTb927.10.7680\t\tGO:0005634\tPMID:28727848\tHDA\t\tC\tGTPase activating protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7680\tTb927.10.7680\t\tGO:0005634\tPMID:29781112\tIDA\t\tC\tGTPase activating protein, putative\t\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7680\tTb927.10.7680\t\tGO:0005643\tPMID:28727848\tIDA\t\tC\tGTPase activating protein, putative\t\tmRNA\ttaxon:185431\t20210322\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7690\tCMF4\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\trib72 protein- like protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7690\tCMF4\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\trib72 protein- like protein\t\tmRNA\ttaxon:185431\t20090428\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.770\tTb927.10.770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRF-1 domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.770\tTb927.10.770\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tRF-1 domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003439\tF\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0009898\tGO_REF:0000011\tISM\tPfam:PF00005\tC\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0042626\tGO_REF:0000011\tISM\tPfam:PF00005\tF\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0090556\tGO_REF:0000024\tISO\tGeneDB:LmjF.06.0090\tF\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20160125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7710\tTb927.10.7710\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF01201\tF\t40S ribosomal protein S8, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7710\tTb927.10.7710\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S8, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7710\tTb927.10.7710\t\tGO:0005840\tGO_REF:0000011\tISM\tPfam:PF01201\tC\t40S ribosomal protein S8, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7710\tTb927.10.7710\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF01201\tP\t40S ribosomal protein S8, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7720\tTb927.10.7720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7720\tTb927.10.7720\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7720\tTb927.10.7720\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7730\tTb927.10.7730\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4496), putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7740\tSEC23.2\t\tGO:0005515\tPMID:19759175\tIPI\tGeneDB:Tb927.3.1210\tF\tprotein transport protein SEC23\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7740\tSEC23.2\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tprotein transport protein SEC23\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7740\tSEC23.2\t\tGO:0006888\tPMID:19759175\tIMP\t\tP\tprotein transport protein SEC23\t\tmRNA\ttaxon:185431\t20091230\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7740\tSEC23.2\t\tGO:0030127\tPMID:19759175\tIMP\t\tC\tprotein transport protein SEC23\t\tmRNA\ttaxon:185431\t20091230\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7740\tSEC23.2\t\tGO:0070971\tPMID:19759175\tIDA\t\tC\tprotein transport protein SEC23\t\tmRNA\ttaxon:185431\t20170714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7750\tTb927.10.7750\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7750\tTb927.10.7750\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7750\tTb927.10.7750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7760\tTb927.10.7760\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7770\tTb927.10.7770\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7780\tKFR1\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tMitogen-activated protein kinase KFR1\tMAPK1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7780\tKFR1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tMitogen-activated protein kinase KFR1\tMAPK1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7780\tKFR1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tMitogen-activated protein kinase KFR1\tMAPK1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7790\tUFD1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tubiquitin fusion degradation protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7790\tUFD1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin fusion degradation protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7790\tUFD1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tubiquitin fusion degradation protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.780\tTb927.10.780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRing finger domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.780\tTb927.10.780\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR001841\tF\tRing finger domain containing protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.780\tTb927.10.780\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tRing finger domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.780\tTb927.10.780\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tRing finger domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7800\tTb927.10.7800\t\tGO:0007165\tGO_REF:0000012\tISA\tUniProtKB:CSN2_DROME\tP\tcop9 signalosome complex subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7800\tTb927.10.7800\t\tGO:0008180\tGO_REF:0000012\tISA\tUniProtKB:Q8W207\tC\tcop9 signalosome complex subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7810\tESF1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tPre-rRNA-processing protein ESF1, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7810\tESF1\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tPre-rRNA-processing protein ESF1, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7820\tTb927.10.7820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7840\tTb927.10.7840\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7840\tTb927.10.7840\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7890\tTb927.10.7890\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.790\tTb927.10.790\t\tGO:0005484\tGO_REF:0000012\tISA\tUniProtKB:Q7JYX5_DROME\tF\tvesicle-associated membrane protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.790\tTb927.10.790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tvesicle-associated membrane protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.790\tTb927.10.790\t\tGO:0016021\tGO_REF:0000024\tISS\t\tC\tvesicle-associated membrane protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.790\tTb927.10.790\t\tGO:0016079\tGO_REF:0000012\tISA\tUniProtKB:Q7JYX5_DROME\tP\tvesicle-associated membrane protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7900\tTb927.10.7900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7910\tMERS3\t\tGO:0003723\tPMID:30976048\tIDA\t\tF\tRNA binding protein 7910\tRBP7910\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7910\tMERS3\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tRNA binding protein 7910\tRBP7910\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7910\tMERS3\t\tGO:0005739\tPMID:26991453\tIDA\t\tC\tRNA binding protein 7910\tRBP7910\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7910\tMERS3\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tRNA binding protein 7910\tRBP7910\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7910\tMERS3\t\tGO:0080156\tPMID:26991453\tIMP\t\tP\tRNA binding protein 7910\tRBP7910\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7930\tPGAM\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7930\tPGAM\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7930\tPGAM\t\tGO:0005829\tPMID:11864997\tTAS\t\tC\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase\t\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7930\tPGAM\t\tGO:0006094\tPMID:10691985\tTAS\t\tP\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase\t\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7930\tPGAM\t\tGO:0006096\tPMID:10691985\tTAS\t\tP\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase\t\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7930\tPGAM\t\tGO:0046537\tPMID:10691985\tTAS\t\tF\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase\t\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7930\tPGAM\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7940\tTb927.10.7940\t\tGO:0001510\tGO_REF:0000011\tISM\tPfam:PF01728\tP\tmethyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7940\tTb927.10.7940\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tmethyltransferase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7940\tTb927.10.7940\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tmethyltransferase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7940\tTb927.10.7940\t\tGO:0008649\tGO_REF:0000011\tISM\tPfam:PF01728\tF\tmethyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7980\tTb927.10.7980\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7980\tTb927.10.7980\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7990\tTb927.10.7990\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATPase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7990\tTb927.10.7990\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tATPase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.800\tTb927.10.800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.800\tTb927.10.800\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.800\tTb927.10.800\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8010\tTb927.10.8010\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8010\tTb927.10.8010\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8010\tTb927.10.8010\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8020\tPOP\t\tGO:0004252\tGO_REF:0000002\tISS\t\tF\tserine peptidase clan SC, family S9A, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8020\tPOP\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:Q9QUR6\tC\tserine peptidase clan SC, family S9A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8020\tPOP\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q9QUR6\tC\tserine peptidase clan SC, family S9A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8020\tPOP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tserine peptidase clan SC, family S9A, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8020\tPOP\t\tGO:0006508\tGO_REF:0000012\tISA\tUniProtKB:Q9QUR6\tP\tserine peptidase clan SC, family S9A, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8020\tPOP\t\tGO:0070012\tPMID:20188209\tIDA\t\tF\tserine peptidase clan SC, family S9A, putative\t\tmRNA\ttaxon:185431\t20100618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8030\tATP5\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ATP synthase subunit 5\tOSCP\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8030\tATP5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ATP synthase subunit 5\tOSCP\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8030\tATP5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ATP synthase subunit 5\tOSCP\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8030\tATP5\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit 5\tOSCP\tmRNA\ttaxon:185431\t20170525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0005794\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0005802\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0005905\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0006886\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tP\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tP\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0030130\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20141125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8050\tTb927.10.8050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8050\tTb927.10.8050\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8050\tTb927.10.8050\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8060\tSET8\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 8\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8060\tSET8\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSET domain protein 8\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8060\tSET8\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSET domain protein 8\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8070\tZapE2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tATPase, putative\tAFG1\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8070\tZapE2\t\tGO:0016887\tGO_REF:0000011\tISM\tInterPro:IPR005654\tF\tATPase, putative\tAFG1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8070\tZapE2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tATPase, putative\tAFG1\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8080\tTb927.10.8080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUncharacterized conserved protein (DUF2042), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8090\tTb927.10.8090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8090\tTb927.10.8090\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8090\tTb927.10.8090\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8090\tTb927.10.8090\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8090\tTb927.10.8090\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.810\tTb927.10.810\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.810\tTb927.10.810\t\tGO:0005739\tPMID:17646387\tISM\t\tC\tPentatricopeptide repeat protein (PPR), putative\t\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8100\tSET26\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tSET domain protein 26\t\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8100\tSET26\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSET domain protein 26\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8100\tSET26\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 26\t\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8110\tTb927.10.8110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF2453), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8110\tTb927.10.8110\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF2453), putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8110\tTb927.10.8110\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tProtein of unknown function (DUF2453), putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8120\tTb927.10.8120\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA ligase/AAA domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8120\tTb927.10.8120\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tRNA ligase/AAA domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8120\tTb927.10.8120\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA ligase/AAA domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8120\tTb927.10.8120\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tRNA ligase/AAA domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8130\tTZP43\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8140\tTb927.10.8140\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tEVE domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8140\tTb927.10.8140\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tEVE domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8150\tBDF1\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tBromodomain factor 1\tBF1\tmRNA\ttaxon:185431\t20220207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8150\tBDF1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tBromodomain factor 1\tBF1\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8150\tBDF1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tBromodomain factor 1\tBF1\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8150\tBDF1\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506247.80\tC\tBromodomain factor 1\tBF1\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8150\tBDF1\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tBromodomain factor 1\tBF1\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8160\tTb927.10.8160\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8160\tTb927.10.8160\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8170\tNUP144\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP144\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8170\tNUP144\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP144\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8170\tNUP144\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP144\t\tmRNA\ttaxon:185431\t20170212\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8170\tNUP144\t\tGO:0044611\tPMID:26891179\tIPI\tGeneDB:Tb927.11.9780\tC\tNucleoporin NUP144\t\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8180\tTb927.10.8180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8180\tTb927.10.8180\t\tGO:1990900\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8190\tTb927.10.8190\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tT-complex protein 1, theta subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8190\tTb927.10.8190\t\tGO:0005832\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tC\tT-complex protein 1, theta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8190\tTb927.10.8190\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, theta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8190\tTb927.10.8190\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, theta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8190\tTb927.10.8190\t\tGO:0051726\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, theta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.820\tTb927.10.820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.820\tTb927.10.820\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8200\tTb927.10.8200\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRibosomal protein L1p/L10e family, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8210\tKREPA2\t\tGO:0005739\tPMID:11564867\tIDA\t\tC\tKREPA2\tMP63\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8210\tKREPA2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tKREPA2\tMP63\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8210\tKREPA2\t\tGO:0016556\tPMID:11564867\tIDA\t\tP\tKREPA2\tMP63\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8210\tKREPA2\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPA2\tMP63\tmRNA\ttaxon:185431\t20100205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8210\tKREPA2\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tKREPA2\tMP63\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8210\tKREPA2\t\tGO:0045293\tPMID:11564867\tIDA\t\tC\tKREPA2\tMP63\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8220\tTb927.10.8220\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8220\tTb927.10.8220\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8220\tTb927.10.8220\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8220\tTb927.10.8220\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8230\tPDI2\t\tGO:0003756\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01126\tF\tbloodstream- specific protein 2 precursor\tBS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8230\tPDI2\t\tGO:0005737\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01068\tC\tbloodstream- specific protein 2 precursor\tBS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8230\tPDI2\t\tGO:0006457\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01126\tP\tbloodstream- specific protein 2 precursor\tBS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8240\tCIF4\t\tGO:0000910\tPMID:31540971\tIMP\t\tP\tCytokinesis initiation factor 4\t\tmRNA\ttaxon:185431\t20191023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8240\tCIF4\t\tGO:0005515\tPMID:31540971\tIPI\tGeneDB:Tb927.11.15800|GeneDB:Tb927.10.6360\tF\tCytokinesis initiation factor 4\t\tmRNA\ttaxon:185431\t20191023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8240\tCIF4\t\tGO:0032154\tPMID:31540971\tIDA\t\tC\tCytokinesis initiation factor 4\t\tmRNA\ttaxon:185431\t20191023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8240\tCIF4\t\tGO:0034613\tPMID:31540971\tIMP\t\tP\tCytokinesis initiation factor 4\t\tmRNA\ttaxon:185431\t20191023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8240\tCIF4\t\tGO:0036089\tPMID:31540971\tIMP\t\tP\tCytokinesis initiation factor 4\t\tmRNA\ttaxon:185431\t20191023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8240\tCIF4\t\tGO:0120119\tPMID:29781112\tIDA\t\tC\tCytokinesis initiation factor 4\t\tmRNA\ttaxon:185431\t20191023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8240\tCIF4\t\tGO:0120119\tPMID:31540971\tIDA\t\tC\tCytokinesis initiation factor 4\t\tmRNA\ttaxon:185431\t20191023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8250\tTb927.10.8250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8250\tTb927.10.8250\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8260\tTb927.10.8260\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8270\tEIF3C-2\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8270\tEIF3C-2\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LmjF.36.6980\tC\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8270\tEIF3C-2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8270\tEIF3C-2\t\tGO:0005852\tGO_REF:0000024\tISO\tGeneDB:LmjF.36.6980\tC\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8270\tEIF3C-2\t\tGO:0006413\tGO_REF:0000011\tISM\tPfam:PF05470\tP\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8280\tRBP14B\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tU1A small nuclear ribonucleoprotein\tU1A\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8290\tEIF3C-1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8290\tEIF3C-1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8290\tEIF3C-1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LmjF.36.6980\tC\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8290\tEIF3C-1\t\tGO:0005852\tGO_REF:0000024\tISO\tGeneDB:LmjF.36.6980\tC\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8290\tEIF3C-1\t\tGO:0006413\tGO_REF:0000011\tISM\tPfam:PF05470\tP\teukaryotic translation initiation factor 3 subunit c\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.830\tADKB\t\tGO:0004017\tPMID:16567051\tISO\tGeneDB:TcCLB.503479.30\tF\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.830\tADKB\t\tGO:0005524\tPMID:16567051\tISO\tGeneDB:TcCLB.503479.30\tF\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.830\tADKB\t\tGO:0005829\tPMID:16567051\tISO\tGeneDB:TcCLB.503479.30\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.830\tADKB\t\tGO:0005929\tPMID:15657034\tIDA\t\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20170616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.830\tADKB\t\tGO:0020015\tPMID:16567051\tISO\tGeneDB:TcCLB.503479.30\tC\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8300\tRBP14A\t\tGO:0000365\tPMID:20592024\tIMP\t\tP\tU1A small nuclear ribonucleoprotein\tU1A\tmRNA\ttaxon:185431\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8300\tRBP14A\t\tGO:0005634\tPMID:19429779\tEXP\t\tC\tU1A small nuclear ribonucleoprotein\tU1A\tmRNA\ttaxon:185431\t20090514\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8300\tRBP14A\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tU1A small nuclear ribonucleoprotein\tU1A\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8300\tRBP14A\t\tGO:0005685\tPMID:15863726\tIPI\tGeneDB:Tb927.8.4830\tC\tU1A small nuclear ribonucleoprotein\tU1A\tmRNA\ttaxon:185431\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8300\tRBP14A\t\tGO:0045292\tPMID:20592024\tIMP\t\tP\tU1A small nuclear ribonucleoprotein\tU1A\tmRNA\ttaxon:185431\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0004402\tGO_REF:0000012\tISA\tUniProtKB:Q99MK2\tF\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0005634\tPMID:18179414\tNAS\t\tC\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20170426\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0010485\tPMID:18179414\tIDA\t\tF\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20170426\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0016573\tGO_REF:0000012\tISA\tUniProtKB:Q8CHK4\tP\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8320\tCOXIX\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcytochrome oxidase subunit IX, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8320\tCOXIX\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcytochrome oxidase subunit IX, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8360\tPARN2\t\tGO:0004518\tPMID:21743004\tIDA\t\tF\tPoly(A)-specific ribonuclease PARN-2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8360\tPARN2\t\tGO:0005634\tPMID:21743004\tIC\t\tC\tPoly(A)-specific ribonuclease PARN-2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8370\tmt-SAF29\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tMitoribosomal SSU assembly factor 29\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8370\tmt-SAF29\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tMitoribosomal SSU assembly factor 29\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8380\tTb927.10.8380\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.840\tFAZ6\t\tGO:0005515\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tFlagellum attachment zone protein 6\t\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.840\tFAZ6\t\tGO:0005515\tPMID:25736289\tIPI\tGeneDB:Tb927.4.3740\tF\tFlagellum attachment zone protein 6\t\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.840\tFAZ6\t\tGO:0005856\tPMID:25736289\tIDA\t\tC\tFlagellum attachment zone protein 6\t\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.840\tFAZ6\t\tGO:0005929\tPMID:25736289|PMID:27226595\tIDA\t\tC\tFlagellum attachment zone protein 6\t\tmRNA\ttaxon:185431\t20160603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.840\tFAZ6\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 6\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.840\tFAZ6\t\tGO:0120119\tPMID:25972344\tIDA\t\tC\tFlagellum attachment zone protein 6\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.840\tFAZ6\t\tGO:0120119\tPMID:25736289\tIDA\t\tC\tFlagellum attachment zone protein 6\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8400\tTb927.10.8400\t\tGO:0005537\tGO_REF:0000012\tISA\tUniProtKB:Q9DBH5\tF\tlegume-like lectin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8400\tTb927.10.8400\t\tGO:0009306\tGO_REF:0000012\tISA\tUniProtKB:Q9DBH5\tP\tlegume-like lectin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8400\tTb927.10.8400\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR005052\tC\tlegume-like lectin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8410\tTb927.10.8410\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8420\tTOR1\t\tGO:0005634\tPMID:18796613\tIDA\t\tC\tTarget of rapamycin kinase 1\t\tmRNA\ttaxon:185431\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8420\tTOR1\t\tGO:0008361\tPMID:18796613\tIMP\t\tP\tTarget of rapamycin kinase 1\t\tmRNA\ttaxon:185431\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8420\tTOR1\t\tGO:0016773\tGO_REF:0000011\tISM\tInterPro:IPR000403\tF\tTarget of rapamycin kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8420\tTOR1\t\tGO:0031931\tPMID:18796613\tIPI\tGeneDB:Tb927.11.620\tC\tTarget of rapamycin kinase 1\t\tmRNA\ttaxon:185431\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8420\tTOR1\t\tGO:0035556\tGO_REF:0000011\tISM\tInterPro:IPR000403\tP\tTarget of rapamycin kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8420\tTOR1\t\tGO:1903432\tPMID:18796613\tIMP\t\tP\tTarget of rapamycin kinase 1\t\tmRNA\ttaxon:185431\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8430\tTb927.10.8430\t\tGO:0005622\tGO_REF:0000011\tISM\t\tC\t40S ribosomal protein S12, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8430\tTb927.10.8430\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S12, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8430\tTb927.10.8430\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S12, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8430\tTb927.10.8430\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR004038\tC\t40S ribosomal protein S12, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8430\tTb927.10.8430\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR004038\tP\t40S ribosomal protein S12, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8440\tTHT1-\t\tGO:0005355\tPMID:8423781\tIMP\t\tF\tglucose transporter 1B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8440\tTHT1-\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglucose transporter 1B\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8440\tTHT1-\t\tGO:0005886\tPMID:30589893\tIDA\t\tC\tglucose transporter 1B\t\tmRNA\ttaxon:185431\t20200410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8440\tTHT1-\t\tGO:0015758\tPMID:8423781\tTAS\t\tP\tglucose transporter 1B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8440\tTHT1-\t\tGO:0016021\tPMID:8423781\tTAS\t\tC\tglucose transporter 1B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8450\tTHT1E\t\tGO:0005355\tPMID:8423781\tIMP\t\tF\tglucose transporter 1E\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8450\tTHT1E\t\tGO:0005886\tPMID:30589893\tIDA\t\tC\tglucose transporter 1E\t\tmRNA\ttaxon:185431\t20200410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8450\tTHT1E\t\tGO:0015758\tPMID:8423781\tTAS\t\tP\tglucose transporter 1E\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8450\tTHT1E\t\tGO:0016021\tPMID:8423781\tTAS\t\tC\tglucose transporter 1E\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8450\tTHT1E\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tglucose transporter 1E\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8460\tTHT1-\t\tGO:0005886\tPMID:30589893\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20200410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8460\tTHT1-\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8470\tTHT1-\t\tGO:0005886\tPMID:30589893\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20200410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8470\tTHT1-\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8480\tTHT1-\t\tGO:0005886\tPMID:30589893\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20200410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8480\tTHT1-\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8490\tTHT2-\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8490\tTHT2-\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.850\tTb927.10.850\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.850\tTb927.10.850\t\tGO:0120120\tPMID:23264645\tIDA\t\tC\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.850\tTb927.10.850\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8500\tTHT2-\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8510\tTHT2A\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8520\tTHT2-\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tglucose transporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8530\tTHT2A\t\tGO:0008645\tPMID:8554506\tIDA\t\tP\tglucose transporter 2A\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8530\tTHT2A\t\tGO:0015149\tPMID:8554506\tIMP\t\tF\tglucose transporter 2A\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8530\tTHT2A\t\tGO:0016021\tPMID:8423781\tTAS\t\tC\tglucose transporter 2A\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR002939\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0006986\tGO_REF:0000012\tISA\tUniProtKB:O89114\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0009408\tPMID:23592996\tIEP\t\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0042026\tGO_REF:0000012\tISA\tUniProtKB:O89114\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR002939\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8560\tRAB23\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tsmall GTPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8560\tRAB23\t\tGO:0005634\tPMID:15478808\tIDA\t\tC\tsmall GTPase, putative\t\tmRNA\ttaxon:185431\t20180727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8560\tRAB23\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsmall GTPase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8560\tRAB23\t\tGO:0005929\tPMID:21676215\tIDA\t\tC\tsmall GTPase, putative\t\tmRNA\ttaxon:185431\t20180727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8560\tRAB23\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tsmall GTPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8560\tRAB23\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tsmall GTPase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8560\tRAB23\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tsmall GTPase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8580\tARL3B\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR006689\tF\tADP-ribosylation factor-like protein 3b, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8580\tARL3B\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tADP-ribosylation factor-like protein 3b, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8590\tFTZC\t\tGO:0005930\tPMID:11163437\tIDA\t\tC\tflagellum transition zone component\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8590\tFTZC\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tflagellum transition zone component\t\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8590\tFTZC\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tflagellum transition zone component\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8600\tTb927.10.8600\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tVps54-like protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8610\tTb927.10.8610\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8620\tTb927.10.8620\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8630\tTb927.10.8630\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSucrase/ferredoxin-like, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8630\tTb927.10.8630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSucrase/ferredoxin-like, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8630\tTb927.10.8630\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSucrase/ferredoxin-like, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8630\tTb927.10.8630\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tSucrase/ferredoxin-like, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8630\tTb927.10.8630\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSucrase/ferredoxin-like, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8640\tTb927.10.8640\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGalactose oxidase, central domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8640\tTb927.10.8640\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tGalactose oxidase, central domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8640\tTb927.10.8640\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tGalactose oxidase, central domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8650\tRanBPL\t\tGO:0005515\tPMID:25217630\tIPI\tGeneDB:Tb927.3.1120\tF\tran binding protein, putative\t\tmRNA\ttaxon:185431\t20170914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8650\tRanBPL\t\tGO:0005634\tPMID:25217630\tIDA\t\tC\tran binding protein, putative\t\tmRNA\ttaxon:185431\t20170914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8650\tRanBPL\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tran binding protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8650\tRanBPL\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tran binding protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8660\tTb927.10.8660\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFis1 C-terminal tetratricopeptide repeat, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8670\tTb927.10.8670\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8680\tTb927.10.8680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8690\tTb927.10.8690\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTIGR00269 family protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8690\tTb927.10.8690\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTIGR00269 family protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.870\tFRW1\t\tGO:0000281\tPMID:31043517\tIMP\t\tP\tFurrow 1 protein\t\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.870\tFRW1\t\tGO:0000910\tPMID:30171070\tIPI\tGeneDB:Tb927.11.15800\tP\tFurrow 1 protein\t\tmRNA\ttaxon:185431\t20181018\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.870\tFRW1\t\tGO:0032154\tGO_REF:0000109\tIDA\t\tC\tFurrow 1 protein\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.870\tFRW1\t\tGO:0032154\tPMID:30171070\tIDA\t\tC\tFurrow 1 protein\t\tmRNA\ttaxon:185431\t20180907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.870\tFRW1\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tFurrow 1 protein\t\tmRNA\ttaxon:185431\t20181018\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8700\tTb927.10.8700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tselenoprotein, putative\tTb10.6k15.1835\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0000910\tPMID:31515877\tIMP\t\tP\tcentrin-3\t\tmRNA\ttaxon:185431\t20191122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tcentrin-3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0005515\tPMID:24892844\tIPI\tGeneDB:Tb927.7.920\tF\tcentrin-3\t\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0005515\tPMID:31515877\tIPI\tGeneDB:Tb927.7.920\tF\tcentrin-3\t\tmRNA\ttaxon:185431\t20191122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcentrin-3\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0005929\tPMID:24892844\tIDA\t\tC\tcentrin-3\t\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0005929\tPMID:31515877\tIDA\t\tC\tcentrin-3\t\tmRNA\ttaxon:185431\t20191122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tcentrin-3\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0031648\tPMID:31515877\tIMP\t\tP\tcentrin-3\t\tmRNA\ttaxon:185431\t20191122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0034613\tPMID:31515877\tIMP\t\tP\tcentrin-3\t\tmRNA\ttaxon:185431\t20191122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0036159\tPMID:24892844\tIMP\t\tP\tcentrin-3\t\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0060285\tPMID:24892844\tIMP\t\tP\tcentrin-3\t\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8720\tTb927.10.8720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCCR4-NOT transcription complex subunit 10, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8720\tTb927.10.8720\t\tGO:0005737\tPMID:18442996\tIDA\t\tC\tCCR4-NOT transcription complex subunit 10, putative\t\tmRNA\ttaxon:185431\t20120409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8720\tTb927.10.8720\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tCCR4-NOT transcription complex subunit 10, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8720\tTb927.10.8720\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCCR4-NOT transcription complex subunit 10, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8720\tTb927.10.8720\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCCR4-NOT transcription complex subunit 10, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8730\tTb927.10.8730\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tABC1 family, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8730\tTb927.10.8730\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tABC1 family, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8730\tTb927.10.8730\t\tGO:0005739\tPMID:19834910\tIDA\t\tC\tABC1 family, putative\t\tmRNA\ttaxon:185431\t20200408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8730\tTb927.10.8730\t\tGO:0005743\tPMID:19834910\tHDA\t\tC\tABC1 family, putative\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8740\tTb927.10.8740\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8740\tTb927.10.8740\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8740\tTb927.10.8740\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8750\tTb927.10.8750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGTPase activating protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8750\tTb927.10.8750\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tGTPase activating protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8750\tTb927.10.8750\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tGTPase activating protein, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8760\tTb927.10.8760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8770\tTb927.10.8770\t\tGO:0000331\tPMID:21437209\tISO\tGeneDB:TcCLB.508723.80\tC\tdisgorgin, putative\t\tmRNA\ttaxon:185431\t20120418\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8770\tTb927.10.8770\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tdisgorgin, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8770\tTb927.10.8770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdisgorgin, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8770\tTb927.10.8770\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tdisgorgin, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8780\tTb927.10.8780\t\tGO:0005929\tPMID:29931198\tIDA\t\tC\tAAA domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8790\tTb927.10.8790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tOTU-like cysteine protease, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8790\tTb927.10.8790\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tOTU-like cysteine protease, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8790\tTb927.10.8790\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tOTU-like cysteine protease, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.880\tTK\t\tGO:0004797\tPMID:27820863\tIMP\t\tF\tthymidine kinase\t\tmRNA\ttaxon:185431\t20161202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.880\tTK\t\tGO:0004797\tGO_REF:0000011\tISM\tInterPro:IPR001267\tF\tthymidine kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.880\tTK\t\tGO:0005634\tPMID:27426054\tIDA\t\tC\tthymidine kinase\t\tmRNA\ttaxon:185431\t20170705\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.880\tTK\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tthymidine kinase\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.880\tTK\t\tGO:0005739\tGO_REF:0000011\tISM\tInterPro:IPR003088\tC\tthymidine kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.880\tTK\t\tGO:0005829\tPMID:27426054\tIDA\t\tC\tthymidine kinase\t\tmRNA\ttaxon:185431\t20170705\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.880\tTK\t\tGO:0006220\tPMID:27820863\tIMP\t\tP\tthymidine kinase\t\tmRNA\ttaxon:185431\t20161202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.880\tTK\t\tGO:0010139\tPMID:27820863\tIMP\t\tP\tthymidine kinase\t\tmRNA\ttaxon:185431\t20161202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.880\tTK\t\tGO:0015949\tGO_REF:0000011\tISM\tInterPro:IPR001267\tP\tthymidine kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8800\tTb927.10.8800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8800\tTb927.10.8800\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8800\tTb927.10.8800\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8810\tTb927.10.8810\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8810\tTb927.10.8810\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8810\tTb927.10.8810\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8820\tSMEE1\t\tGO:0044877\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20210108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8820\tSMEE1\t\tGO:0120120\tPMID:23264645\tIDA\t\tC\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8820\tSMEE1\t\tGO:0140528\tPMID:29178204\tIMP\t\tP\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20210108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8830\tFAZ5\t\tGO:0005515\tPMID:25736289\tIPI\tGeneDB:Tb927.4.3740\tF\tFlagellum attachment zone protein 5\t\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8830\tFAZ5\t\tGO:0005856\tPMID:25736289\tIDA\t\tC\tFlagellum attachment zone protein 5\t\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8830\tFAZ5\t\tGO:0120119\tPMID:25736289\tIDA\t\tC\tFlagellum attachment zone protein 5\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8830\tFAZ5\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 5\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8840\tTb927.10.8840\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8850\tTb927.10.8850\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tA distinct subfamily of CDD/CDA-like deaminases, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8850\tTb927.10.8850\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tA distinct subfamily of CDD/CDA-like deaminases, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8860\tTb927.10.8860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8870\tPFR-AF1\t\tGO:0000910\tPMID:32295845\tIMP\t\tP\tParaflagellar rod (PFR) assembly factor 1\t\tmRNA\ttaxon:185431\t20200907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8870\tPFR-AF1\t\tGO:0005737\tPMID:32295845\tIDA\t\tC\tParaflagellar rod (PFR) assembly factor 1\t\tmRNA\ttaxon:185431\t20200907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8870\tPFR-AF1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tParaflagellar rod (PFR) assembly factor 1\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8880\tRIF4\t\tGO:0005634\tPMID:22654659\tIDA\t\tC\tRNA interference factor 4\t\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8880\tRIF4\t\tGO:0005737\tPMID:22654659\tIDA\t\tC\tRNA interference factor 4\t\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8880\tRIF4\t\tGO:0008408\tPMID:22654659\tIDA\t\tF\tRNA interference factor 4\t\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8880\tRIF4\t\tGO:0016246\tPMID:22654659\tIMP\t\tP\tRNA interference factor 4\t\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8890\tTb927.10.8890\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tF\tkinetoplast DNA-associated protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8890\tTb927.10.8890\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tkinetoplast DNA-associated protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8890\tTb927.10.8890\t\tGO:0006323\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tP\tkinetoplast DNA-associated protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8890\tTb927.10.8890\t\tGO:0020023\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tC\tkinetoplast DNA-associated protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8890\tTb927.10.8890\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tkinetoplast DNA-associated protein, putative\t\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.890\tFCP4\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tKIN15\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.890\tFCP4\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tKIN15\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.890\tFCP4\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\tKIN15\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.890\tFCP4\t\tGO:0005929\tPMID:32682799\tIDA\t\tC\tkinesin, putative\tKIN15\tmRNA\ttaxon:185431\t20210730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.890\tFCP4\t\tGO:0120118\tPMID:29931198\tIDA\t\tC\tkinesin, putative\tKIN15\tmRNA\ttaxon:185431\t20190111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.890\tFCP4\t\tGO:0120118\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\tKIN15\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8900\tTb927.10.8900\t\tGO:0004142\tPMID:18587155\tIMP\t\tF\tcholine/ethanolamine phosphotransferase (CEPT)\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8900\tTb927.10.8900\t\tGO:0004307\tGO_REF:0000012\tISA\tUniProtKB:Q9Y6K0\tF\tcholine/ethanolamine phosphotransferase (CEPT)\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8900\tTb927.10.8900\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tcholine/ethanolamine phosphotransferase (CEPT)\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8900\tTb927.10.8900\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tcholine/ethanolamine phosphotransferase (CEPT)\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8900\tTb927.10.8900\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tcholine/ethanolamine phosphotransferase (CEPT)\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8900\tTb927.10.8900\t\tGO:0006646\tPMID:18587155\tIMP\t\tP\tcholine/ethanolamine phosphotransferase (CEPT)\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8900\tTb927.10.8900\t\tGO:0008654\tGO_REF:0000011\tISM\tInterPro:IPR000462\tP\tcholine/ethanolamine phosphotransferase (CEPT)\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8910\tNUP181\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP181\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8910\tNUP181\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP181\t\tmRNA\ttaxon:185431\t20130402\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8910\tNUP181\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP181\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8910\tNUP181\t\tGO:0044611\tPMID:26891179\tIPI\tGeneDB:Tb927.10.7060\tC\tNucleoporin NUP181\t\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8910\tNUP181\t\tGO:0046907\tPMID:19525551\tISS\t\tP\tNucleoporin NUP181\t\tmRNA\ttaxon:185431\t20130402\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8920\tTbGRP\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR006762\tF\tras-like small GTPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8920\tTbGRP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tras-like small GTPase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8940\tKH1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tflagellum targeting protein kharon1, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8940\tKH1\t\tGO:0006605\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.5850\tP\tflagellum targeting protein kharon1, putative\t\tmRNA\ttaxon:185431\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8940\tKH1\t\tGO:0020016\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.5850\tC\tflagellum targeting protein kharon1, putative\t\tmRNA\ttaxon:185431\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8940\tKH1\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\tflagellum targeting protein kharon1, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8940\tKH1\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tflagellum targeting protein kharon1, putative\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8950\tKAP4-1\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tF\tHMG box-containing protein 2 isoform 1, mitochondrial\tHMG2-1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8950\tKAP4-1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tHMG box-containing protein 2 isoform 1, mitochondrial\tHMG2-1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8950\tKAP4-1\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tHMG box-containing protein 2 isoform 1, mitochondrial\tHMG2-1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8950\tKAP4-1\t\tGO:0006323\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tP\tHMG box-containing protein 2 isoform 1, mitochondrial\tHMG2-1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8950\tKAP4-1\t\tGO:0020023\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tC\tHMG box-containing protein 2 isoform 1, mitochondrial\tHMG2-1\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8950\tKAP4-1\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tHMG box-containing protein 2 isoform 1, mitochondrial\tHMG2-1\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8970\tKAP4-2\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tF\tHMG box-containing protein 2 isoform 2, mitochondrial\tmtHMG2-2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8970\tKAP4-2\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tHMG box-containing protein 2 isoform 2, mitochondrial\tmtHMG2-2\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8970\tKAP4-2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tHMG box-containing protein 2 isoform 2, mitochondrial\tmtHMG2-2\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8970\tKAP4-2\t\tGO:0006323\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tP\tHMG box-containing protein 2 isoform 2, mitochondrial\tmtHMG2-2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8970\tKAP4-2\t\tGO:0020023\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tC\tHMG box-containing protein 2 isoform 2, mitochondrial\tmtHMG2-2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8970\tKAP4-2\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tHMG box-containing protein 2 isoform 2, mitochondrial\tmtHMG2-2\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8980\tTb927.10.8980\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8990\tTb927.10.8990\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.900\tTb927.10.900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.900\tTb927.10.900\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.900\tTb927.10.900\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.900\tTb927.10.900\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.900\tTb927.10.900\t\tGO:0120121\tPMID:32936798\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20210727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9000\tMPSS2\t\tGO:0000963\tPMID:26833087\tIMP\t\tP\tMitochondrial processome subunit 2\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9000\tMPSS2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial processome subunit 2\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9010\tTb927.10.9010\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9010\tTb927.10.9010\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9010\tTb927.10.9010\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9020\tTb927.10.9020\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tGcd10p family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9020\tTb927.10.9020\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tGcd10p family, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9030\tTb927.10.9030\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMechanosensitive ion channel MscS, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9030\tTb927.10.9030\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMechanosensitive ion channel MscS, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9030\tTb927.10.9030\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tMechanosensitive ion channel MscS, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9030\tTb927.10.9030\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tMechanosensitive ion channel MscS, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9050\tpus7\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpseudouridine synthase TruD, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9060\tTb927.10.9060\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9070\tTb927.10.9070\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9070\tTb927.10.9070\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9070\tTb927.10.9070\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9080\tTb927.10.9080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9080\tTb927.10.9080\t\tGO:0015224\tGO_REF:0000011\tISM\tPfam:PF03092\tF\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9080\tTb927.10.9080\t\tGO:0015877\tGO_REF:0000011\tISM\tPfam:PF03092\tP\tpteridine transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9090\tTb927.10.9090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCullin binding, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9090\tTb927.10.9090\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCullin binding, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9090\tTb927.10.9090\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCullin binding, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0000287\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0000723\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0004003\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20110824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0005524\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0005634\tPMID:19646907\tIDA\t\tC\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20090805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0006310\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0051276\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9100\tTb927.10.9100\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9110\tmt-SAF37\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 37\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9110\tmt-SAF37\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 37\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9110\tmt-SAF37\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 37\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9110\tmt-SAF37\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 37\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9120\tTb927.10.9120\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9120\tTb927.10.9120\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9130\tTb927.10.9130\t\tGO:0000375\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tP\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9130\tTb927.10.9130\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tF\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9130\tTb927.10.9130\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9130\tTb927.10.9130\t\tGO:0005681\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9130\tTb927.10.9130\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9130\tTb927.10.9130\t\tGO:0008380\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tP\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9140\tPOMP20\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFAD dependent oxidoreductase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9140\tPOMP20\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tFAD dependent oxidoreductase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9140\tPOMP20\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tFAD dependent oxidoreductase, putative\t\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9150\tTb927.10.9150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9150\tTb927.10.9150\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9160\tCYC12\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tCyclin 12, L-type\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9160\tCYC12\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tCyclin 12, L-type\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9160\tCYC12\t\tGO:0032403\tPMID:26954683\tIPI\tGeneDB:Tb927.3.4170|GeneDB:Tb927.2.4510\tF\tCyclin 12, L-type\t\tmRNA\ttaxon:185431\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9160\tCYC12\t\tGO:0045291\tPMID:26954683\tIMP\t\tP\tCyclin 12, L-type\t\tmRNA\ttaxon:185431\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9170\tTb927.10.9170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9180\tTb927.10.9180\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tPRA1 family protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9180\tTb927.10.9180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPRA1 family protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9180\tTb927.10.9180\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tPRA1 family protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9190\tIleRS\t\tGO:0004822\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00392\tF\tisoleucyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9190\tIleRS\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR002301\tF\tisoleucyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9190\tIleRS\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tisoleucyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9190\tIleRS\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tisoleucyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9190\tIleRS\t\tGO:0006428\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00392\tP\tisoleucyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9190\tIleRS\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tisoleucyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.920\tTb927.10.920\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRibosomal protein L1p/L10e family, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.920\tTb927.10.920\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tRibosomal protein L1p/L10e family, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9200\tTb927.10.9200\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tNuclease-related domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9200\tTb927.10.9200\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tNuclease-related domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9210\tTb927.10.9210\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9210\tTb927.10.9210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9210\tTb927.10.9210\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9220\tTb927.10.9220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0005794\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0005802\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0005905\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0006886\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tP\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tP\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0030130\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9240\tTb927.10.9240\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tTir chaperone protein (CesT) family, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9240\tTb927.10.9240\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tTir chaperone protein (CesT) family, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9240\tTb927.10.9240\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tTir chaperone protein (CesT) family, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9240\tTb927.10.9240\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\tTir chaperone protein (CesT) family, putative\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9250\tTb927.10.9250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tadenylyl cyclase-associated protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9250\tTb927.10.9250\t\tGO:0007190\tGO_REF:0000012\tISA\tUniProtKB:Q01518\tP\tadenylyl cyclase-associated protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9250\tTb927.10.9250\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tadenylyl cyclase-associated protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9260\tTb927.10.9260\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9270\tTb927.10.9270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\temp24/gp25L/p24 family/GOLD, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9270\tTb927.10.9270\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\temp24/gp25L/p24 family/GOLD, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9280\tTb927.10.9280\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9290\tPSTK\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPhosphoseryl-tRNA Kinase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.930\tTb927.10.930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9300\tTb927.10.9300\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tadiponectin receptor protein 1\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9300\tTb927.10.9300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tadiponectin receptor protein 1\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9300\tTb927.10.9300\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tadiponectin receptor protein 1\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9300\tTb927.10.9300\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR004254\tC\tadiponectin receptor protein 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9310\tTb927.10.9310\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tHaemolysin-III related, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9310\tTb927.10.9310\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tHaemolysin-III related, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9310\tTb927.10.9310\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR004254\tC\tHaemolysin-III related, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9310\tTb927.10.9310\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tHaemolysin-III related, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9310\tTb927.10.9310\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tHaemolysin-III related, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9330\tTb927.10.9330\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9330\tTb927.10.9330\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9330\tTb927.10.9330\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9340\tTb927.10.9340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9340\tTb927.10.9340\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9340\tTb927.10.9340\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9350\tTb927.10.9350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9350\tTb927.10.9350\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9350\tTb927.10.9350\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9360\tTb927.10.9360\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tL-2-hydroxyglutarate dehydrogenase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9360\tTb927.10.9360\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tL-2-hydroxyglutarate dehydrogenase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9370\tTb927.10.9370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9380\tTb927.10.9380\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tSEP domain/UBX domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9390\tTb927.10.9390\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMacrocin-O-methyltransferase (TylF), putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9390\tTb927.10.9390\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMacrocin-O-methyltransferase (TylF), putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.940\tTb927.10.940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9400\tSF1\t\tGO:0000245\tGO_REF:0000012\tISA\tUniProtKB:Q15637\tP\tbranch point binding protein, putative\tBBP\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9400\tSF1\t\tGO:0000398\tPMID:19320097\tIMP\t\tP\tbranch point binding protein, putative\tBBP\tmRNA\ttaxon:185431\t20171123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9400\tSF1\t\tGO:0003714\tGO_REF:0000012\tISA\tUniProtKB:Q15637\tF\tbranch point binding protein, putative\tBBP\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9400\tSF1\t\tGO:0005515\tPMID:19320097\tIPI\tGeneDB:Tb927.10.3500\tF\tbranch point binding protein, putative\tBBP\tmRNA\ttaxon:185431\t20171123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9400\tSF1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tbranch point binding protein, putative\tBBP\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9400\tSF1\t\tGO:0005634\tPMID:19320097\tIDA\t\tC\tbranch point binding protein, putative\tBBP\tmRNA\ttaxon:185431\t20171123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9400\tSF1\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:Q15637\tC\tbranch point binding protein, putative\tBBP\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9400\tSF1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tbranch point binding protein, putative\tBBP\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:0004756\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00476\tF\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:0004756\tPMID:18812192\tIDA\t\tF\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20180123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:0005515\tPMID:33017394\tIPI\tGeneDB:Tb927.9.12930\tF\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20210726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:0006418\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00476\tP\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:0016260\tPMID:18812192\tIDA\t\tP\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20180123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:0072721\tPMID:33017394\tIMP\t\tP\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20210726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:1904577\tPMID:33017394\tIMP\t\tP\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20210726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9420\tTb927.10.9420\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003959\tF\tmitochondrial chaperone BCS1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9420\tTb927.10.9420\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial chaperone BCS1, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9420\tTb927.10.9420\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial chaperone BCS1, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9420\tTb927.10.9420\t\tGO:0008320\tGO_REF:0000012\tISA\tUniProtKB:BCS1_YEAST\tF\tmitochondrial chaperone BCS1, putative\t\tmRNA\ttaxon:185431\t20141125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9420\tTb927.10.9420\t\tGO:0009060\tGO_REF:0000012\tISA\tUniProtKB:Q9Y276\tP\tmitochondrial chaperone BCS1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9420\tTb927.10.9420\t\tGO:0032979\tGO_REF:0000012\tISA\tUniProtKB:BCS1_YEAST\tP\tmitochondrial chaperone BCS1, putative\t\tmRNA\ttaxon:185431\t20141125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9430\tPRS\t\tGO:0004749\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01251\tF\tphosphoribosylpyrophosphate synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9430\tPRS\t\tGO:0005524\tGO_REF:0000012\tISA\tUniProtKB:AAA29262.1\tF\tphosphoribosylpyrophosphate synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9430\tPRS\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphoribosylpyrophosphate synthetase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9430\tPRS\t\tGO:0009116\tGO_REF:0000011\tISM\tInterPro:IPR000836\tP\tphosphoribosylpyrophosphate synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9430\tPRS\t\tGO:0009152\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01251\tP\tphosphoribosylpyrophosphate synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9440\tNDH2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9440\tNDH2\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tNADH dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9440\tNDH2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH dehydrogenase\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9440\tNDH2\t\tGO:0006120\tPMID:12615338\tTAS\t\tP\tNADH dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9440\tNDH2\t\tGO:0008137\tPMID:12615338\tISM\t\tF\tNADH dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9440\tNDH2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9450\tTb927.10.9450\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tinvariant surface glycoprotein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9470\tTb927.10.9470\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9480\tTb927.10.9480\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9490\tTb927.10.9490\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 3 (ESAG3)-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9500\tTb927.10.9500\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9560\tTb927.10.9560\t\tGO:0004024\tGO_REF:0000011\tISM\tInterPro:IPR002085\tF\toxidoreductase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9560\tTb927.10.9560\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00107\tP\toxidoreductase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9560\tTb927.10.9560\t\tGO:0008270\tGO_REF:0000011\tISM\tPfam:PF00107\tF\toxidoreductase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9560\tTb927.10.9560\t\tGO:0016491\tGO_REF:0000011\tISM\tPfam:PF00107\tF\toxidoreductase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9560\tTb927.10.9560\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\toxidoreductase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9570\tPFC14\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tparaflagellar rod component, putative\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.960\tTb927.10.960\t\tGO:0005634\tPMID:19429779\tIDA\t\tC\tU4/U6-specific protein PRP4\t\tmRNA\ttaxon:185431\t20090514\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.960\tTb927.10.960\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tU4/U6-specific protein PRP4\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.960\tTb927.10.960\t\tGO:0005737\tPMID:19429779\tIDA\t\tC\tU4/U6-specific protein PRP4\t\tmRNA\ttaxon:185431\t20100927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.960\tTb927.10.960\t\tGO:0008380\tPMID:19429779\tIC\t\tP\tU4/U6-specific protein PRP4\t\tmRNA\ttaxon:185431\t20090514\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.960\tTb927.10.960\t\tGO:0030627\tPMID:20581293\tIPI\t\tF\tU4/U6-specific protein PRP4\t\tmRNA\ttaxon:185431\t20100927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9600\tTb927.10.9600\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tCMGC/DYRK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9600\tTb927.10.9600\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCMGC/DYRK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9620\tTb927.10.9620\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADH-ubiquinone oxidoreductase c\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9620\tTb927.10.9620\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tNADH-ubiquinone oxidoreductase c\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9620\tTb927.10.9620\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tNADH-ubiquinone oxidoreductase c\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9630\tTb927.10.9630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9630\tTb927.10.9630\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9630\tTb927.10.9630\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9650\tNUP152\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP152\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9650\tNUP152\t\tGO:0005643\tPMID:30550896\tHDA\t\tC\tNucleoporin NUP152\t\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9650\tNUP152\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP152\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9650\tNUP152\t\tGO:0031080\tPMID:26891179\tIPI\tGeneDB:Tb927.11.2950\tC\tNucleoporin NUP152\t\tmRNA\ttaxon:185431\t20170215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9660\tCRN\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSplicing factor CRN, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9670\tTb927.10.9670\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor family, putative\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9680\tSET9\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 9\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9700\tFAZ22\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tFlagellum attachment zone protein 22\t\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9700\tFAZ22\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 22\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9710\tTb927.10.9710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9710\tTb927.10.9710\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9710\tTb927.10.9710\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9720\tREAP-1\t\tGO:0009451\tPMID:9799244\tTAS\t\tP\tRNA-editing-associated protein 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9720\tREAP-1\t\tGO:0031019\tPMID:9799244\tIDA\t\tC\tRNA-editing-associated protein 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9720\tREAP-1\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tRNA-editing-associated protein 1\t\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9730\tTb927.10.9730\t\tGO:0005737\tPMID:29931198\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9740\tRPT6\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRegulatory particle triple-A ATPase subunit 6\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9740\tRPT6\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRegulatory particle triple-A ATPase subunit 6\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9740\tRPT6\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tRegulatory particle triple-A ATPase subunit 6\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9740\tRPT6\t\tGO:0006511\tPMID:11854272\tIMP\t\tP\tRegulatory particle triple-A ATPase subunit 6\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9740\tRPT6\t\tGO:0016887\tPMID:11854272\tIGI\t\tF\tRegulatory particle triple-A ATPase subunit 6\t\tmRNA\ttaxon:185431\t20141125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9750\tupl3\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-protein ligase, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9750\tupl3\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000569\tC\tubiquitin-protein ligase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9750\tupl3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin-protein ligase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9760\tAOX2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\talternative oxidase\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9760\tAOX2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\talternative oxidase\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9770\tGCP2\t\tGO:0000930\tPMID:26224545\tIPI\tGeneDB:Tb927.3.910\tC\tgamma-tubulin complex component 2\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9770\tGCP2\tNOT\tGO:0007052\tPMID:26224545\tIMP\t\tP\tgamma-tubulin complex component 2\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9770\tGCP2\t\tGO:0008275\tPMID:26224545\tIMP\t\tC\tgamma-tubulin complex component 2\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9770\tGCP2\t\tGO:0036064\tPMID:26224545\tIDA\t\tC\tgamma-tubulin complex component 2\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9770\tGCP2\tNOT\tGO:0043622\tPMID:26224545\tIMP\t\tP\tgamma-tubulin complex component 2\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9770\tGCP2\t\tGO:1904158\tPMID:26224545\tIMP\t\tP\tgamma-tubulin complex component 2\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9780\tTb927.10.9780\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9780\tTb927.10.9780\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9780\tTb927.10.9780\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9780\tTb927.10.9780\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9780\tTb927.10.9780\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9790\tTb927.10.9790\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.980\tTb927.10.980\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA polymerase III transcription factor (TF)IIIC subunit, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.980\tTb927.10.980\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA polymerase III transcription factor (TF)IIIC subunit, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9800\tTb927.10.9800\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF01776\tF\t60S ribosomal protein L22\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9800\tTb927.10.9800\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L22\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9800\tTb927.10.9800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L22\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9800\tTb927.10.9800\t\tGO:0005840\tGO_REF:0000011\tISM\tPfam:PF01776\tC\t60S ribosomal protein L22\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9800\tTb927.10.9800\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF01776\tP\t60S ribosomal protein L22\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9810\tTb927.10.9810\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9810\tTb927.10.9810\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9820\tMIP\t\tGO:0004222\tGO_REF:0000011\tISM\tInterPro:IPR001567\tF\tmitochondrial intermediate peptidase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9820\tMIP\t\tGO:0004222\tPMID:29698456\tIMP\t\tF\tmitochondrial intermediate peptidase\t\tmRNA\ttaxon:185431\t20180816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9820\tMIP\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P37932\tC\tmitochondrial intermediate peptidase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9820\tMIP\t\tGO:0005739\tPMID:29698456\tIDA\t\tC\tmitochondrial intermediate peptidase\t\tmRNA\ttaxon:185431\t20180816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9820\tMIP\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial intermediate peptidase\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9820\tMIP\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001567\tP\tmitochondrial intermediate peptidase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9820\tMIP\t\tGO:0034982\tPMID:29698456\tIMP\t\tP\tmitochondrial intermediate peptidase\t\tmRNA\ttaxon:185431\t20180816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9830\tTb927.10.9830\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9830\tTb927.10.9830\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9830\tTb927.10.9830\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9830\tTb927.10.9830\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9840\tJ33\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9840\tJ33\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9840\tJ33\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9850\tTb927.10.9850\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9850\tTb927.10.9850\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9850\tTb927.10.9850\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9850\tTb927.10.9850\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR002422\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9860\tTb927.10.9860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial N(5)-glutamine methyltransferase MTQ1, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9860\tTb927.10.9860\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial N(5)-glutamine methyltransferase MTQ1, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9860\tTb927.10.9860\t\tGO:0006451\tGO_REF:0000002\tISA\tUniProtKB:MTQ1\tP\tMitochondrial N(5)-glutamine methyltransferase MTQ1, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9860\tTb927.10.9860\t\tGO:0008757\tGO_REF:0000002\tISA\tUniProtKB:MTQ1_YEAST\tF\tMitochondrial N(5)-glutamine methyltransferase MTQ1, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9870\tCMF12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tComponent of motile flagella 12\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9870\tCMF12\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tComponent of motile flagella 12\t\tmRNA\ttaxon:185431\t20090429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9870\tCMF12\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tComponent of motile flagella 12\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9880\tTbL18LP\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000039\tF\t60S ribosomal protein L18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9880\tTbL18LP\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000039\tC\t60S ribosomal protein L18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9880\tTbL18LP\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L18, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9880\tTbL18LP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L18, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9880\tTbL18LP\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000039\tC\t60S ribosomal protein L18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9880\tTbL18LP\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000039\tP\t60S ribosomal protein L18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9890\tTb927.10.9890\t\tGO:0020015\tPMID:27863903|GO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.990\tESP6\t\tGO:0020016\tPMID:25931509\tIDA\t\tC\tEnriched in surface-labeled proteome protein 6\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9900\tTb927.10.9900\t\tGO:0004672\tGO_REF:0000012\tISA\tUniProtKB:Q9VYI6_DROME\tF\tABC1 protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9900\tTb927.10.9900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tABC1 protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9900\tTb927.10.9900\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tABC1 protein, putative\t\tmRNA\ttaxon:185431\t20151124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9910\tTb927.10.9910\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tPSP1 C-terminal conserved region, putative\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9910\tTb927.10.9910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPSP1 C-terminal conserved region, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9920\tTb927.10.9920\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9920\tTb927.10.9920\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9930\tPHD1\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tPHD finger domain protein 1\t\tmRNA\ttaxon:185431\t20220207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9930\tPHD1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tPHD finger domain protein 1\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9930\tPHD1\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tPHD finger domain protein 1\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9940\tTb927.10.9940\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPredicted membrane protein, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9950\tTb927.10.9950\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9960\tTb927.10.9960\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9960\tTb927.10.9960\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9970\tTb927.10.9970\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9980\tTb927.10.9980\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9980\tTb927.10.9980\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9980\tTb927.10.9980\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9980\tTb927.10.9980\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.100\tTb927.11.100\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.51.0005\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.100\tTb927.11.100\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG), putative\tTb11.51.0005\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1000\tTb927.11.1000\t\tGO:0000776\tPMID:24582333\tIDA\t\tC\tkinetoplastid kinetochore protein 16\tTb11.03.0115\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1000\tTb927.11.1000\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid kinetochore protein 16\tTb11.03.0115\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1000\tTb927.11.1000\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid kinetochore protein 16\tTb11.03.0115\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1000\tTb927.11.1000\t\tGO:0007059\tPMID:24582333\tIMP\t\tP\tkinetoplastid kinetochore protein 16\tTb11.03.0115\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0005545\tPMID:12878588\tISS\t\tF\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0005737\tPMID:12878588\tISS\t\tC\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0005737\tPMID:32618070\tIDA\t\tC\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20210719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0005770\tPMID:32618070\tIDA\t\tC\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20210719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0006622\tPMID:32618070\tIMP\t\tP\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20210719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0016020\tPMID:12878588\tISS\t\tC\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0016192\tGO_REF:0000011\tISM\tInterPro:IPR005024\tP\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10010\tTb927.11.10010\t\tGO:0030904\tGO_REF:0000011\tISM\tInterPro:IPR005377\tC\tvacuolar sorting-associated protein-like, putative\tTb11.01.1770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10010\tTb927.11.10010\t\tGO:0042147\tGO_REF:0000011\tISM\tInterPro:IPR005377\tP\tvacuolar sorting-associated protein-like, putative\tTb11.01.1770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00106\tP\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0016491\tGO_REF:0000011\tISM\tPfam:PF00106\tF\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10030\tTb927.11.10030\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002673\tF\t60S ribosomal protein L29, putative\tTb11.01.1790\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10030\tTb927.11.10030\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002673\tC\t60S ribosomal protein L29, putative\tTb11.01.1790\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10030\tTb927.11.10030\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002673\tP\t60S ribosomal protein L29, putative\tTb11.01.1790\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10040\tTb927.11.10040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10050\tmt-LAF19\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal LSU assembly factor 19\tTb11.01.1810\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10050\tmt-LAF19\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitoribosomal LSU assembly factor 19\tTb11.01.1810\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10060\tTb927.11.10060\t\tGO:0004077\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00121\tF\tBiotin--acetyl-CoA-carboxylase ligase, putative\tTb11.01.1820\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10060\tTb927.11.10060\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tBiotin--acetyl-CoA-carboxylase ligase, putative\tTb11.01.1820\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10060\tTb927.11.10060\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tBiotin--acetyl-CoA-carboxylase ligase, putative\tTb11.01.1820\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10060\tTb927.11.10060\t\tGO:0009102\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00121\tP\tBiotin--acetyl-CoA-carboxylase ligase, putative\tTb11.01.1820\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10060\tTb927.11.10060\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tBiotin--acetyl-CoA-carboxylase ligase, putative\tTb11.01.1820\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10070\tBDF3\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tBromodomain factor 3, putative\tTb11.01.1830\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10070\tBDF3\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tBromodomain factor 3, putative\tTb11.01.1830\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10080\tTb927.11.10080\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.1840\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10080\tTb927.11.10080\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.1840\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10090\tTb927.11.10090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1850\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10090\tTb927.11.10090\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1850\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1010\tJ18\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\tTb11.03.0110\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1010\tJ18\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tchaperone protein DnaJ, putative\tTb11.03.0110\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1010\tJ18\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tchaperone protein DnaJ, putative\tTb11.03.0110\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1010\tJ18\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\tTb11.03.0110\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1010\tJ18\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb11.03.0110\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10100\tTb927.11.10100\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1860\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10100\tTb927.11.10100\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1860\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10100\tTb927.11.10100\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1860\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10110\tTb927.11.10110\t\tGO:0005200\tGO_REF:0000011\tISM\tInterPro:IPR004000\tF\tactin-like protein, putative\tTb11.01.1870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10110\tTb927.11.10110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tactin-like protein, putative\tTb11.01.1870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10110\tTb927.11.10110\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tactin-like protein, putative\tTb11.01.1870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10110\tTb927.11.10110\t\tGO:0007010\tGO_REF:0000024\tISS\tGeneDB:PF14_0124\tP\tactin-like protein, putative\tTb11.01.1870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10110\tTb927.11.10110\t\tGO:0015629\tGO_REF:0000011\tISM\tInterPro:IPR004000\tC\tactin-like protein, putative\tTb11.01.1870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10120\tTb927.11.10120\t\tGO:0005929\tPMID:29931198\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1880\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10140\tTb927.11.10140\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.1900\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10140\tTb927.11.10140\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.1900\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10150\tTb927.11.10150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEnoyl-CoA hydratase/isomerase family, putative\tTb11.01.1910\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10150\tTb927.11.10150\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tEnoyl-CoA hydratase/isomerase family, putative\tTb11.01.1910\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10150\tTb927.11.10150\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tEnoyl-CoA hydratase/isomerase family, putative\tTb11.01.1910\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10160\tTb927.11.10160\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002671\tF\t60S ribosomal protein L22, putative\tTb11.01.1920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10160\tTb927.11.10160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L22, putative\tTb11.01.1920\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10160\tTb927.11.10160\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002671\tC\t60S ribosomal protein L22, putative\tTb11.01.1920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10160\tTb927.11.10160\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002671\tP\t60S ribosomal protein L22, putative\tTb11.01.1920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10170\tMRPL20\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ribosomal protein L20\tTb11.01.1930\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10170\tMRPL20\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ribosomal protein L20\tTb11.01.1930\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10170\tMRPL20\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein L20\tTb11.01.1930\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10170\tMRPL20\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein L20\tTb11.01.1930\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10170\tMRPL20\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ribosomal protein L20\tTb11.01.1930\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10190\tTERT\t\tGO:0007004\tPMID:16091631\tIMP\t\tP\ttelomerase reverse transcriptase\tTb11.01.1950\tmRNA\ttaxon:185431\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1020\tTb927.11.1020\t\tGO:0004747\tGO_REF:0000011\tISM\tInterPro:IPR002139\tF\tribokinase, putative\tTb11.03.0090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1020\tTb927.11.1020\t\tGO:0006014\tGO_REF:0000011\tISM\tInterPro:IPR002139\tP\tribokinase, putative\tTb11.03.0090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1020\tTb927.11.1020\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tribokinase, putative\tTb11.03.0090\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1020\tTb927.11.1020\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tribokinase, putative\tTb11.03.0090\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10210\tTb927.11.10210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1970\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10210\tTb927.11.10210\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1970\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10220\tTb927.11.10220\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1980\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10220\tTb927.11.10220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1980\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10220\tTb927.11.10220\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1980\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10230\tTb927.11.10230\t\tGO:0000993\tPMID:22532828\tIDA\t\tF\tRNA polymerase-associated protein CDC73, putative\tTb11.01.1990\tmRNA\ttaxon:185431\t20120601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10230\tTb927.11.10230\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA polymerase-associated protein CDC73, putative\tTb11.01.1990\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10230\tTb927.11.10230\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA polymerase-associated protein CDC73, putative\tTb11.01.1990\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10230\tTb927.11.10230\t\tGO:0016593\tPMID:22532828\tIDA\t\tC\tRNA polymerase-associated protein CDC73, putative\tTb11.01.1990\tmRNA\ttaxon:185431\t20120601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10230\tTb927.11.10230\t\tGO:0032968\tPMID:22532828\tIDA\t\tP\tRNA polymerase-associated protein CDC73, putative\tTb11.01.1990\tmRNA\ttaxon:185431\t20120601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0004175\tGO_REF:0000011\tISM\tInterPro:IPR001353\tF\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0004176\tPMID:18421378\tIDA\t\tF\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0005739\tPMID:18421378\tIDA\t\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0006264\tPMID:18421378\tIMP\t\tP\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0009376\tPMID:18421378\tIDA\t\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20110520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0030163\tPMID:12446803\tISS\t\tP\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0033955\tPMID:18421378\tIMP\t\tP\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0042645\tPMID:18421378\tIDA\t\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0070581\tPMID:18421378\tIDA\t\tP\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20110520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10250\tTb927.11.10250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2010\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10250\tTb927.11.10250\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2010\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10260\tPEX3\t\tGO:0005515\tPMID:31341002\tIPI\tGeneDB:Tb927.9.12290\tF\tPeroxin 3, putative\tTb11.01.2020\tmRNA\ttaxon:185431\t20191017\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10260\tPEX3\t\tGO:0020015\tPMID:31341002\tIDA\t\tC\tPeroxin 3, putative\tTb11.01.2020\tmRNA\ttaxon:185431\t20191017\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10260\tPEX3\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tPeroxin 3, putative\tTb11.01.2020\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10260\tPEX3\t\tGO:0033365\tPMID:31341002\tIMP\t\tP\tPeroxin 3, putative\tTb11.01.2020\tmRNA\ttaxon:185431\t20191017\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10270\tTb927.11.10270\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tGolgi SNAP receptor complex member 1, putative\tTb11.01.2030\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10280\tTb927.11.10280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc carboxypeptidase, putative\tTb11.01.2050\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10280\tTb927.11.10280\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR000834\tP\tzinc carboxypeptidase, putative\tTb11.01.2050\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1030\tkkt7\t\tGO:0000776\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid kinetochore protein 7\tTb11.03.0080\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1030\tkkt7\t\tGO:0000776\tPMID:24582333\tIDA\t\tC\tkinetoplastid kinetochore protein 7\tTb11.03.0080\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1030\tkkt7\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tkinetoplastid kinetochore protein 7\tTb11.03.0080\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1030\tkkt7\t\tGO:0007059\tPMID:24582333\tIMP\t\tP\tkinetoplastid kinetochore protein 7\tTb11.03.0080\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10330\tRCCP\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tISWI complex protein\tTb11.01.2100\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10330\tRCCP\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tISWI complex protein\tTb11.01.2100\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10330\tRCCP\t\tGO:0031010\tPMID:26378228\tIPI\tGeneDB:Tb927.7.1060|GeneDB:Tb927.10.5450|GeneDB:Tb927.2.1810\tC\tISWI complex protein\tTb11.01.2100\tmRNA\ttaxon:185431\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10330\tRCCP\t\tGO:0044212\tPMID:26378228\tIDA\t\tF\tISWI complex protein\tTb11.01.2100\tmRNA\ttaxon:185431\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10340\tpgam5\t\tGO:0004721\tGO_REF:0000012\tISA\tUniProtKB:PGAM5_DROME\tF\tSerine/threonine-protein phosphatase PGAM5, mitochondrial, putative\tTb11.01.2110\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10340\tpgam5\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSerine/threonine-protein phosphatase PGAM5, mitochondrial, putative\tTb11.01.2110\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10340\tpgam5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSerine/threonine-protein phosphatase PGAM5, mitochondrial, putative\tTb11.01.2110\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10340\tpgam5\t\tGO:0010821\tGO_REF:0000012\tISA\tUniProtKB:PGAM5_DROME\tP\tSerine/threonine-protein phosphatase PGAM5, mitochondrial, putative\tTb11.01.2110\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10340\tpgam5\t\tGO:0043539\tGO_REF:0000012\tISA\tUniProtKB:PGAM5_DROME\tF\tSerine/threonine-protein phosphatase PGAM5, mitochondrial, putative\tTb11.01.2110\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10350\tTb927.11.10350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2120\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10350\tTb927.11.10350\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2120\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10360\tTb927.11.10360\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2130\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10370\tTb927.11.10370\t\tGO:0004553\tGO_REF:0000011\tISM\tInterPro:IPR000322\tF\tglycosyl hydrolase-like protein\tTb11.01.2140\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10370\tTb927.11.10370\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tglycosyl hydrolase-like protein\tTb11.01.2140\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10370\tTb927.11.10370\t\tGO:0005975\tGO_REF:0000011\tISM\tInterPro:IPR000322\tP\tglycosyl hydrolase-like protein\tTb11.01.2140\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10390\tTb927.11.10390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2160\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10390\tTb927.11.10390\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2160\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10390\tTb927.11.10390\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2160\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1040\tTFL1\t\tGO:0005515\tPMID:29186511\tIPI\tGeneDB:Tb927.11.15580\tF\tTFIIF-like transcription factor subunit 1\tTb11.03.0060\tmRNA\ttaxon:185431\t20180404\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1040\tTFL1\t\tGO:0005634\tPMID:29186511\tIDA\t\tC\tTFIIF-like transcription factor subunit 1\tTb11.03.0060\tmRNA\ttaxon:185431\t20180404\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10400\tmS70\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSSU ribosomal protein, mitochondrial, putative\tTb11.01.2170\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10400\tmS70\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tSSU ribosomal protein, mitochondrial, putative\tTb11.01.2170\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10420\tRPA12\t\tGO:0003677\tPMID:15664659\tIDA\t\tF\tDNA-directed RNA polymerase I subunit, putative\tTb11.01.2190\tmRNA\ttaxon:185431\t20110411\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10420\tRPA12\t\tGO:0003700\tGO_REF:0000011\tISM\tInterPro:IPR001222\tF\tDNA-directed RNA polymerase I subunit, putative\tTb11.01.2190\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10420\tRPA12\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA-directed RNA polymerase I subunit, putative\tTb11.01.2190\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10420\tRPA12\t\tGO:0006354\tGO_REF:0000011\tISM\tInterPro:IPR001222\tP\tDNA-directed RNA polymerase I subunit, putative\tTb11.01.2190\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10420\tRPA12\t\tGO:0006355\tGO_REF:0000011\tISM\tInterPro:IPR001222\tP\tDNA-directed RNA polymerase I subunit, putative\tTb11.01.2190\tmRNA\ttaxon:185431\t20110411\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10450\tTb927.11.10450\t\tGO:0003975\tPMID:20382188\tIMP\t\tF\tUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative\tTb11.01.2220\tmRNA\ttaxon:185431\t20100907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10450\tTb927.11.10450\t\tGO:0006488\tGO_REF:0000012\tISA\tUniProtKB:P42864\tP\tUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative\tTb11.01.2220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10450\tTb927.11.10450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative\tTb11.01.2220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10460\tPSF2\t\tGO:0000811\tPMID:21799014\tIPI\tGeneDB:Tb927.3.4810\tC\tdna replication complex gins protein psf2\tTb11.01.2230\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10460\tPSF2\t\tGO:0005634\tPMID:21799014\tIDA\t\tC\tdna replication complex gins protein psf2\tTb11.01.2230\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10460\tPSF2\t\tGO:0006270\tPMID:21799014\tIMP\t\tP\tdna replication complex gins protein psf2\tTb11.01.2230\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10460\tPSF2\t\tGO:0007059\tPMID:21799014\tTAS\t\tP\tdna replication complex gins protein psf2\tTb11.01.2230\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10460\tPSF2\t\tGO:0044786\tPMID:21799014\tIMP\t\tP\tdna replication complex gins protein psf2\tTb11.01.2230\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10460\tPSF2\t\tGO:0071162\tPMID:21799014\tIDA\t\tC\tdna replication complex gins protein psf2\tTb11.01.2230\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10470\tTb927.11.10470\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2240\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10470\tTb927.11.10470\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2240\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10480\tTb927.11.10480\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tPQQ-like domain/WD domain, G-beta repeat/Utp21 specific WD40 associated putative domain containing protein, putative\tTb11.01.2250\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10480\tTb927.11.10480\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tPQQ-like domain/WD domain, G-beta repeat/Utp21 specific WD40 associated putative domain containing protein, putative\tTb11.01.2250\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10480\tTb927.11.10480\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tPQQ-like domain/WD domain, G-beta repeat/Utp21 specific WD40 associated putative domain containing protein, putative\tTb11.01.2250\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10490\tTb927.11.10490\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2260\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1050\tTb927.11.1050\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tribosome production factor 1, putative\tTb11.03.0050\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1050\tTb927.11.1050\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:P38805\tC\tribosome production factor 1, putative\tTb11.03.0050\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1050\tTb927.11.1050\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tribosome production factor 1, putative\tTb11.03.0050\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1050\tTb927.11.1050\t\tGO:0006396\tGO_REF:0000024\tISS\tGeneDB:PF08_0055\tP\tribosome production factor 1, putative\tTb11.03.0050\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1050\tTb927.11.1050\t\tGO:0042134\tGO_REF:0000012\tISA\tUniProtKB:P38805\tF\tribosome production factor 1, putative\tTb11.03.0050\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10500\tTb927.11.10500\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2270\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10500\tTb927.11.10500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2270\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10500\tTb927.11.10500\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2270\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10510\tTb927.11.10510\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquinone biosynthesis methyltransferase, putative\tTb11.01.2280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10510\tTb927.11.10510\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tubiquinone biosynthesis methyltransferase, putative\tTb11.01.2280\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10510\tTb927.11.10510\t\tGO:0006743\tGO_REF:0000012\tISA\tUniProtKB:P49017\tP\tubiquinone biosynthesis methyltransferase, putative\tTb11.01.2280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10510\tTb927.11.10510\t\tGO:0008425\tGO_REF:0000012\tISA\tUniProtKB:P49017\tF\tubiquinone biosynthesis methyltransferase, putative\tTb11.01.2280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10510\tTb927.11.10510\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tubiquinone biosynthesis methyltransferase, putative\tTb11.01.2280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10510\tTb927.11.10510\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tubiquinone biosynthesis methyltransferase, putative\tTb11.01.2280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10520\tKKT2\t\tGO:0000776\tPMID:24582333\tIDA\t\tC\tkinetoplastid kinetochore protein 2\tTb11.01.2290\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10520\tKKT2\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tkinetoplastid kinetochore protein 2\tTb11.01.2290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10520\tKKT2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tkinetoplastid kinetochore protein 2\tTb11.01.2290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10520\tKKT2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tkinetoplastid kinetochore protein 2\tTb11.01.2290\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10520\tKKT2\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tkinetoplastid kinetochore protein 2\tTb11.01.2290\tmRNA\ttaxon:185431\t20220209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10520\tKKT2\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tkinetoplastid kinetochore protein 2\tTb11.01.2290\tmRNA\ttaxon:185431\t20220209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10520\tKKT2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tkinetoplastid kinetochore protein 2\tTb11.01.2290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10520\tKKT2\t\tGO:0007059\tPMID:24582333\tIMP\t\tP\tkinetoplastid kinetochore protein 2\tTb11.01.2290\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10550\tTb927.11.10550\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2320\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10550\tTb927.11.10550\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2320\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10550\tTb927.11.10550\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2320\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0003676\tPMID:15694484\tISA\tUniProtKB:Q04637\tF\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20100329\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR003890\tF\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0005737\tPMID:21111007\tIDA\t\tC\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20120604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0005829\tPMID:15694484\tISA\tUniProtKB:Q04637\tC\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20100329\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20200402\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0006139\tPMID:15694484\tISA\t\tP\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0006412\tPMID:15694484\tISA\t\tP\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0010494\tPMID:26187993\tIDA\t\tC\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0016070\tPMID:15694484\tISA\tUniProtKB:Q04637\tP\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20100329\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10570\tTb927.11.10570\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.2340\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10570\tTb927.11.10570\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.2340\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10590\tTb927.11.10590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGlutathione S-transferase, C-terminal domain containing protein, putative\tTb11.01.2360\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10590\tTb927.11.10590\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tGlutathione S-transferase, C-terminal domain containing protein, putative\tTb11.01.2360\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10590\tTb927.11.10590\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tGlutathione S-transferase, C-terminal domain containing protein, putative\tTb11.01.2360\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1060\tVASH\t\tGO:0000278\tPMID:31851940\tIMP\t\tP\tVasohibin\tTb11.03.0040\tmRNA\ttaxon:185431\t20200521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1060\tVASH\t\tGO:0000902\tPMID:31851940\tIMP\t\tP\tVasohibin\tTb11.03.0040\tmRNA\ttaxon:185431\t20200521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1060\tVASH\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVasohibin\tTb11.03.0040\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10600\tmt-SAF18\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 18\tTb11.01.2370\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10620\tTb927.11.10620\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2390\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10640\tTb927.11.10640\t\tGO:0004519\tGO_REF:0000011\tISM\tInterPro:IPR000097\tF\tDNA-(apurinic or apyrimidinic site) lyase, putative\tTb11.01.2410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10640\tTb927.11.10640\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA-(apurinic or apyrimidinic site) lyase, putative\tTb11.01.2410\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10640\tTb927.11.10640\t\tGO:0006281\tGO_REF:0000011\tISM\tInterPro:IPR000097\tP\tDNA-(apurinic or apyrimidinic site) lyase, putative\tTb11.01.2410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10640\tTb927.11.10640\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDNA-(apurinic or apyrimidinic site) lyase, putative\tTb11.01.2410\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10650\tAP3B3\t\tGO:0005794\tPMID:21880705\tIDA\t\tC\tAdaptor protein complex AP-3 subunit beta-3\tTb11.01.2420\tmRNA\ttaxon:185431\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10650\tAP3B3\t\tGO:0005905\tGO_REF:0000012\tISA\tUniProtKB:O00203\tC\tAdaptor protein complex AP-3 subunit beta-3\tTb11.01.2420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10650\tAP3B3\t\tGO:0006886\tGO_REF:0000012\tISA\tUniProtKB:O00203\tP\tAdaptor protein complex AP-3 subunit beta-3\tTb11.01.2420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10650\tAP3B3\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tAdaptor protein complex AP-3 subunit beta-3\tTb11.01.2420\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10650\tAP3B3\t\tGO:0071470\tPMID:21880705\tIMP\t\tP\tAdaptor protein complex AP-3 subunit beta-3\tTb11.01.2420\tmRNA\ttaxon:185431\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10660\tBBP590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\tTb11.01.2430\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10660\tBBP590\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\tTb11.01.2430\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10670\tTb927.11.10670\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglycosyl hydrolase, putative\tTb11.01.2440\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10670\tTb927.11.10670\t\tGO:0016137\tGO_REF:0000011\tISM\tInterPro:IPR005195\tP\tglycosyl hydrolase, putative\tTb11.01.2440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10670\tTb927.11.10670\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:GO:0016787\tF\tglycosyl hydrolase, putative\tTb11.01.2440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10690\tTb927.11.10690\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2460\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10690\tTb927.11.10690\t\tGO:0005783\tPMID:20660476\tISS\t\tC\thypothetical protein, conserved\tTb11.01.2460\tmRNA\ttaxon:185431\t20100916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0005524\tGO_REF:0000011\tISM\tPfam:PF00005\tF\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0006810\tGO_REF:0000024\tISS\t\tP\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0043190\tGO_REF:0000024\tISS\t\tC\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10700\tOS-9\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglucosidase II beta subunit-like protein, putative\tTb11.01.2470\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10710\tTb927.11.10710\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2480\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10710\tTb927.11.10710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2480\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10720\tTb927.11.10720\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2490\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10720\tTb927.11.10720\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.2490\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10730\tTb927.11.10730\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000330\tF\tSWI/SNF-related helicase, putative\tTb11.01.2500\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10730\tTb927.11.10730\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001650\tF\tSWI/SNF-related helicase, putative\tTb11.01.2500\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10730\tTb927.11.10730\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSWI/SNF-related helicase, putative\tTb11.01.2500\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10740\tTb927.11.10740\t\tGO:0005768\tGO_REF:0000012\tISA\tUniProtKB:Q02767\tC\tvacuolar sorting-associated protein-like, putative\tTb11.01.2510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10740\tTb927.11.10740\t\tGO:0006623\tGO_REF:0000012\tISA\tUniProtKB:Q02767\tP\tvacuolar sorting-associated protein-like, putative\tTb11.01.2510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10750\tCWC22\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR003890\tF\tpre-mRNA-splicing factor CWC22, putative\tTb11.01.2520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10750\tCWC22\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR003890\tP\tpre-mRNA-splicing factor CWC22, putative\tTb11.01.2520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10750\tCWC22\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tpre-mRNA-splicing factor CWC22, putative\tTb11.01.2520\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0000902\tPMID:22623724\tIMP\t\tP\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0005515\tPMID:22623724\tIPI\tGeneDB:Tb927.8.2630\tF\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0008017\tPMID:22623724\tIDA\t\tF\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0015630\tPMID:22623724\tIDA\t\tC\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0016887\tPMID:22623724\tIDA\t\tF\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0043622\tPMID:22623724\tIMP\t\tP\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10760\tKIN-D\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tkinesin-D\tTb11.01.2530\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10770\tTb927.11.10770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVHS domain containing protein, putative\tTb11.01.2540\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10780\tTb927.11.10780\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tVoltage-dependent anion channel, putative\tTb11.01.2550\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10780\tTb927.11.10780\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tVoltage-dependent anion channel, putative\tTb11.01.2550\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0000314\tGO_REF:0000011\tISM\tPfam:PF00318\tC\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001865\tF\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0005515\tPMID:30993866\tIPI\tGeneDB:Tb927.10.2370\tF\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001865\tC\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001865\tP\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20141201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1080\tNOP60\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleolar protein 60\tTb11.03.0020\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1080\tNOP60\t\tGO:0005730\tPMID:29931198\tIDA\t\tC\tNucleolar protein 60\tTb11.03.0020\tmRNA\ttaxon:185431\t20180625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1080\tNOP60\t\tGO:0005819\tPMID:29931198\tIDA\t\tC\tNucleolar protein 60\tTb11.03.0020\tmRNA\ttaxon:185431\t20190111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10800\tTb927.11.10800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4496), putative\tTb11.01.2570\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10800\tTb927.11.10800\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4496), putative\tTb11.01.2570\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10800\tTb927.11.10800\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4496), putative\tTb11.01.2570\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10810\tPUF11\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tpumillio/PUF RNA binding protein 11\tTb11.01.2580|NCDS.Tb927.11.10801\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10810\tPUF11\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpumillio/PUF RNA binding protein 11\tTb11.01.2580|NCDS.Tb927.11.10801\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10820\tTb927.11.10820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCasein kinase II subunit beta, putative\tTb11.01.2590\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10820\tTb927.11.10820\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCasein kinase II subunit beta, putative\tTb11.01.2590\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10820\tTb927.11.10820\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tCasein kinase II subunit beta, putative\tTb11.01.2590\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10820\tTb927.11.10820\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCasein kinase II subunit beta, putative\tTb11.01.2590\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10840\tTb927.11.10840\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2610\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10850\tTb927.11.10850\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2620\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10850\tTb927.11.10850\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2620\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10860\tNOB1\t\tGO:0000478\tPMID:27965085\tIDA\t\tP\tNin one binding (NOB1) Zn-ribbon like, putative\tTb11.01.2630\tmRNA\ttaxon:185431\t20170707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10860\tNOB1\t\tGO:0004521\tPMID:27965085\tIDA\t\tF\tNin one binding (NOB1) Zn-ribbon like, putative\tTb11.01.2630\tmRNA\ttaxon:185431\t20170707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10860\tNOB1\t\tGO:0005515\tPMID:27965085\tIPI\tGeneDB:Tb927.9.11840\tF\tNin one binding (NOB1) Zn-ribbon like, putative\tTb11.01.2630\tmRNA\ttaxon:185431\t20170707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10860\tNOB1\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tNin one binding (NOB1) Zn-ribbon like, putative\tTb11.01.2630\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10860\tNOB1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNin one binding (NOB1) Zn-ribbon like, putative\tTb11.01.2630\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10860\tNOB1\t\tGO:0030490\tPMID:27965085\tIDA\t\tP\tNin one binding (NOB1) Zn-ribbon like, putative\tTb11.01.2630\tmRNA\ttaxon:185431\t20170707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10870\tERAP32\t\tGO:0005783\tPMID:20109450\tIDA\t\tC\t32 kDa ER-associated protein\tTb11.01.2640\tmRNA\ttaxon:185431\t20100406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10880\tTb927.11.10880\t\tGO:0005739\tPMID:19834910\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2650\tmRNA\ttaxon:185431\t20200408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1090\tClpGM6\t\tGO:0004198\tGO_REF:0000011\tISM\tInterPro:IPR001300\tF\tcalpain-like protein, putative\tTb11.57.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1090\tClpGM6\t\tGO:0005929\tPMID:25092656\tIDA\t\tC\tcalpain-like protein, putative\tTb11.57.0008\tmRNA\ttaxon:185431\t20161011\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1090\tClpGM6\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001300\tP\tcalpain-like protein, putative\tTb11.57.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1090\tClpGM6\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tcalpain-like protein, putative\tTb11.57.0008\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10900\tCMF9\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMENG\tTb11.01.2670\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10900\tCMF9\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tMENG\tTb11.01.2670\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10900\tCMF9\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tMENG\tTb11.01.2670\tmRNA\ttaxon:185431\t20090428\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10910\tTb927.11.10910\t\tGO:0000314\tGO_REF:0000011\tISM\tPfam:PF00318\tC\t40S ribosomal protein SA, putative\tTb11.01.2680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10910\tTb927.11.10910\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein SA, putative\tTb11.01.2680\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10910\tTb927.11.10910\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001865\tF\t40S ribosomal protein SA, putative\tTb11.01.2680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10910\tTb927.11.10910\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001865\tC\t40S ribosomal protein SA, putative\tTb11.01.2680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10910\tTb927.11.10910\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001865\tP\t40S ribosomal protein SA, putative\tTb11.01.2680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10920\tTb927.11.10920\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2690\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10930\tTUBD1\t\tGO:0005198\tPMID:11121746\tTAS\t\tF\ttubulin delta chain\tTb11.01.2695\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10930\tTUBD1\t\tGO:0007018\tGO_REF:0000012\tISA\tUniProtKB:Q9UJT1\tP\ttubulin delta chain\tTb11.01.2695\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10930\tTUBD1\t\tGO:0016049\tPMID:12099434\tIDA\t\tP\ttubulin delta chain\tTb11.01.2695\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10940\tTb927.11.10940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2700\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10960\tTb927.11.10960\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t2OG-Fe(II) oxygenase superfamily, putative\tTb11.01.2740\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10960\tTb927.11.10960\t\tGO:0005739\tPMID:23650088\tIDA\t\tC\t2OG-Fe(II) oxygenase superfamily, putative\tTb11.01.2740\tmRNA\ttaxon:185431\t20200409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10960\tTb927.11.10960\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\t2OG-Fe(II) oxygenase superfamily, putative\tTb11.01.2740\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10980\tTb927.11.10980\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGot1/Sft2-like family, putative\tTb11.01.2770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10990\tTb927.11.10990\t\tGO:0003743\tGO_REF:0000011\tISM\tInterPro:IPR000649\tF\ttranslation initiation factor 2 subunit, putative\tTb11.01.2780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10990\tTb927.11.10990\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR000649\tF\ttranslation initiation factor 2 subunit, putative\tTb11.01.2780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10990\tTb927.11.10990\t\tGO:0005851\tGO_REF:0000011\tISM\tInterPro:IPR000649\tC\ttranslation initiation factor 2 subunit, putative\tTb11.01.2780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10990\tTb927.11.10990\t\tGO:0006413\tGO_REF:0000011\tISM\tInterPro:IPR000649\tP\ttranslation initiation factor 2 subunit, putative\tTb11.01.2780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1100\tTb927.11.1100\t\tGO:0004198\tGO_REF:0000011\tISM\tInterPro:IPR001300\tF\tcysteine peptidase, Clan CA, family C2, putative\tTb11.47.0036\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1100\tTb927.11.1100\t\tGO:0005737\tGO_REF:0000002\tISS\t\tC\tcysteine peptidase, Clan CA, family C2, putative\tTb11.47.0036\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1100\tTb927.11.1100\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001300\tP\tcysteine peptidase, Clan CA, family C2, putative\tTb11.47.0036\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11000\tTb927.11.11000\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCalponin homology (CH) domain containing protein, putative\tTb11.01.2790\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11000\tTb927.11.11000\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tCalponin homology (CH) domain containing protein, putative\tTb11.01.2790\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11000\tTb927.11.11000\t\tGO:0005938\tGO_REF:0000109\tIDA\t\tC\tCalponin homology (CH) domain containing protein, putative\tTb11.01.2790\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11000\tTb927.11.11000\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCalponin homology (CH) domain containing protein, putative\tTb11.01.2790\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11000\tTb927.11.11000\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCalponin homology (CH) domain containing protein, putative\tTb11.01.2790\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11010\tTb927.11.11010\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2800\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11010\tTb927.11.11010\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2800\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11010\tTb927.11.11010\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11010\tTb927.11.11010\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\thypothetical protein, conserved\tTb11.01.2800\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11010\tTb927.11.11010\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.2800\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11030\tEAP4\t\tGO:0000175\tPMID:12821657\tIDA\t\tF\texosome-associated protein 4\tTb11.01.2820\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11030\tEAP4\t\tGO:0000176\tPMID:12821657\tIDA\t\tC\texosome-associated protein 4\tTb11.01.2820\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11030\tEAP4\t\tGO:0000177\tPMID:12821657\tIDA\t\tC\texosome-associated protein 4\tTb11.01.2820\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11030\tEAP4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\texosome-associated protein 4\tTb11.01.2820\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11030\tEAP4\t\tGO:0006364\tPMID:12821657\tIMP\t\tP\texosome-associated protein 4\tTb11.01.2820\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11030\tEAP4\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\texosome-associated protein 4\tTb11.01.2820\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11080\tNUP149\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP149\tTb11.01.2880\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11080\tNUP149\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP149\tTb11.01.2880\tmRNA\ttaxon:185431\t20090619\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11080\tNUP149\t\tGO:0005643\tPMID:26891179\tIPI\tGeneDB:Tb927.8.6250\tC\tNucleoporin NUP149\tTb11.01.2880\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11080\tNUP149\t\tGO:0006406\tPMID:26891179\tIPI\tGeneDB:Tb927.11.2370\tP\tNucleoporin NUP149\tTb11.01.2880\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11090\tNUP140\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP140\tTb11.01.2885\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11090\tNUP140\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP140\tTb11.01.2885\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11090\tNUP140\t\tGO:0005643\tPMID:26891179\tIPI\tGeneDB:Tb927.8.6250\tC\tNucleoporin NUP140\tTb11.01.2885\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11090\tNUP140\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP140\tTb11.01.2885\tmRNA\ttaxon:185431\t20090619\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11090\tNUP140\t\tGO:0006406\tPMID:26891179\tIPI\tGeneDB:Tb927.11.2370\tP\tNucleoporin NUP140\tTb11.01.2885\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11100\tGNA1\t\tGO:0004343\tPMID:21531872\tIDA\t\tF\tglucosamine 6-phosphate N-acetyltransferase\tTb11.01.2886\tmRNA\ttaxon:185431\t20120918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11100\tGNA1\t\tGO:0006044\tPMID:21531872\tIDA\t\tP\tglucosamine 6-phosphate N-acetyltransferase\tTb11.01.2886\tmRNA\ttaxon:185431\t20120918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11100\tGNA1\t\tGO:0020015\tPMID:21531872\tIDA\t\tC\tglucosamine 6-phosphate N-acetyltransferase\tTb11.01.2886\tmRNA\ttaxon:185431\t20120918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11110\tNEK20\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSerine/threonine-protein kinase NEK20, putative\tTb11.01.2900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11110\tNEK20\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSerine/threonine-protein kinase NEK20, putative\tTb11.01.2900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11110\tNEK20\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK20, putative\tTb11.01.2900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11120\tTb927.11.11120\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.2910\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11130\tmS71\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.2920\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11150\tU5-40K\t\tGO:0005634\tPMID:19429779\tIDA\t\tC\tU5 snRNP-specific 40 kDa protein\tTb11.01.2940\tmRNA\ttaxon:185431\t20090514\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11150\tU5-40K\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tU5 snRNP-specific 40 kDa protein\tTb11.01.2940\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11150\tU5-40K\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tU5 snRNP-specific 40 kDa protein\tTb11.01.2940\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11150\tU5-40K\t\tGO:0005829\tPMID:20581293\tIDA\t\tC\tU5 snRNP-specific 40 kDa protein\tTb11.01.2940\tmRNA\ttaxon:185431\t20100927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11150\tU5-40K\t\tGO:0008380\tPMID:19429779\tISS\t\tP\tU5 snRNP-specific 40 kDa protein\tTb11.01.2940\tmRNA\ttaxon:185431\t20090514\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11150\tU5-40K\t\tGO:0030627\tPMID:20581293\tIPI\t\tF\tU5 snRNP-specific 40 kDa protein\tTb11.01.2940\tmRNA\ttaxon:185431\t20100927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11160\tPHO91\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508831.60\tC\tLow-affinity phosphate transporter PHO91 (fragment)\tTb11.01.2950\tmRNA\ttaxon:185431\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11160\tPHO91\t\tGO:0015321\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508831.60\tF\tLow-affinity phosphate transporter PHO91 (fragment)\tTb11.01.2950\tmRNA\ttaxon:185431\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11160\tPHO91\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tLow-affinity phosphate transporter PHO91 (fragment)\tTb11.01.2950\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11160\tPHO91\t\tGO:0030643\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508831.60\tP\tLow-affinity phosphate transporter PHO91 (fragment)\tTb11.01.2950\tmRNA\ttaxon:185431\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11220\tTb927.11.11220\t\tGO:0003777\tGO_REF:0000011\tISM\tInterPro:IPR004273\tF\tdynein heavy chain, putative\tTb11.01.3010\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11220\tTb927.11.11220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdynein heavy chain, putative\tTb11.01.3010\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11220\tTb927.11.11220\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tdynein heavy chain, putative\tTb11.01.3010\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11220\tTb927.11.11220\t\tGO:0007018\tGO_REF:0000011\tISM\tInterPro:IPR004273\tP\tdynein heavy chain, putative\tTb11.01.3010\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11220\tTb927.11.11220\t\tGO:0030286\tGO_REF:0000011\tISM\tInterPro:IPR004273\tC\tdynein heavy chain, putative\tTb11.01.3010\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11230\tTb927.11.11230\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002784\tF\t60S ribosomal protein L14, putative\tTb11.01.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11230\tTb927.11.11230\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L14, putative\tTb11.01.3020\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11230\tTb927.11.11230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L14, putative\tTb11.01.3020\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11230\tTb927.11.11230\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002784\tC\t60S ribosomal protein L14, putative\tTb11.01.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11230\tTb927.11.11230\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002784\tP\t60S ribosomal protein L14, putative\tTb11.01.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11250\tcMDH\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tcytosolic malate dehydrogenase\tTb11.01.3040\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11250\tcMDH\t\tGO:0005737\tPMID:11606232\tIDA\t\tC\tcytosolic malate dehydrogenase\tTb11.01.3040\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11250\tcMDH\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcytosolic malate dehydrogenase\tTb11.01.3040\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11250\tcMDH\t\tGO:0005829\tPMID:16321390\tIDA\t\tC\tcytosolic malate dehydrogenase\tTb11.01.3040\tmRNA\ttaxon:185431\t20170615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11250\tcMDH\t\tGO:0006108\tPMID:11606232\tIDA\t\tP\tcytosolic malate dehydrogenase\tTb11.01.3040\tmRNA\ttaxon:185431\t20140606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11250\tcMDH\t\tGO:0016615\tPMID:11606232\tIDA\t\tF\tcytosolic malate dehydrogenase\tTb11.01.3040\tmRNA\ttaxon:185431\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11250\tcMDH\t\tGO:0030060\tPMID:11606232\tIDA\t\tF\tcytosolic malate dehydrogenase\tTb11.01.3040\tmRNA\ttaxon:185431\t20140606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11280\tTb927.11.11280\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.3070\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11290\tHSP70.1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\theat shock protein 70, putative\tHSP70.c|Tb11.01.3080\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11290\tHSP70.1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\theat shock protein 70, putative\tHSP70.c|Tb11.01.3080\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11290\tHSP70.1\t\tGO:0006457\tGO_REF:0000011\tISM\tProsite:PS00297|Pfam:PF00012|Prosite:PS00329\tP\theat shock protein 70, putative\tHSP70.c|Tb11.01.3080\tmRNA\ttaxon:185431\t20140702\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1130\tTb927.11.1130\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcalpain-like cysteine peptidase, putative\tTb11.v4.0001|Tb927.11.1120|Tb11.47.0035\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1130\tTb927.11.1130\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tcalpain-like cysteine peptidase, putative\tTb11.v4.0001|Tb927.11.1120|Tb11.47.0035\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11300\tTb927.11.11300\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3085\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11330\tHSP70.4\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00012|Prosite:PS00297|Prosite:PS00329\tP\theat shock protein 70\tTb11.01.3110\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11330\tHSP70.4\t\tGO:0009408\tPMID:23592996\tIEP\t\tP\theat shock protein 70\tTb11.01.3110\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11330\tHSP70.4\t\tGO:0016887\tPMID:31766407\tIDA\t\tF\theat shock protein 70\tTb11.01.3110\tmRNA\ttaxon:185431\t20200117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11330\tHSP70.4\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\theat shock protein 70\tTb11.01.3110\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11340\tGCP3\t\tGO:0000930\tPMID:26224545\tIPI\tGeneDB:Tb927.3.910\tC\tgamma-tubulin complex component 3\tTb11.01.3150\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11340\tGCP3\tNOT\tGO:0007052\tPMID:26224545\tIMP\t\tP\tgamma-tubulin complex component 3\tTb11.01.3150\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11340\tGCP3\t\tGO:0008275\tPMID:26224545\tIMP\t\tC\tgamma-tubulin complex component 3\tTb11.01.3150\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11340\tGCP3\t\tGO:0036064\tPMID:26224545\tIDA\t\tC\tgamma-tubulin complex component 3\tTb11.01.3150\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11340\tGCP3\tNOT\tGO:0043622\tPMID:26224545\tIMP\t\tP\tgamma-tubulin complex component 3\tTb11.01.3150\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11340\tGCP3\t\tGO:1904158\tPMID:26224545\tIMP\t\tP\tgamma-tubulin complex component 3\tTb11.01.3150\tmRNA\ttaxon:185431\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11350\tTb927.11.11350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3160\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11360\tRACK1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\treceptor for activated C kinase 1\tTb11.01.3170\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11360\tRACK1\t\tGO:0005080\tGO_REF:0000012\tISA\tUniProtKB:P25388\tF\treceptor for activated C kinase 1\tTb11.01.3170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11360\tRACK1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\treceptor for activated C kinase 1\tTb11.01.3170\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11360\tRACK1\t\tGO:0005840\tPMID:16469736\tIDA\t\tC\treceptor for activated C kinase 1\tTb11.01.3170\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11360\tRACK1\t\tGO:0006915\tPMID:10200516\tTAS\t\tP\treceptor for activated C kinase 1\tTb11.01.3170\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11360\tRACK1\t\tGO:0032465\tPMID:18786142\tIMP\t\tP\treceptor for activated C kinase 1\tTb11.01.3170\tmRNA\ttaxon:185431\t20090814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11370\tRACK1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\treceptor for activated C kinase 1\tTb11.01.3180\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11370\tRACK1\t\tGO:0005080\tGO_REF:0000012\tISA\tUniProtKB:P25388\tF\treceptor for activated C kinase 1\tTb11.01.3180\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11370\tRACK1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\treceptor for activated C kinase 1\tTb11.01.3180\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11370\tRACK1\t\tGO:0005840\tPMID:16469736\tIDA\t\tC\treceptor for activated C kinase 1\tTb11.01.3180\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11370\tRACK1\t\tGO:0006915\tPMID:10200516\tTAS\t\tP\treceptor for activated C kinase 1\tTb11.01.3180\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11380\tTb927.11.11380\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSUMO-interacting motif-containing protein\tTb11.01.3190\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11380\tTb927.11.11380\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.01.3190\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11390\tTb927.11.11390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t2OG-Fe(II) oxygenase superfamily, putative\tTb11.01.3200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11390\tTb927.11.11390\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t2OG-Fe(II) oxygenase superfamily, putative\tTb11.01.3200\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11390\tTb927.11.11390\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\t2OG-Fe(II) oxygenase superfamily, putative\tTb11.01.3200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11390\tTb927.11.11390\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\t2OG-Fe(II) oxygenase superfamily, putative\tTb11.01.3200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11430\tCUL1\t\tGO:0006511\tPMID:27956554\tIPI\tGeneDB:Tb927.4.2540\tP\tcullin 1, putative\tTb11.01.3260\tmRNA\ttaxon:185431\t20170104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11430\tCUL1\t\tGO:0019005\tPMID:27956554\tIPI\tGeneDB:Tb927.4.2540\tC\tcullin 1, putative\tTb11.01.3260\tmRNA\ttaxon:185431\t20170104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11430\tCUL1\t\tGO:0031461\tPMID:27956554\tIPI\tGeneDB:Tb927.4.2540\tC\tcullin 1, putative\tTb11.01.3260\tmRNA\ttaxon:185431\t20170104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11430\tCUL1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcullin 1, putative\tTb11.01.3260\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11440\tTb927.11.11440\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000445\tF\tA/G-specific adenine glycosylase, putative\tTb11.01.3270\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11440\tTb927.11.11440\t\tGO:0004844\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01084\tF\tA/G-specific adenine glycosylase, putative\tTb11.01.3270\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11440\tTb927.11.11440\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tA/G-specific adenine glycosylase, putative\tTb11.01.3270\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11440\tTb927.11.11440\t\tGO:0006281\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01084\tP\tA/G-specific adenine glycosylase, putative\tTb11.01.3270\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11460\tATOM69\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 9\tTb11.01.3290|POMP9\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11460\tATOM69\t\tGO:0005742\tPMID:25808593\tIPI\tGeneDB:Tb927.9.9660\tC\tPresent in the outer mitochondrial membrane proteome 9\tTb11.01.3290|POMP9\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11460\tATOM69\t\tGO:0006626\tPMID:25808593\tIDA\t\tP\tPresent in the outer mitochondrial membrane proteome 9\tTb11.01.3290|POMP9\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11460\tATOM69\t\tGO:0030150\tPMID:25808593\tIMP\t\tP\tPresent in the outer mitochondrial membrane proteome 9\tTb11.01.3290|POMP9\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11470\tKRIPP14\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tStumpy formation signalling pathway protein, putative\tmS62|Tb11.01.3300\tmRNA\ttaxon:185431\t20140224\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11470\tKRIPP14\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tStumpy formation signalling pathway protein, putative\tmS62|Tb11.01.3300\tmRNA\ttaxon:185431\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11470\tKRIPP14\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tStumpy formation signalling pathway protein, putative\tmS62|Tb11.01.3300\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11470\tKRIPP14\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tStumpy formation signalling pathway protein, putative\tmS62|Tb11.01.3300\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11480\tTb927.11.11480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTrichohyalin, putative\tTb11.01.3320\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11480\tTb927.11.11480\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tTrichohyalin, putative\tTb11.01.3320\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11480\tTb927.11.11480\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tTrichohyalin, putative\tTb11.01.3320\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11480\tTb927.11.11480\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tTrichohyalin, putative\tTb11.01.3320\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11480\tTb927.11.11480\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tTrichohyalin, putative\tTb11.01.3320\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11490\tTb927.11.11490\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like protein, putative\tTb11.01.3340\tmRNA\ttaxon:185431\t20140127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11490\tTb927.11.11490\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like protein, putative\tTb11.01.3340\tmRNA\ttaxon:185431\t20140127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1150\tRSP3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tradial spoke protein 3\tTb11.47.0034\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1150\tRSP3\t\tGO:0005929\tPMID:32682799\tIDA\t\tC\tradial spoke protein 3\tTb11.47.0034\tmRNA\ttaxon:185431\t20210730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1150\tRSP3\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tradial spoke protein 3\tTb11.47.0034\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1150\tRSP3\t\tGO:0060285\tPMID:16607017\tIMP\t\tP\tradial spoke protein 3\tTb11.47.0034\tmRNA\ttaxon:185431\t20150311\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11510\tTb927.11.11510\t\tGO:0003824\tGO_REF:0000002\tISM\tInterPro:IPR009218\tF\thd phosphohydrolase family protein\tTb11.01.3360\tmRNA\ttaxon:185431\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11520\tPEX11\t\tGO:0005783\tPMID:9649425\tIDA\t\tC\tglycosomal membrane protein\tTb11.01.3370\tmRNA\ttaxon:185431\t20120815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11520\tPEX11\t\tGO:0016559\tPMID:9649425\tIDA\t\tP\tglycosomal membrane protein\tTb11.01.3370\tmRNA\ttaxon:185431\t20120815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11520\tPEX11\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tglycosomal membrane protein\tTb11.01.3370\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11520\tPEX11\t\tGO:0046860\tPMID:9649425\tIDA\t\tC\tglycosomal membrane protein\tTb11.01.3370\tmRNA\ttaxon:185431\t20140606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0004402\tGO_REF:0000012\tISA\tUniProtKB:Q08649\tF\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0005634\tPMID:18631159\tIDA\t\tC\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20170427\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0010485\tPMID:18631159\tIDA\t\tF\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20170427\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0016573\tGO_REF:0000012\tISA\tUniProtKB:Q08649\tP\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0016573\tPMID:18631159\tIDA\t\tP\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20170427\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0016573\tPMID:32198348\tIMP\t\tP\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20200715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11550\tTOP2A\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA topoisomerase II alpha, putative\tTb11.v5.0035|Tb11.01.3390\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11560\tTOP2B\t\tGO:0003918\tGO_REF:0000011\tISM\tInterPro:IPR002205\tF\tDNA topoisomerase II beta, putative\tTb11.01.3390|Tb927.11.11540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11560\tTOP2B\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tDNA topoisomerase II beta, putative\tTb11.01.3390|Tb927.11.11540\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11560\tTOP2B\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA topoisomerase II beta, putative\tTb11.01.3390|Tb927.11.11540\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11560\tTOP2B\t\tGO:0006265\tGO_REF:0000011\tISM\tInterPro:IPR002205\tP\tDNA topoisomerase II beta, putative\tTb11.01.3390|Tb927.11.11540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11560\tTOP2B\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\tDNA topoisomerase II beta, putative\tTb11.01.3390|Tb927.11.11540\tmRNA\ttaxon:185431\t20141201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11590\tEIF3E\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:P60228\tF\tEukaryotic translation initiation factor 3 subunit E\tTb11.01.3420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11590\tEIF3E\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LmjF.28.2310\tC\tEukaryotic translation initiation factor 3 subunit E\tTb11.01.3420\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11590\tEIF3E\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEukaryotic translation initiation factor 3 subunit E\tTb11.01.3420\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11590\tEIF3E\t\tGO:0005852\tGO_REF:0000024\tISO\tGeneDB:LmjF.28.2310\tC\tEukaryotic translation initiation factor 3 subunit E\tTb11.01.3420\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11590\tEIF3E\t\tGO:0006413\tGO_REF:0000012\tISA\tUniProtKB:P60228\tP\tEukaryotic translation initiation factor 3 subunit E\tTb11.01.3420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11610\tTb927.11.11610\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tCactus-binding C-terminus of cactin protein, putative\tTb11.01.3480\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11610\tTb927.11.11610\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tCactus-binding C-terminus of cactin protein, putative\tTb11.01.3480\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11620\tTb927.11.11620\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.3490\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11630\tTb927.11.11630\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.3500\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11630\tTb927.11.11630\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.3500\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11640\tMCM6\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001208\tF\tDNA replication licensing factor MCM6\tTb11.01.3510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11640\tMCM6\t\tGO:0003677\tPMID:21799014\tIDA\t\tF\tDNA replication licensing factor MCM6\tTb11.01.3510\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11640\tMCM6\t\tGO:0005634\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM6\tTb11.01.3510\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11640\tMCM6\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA replication licensing factor MCM6\tTb11.01.3510\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11640\tMCM6\t\tGO:0006270\tPMID:21799014\tIDA\t\tP\tDNA replication licensing factor MCM6\tTb11.01.3510\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11640\tMCM6\t\tGO:0006270\tGO_REF:0000012\tISA\tUniProtKB:P49739\tP\tDNA replication licensing factor MCM6\tTb11.01.3510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11640\tMCM6\t\tGO:0042555\tPMID:23451133\tIDA\t\tC\tDNA replication licensing factor MCM6\tTb11.01.3510\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11640\tMCM6\t\tGO:0044786\tPMID:21799014\tIDA\t\tP\tDNA replication licensing factor MCM6\tTb11.01.3510\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11640\tMCM6\t\tGO:0071162\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM6\tTb11.01.3510\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11650\tCEP164B\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tCentrosomal protein of 164 kDa, putative\tTb11.01.3520|CMF64\tmRNA\ttaxon:185431\t20170105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11670\tRFT1\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tdolichyl-lipid chaperone, putative\tTb11.01.3540\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11670\tRFT1\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tdolichyl-lipid chaperone, putative\tTb11.01.3540\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11670\tRFT1\t\tGO:0005789\tPMID:23720757\tIGI\t\tC\tdolichyl-lipid chaperone, putative\tTb11.01.3540\tmRNA\ttaxon:185431\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11670\tRFT1\t\tGO:0005789\tPMID:20382188\tIMP\t\tC\tdolichyl-lipid chaperone, putative\tTb11.01.3540\tmRNA\ttaxon:185431\t20100913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11670\tRFT1\t\tGO:0006488\tPMID:23720757\tIMP\t\tP\tdolichyl-lipid chaperone, putative\tTb11.01.3540\tmRNA\ttaxon:185431\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11670\tRFT1\tNOT\tGO:0034202\tPMID:23720757\tIMP\t\tF\tdolichyl-lipid chaperone, putative\tTb11.01.3540\tmRNA\ttaxon:185431\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11680\tTb927.11.11680\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t2-oxoglutarate dehydrogenase E2 component, putative\tTb11.01.3550\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11680\tTb927.11.11680\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\t2-oxoglutarate dehydrogenase E2 component, putative\tTb11.01.3550\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11680\tTb927.11.11680\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\t2-oxoglutarate dehydrogenase E2 component, putative\tTb11.01.3550\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506025.50\tC\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20120112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0005764\tPMID:32334612\tIDA\t\tC\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20200522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0006897\tPMID:32334612\tIMP\t\tP\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20200522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0008553\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01040\tF\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01040\tP\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0020022\tPMID:32334612\tIDA\t\tC\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20200522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0046611\tGO_REF:0000012\tISA\tUniProtKB:Q26976\tC\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0055037\tPMID:32334612\tIDA\t\tC\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20200522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11700\tTb927.11.11700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tnucleotidyl transferase, putative\tTb11.01.3570\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11720\tTb927.11.11720\t\tGO:0007160\tGO_REF:0000011\tISM\tInterPro:IPR000413\tP\tFG-GAP repeat protein, putative\tTb11.01.3590\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11720\tTb927.11.11720\t\tGO:0008305\tGO_REF:0000011\tISM\tInterPro:IPR000413\tC\tFG-GAP repeat protein, putative\tTb11.01.3590\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11720\tTb927.11.11720\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFG-GAP repeat protein, putative\tTb11.01.3590\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11730\tTb927.11.11730\t\tGO:0000166\tGO_REF:0000012\tISA\tUniProtKB:P53384\tF\tMRP protein, putative\tTb11.01.3600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11740\tTb927.11.11740\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmembrane-bound acid phosphatase, putative\tTb11.01.3610\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11740\tTb927.11.11740\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tmembrane-bound acid phosphatase, putative\tTb11.01.3610\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0000339\tPMID:15388875\tIDA\t\tF\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20101102\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0000340\tGO_REF:0000011\tISO\tGeneDB:LmjF.28.2500\tF\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\tNOT\tGO:0000342\tGO_REF:0000011\tISO\tGeneDB:LmjF.28.2500\tF\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0003723\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0003743\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:IPR001040\tC\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20200402\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0006413\tPMID:15694484\tISA\t\tP\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0010494\tPMID:23382864\tIDA\t\tC\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11780\tTb927.11.11780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tacyl-CoA dehydrogenase, putative\tTb11.01.3640\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11780\tTb927.11.11780\t\tGO:0016491\tGO_REF:0000011\tISM\tInterPro:IPR006090\tF\tacyl-CoA dehydrogenase, putative\tTb11.01.3640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11780\tTb927.11.11780\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tacyl-CoA dehydrogenase, putative\tTb11.01.3640\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11790\tTb927.11.11790\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tR3H domain containing protein, putative\tTb11.01.3650\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11790\tTb927.11.11790\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tR3H domain containing protein, putative\tTb11.01.3650\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1180\tCRK6\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tcdc2-related kinase 6, putative\tTb11.47.0031\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1180\tCRK6\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tcdc2-related kinase 6, putative\tTb11.47.0031\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1180\tCRK6\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 6, putative\tTb11.47.0031\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11800\tTbPIF3\t\tGO:0000287\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF3\tTb11.01.3660\tmRNA\ttaxon:185431\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11800\tTbPIF3\t\tGO:0000723\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF3\tTb11.01.3660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11800\tTbPIF3\t\tGO:0004003\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF3\tTb11.01.3660\tmRNA\ttaxon:185431\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11800\tTbPIF3\t\tGO:0005524\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF3\tTb11.01.3660\tmRNA\ttaxon:185431\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11800\tTbPIF3\t\tGO:0005737\tPMID:19646907\tIDA\t\tC\tDNA repair and recombination helicase protein PIF3\tTb11.01.3660\tmRNA\ttaxon:185431\t20090805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11800\tTbPIF3\t\tGO:0006310\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF3\tTb11.01.3660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11800\tTbPIF3\t\tGO:0051276\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF3\tTb11.01.3660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11820\tTb927.11.11820\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001210\tF\t40S ribosomal protein S17, putative\tTb11.01.3675\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11820\tTb927.11.11820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S17, putative\tTb11.01.3675\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11820\tTb927.11.11820\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001210\tC\t40S ribosomal protein S17, putative\tTb11.01.3675\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11820\tTb927.11.11820\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001210\tP\t40S ribosomal protein S17, putative\tTb11.01.3675\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11830\tTb927.11.11830\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001210\tF\t40S ribosomal protein S17, putative\tTb11.01.3676\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11830\tTb927.11.11830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S17, putative\tTb11.01.3676\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11830\tTb927.11.11830\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001210\tC\t40S ribosomal protein S17, putative\tTb11.01.3676\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11830\tTb927.11.11830\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001210\tP\t40S ribosomal protein S17, putative\tTb11.01.3676\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11850\tTb927.11.11850\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tsplicing factor 3B subunit 1, putative\tTb11.01.3690\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11850\tTb927.11.11850\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tsplicing factor 3B subunit 1, putative\tTb11.01.3690\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11860\tTb927.11.11860\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tleucine-rich repeat protein (LRRP), putative\tTb11.01.3700\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11870\tmt-SAF23\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 23\tTb11.01.3710\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11870\tmt-SAF23\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 23\tTb11.01.3710\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11870\tmt-SAF23\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitoribosomal SSU assembly factor 23\tTb11.01.3710\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11870\tmt-SAF23\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 23\tTb11.01.3710\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11870\tmt-SAF23\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 23\tTb11.01.3710\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11880\tTb927.11.11880\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tconserved protein\tTb11.01.3720|Tb927.11.11890|Tb11.01.3730\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11880\tTb927.11.11880\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tconserved protein\tTb11.01.3720|Tb927.11.11890|Tb11.01.3730\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1190\tPHD2\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tPHD finger domain protein 2\tTb11.47.0030\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11900\tCOPG\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tCoatomer subunit gamma\tTb11.01.3740\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11900\tCOPG\t\tGO:0006890\tGO_REF:0000012\tISA\tUniProtKB:COPG_DROME\tP\tCoatomer subunit gamma\tTb11.01.3740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11900\tCOPG\t\tGO:0030126\tGO_REF:0000012\tISA\tUniProtKB:Q9QXK3\tC\tCoatomer subunit gamma\tTb11.01.3740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11900\tCOPG\t\tGO:0030126\tPMID:11377739\tIDA\t\tC\tCoatomer subunit gamma\tTb11.01.3740\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11920\tTb927.11.11920\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tmolybdenum cofactor biosynthesis protein, putative\tTb11.01.3750\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11930\tTb927.11.11930\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSelR domain containing protein, putative\tTb11.01.3760\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11930\tTb927.11.11930\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSelR domain containing protein, putative\tTb11.01.3760\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11940\tTb927.11.11940\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2A, putative\tTb11.01.3770\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11940\tTb927.11.11940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2A, putative\tTb11.01.3770\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11950\tTb927.11.11950\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcytochrome oxidase assembly protein, putative\tTb11.01.3780\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11950\tTb927.11.11950\t\tGO:0031966\tPMID:19834910\tRCA\t\tC\tcytochrome oxidase assembly protein, putative\tTb11.01.3780\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11960\tTb927.11.11960\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3790\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11980\tCAP15\t\tGO:0000226\tPMID:11907282\tIMP\t\tP\tcorset-associated protein 15\tTb11.01.3805\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11980\tCAP15\t\tGO:0000281\tPMID:11907282\tIMP\t\tP\tcorset-associated protein 15\tTb11.01.3805\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11980\tCAP15\t\tGO:0015630\tPMID:11907282\tIDA\t\tC\tcorset-associated protein 15\tTb11.01.3805\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11980\tCAP15\t\tGO:0070417\tPMID:11907282\tIMP\t\tP\tcorset-associated protein 15\tTb11.01.3805\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1200\tTb927.11.1200\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.47.0029\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12020\tTb927.11.12020\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3840\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12030\tTb927.11.12030\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3850\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12040\tTb927.11.12040\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tCytochrome c oxidase component, putative\tTb11.01.3860\tmRNA\ttaxon:185431\t20140127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12050\tTb927.11.12050\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3870\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12070\tTb927.11.12070\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3890\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12070\tTb927.11.12070\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.01.3890\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0000225\tPMID:12364327\tIMP\t\tF\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0006506\tPMID:12364327\tIMP\t\tP\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0008270\tPMID:15817455\tIMP\t\tF\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20090422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0000225\tPMID:12364327\tIMP\t\tF\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0006506\tPMID:12364327\tIMP\t\tP\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0008270\tPMID:15817455\tIMP\t\tF\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20090422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12090\tTb927.11.12090\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000445\tF\tendonuclease III, putative\tTb11.01.3910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12090\tTb927.11.12090\t\tGO:0004519\tGO_REF:0000024\tISS\t\tF\tendonuclease III, putative\tTb11.01.3910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12090\tTb927.11.12090\t\tGO:0006281\tGO_REF:0000012\tISA\tUniProtKB:O35980\tP\tendonuclease III, putative\tTb11.01.3910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12090\tTb927.11.12090\t\tGO:0019104\tGO_REF:0000002\tISS\tInterPro:IPR003265\tF\tendonuclease III, putative\tTb11.01.3910\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12100\tRBP5\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, putative\tTb11.01.3915\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12100\tRBP5\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\tTb11.01.3915\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12110\tTb927.11.12110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA helicase, putative\tTb11.01.3930\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12110\tTb927.11.12110\t\tGO:0006139\tGO_REF:0000011\tISM\tInterPro:IPR001650\tP\tRNA helicase, putative\tTb11.01.3930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12110\tTb927.11.12110\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tRNA helicase, putative\tTb11.01.3930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12120\tRBP9\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:P21187\tF\tRNA-binding protein, putative\tTb11.01.3940\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12120\tRBP9\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\tTb11.01.3940\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12120\tRBP9\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tRNA-binding protein, putative\tTb11.01.3940\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12120\tRBP9\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tRNA-binding protein, putative\tTb11.01.3940\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12150\tBILBO1\t\tGO:0005515\tPMID:29091964\tIPI\tGeneDB:Tb927.8.6370\tF\tflagellar pocket cytoskeletal protein bilbo1\tTb11.01.3960\tmRNA\ttaxon:185431\t20180426\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12150\tBILBO1\t\tGO:0044782\tPMID:18462016\tIMP\t\tP\tflagellar pocket cytoskeletal protein bilbo1\tTb11.01.3960\tmRNA\ttaxon:185431\t20151202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12160\tTb927.11.12160\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.3970\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12160\tTb927.11.12160\t\tGO:0005739\tPMID:23650088\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3970\tmRNA\ttaxon:185431\t20200409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12170\tTb927.11.12170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3980\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12170\tTb927.11.12170\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.3980\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12180\tTb927.11.12180\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tTb11.01.3990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12180\tTb927.11.12180\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tTb11.01.3990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12180\tTb927.11.12180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\tTb11.01.3990\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12180\tTb927.11.12180\t\tGO:0005871\tPMID:16481395\tEXP\t\tC\tkinesin, putative\tTb11.01.3990\tmRNA\ttaxon:185431\t20110420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12180\tTb927.11.12180\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\tTb11.01.3990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12190\tTb927.11.12190\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tFHA domain containing protein, putative\tTb11.01.4020\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12190\tTb927.11.12190\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tFHA domain containing protein, putative\tTb11.01.4020\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1220\tTb927.11.1220\t\tGO:0120260\tPMID:32518185\tIDA\t\tC\thypothetical protein, conserved\tTb11.47.0027\tmRNA\ttaxon:185431\t20210115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12220\tVTC4\t\tGO:0006799\tPMID:19390046\tIDA\t\tP\tcatalytic subunit of the vacuolar transporter chaperone 4\tTb11.01.4040\tmRNA\ttaxon:185431\t20120430\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12220\tVTC4\t\tGO:0008976\tPMID:24114837\tIDA\t\tF\tcatalytic subunit of the vacuolar transporter chaperone 4\tTb11.01.4040\tmRNA\ttaxon:185431\t20171005\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12220\tVTC4\t\tGO:0020022\tPMID:24114837\tIDA\t\tC\tcatalytic subunit of the vacuolar transporter chaperone 4\tTb11.01.4040\tmRNA\ttaxon:185431\t20171005\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12220\tVTC4\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tcatalytic subunit of the vacuolar transporter chaperone 4\tTb11.01.4040\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12220\tVTC4\t\tGO:0033254\tPMID:19390046\tIDA\t\tC\tcatalytic subunit of the vacuolar transporter chaperone 4\tTb11.01.4040\tmRNA\ttaxon:185431\t20120430\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12220\tVTC4\t\tGO:0046872\tPMID:19390046\tIDA\t\tF\tcatalytic subunit of the vacuolar transporter chaperone 4\tTb11.01.4040\tmRNA\ttaxon:185431\t20120430\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12230\tHslU2\t\tGO:0004176\tGO_REF:0000002\tISS\t\tF\tATP-dependent protease ATPase subunit HslU2\tTb11.01.4050\tmRNA\ttaxon:185431\t20100714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12230\tHslU2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tATP-dependent protease ATPase subunit HslU2\tTb11.01.4050\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12230\tHslU2\t\tGO:0006264\tPMID:18421378\tIMP\t\tP\tATP-dependent protease ATPase subunit HslU2\tTb11.01.4050\tmRNA\ttaxon:185431\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12230\tHslU2\t\tGO:0009376\tPMID:18421378\tIDA\t\tC\tATP-dependent protease ATPase subunit HslU2\tTb11.01.4050\tmRNA\ttaxon:185431\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12230\tHslU2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tATP-dependent protease ATPase subunit HslU2\tTb11.01.4050\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12230\tHslU2\t\tGO:0042645\tPMID:18421378\tIDA\t\tC\tATP-dependent protease ATPase subunit HslU2\tTb11.01.4050\tmRNA\ttaxon:185431\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12240\tTb927.11.12240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcysteine peptidase, Clan CA, family C19, putative\tTb11.01.4060\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12240\tTb927.11.12240\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tcysteine peptidase, Clan CA, family C19, putative\tTb11.01.4060\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12240\tTb927.11.12240\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001394\tP\tcysteine peptidase, Clan CA, family C19, putative\tTb11.01.4060\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12240\tTb927.11.12240\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C19, putative\tTb11.01.4060\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0003677\tPMID:21799014\tIDA\t\tF\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001208\tF\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0003678\tPMID:21799014\tIDA\t\tF\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0005634\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0006270\tGO_REF:0000012\tISA\tUniProtKB:P49739\tP\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0006270\tPMID:21799014\tIDA\t\tP\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0042555\tPMID:23451133\tIDA\t\tC\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0043626\tGO_REF:0000002\tISO\tGeneDB:LdBPK_090400.1\tC\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20111003\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0044770\tGO_REF:0000002\tISO\tGeneDB:LdBPK_090400.1\tP\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20111003\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0044786\tPMID:21799014\tIDA\t\tP\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0071162\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12260\tTb927.11.12260\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4080\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12270\tTb927.11.12270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdrug resistence protein, putative\tTb11.01.4090\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12270\tTb927.11.12270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tdrug resistence protein, putative\tTb11.01.4090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12270\tTb927.11.12270\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tdrug resistence protein, putative\tTb11.01.4090\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12280\tTb927.11.12280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4100\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12290\tTb927.11.12290\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4110\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1230\tTb927.11.1230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.47.0026\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1230\tTb927.11.1230\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.47.0026\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1230\tTb927.11.1230\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\tTb11.47.0026\tmRNA\ttaxon:185431\t20161207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12310\tCRK12\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tcdc2-related kinase 12\tTb11.01.4130\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12310\tCRK12\t\tGO:0005515\tPMID:23805309\tIPI\tGeneDB:Tb927.11.14030\tF\tcdc2-related kinase 12\tTb11.01.4130\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12310\tCRK12\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tcdc2-related kinase 12\tTb11.01.4130\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12310\tCRK12\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tcdc2-related kinase 12\tTb11.01.4130\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12310\tCRK12\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 12\tTb11.01.4130\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12310\tCRK12\t\tGO:0006897\tPMID:23805309\tIMP\t\tP\tcdc2-related kinase 12\tTb11.01.4130\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12310\tCRK12\t\tGO:0016301\tPMID:23805309\tIDA\t\tF\tcdc2-related kinase 12\tTb11.01.4130\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12330\tTb927.11.12330\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4150\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12330\tTb927.11.12330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4150\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12340\tTb927.11.12340\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR001841\tF\tpredicted Zinc finger, C3HC4 type (RING finger) protein\tTb11.01.4160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12350\tmt-SAF35\t\tGO:0003904\tGO_REF:0000011\tISM\t\tF\tMitoribosomal SSU assembly factor 35\tTb11.01.4170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12350\tmt-SAF35\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tMitoribosomal SSU assembly factor 35\tTb11.01.4170\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12350\tmt-SAF35\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 35\tTb11.01.4170\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12350\tmt-SAF35\t\tGO:0006281\tGO_REF:0000011\tISM\t\tP\tMitoribosomal SSU assembly factor 35\tTb11.01.4170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12360\tTb927.11.12360\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tankyrin repeat protein, putative\tTb11.01.4180\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12360\tTb927.11.12360\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tankyrin repeat protein, putative\tTb11.01.4180\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12370\tTb927.11.12370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4190\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12380\tTb927.11.12380\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4200\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12380\tTb927.11.12380\t\tGO:0005634\tPMID:28034897\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4200\tmRNA\ttaxon:185431\t20170201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12390\tTb927.11.12390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4210\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1240\tTb927.11.1240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.47.0025\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1240\tTb927.11.1240\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.47.0025\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1240\tTb927.11.1240\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\tTb11.47.0025\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1240\tTb927.11.1240\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.47.0025\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12400\tTb927.11.12400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4220\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0000278\tPMID:24453978\tIMP\t\tP\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0000278\tPMID:32661312\tIMP\t\tP\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20210721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0000776\tPMID:32184264\tIDA\t\tC\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20200629\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0004672\tPMID:32184264\tIDA\t\tF\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20200629\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0005515\tPMID:32184264\tIPI\tGeneDB:Tb927.11.1030\tF\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20200629\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0006468\tPMID:32184264\tIDA\t\tP\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20200629\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0007059\tPMID:32184264\tIMP\t\tP\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20200629\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0004672\tPMID:31150492\tIDA\t\tF\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0006468\tPMID:31150492\tIDA\t\tP\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20190712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0006468\tPMID:32184264\tIDA\t\tP\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20200629\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12430\tTb927.11.12430\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcell division cycle phosphatase 14, putative\tTb11.01.4270\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12430\tTb927.11.12430\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tcell division cycle phosphatase 14, putative\tTb11.01.4270\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12450\tBBS8\t\tGO:0020018\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\ttetratricopeptide repeat protein 8\tTb11.01.4290|TTC8\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12450\tBBS8\t\tGO:0030669\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\ttetratricopeptide repeat protein 8\tTb11.01.4290|TTC8\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12450\tBBS8\t\tGO:0034464\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\ttetratricopeptide repeat protein 8\tTb11.01.4290|TTC8\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12450\tBBS8\t\tGO:0020018\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\ttetratricopeptide repeat protein 8\tTb11.01.4290|TTC8\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12450\tBBS8\t\tGO:0030669\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\ttetratricopeptide repeat protein 8\tTb11.01.4290|TTC8\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12450\tBBS8\t\tGO:0034464\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\ttetratricopeptide repeat protein 8\tTb11.01.4290|TTC8\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12460\tTb927.11.12460\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4300\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12480\tKKIP7\t\tGO:0000776\tPMID:28034897\tIDA\t\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.01.4320\tmRNA\ttaxon:185431\t20170202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12480\tKKIP7\t\tGO:0004722\tGO_REF:0000011\tISM\tPfam:PF00149\tF\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.01.4320\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12480\tKKIP7\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.01.4320\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12480\tKKIP7\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.01.4320\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12480\tKKIP7\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:IPR006186\tF\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.01.4320\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12490\tTb927.11.12490\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4330\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1250\tmS35\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tP\tMitochondrial SSU ribosomal protein, putative\tTb11.47.0024\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1250\tmS35\t\tGO:0003723\tPMID:22396527\tIDA\t\tF\tMitochondrial SSU ribosomal protein, putative\tTb11.47.0024\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1250\tmS35\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial SSU ribosomal protein, putative\tTb11.47.0024\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1250\tmS35\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial SSU ribosomal protein, putative\tTb11.47.0024\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1250\tmS35\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tC\tMitochondrial SSU ribosomal protein, putative\tTb11.47.0024\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1250\tmS35\t\tGO:0043631\tPMID:22396527\tIDA\t\tP\tMitochondrial SSU ribosomal protein, putative\tTb11.47.0024\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1250\tmS35\t\tGO:0048255\tPMID:22396527\tIDA\t\tP\tMitochondrial SSU ribosomal protein, putative\tTb11.47.0024\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12500\tTb927.11.12500\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4340\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12500\tTb927.11.12500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4340\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12510\tTb927.11.12510\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4350\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12510\tTb927.11.12510\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4350\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12530\tFAZ3\t\tGO:0005515\tPMID:25736289\tIPI\tGeneDB:Tb927.4.3740\tF\tFlagellum attachment zone protein 3\tTb11.01.4370\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12530\tFAZ3\t\tGO:0005856\tPMID:25736289\tIDA\t\tC\tFlagellum attachment zone protein 3\tTb11.01.4370\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12530\tFAZ3\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 3\tTb11.01.4370\tmRNA\ttaxon:185431\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12530\tFAZ3\t\tGO:0071889\tPMID:25681612\tIPI\tGeneDB:Tb927.11.6870|GeneDB:Tb927.11.9530\tF\tFlagellum attachment zone protein 3\tTb11.01.4370\tmRNA\ttaxon:185431\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12530\tFAZ3\t\tGO:0120119\tPMID:25736289\tIDA\t\tC\tFlagellum attachment zone protein 3\tTb11.01.4370\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12530\tFAZ3\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tFlagellum attachment zone protein 3\tTb11.01.4370\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12540\tTb927.11.12540\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\tTb11.01.4380|Tb927.11.12550|Tb11.01.4390\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12570\tTb927.11.12570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid-specific dual specificity phosphatase, putative\tTb11.01.4410\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12590\tTb927.11.12590\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDer1-like family, putative\tTb11.01.4430\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12590\tTb927.11.12590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDer1-like family, putative\tTb11.01.4430\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12590\tTb927.11.12590\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDer1-like family, putative\tTb11.01.4430\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1260\tTb927.11.1260\t\tGO:0004008\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01511\tF\tcopper-transporting ATPase-like protein, putative\tTb11.47.0023\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1260\tTb927.11.1260\t\tGO:0005375\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01511\tF\tcopper-transporting ATPase-like protein, putative\tTb11.47.0023\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1260\tTb927.11.1260\t\tGO:0006825\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01511\tP\tcopper-transporting ATPase-like protein, putative\tTb11.47.0023\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1260\tTb927.11.1260\t\tGO:0016020\tPMID:31751595\tIDA\t\tC\tcopper-transporting ATPase-like protein, putative\tTb11.47.0023\tmRNA\ttaxon:185431\t20200120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1260\tTb927.11.1260\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tcopper-transporting ATPase-like protein, putative\tTb11.47.0023\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12600\tTb927.11.12600\t\tGO:0004003\tGO_REF:0000011\tISM\tInterPro:IPR000212\tF\tATP-dependent DNA helicase, putative\tTb11.01.4440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12600\tTb927.11.12600\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tATP-dependent DNA helicase, putative\tTb11.01.4440\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12600\tTb927.11.12600\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent DNA helicase, putative\tTb11.01.4440\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12600\tTb927.11.12600\t\tGO:0006268\tGO_REF:0000011\tISM\tInterPro:IPR000212\tP\tATP-dependent DNA helicase, putative\tTb11.01.4440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12600\tTb927.11.12600\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DNA helicase, putative\tTb11.01.4440\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12620\tTb927.11.12620\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGlucosidase II beta subunit-like, putative\tTb11.01.4460\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12640\tTb927.11.12640\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPH domain containing protein, putative\tTb11.01.4480\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12640\tTb927.11.12640\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tPH domain containing protein, putative\tTb11.01.4480\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12660\tTb927.11.12660\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4500\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12670\tTYW3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMethyltransferase TYW3, putative\tTb11.01.4510\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12670\tTYW3\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tMethyltransferase TYW3, putative\tTb11.01.4510\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12680\tTb927.11.12680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprefoldin subunit 2, putative\tTb11.01.4520\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12680\tTb927.11.12680\t\tGO:0006457\tGO_REF:0000024\tISS\t\tP\tprefoldin subunit 2, putative\tTb11.01.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12680\tTb927.11.12680\t\tGO:0016272\tGO_REF:0000024\tISS\t\tC\tprefoldin subunit 2, putative\tTb11.01.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12680\tTb927.11.12680\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tprefoldin subunit 2, putative\tTb11.01.4520\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1270\tTb927.11.1270\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.47.0022\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1270\tTb927.11.1270\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.47.0022\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1270\tTb927.11.1270\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.47.0022\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1270\tTb927.11.1270\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.47.0022\tmRNA\ttaxon:185431\t20170525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12700\tTb927.11.12700\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4550\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12700\tTb927.11.12700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4550\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12730\tTb927.11.12730\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.01.4580\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12730\tTb927.11.12730\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4580\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12740\tTb927.11.12740\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\ttRNA import complex component, putative\tTb11.01.4590\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12740\tTb927.11.12740\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\ttRNA import complex component, putative\tTb11.01.4590\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR000571\tF\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0005847\tPMID:12746436\tTAS\t\tC\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0005847\tPMID:26727667\tIPI\tGeneDB:Tb927.11.14560\tC\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20161129\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20161129\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0006396\tPMID:12746436\tIMP\t\tP\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0031426\tPMID:12746436\tIMP\t\tP\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12760\tTb927.11.12760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4610\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12760\tTb927.11.12760\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4610\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12760\tTb927.11.12760\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4610\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12780\tTb927.11.12780\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tribonucleoside-diphosphate reductase small chain, putative\tTb11.v5.0033\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12790\tRNR2\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tribonucleoside-diphosphate reductase small chain\tTb11.v4.0004\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12800\tRNR2\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tribonucleoside-diphosphate reductase small chain\tTb11.v4.0005\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12810\tRNR2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tribonucleoside-diphosphate reductase small chain\tTb11.v4.0006\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12820\tRNR2\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tribonucleoside-diphosphate reductase small chain\tTb11.v4.0007\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12830\tTb927.11.12830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tacyl-CoA binding protein, putative\tTb11.52.0001\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12830\tTb927.11.12830\t\tGO:0006631\tPMID:20382188\tEXP\t\tP\tacyl-CoA binding protein, putative\tTb11.52.0001\tmRNA\ttaxon:185431\t20100712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12830\tTb927.11.12830\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tacyl-CoA binding protein, putative\tTb11.52.0001\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12830\tTb927.11.12830\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tacyl-CoA binding protein, putative\tTb11.52.0001\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12840\tTb927.11.12840\t\tGO:0005929\tPMID:29931198\tIDA\t\tC\tDomain of unknown function (DUF4486), putative\tTb11.52.0002\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12840\tTb927.11.12840\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\tDomain of unknown function (DUF4486), putative\tTb11.52.0002\tmRNA\ttaxon:185431\t20161207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12850\tOPB\t\tGO:0004252\tGO_REF:0000002\tISS\t\tF\toligopeptidase b\tTb11.52.0003\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12850\tOPB\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\toligopeptidase b\tTb11.52.0003\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12850\tOPB\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001375\tP\toligopeptidase b\tTb11.52.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12850\tOPB\t\tGO:0008236\tGO_REF:0000011\tISM\tInterPro:IPR001375\tF\toligopeptidase b\tTb11.52.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12860\tCARP2a\t\tGO:0042493\tPMID:23877697\tIMP\t\tP\tcAMP response protein, putative\tTb11.52.0004\tmRNA\ttaxon:185431\t20130830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12860\tCARP2a\t\tGO:0042493\tPMID:23877697\tIMP\t\tP\tcAMP response protein, putative\tTb11.52.0004\tmRNA\ttaxon:185431\t20130830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12870\tTb927.11.12870\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.52.0005\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12880\tPOMP17\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tPresent in the outer mitochondrial membrane proteome 17\tTb11.52.0008|Tb11.52.0006|Tb927.11.12890\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12880\tPOMP17\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 17\tTb11.52.0008|Tb11.52.0006|Tb927.11.12890\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12880\tPOMP17\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 17\tTb11.52.0008|Tb11.52.0006|Tb927.11.12890\tmRNA\ttaxon:185431\t20150903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1290\tTb927.11.1290\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.47.0020\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12910\tTb927.11.12910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprefoldin subunit, putative\tTb11.52.0009\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12920\tTb927.11.12920\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.52.0010\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12940\tTb927.11.12940\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tUncharacterised protein family (UPF0160), putative\tTb11.52.0013\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12950\tTbRLJ\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tras-like small GTPase, putative\tTb11.52.0014\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12950\tTbRLJ\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tras-like small GTPase, putative\tTb11.52.0014\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12950\tTbRLJ\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tras-like small GTPase, putative\tTb11.52.0014\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12950\tTbRLJ\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tras-like small GTPase, putative\tTb11.52.0014\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12950\tTbRLJ\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tras-like small GTPase, putative\tTb11.52.0014\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12960\tTb927.11.12960\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.52.0019\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12980\tTb927.11.12980\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.52.0016\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12980\tTb927.11.12980\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.52.0016\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1300\tTb927.11.1300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUBA/TS-N domain containing protein, putative\tTb11.47.0019\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13000\tTb927.11.13000\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphospholipid-transporting ATPase, putative\tTb11.52.0018\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13000\tTb927.11.13000\t\tGO:0006812\tGO_REF:0000011\tISM\tInterPro:IPR001757\tP\tphospholipid-transporting ATPase, putative\tTb11.52.0018\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13000\tTb927.11.13000\t\tGO:0015662\tGO_REF:0000011\tISM\tInterPro:IPR001757\tF\tphospholipid-transporting ATPase, putative\tTb11.52.0018\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13000\tTb927.11.13000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphospholipid-transporting ATPase, putative\tTb11.52.0018\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13010\tTb927.11.13010\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.4625\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13020\tTb927.11.13020\t\tGO:0000331\tGO_REF:0000002\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin\tTb11.01.4621\tmRNA\ttaxon:185431\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13020\tTb927.11.13020\t\tGO:0005509\tPMID:1603064\tIDA\t\tF\tcalmodulin\tTb11.01.4621\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13020\tTb927.11.13020\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin\tTb11.01.4621\tmRNA\ttaxon:185431\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13020\tTb927.11.13020\t\tGO:0005929\tPMID:10960180\tIDA\t\tC\tcalmodulin\tTb11.01.4621\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13020\tTb927.11.13020\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tcalmodulin\tTb11.01.4621\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13020\tTb927.11.13020\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tcalmodulin\tTb11.01.4621\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13030\tTb927.11.13030\t\tGO:0000331\tGO_REF:0000002\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin\tTb11.01.4623\tmRNA\ttaxon:185431\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13030\tTb927.11.13030\t\tGO:0005509\tPMID:1603064\tIDA\t\tF\tcalmodulin\tTb11.01.4623\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13030\tTb927.11.13030\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin\tTb11.01.4623\tmRNA\ttaxon:185431\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13030\tTb927.11.13030\t\tGO:0005929\tPMID:10960180\tIDA\t\tC\tcalmodulin\tTb11.01.4623\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13030\tTb927.11.13030\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tcalmodulin\tTb11.01.4623\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13040\tTb927.11.13040\t\tGO:0000331\tGO_REF:0000002\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin\tTb11.01.4622\tmRNA\ttaxon:185431\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13040\tTb927.11.13040\t\tGO:0005509\tPMID:1603064\tIDA\t\tF\tcalmodulin\tTb11.01.4622\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13040\tTb927.11.13040\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin\tTb11.01.4622\tmRNA\ttaxon:185431\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13040\tTb927.11.13040\t\tGO:0005929\tPMID:10960180\tIDA\t\tC\tcalmodulin\tTb11.01.4622\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13040\tTb927.11.13040\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tcalmodulin\tTb11.01.4622\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13050\tTb927.11.13050\t\tGO:0000331\tGO_REF:0000002\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin\tTb11.01.4624\tmRNA\ttaxon:185431\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13050\tTb927.11.13050\t\tGO:0005509\tPMID:1603064\tIDA\t\tF\tcalmodulin\tTb11.01.4624\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13050\tTb927.11.13050\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin\tTb11.01.4624\tmRNA\ttaxon:185431\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13050\tTb927.11.13050\t\tGO:0005929\tPMID:10960180\tIDA\t\tC\tcalmodulin\tTb11.01.4624\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13050\tTb927.11.13050\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tcalmodulin\tTb11.01.4624\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13060\tTb927.11.13060\t\tGO:0005737\tGO_REF:0000002\tISS\t\tC\ttranslation-associated element 2, putative\tTb11.01.4630\tmRNA\ttaxon:185431\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13060\tTb927.11.13060\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\ttranslation-associated element 2, putative\tTb11.01.4630\tmRNA\ttaxon:185431\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13080\tTb927.11.13080\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4650\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13090\tTb927.11.13090\t\tGO:0003746\tGO_REF:0000011\tISM\tInterPro:IPR001662\tF\telongation factor 1 gamma, putative\tTb11.01.4660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13090\tTb927.11.13090\t\tGO:0005853\tGO_REF:0000011\tISM\tInterPro:IPR001662\tC\telongation factor 1 gamma, putative\tTb11.01.4660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13090\tTb927.11.13090\t\tGO:0006414\tGO_REF:0000011\tISM\tInterPro:IPR001662\tP\telongation factor 1 gamma, putative\tTb11.01.4660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1310\tB5R\t\tGO:0004128\tGO_REF:0000012\tISA\tUniProtKB:P36060\tF\tNADH-cytochrome b5 reductase, putative\tTb11.47.0018\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1310\tB5R\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADH-cytochrome b5 reductase, putative\tTb11.47.0018\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1310\tB5R\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-cytochrome b5 reductase, putative\tTb11.47.0018\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1310\tB5R\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADH-cytochrome b5 reductase, putative\tTb11.47.0018\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13110\tTb927.11.13110\t\tGO:0005737\tPMID:29931198\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4690\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13110\tTb927.11.13110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4690\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13130\tMBAP1\t\tGO:0005765\tGO_REF:0000012\tISA\tUniProtKB:P11117\tC\tmembrane-bound acid phosphatase 1 precursor\tTb11.01.4701\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13130\tMBAP1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmembrane-bound acid phosphatase 1 precursor\tTb11.01.4701\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13140\tCOXX\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tcytochrome oxidase subunit X\tTb11.01.4702\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13140\tCOXX\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcytochrome oxidase subunit X\tTb11.01.4702\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13150\tTb927.11.13150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUEV domain/Zinc finger, C3HC4 type (RING finger), putative\tTb11.01.4703\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13170\tTb927.11.13170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4720\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13180\tPOMP10\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 10\tTb11.01.4740\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13180\tPOMP10\t\tGO:0005739\tPMID:19834910\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 10\tTb11.01.4740\tmRNA\ttaxon:185431\t20200408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13180\tPOMP10\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPresent in the outer mitochondrial membrane proteome 10\tTb11.01.4740\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13180\tPOMP10\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 10\tTb11.01.4740\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13180\tPOMP10\t\tGO:0005743\tPMID:19834910\tHDA\t\tC\tPresent in the outer mitochondrial membrane proteome 10\tTb11.01.4740\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13190\tTb927.11.13190\t\tGO:0003746\tGO_REF:0000011\tISM\tInterPro:IPR001662\tF\telongation factor 1 gamma, putative\tTb11.01.4750\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13190\tTb927.11.13190\t\tGO:0005853\tGO_REF:0000012\tISA\tUniProtKB:P34715\tC\telongation factor 1 gamma, putative\tTb11.01.4750\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13190\tTb927.11.13190\t\tGO:0006414\tGO_REF:0000011\tISM\tInterPro:IPR001662\tP\telongation factor 1 gamma, putative\tTb11.01.4750\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1320\tNDHK\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tTb11.47.0017|NDUFS7|NUKM\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1320\tNDHK\t\tGO:0005739\tPMID:8459836\tTAS\t\tC\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tTb11.47.0017|NDUFS7|NUKM\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1320\tNDHK\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tTb11.47.0017|NDUFS7|NUKM\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1320\tNDHK\t\tGO:0006120\tPMID:8459836\tTAS\t\tP\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tTb11.47.0017|NDUFS7|NUKM\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1320\tNDHK\t\tGO:0008137\tPMID:8459836\tTAS\t\tF\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tTb11.47.0017|NDUFS7|NUKM\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1320\tNDHK\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tTb11.47.0017|NDUFS7|NUKM\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1320\tNDHK\t\tGO:0045271\tPMID:21074578\tIC\t\tC\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tTb11.47.0017|NDUFS7|NUKM\tmRNA\ttaxon:185431\t20101124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13200\tTb927.11.13200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLEM3 (ligand-effect modulator 3) family / CDC50 family, putative\tTb11.01.4760\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13200\tTb927.11.13200\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tLEM3 (ligand-effect modulator 3) family / CDC50 family, putative\tTb11.01.4760\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13200\tTb927.11.13200\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tLEM3 (ligand-effect modulator 3) family / CDC50 family, putative\tTb11.01.4760\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13230\tVAP\t\tGO:0005783\tPMID:22186015\tIDA\t\tC\tMSP (Major sperm protein) domain containing protein, putative\tTb11.01.4810\tmRNA\ttaxon:185431\t20171003\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13230\tVAP\t\tGO:0005856\tPMID:22186015\tIDA\t\tC\tMSP (Major sperm protein) domain containing protein, putative\tTb11.01.4810\tmRNA\ttaxon:185431\t20171003\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13230\tVAP\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tMSP (Major sperm protein) domain containing protein, putative\tTb11.01.4810\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13230\tVAP\t\tGO:0020016\tPMID:22186015\tIDA\t\tC\tMSP (Major sperm protein) domain containing protein, putative\tTb11.01.4810\tmRNA\ttaxon:185431\t20171003\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13240\tRPC25\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA polymerase subunit, putative\tTb11.01.4820\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13240\tRPC25\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA polymerase subunit, putative\tTb11.01.4820\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13240\tRPC25\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA polymerase subunit, putative\tTb11.01.4820\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13250\teIF-2-gamma\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:P41091\tF\teukaryotic translation initiation factor 2 gamma, putative\tTb11.01.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13250\teIF-2-gamma\t\tGO:0005525\tGO_REF:0000012\tISA\tUniProtKB:Q24208\tF\teukaryotic translation initiation factor 2 gamma, putative\tTb11.01.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13250\teIF-2-gamma\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\teukaryotic translation initiation factor 2 gamma, putative\tTb11.01.4830\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13250\teIF-2-gamma\t\tGO:0006412\tGO_REF:0000012\tISA\tUniProtKB:Q24208\tP\teukaryotic translation initiation factor 2 gamma, putative\tTb11.01.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13250\teIF-2-gamma\t\tGO:0006413\tGO_REF:0000012\tISA\tUniProtKB:Q24208\tP\teukaryotic translation initiation factor 2 gamma, putative\tTb11.01.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13250\teIF-2-gamma\t\tGO:0016282\tGO_REF:0000012\tISA\tUniProtKB:Q24208\tC\teukaryotic translation initiation factor 2 gamma, putative\tTb11.01.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13250\teIF-2-gamma\t\tGO:0042054\tGO_REF:0000012\tISA\tUniProtKB:Q24208\tF\teukaryotic translation initiation factor 2 gamma, putative\tTb11.01.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0003723\tPMID:11250905\tIDA\t\tF\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0005515\tPMID:30120147\tIPI\tGeneDB:Tb927.8.8170\tF\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20190813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0005739\tPMID:11250905\tIDA\t\tC\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0009451\tPMID:11250905\tTAS\t\tP\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0016556\tPMID:19620277\tIMP\t\tP\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20190813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13280\tgBP25\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tGuide RNA binding protein 25\tMRP2|Tb11.01.4860\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0005515\tPMID:29925672\tIPI\tGeneDB:Tb927.7.2200\tF\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20180807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0005739\tPMID:19834910\tHDA\t\tC\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20200408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0005739\tPMID:30550896\tHDA\t\tC\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0005743\tPMID:19834910\tHDA\t\tC\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0005744\tPMID:18325611\tIMP\t\tC\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20090805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0006626\tPMID:18325611\tIMP\t\tP\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0016031\tPMID:32339625\tIMP\t\tP\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20200522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0016031\tPMID:33231678\tIMP\t\tP\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20210317\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0030322\tPMID:18325611\tIMP\t\tP\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0031305\tPMID:18325611\tIDA\t\tC\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20090805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1330\tTb927.11.1330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tStress responsive A/B Barrel Domain, putative\tTb11.47.0016\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1330\tTb927.11.1330\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tStress responsive A/B Barrel Domain, putative\tTb11.47.0016\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1330\tTb927.11.1330\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tStress responsive A/B Barrel Domain, putative\tTb11.47.0016\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13300\tIFT25\t\tGO:0005929\tPMID:30709917\tIDA\t\tC\tIntraflagellar transport protein 25\tTb11.01.4880\tmRNA\ttaxon:185431\t20190816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13300\tIFT25\t\tGO:0060271\tPMID:30709917\tIMP\t\tP\tIntraflagellar transport protein 25\tTb11.01.4880\tmRNA\ttaxon:185431\t20190816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13310\tTb927.11.13310\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4890\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13320\tTb927.11.13320\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4900\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13320\tTb927.11.13320\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4900\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13330\tTb927.11.13330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.4910\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13360\tTb927.11.13360\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tAAA ATPase, putative\tTb11.01.4940\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13360\tTb927.11.13360\t\tGO:0016887\tGO_REF:0000011\tISM\tInterPro:IPR003959\tF\tAAA ATPase, putative\tTb11.01.4940\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13360\tTb927.11.13360\t\tGO:0019538\tGO_REF:0000011\tISM\tPfam:PF00004\tP\tAAA ATPase, putative\tTb11.01.4940\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13380\tVEX2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tVSG Exclusion Protein 2\tTb11.01.4960\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13380\tVEX2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tVSG Exclusion Protein 2\tTb11.01.4960\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1340\tFC1\t\tGO:0005515\tPMID:26133384\tIPI\tGeneDB:Tb927.7.6310\tF\tFlagella connector protein 1\tTb11.47.0015\tmRNA\ttaxon:185431\t20160714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1340\tFC1\t\tGO:0005929\tPMID:26133384\tIDA\t\tC\tFlagella connector protein 1\tTb11.47.0015\tmRNA\ttaxon:185431\t20160714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1340\tFC1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tFlagella connector protein 1\tTb11.47.0015\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1340\tFC1\t\tGO:0044458\tPMID:26133384\tIMP\t\tP\tFlagella connector protein 1\tTb11.47.0015\tmRNA\ttaxon:185431\t20160714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13400\tBDF5\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tBromodomain factor 5\tTb11.01.5000\tmRNA\ttaxon:185431\t20220207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13400\tBDF5\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tBromodomain factor 5\tTb11.01.5000\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13400\tBDF5\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tBromodomain factor 5\tTb11.01.5000\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13410\tTb927.11.13410\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5010\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13410\tTb927.11.13410\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5010\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13420\tTb927.11.13420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPPPDE putative peptidase domain containing protein, putative\tTb11.01.5020\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13440\tMCP21\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\tTb11.01.5040\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13440\tMCP21\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial carrier protein\tTb11.01.5040\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13440\tMCP21\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.01.5040\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13440\tMCP21\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001993\tC\tmitochondrial carrier protein\tTb11.01.5040\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13440\tMCP21\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\tTb11.01.5040\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13470\tTb927.11.13470\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPPPDE putative peptidase domain containing protein, putative\tTb11.01.5070\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13480\tTb927.11.13480\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.01.5080\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13480\tTb927.11.13480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.01.5080\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13480\tTb927.11.13480\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.01.5080\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0005262\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tF\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0005515\tPMID:32184243\tIPI\tGeneDB:Tb927.7.1470|GeneDB:Tb927.10.1570|GeneDB:Tb927.11.5280\tF\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20200623\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0005739\tPMID:32184243\tIPI\tGeneDB:Tb927.7.1470|GeneDB:Tb927.10.1570|GeneDB:Tb927.11.5280\tC\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20200623\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0005739\tPMID:24305511\tIDA\t\tC\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20171005\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0006851\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tP\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0015292\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tF\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0031305\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tC\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0051561\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tP\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:1990246\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tC\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13500\tTb927.11.13500\t\tGO:0031514\tGO_REF:0000011\tISM\tInterPro:IPR007824\tC\tpar1\tTb11.01.5100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13500\tTb927.11.13500\t\tGO:0044782\tGO_REF:0000001\tISS\t\tP\tpar1\tTb11.01.5100\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13500\tTb927.11.13500\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tpar1\tTb11.01.5100\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13510\tTb927.11.13510\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5110\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13510\tTb927.11.13510\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.5110\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13520\tTb927.11.13520\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5120\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13520\tTb927.11.13520\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5120\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13530\tTb927.11.13530\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5130\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13530\tTb927.11.13530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5130\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13530\tTb927.11.13530\t\tGO:0005819\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5130\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13540\tTb927.11.13540\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5140\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13550\tTb927.11.13550\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5150\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13560\tSET10\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tSET domain protein 10\tTb11.01.5160\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13560\tSET10\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 10\tTb11.01.5160\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13570\tTb927.11.13570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5170\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0005739\tGO_REF:0000002\tISS\t\tC\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:O13525\tC\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20140127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0006744\tGO_REF:0000012\tISA\tUniProtKB:O13525\tP\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13590\tTb927.11.13590\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.5185\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1360\tTZP62.5\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR007087\tF\tzinc-finger of a C2HC-type, putative\tTb11.47.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1360\tTZP62.5\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tzinc-finger of a C2HC-type, putative\tTb11.47.0013\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13600\tJ60\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.01.5190\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13610\tTb927.11.13610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\trhodanese-like domain containing protein, putative\tTb11.01.5195\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13610\tTb927.11.13610\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\trhodanese-like domain containing protein, putative\tTb11.01.5195\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13610\tTb927.11.13610\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\trhodanese-like domain containing protein, putative\tTb11.01.5195\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13620\tTb927.11.13620\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\trhodanese-like domain containing protein, putative\tTb11.01.5200\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13620\tTb927.11.13620\t\tGO:0005739\tPMID:15223320\tISM\t\tC\trhodanese-like domain containing protein, putative\tTb11.01.5200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13620\tTb927.11.13620\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\trhodanese-like domain containing protein, putative\tTb11.01.5200\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13620\tTb927.11.13620\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\trhodanese-like domain containing protein, putative\tTb11.01.5200\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0003677\tPMID:15694344\tIDA\t\tF\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0005634\tGO_REF:0000024\tISO\tUniProtKB:Q9U6M1|UniProtKB:TET1_MOUSE\tC\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0005634\tPMID:10562569|PMID:15694344|PMID:17389644\tIDA\t\tC\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0008198\tPMID:22514282\tIMP\t\tF\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0016458\tPMID:10562569\tTAS\t\tP\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20090901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0050341\tGO_REF:0000024\tISO\tUniProtKB:Q9U6M1\tF\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0070580\tPMID:22514282|PMID:17389644|PMID:19136460|PMID:PMID:15694344\tIMP\t\tP\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0004362\tGO_REF:0000012\tISA\tUniProtKB:CYB5_DROME\tF\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20100714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13660\tTb927.11.13660\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5235\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13690\tRSP11\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRadial spoke protein 11\tTb11.01.5260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13690\tRSP11\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tRadial spoke protein 11\tTb11.01.5260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13690\tRSP11\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.09.1530\tC\tRadial spoke protein 11\tTb11.01.5260\tmRNA\ttaxon:185431\t20160720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13690\tRSP11\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRadial spoke protein 11\tTb11.01.5260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13690\tRSP11\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tRadial spoke protein 11\tTb11.01.5260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13690\tRSP11\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.09.1530\tC\tRadial spoke protein 11\tTb11.01.5260\tmRNA\ttaxon:185431\t20160720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0003756\tGO_REF:0000002\tISS\t\tF\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20100721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0005829\tPMID:20826822\tIDA\t\tC\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20170914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0015036\tGO_REF:0000002\tISS\t\tF\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13700\tBLD10\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\tTb11.01.5270\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13710\tTb927.11.13710\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.5280\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13730\tODC\t\tGO:0004586\tPMID:10985770\tIDA\t\tF\tornithine decarboxylase\tTb11.01.5300\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13730\tODC\t\tGO:0006596\tPMID:10985770\tTAS\t\tP\tornithine decarboxylase\tTb11.01.5300\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0004016\tPMID:24879126\tIGI\tUniProtKB:CYAA_YEAST\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20150609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0005929\tPMID:24879126\tIDA\t\tC\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20150609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0042803\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.16190|GeneDB:Tb927.11.17040\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13750\tRAB4\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tRas-related protein Rab4\tTb11.01.5320\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13750\tRAB4\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tRas-related protein Rab4\tTb11.01.5320\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13760\tTb927.11.13760\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.5330\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13770\tTb927.11.13770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLEM3 (ligand-effect modulator 3) family / CDC50 family, putative\tTb11.01.5340\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13780\tTb927.11.13780\t\tGO:0003779\tGO_REF:0000011\tISM\tInterPro:IPR002097\tF\tprofilin\tTb11.01.5350\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13780\tTb927.11.13780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprofilin\tTb11.01.5350\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13780\tTb927.11.13780\t\tGO:0007010\tPMID:9099881\tIMP\tInterPro:IPR002097\tP\tprofilin\tTb11.01.5350\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13780\tTb927.11.13780\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tprofilin\tTb11.01.5350\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13780\tTb927.11.13780\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tprofilin\tTb11.01.5350\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13790\tTb927.11.13790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5355\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13790\tTb927.11.13790\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5355\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13800\tTb927.11.13800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5365\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13810\tTb927.11.13810\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.5370\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13810\tTb927.11.13810\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.5370\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13810\tTb927.11.13810\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.5370\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13810\tTb927.11.13810\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.5370\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13820\tTb927.11.13820\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5380\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13830\tJ63\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tDnaJ domain containing protein, putative\tTb11.01.5390\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13830\tJ63\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.01.5390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13830\tJ63\t\tGO:0031966\tPMID:19834910\tRCA\t\tC\tDnaJ domain containing protein, putative\tTb11.01.5390\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13840\tTb927.11.13840\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.5400\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13850\tTb927.11.13850\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5410\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13860\tTb927.11.13860\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5420\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13860\tTb927.11.13860\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5420\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13860\tTb927.11.13860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5420\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13870\tTb927.11.13870\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tuncharacterized protein, PH0010 family/AmmeMemoRadiSam system protein A, putative\tTb11.01.5440\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13880\tTb927.11.13880\t\tGO:0004725\tGO_REF:0000011\tISM\tInterPro:IPR000242\tF\tkinetoplastid-specific protein tyrosine phosphatase, putative\tTb11.01.5450\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13880\tTb927.11.13880\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid-specific protein tyrosine phosphatase, putative\tTb11.01.5450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13880\tTb927.11.13880\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinetoplastid-specific protein tyrosine phosphatase, putative\tTb11.01.5450\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13880\tTb927.11.13880\t\tGO:0008138\tGO_REF:0000011\tISM\tInterPro:IPR000340\tF\tkinetoplastid-specific protein tyrosine phosphatase, putative\tTb11.01.5450\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13890\tTb927.11.13890\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAKAP7 2'5' RNA ligase-like domain containing protein, putative\tTb11.01.5460\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13890\tTb927.11.13890\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tAKAP7 2'5' RNA ligase-like domain containing protein, putative\tTb11.01.5460\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1390\tCITFA-1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tclass I transcription factor A, subunit 1\tTb11.47.0010\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1390\tCITFA-1\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tclass I transcription factor A, subunit 1\tTb11.47.0010\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1390\tCITFA-1\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tclass I transcription factor A, subunit 1\tTb11.47.0010\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13900\tCETN5\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tCentrin-5\tTb11.01.5470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13900\tCETN5\t\tGO:0005509\tPMID:31161731\tIDA\t\tF\tCentrin-5\tTb11.01.5470\tmRNA\ttaxon:185431\t20190709\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13900\tCETN5\t\tGO:0005515\tPMID:31161731\tIPI\tGeneDB:Tb927.07.3410|GeneDB:Tb927.10.8710|GeneDB:Tb927.04.2260\tF\tCentrin-5\tTb11.01.5470\tmRNA\ttaxon:185431\t20190709\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13900\tCETN5\t\tGO:0005634\tPMID:31161731\tIDA\t\tC\tCentrin-5\tTb11.01.5470\tmRNA\ttaxon:185431\t20190709\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13900\tCETN5\t\tGO:0005737\tPMID:31161731\tIDA\t\tC\tCentrin-5\tTb11.01.5470\tmRNA\ttaxon:185431\t20190709\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13900\tCETN5\t\tGO:0005929\tPMID:31161731\tIDA\t\tC\tCentrin-5\tTb11.01.5470\tmRNA\ttaxon:185431\t20190709\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13900\tCETN5\t\tGO:0036064\tGO_REF:0000012\tISA\tUniProtKB:P05434\tC\tCentrin-5\tTb11.01.5470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13910\tTb927.11.13910\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.5480\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13910\tTb927.11.13910\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.5480\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13910\tTb927.11.13910\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.5480\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13920\tKIN2B\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin-II 85 Kd subunit, putative\tTb11.01.5490\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13920\tKIN2B\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin-II 85 Kd subunit, putative\tTb11.01.5490\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13920\tKIN2B\t\tGO:0005871\tPMID:16481395\tEXP\t\tC\tkinesin-II 85 Kd subunit, putative\tTb11.01.5490\tmRNA\ttaxon:185431\t20110420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13920\tKIN2B\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin-II 85 Kd subunit, putative\tTb11.01.5490\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13920\tKIN2B\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tkinesin-II 85 Kd subunit, putative\tTb11.01.5490\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13920\tKIN2B\t\tGO:0060271\tPMID:32503938\tIMP\t\tP\tkinesin-II 85 Kd subunit, putative\tTb11.01.5490\tmRNA\ttaxon:185431\t20220107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13930\tTb927.11.13930\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR002942\tF\tU3 small nucleolar ribonucleoprotein protein IMP3, putative\tTb11.01.5500\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13930\tTb927.11.13930\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P32899\tC\tU3 small nucleolar ribonucleoprotein protein IMP3, putative\tTb11.01.5500\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13930\tTb927.11.13930\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tU3 small nucleolar ribonucleoprotein protein IMP3, putative\tTb11.01.5500\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13930\tTb927.11.13930\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tU3 small nucleolar ribonucleoprotein protein IMP3, putative\tTb11.01.5500\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13930\tTb927.11.13930\t\tGO:0030490\tGO_REF:0000012\tISA\tUniProtKB:P32899\tP\tU3 small nucleolar ribonucleoprotein protein IMP3, putative\tTb11.01.5500\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13940\tTb927.11.13940\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme E2, putative\tTb11.01.5510\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13940\tTb927.11.13940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin-conjugating enzyme E2, putative\tTb11.01.5510\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13940\tTb927.11.13940\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\tTb11.01.5510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13950\tTb927.11.13950\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMut7-C RNAse domain containing protein, putative\tTb11.01.5530\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13960\tLSM4\t\tGO:0000365\tPMID:19429779\tIPI\tGeneDB:Tb927.7.3120\tP\tU6 snRNA-associated Sm-like protein LSm4p\tTb11.01.5535\tmRNA\ttaxon:185431\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13960\tLSM4\t\tGO:0000398\tGO_REF:0000011\tISM\tInterPro:IPR001163\tP\tU6 snRNA-associated Sm-like protein LSm4p\tTb11.01.5535\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13960\tLSM4\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR001163\tC\tU6 snRNA-associated Sm-like protein LSm4p\tTb11.01.5535\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13960\tLSM4\t\tGO:0005634\tPMID:19429779\tIPI\tGeneDB:Tb927\tC\tU6 snRNA-associated Sm-like protein LSm4p\tTb11.01.5535\tmRNA\ttaxon:185431\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13960\tLSM4\t\tGO:0005688\tPMID:14990572\tISA\tUniProtKB:P40070\tC\tU6 snRNA-associated Sm-like protein LSm4p\tTb11.01.5535\tmRNA\ttaxon:185431\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13960\tLSM4\t\tGO:0006397\tGO_REF:0000011\tISM\tInterPro:IPR006649\tP\tU6 snRNA-associated Sm-like protein LSm4p\tTb11.01.5535\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13960\tLSM4\t\tGO:0030629\tGO_REF:0000012\tISA\tUniProtKB:LSM4_YEAST\tF\tU6 snRNA-associated Sm-like protein LSm4p\tTb11.01.5535\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13970\tPAN3\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tPab1p-dependent poly(A) ribonuclease subunit, putative\tTb11.01.5540\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13980\tODA7\t\tGO:0044297\tPMID:19944405\tIDA\t\tC\tComponent of motile flagella 65\tTb11.01.5550|CMF65\tmRNA\ttaxon:185431\t20150625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13980\tODA7\t\tGO:0044458\tPMID:19944405\tIMP\t\tP\tComponent of motile flagella 65\tTb11.01.5550|CMF65\tmRNA\ttaxon:185431\t20150625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13980\tODA7\t\tGO:0044458\tGO_REF:0000002\tISO\tUniProtKB:DAAF1_CHLRE\tP\tComponent of motile flagella 65\tTb11.01.5550|CMF65\tmRNA\ttaxon:185431\t20150625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13980\tODA7\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tComponent of motile flagella 65\tTb11.01.5550|CMF65\tmRNA\ttaxon:185431\t20090527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13990\tGMER\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tGDP-L-fucose synthetase\tTb11.01.5560\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13990\tGMER\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tGDP-L-fucose synthetase\tTb11.01.5560\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13990\tGMER\t\tGO:0042351\tPMID:17640865\tIDA\t\tP\tGDP-L-fucose synthetase\tTb11.01.5560\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13990\tGMER\t\tGO:0042351\tGO_REF:0000012\tISA\tUniProtKB:Q9W1X8\tP\tGDP-L-fucose synthetase\tTb11.01.5560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13990\tGMER\t\tGO:0042356\tGO_REF:0000012\tISA\tUniProtKB:Q9W1X8\tF\tGDP-L-fucose synthetase\tTb11.01.5560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13990\tGMER\t\tGO:0050577\tPMID:17640865\tIDA\t\tF\tGDP-L-fucose synthetase\tTb11.01.5560\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.140\tTb927.11.140\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.03.0990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.140\tTb927.11.140\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.03.0990\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.140\tTb927.11.140\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.03.0990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.140\tTb927.11.140\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.03.0990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1400\tTb927.11.1400\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.47.0009\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14000\tNRBD1\t\tGO:0003723\tPMID:9247926\tIDA\t\tF\tnuclear RNA binding domain 1\tTb11.01.5570|p34\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14000\tNRBD1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tnuclear RNA binding domain 1\tTb11.01.5570|p34\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14000\tNRBD1\t\tGO:0005515\tPMID:30993866\tIPI\tGeneDB:Tb927.10.2370\tF\tnuclear RNA binding domain 1\tTb11.01.5570|p34\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14000\tNRBD1\t\tGO:0005515\tPMID:12076772\tIPI\tGeneDB:Tb927.8.760\tF\tnuclear RNA binding domain 1\tTb11.01.5570|p34\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14000\tNRBD1\t\tGO:0005634\tPMID:9574912\tIDA\t\tC\tnuclear RNA binding domain 1\tTb11.01.5570|p34\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14000\tNRBD1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tnuclear RNA binding domain 1\tTb11.01.5570|p34\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14000\tNRBD1\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tnuclear RNA binding domain 1\tTb11.01.5570|p34\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14010\tTb927.11.14010\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5580\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14020\tNRBD2\t\tGO:0003723\tPMID:9247926\tIDA\t\tF\tnuclear RNA binding domain 2\tTb11.01.5590|p37\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14020\tNRBD2\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tnuclear RNA binding domain 2\tTb11.01.5590|p37\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14020\tNRBD2\t\tGO:0005515\tPMID:12076772\tIPI\tGeneDB:Tb927.8.760\tF\tnuclear RNA binding domain 2\tTb11.01.5590|p37\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14020\tNRBD2\t\tGO:0005515\tPMID:30993866\tIPI\tGeneDB:Tb927.10.2370\tF\tnuclear RNA binding domain 2\tTb11.01.5590|p37\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14020\tNRBD2\t\tGO:0005634\tPMID:9574912\tIDA\t\tC\tnuclear RNA binding domain 2\tTb11.01.5590|p37\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14020\tNRBD2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tnuclear RNA binding domain 2\tTb11.01.5590|p37\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14020\tNRBD2\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tnuclear RNA binding domain 2\tTb11.01.5590|p37\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14030\tCYC9\t\tGO:0005515\tPMID:23805309\tIPI\tGeneDB:Tb927.11.12310\tF\tcyclin 9\tTb11.01.5600\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14030\tCYC9\t\tGO:0016301\tGO_REF:0000012\tISA\tUniProtKB:O88874\tF\tcyclin 9\tTb11.01.5600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14030\tCYC9\t\tGO:1902412\tPMID:23805309\tIMP\t\tP\tcyclin 9\tTb11.01.5600\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14040\tTb927.11.14040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRIC1, putative\tTb11.01.5610\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14050\tTb927.11.14050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5630\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14050\tTb927.11.14050\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5630\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14050\tTb927.11.14050\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5630\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14060\tTb927.11.14060\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5640\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0005886\tPMID:24453978\tIDA\t\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0005929\tPMID:24453978\tIDA\t\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0016021\tGO_REF:0000002\tISS\t\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0044145\tPMID:24453978\tIMP\t\tP\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14080\tCYC2\t\tGO:0000278\tPMID:10722661\tTAS\t\tP\tcyclin 2\tTb11.01.5660\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14080\tCYC2\t\tGO:0000307\tPMID:10722661\tIDA\t\tC\tcyclin 2\tTb11.01.5660\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14080\tCYC2\t\tGO:0005515\tPMID:10722661\tIPI\tGeneDB:Tb927.10.4990\tF\tcyclin 2\tTb11.01.5660\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14080\tCYC2\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tcyclin 2\tTb11.01.5660\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14080\tCYC2\t\tGO:0016538\tPMID:10722661\tIGI\tUniProtKB:CG12_YEAST\tF\tcyclin 2\tTb11.01.5660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14080\tCYC2\t\tGO:0030332\tPMID:10722661\tIDA\t\tF\tcyclin 2\tTb11.01.5660\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14090\tDRBD18\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tDouble RNA binding domain protein 18\tTb11.01.5680\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14090\tDRBD18\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDouble RNA binding domain protein 18\tTb11.01.5680\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14090\tDRBD18\t\tGO:0005634\tPMID:35793904\tIDA\t\tC\tDouble RNA binding domain protein 18\tTb11.01.5680\tmRNA\ttaxon:185431\t20220831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14090\tDRBD18\t\tGO:0005737\tPMID:25940618\tIDA\t\tC\tDouble RNA binding domain protein 18\tTb11.01.5680\tmRNA\ttaxon:185431\t20170320\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14090\tDRBD18\t\tGO:0005829\tPMID:35793904\tIDA\t\tC\tDouble RNA binding domain protein 18\tTb11.01.5680\tmRNA\ttaxon:185431\t20220831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14090\tDRBD18\t\tGO:0006397\tPMID:35793904\tIMP\t\tP\tDouble RNA binding domain protein 18\tTb11.01.5680\tmRNA\ttaxon:185431\t20220831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1410\tCITFA-3\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tclass I transcription factor A, subunit 3\tTb11.47.0008\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1410\tCITFA-3\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tclass I transcription factor A, subunit 3\tTb11.47.0008\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1410\tCITFA-3\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tclass I transcription factor A, subunit 3\tTb11.47.0008\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0000365\tPMID:19218552\tIMP\t\tP\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20190104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0005634\tPMID:19218552\tIDA\t\tC\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20190104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0005737\tPMID:19218552\tIDA\t\tC\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20190104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0010494\tPMID:26187993\tIDA\t\tC\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14100\tDRBD4\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tDouble RNA-binding domain containing protein 4\tPTB2|Tb11.01.5690\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14110\tTSP2\t\tGO:0003700\tPMID:19386623\tIDA\t\tF\tTFIIH basal transcription factor subunit\tTb11.01.5700\tmRNA\ttaxon:185431\t20100916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14110\tTSP2\t\tGO:0005634\tPMID:19386623\tIDA\t\tC\tTFIIH basal transcription factor subunit\tTb11.01.5700\tmRNA\ttaxon:185431\t20100916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14110\tTSP2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tTFIIH basal transcription factor subunit\tTb11.01.5700\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14110\tTSP2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor subunit\tTb11.01.5700\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14110\tTSP2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor subunit\tTb11.01.5700\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14120\tTb927.11.14120\t\tGO:0004826\tGO_REF:0000011\tISM\tInterPro:IPR002319\tF\tphenylalanyl-tRNA synthetase alpha chain, putative\tTb11.01.5710\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14120\tTb927.11.14120\t\tGO:0005737\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00468\tC\tphenylalanyl-tRNA synthetase alpha chain, putative\tTb11.01.5710\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14120\tTb927.11.14120\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphenylalanyl-tRNA synthetase alpha chain, putative\tTb11.01.5710\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14120\tTb927.11.14120\t\tGO:0006432\tGO_REF:0000011\tISM\tInterPro:IPR002319\tP\tphenylalanyl-tRNA synthetase alpha chain, putative\tTb11.01.5710\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14130\tTb927.11.14130\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tribosomal protein L18, putative\tTb11.01.5720\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14130\tTb927.11.14130\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002670\tF\tribosomal protein L18, putative\tTb11.01.5720\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14130\tTb927.11.14130\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tribosomal protein L18, putative\tTb11.01.5720\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14130\tTb927.11.14130\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tribosomal protein L18, putative\tTb11.01.5720\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14130\tTb927.11.14130\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002670\tC\tribosomal protein L18, putative\tTb11.01.5720\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14130\tTb927.11.14130\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002670\tP\tribosomal protein L18, putative\tTb11.01.5720\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14140\tECT\t\tGO:0004306\tPMID:18587155\tIMP\t\tF\tethanolamine-phosphate cytidylyltransferase\tTb11.01.5730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14140\tECT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tethanolamine-phosphate cytidylyltransferase\tTb11.01.5730\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14140\tECT\t\tGO:0005829\tPMID:19555461\tIDA\t\tC\tethanolamine-phosphate cytidylyltransferase\tTb11.01.5730\tmRNA\ttaxon:185431\t20090630\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14140\tECT\t\tGO:0006646\tPMID:18587155\tIMP\t\tP\tethanolamine-phosphate cytidylyltransferase\tTb11.01.5730\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14140\tECT\t\tGO:0008654\tGO_REF:0000012\tISA\tUniProtKB:O88637\tP\tethanolamine-phosphate cytidylyltransferase\tTb11.01.5730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14140\tECT\t\tGO:0046335\tPMID:20382188\tEXP\t\tP\tethanolamine-phosphate cytidylyltransferase\tTb11.01.5730\tmRNA\ttaxon:185431\t20100813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14140\tECT\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tethanolamine-phosphate cytidylyltransferase\tTb11.01.5730\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14150\tSNT309\t\tGO:0000365\tPMID:25524563\tIPI\tGeneDB:Tb927.2.5240\tP\tpre-mRNA splicing factor, putative\tTb11.01.5740\tmRNA\ttaxon:185431\t20160811\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14150\tSNT309\t\tGO:0005634\tPMID:25524563\tIPI\tGeneDB:Tb927.2.5240\tC\tpre-mRNA splicing factor, putative\tTb11.01.5740\tmRNA\ttaxon:185431\t20160811\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14150\tSNT309\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpre-mRNA splicing factor, putative\tTb11.01.5740\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14170\tTb927.11.14170\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5760\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14170\tTb927.11.14170\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5760\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14190\tTDR1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tTudor domain protein 1\tTb11.01.5780\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14190\tTDR1\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tTudor domain protein 1\tTb11.01.5780\tmRNA\ttaxon:185431\t20220207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14190\tTDR1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTudor domain protein 1\tTb11.01.5780\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14190\tTDR1\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tTudor domain protein 1\tTb11.01.5780\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14190\tTDR1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tTudor domain protein 1\tTb11.01.5780\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14200\tCDC34\t\tGO:0000910\tPMID:28609481\tIMP\t\tP\tubiquitin-conjugating enzyme CDC34\tTb11.01.5790\tmRNA\ttaxon:185431\t20190814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14200\tCDC34\t\tGO:0004842\tGO_REF:0000011\tISM\tInterPro:IPR000608\tF\tubiquitin-conjugating enzyme CDC34\tTb11.01.5790\tmRNA\ttaxon:185431\t20100715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14200\tCDC34\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin-conjugating enzyme CDC34\tTb11.01.5790\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14200\tCDC34\t\tGO:0005737\tPMID:28609481\tIDA\t\tC\tubiquitin-conjugating enzyme CDC34\tTb11.01.5790\tmRNA\ttaxon:185431\t20190814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14200\tCDC34\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme CDC34\tTb11.01.5790\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14210\tTb927.11.14210\t\tGO:0004198\tGO_REF:0000024\tISS\t\tF\tconserved protein\tTb11.01.5800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14210\tTb927.11.14210\t\tGO:0006508\tGO_REF:0000024\tISS\t\tP\tconserved protein\tTb11.01.5800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14220\tREG9.1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tRegulator of ESAG9-1\tTb11.01.5820\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14220\tREG9.1\t\tGO:0005737\tPMID:28334017\tIDA\t\tC\tRegulator of ESAG9-1\tTb11.01.5820\tmRNA\ttaxon:185431\t20190207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14220\tREG9.1\t\tGO:0010494\tPMID:28334017\tIDA\t\tC\tRegulator of ESAG9-1\tTb11.01.5820\tmRNA\ttaxon:185431\t20190207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14220\tREG9.1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tRegulator of ESAG9-1\tTb11.01.5820\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14220\tREG9.1\t\tGO:0020016\tPMID:28334017\tIDA\t\tC\tRegulator of ESAG9-1\tTb11.01.5820\tmRNA\ttaxon:185431\t20190207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14220\tREG9.1\t\tGO:0030154\tPMID:28334017\tIMP\t\tP\tRegulator of ESAG9-1\tTb11.01.5820\tmRNA\ttaxon:185431\t20190207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14240\tAHI1\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tWD domain, G-beta repeat, putative\tTb11.01.5850\tmRNA\ttaxon:185431\t20161202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14250\tTCP-1-epsilon\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tT-complex protein 1, epsilon subunit, putative\tTb11.01.5860\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14250\tTCP-1-epsilon\t\tGO:0005832\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tC\tT-complex protein 1, epsilon subunit, putative\tTb11.01.5860\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14250\tTCP-1-epsilon\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, epsilon subunit, putative\tTb11.01.5860\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14250\tTCP-1-epsilon\t\tGO:0051726\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, epsilon subunit, putative\tTb11.01.5860\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14260\tTb927.11.14260\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tatypical dual specificity phosphatase, putative\tTb11.01.5870\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14270\tTb927.11.14270\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSTE group serine/threonine-protein kinase, putative\tTb11.01.5880\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14270\tTb927.11.14270\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSTE group serine/threonine-protein kinase, putative\tTb11.01.5880\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14270\tTb927.11.14270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSTE group serine/threonine-protein kinase, putative\tTb11.01.5880\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14270\tTb927.11.14270\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE group serine/threonine-protein kinase, putative\tTb11.01.5880\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14280\tTb927.11.14280\t\tGO:0000917\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00172\tP\tseptum formation protein MAF homologue, putative\tTb11.01.5890\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14290\tTb927.11.14290\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tvacuolar sorting protein, putative\tTb11.01.5900\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14290\tTb927.11.14290\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q9UBQ0\tC\tvacuolar sorting protein, putative\tTb11.01.5900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14290\tTb927.11.14290\t\tGO:0015031\tGO_REF:0000012\tISA\tUniProtKB:Q9UBQ0\tP\tvacuolar sorting protein, putative\tTb11.01.5900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14290\tTb927.11.14290\t\tGO:0016020\tGO_REF:0000012\tISA\tUniProtKB:Q9UBQ0\tC\tvacuolar sorting protein, putative\tTb11.01.5900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14290\tTb927.11.14290\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:Q9UBQ0\tP\tvacuolar sorting protein, putative\tTb11.01.5900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14290\tTb927.11.14290\t\tGO:0016788\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00040\tF\tvacuolar sorting protein, putative\tTb11.01.5900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14290\tTb927.11.14290\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tvacuolar sorting protein, putative\tTb11.01.5900\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14290\tTb927.11.14290\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tvacuolar sorting protein, putative\tTb11.01.5900\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1430\tCMF2\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tRepeat of unknown function (DUF1126)/EF-hand domain pair, putative\tTb11.47.0006\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14300\tIC70\t\tGO:0003774\tGO_REF:0000012\tISA\tUniProtKB:Q9UI46\tF\tDynein intermediate chain, axonemal\tTb11.01.5910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14300\tIC70\t\tGO:0003777\tGO_REF:0000012\tISA\tUniProtKB:Q13409\tF\tDynein intermediate chain, axonemal\tTb11.01.5910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14300\tIC70\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.31.1060\tC\tDynein intermediate chain, axonemal\tTb11.01.5910\tmRNA\ttaxon:185431\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14300\tIC70\t\tGO:0030286\tGO_REF:0000012\tISA\tUniProtKB:Q13409\tC\tDynein intermediate chain, axonemal\tTb11.01.5910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0000365\tPMID:19429779\tIPI\tGeneDB:Tb927.7.3120\tP\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20160815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0000375\tGO_REF:0000011\tISM\tInterPro:IPR001163\tP\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0005634\tPMID:19429779\tIPI\tGeneDB:Tb927.7.3120\tC\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20160815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0005634\tGO_REF:0000011\tISM\tPfam:PF01423\tC\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0005732\tGO_REF:0000011\tISM\tPfam:PF01423\tC\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0008380\tGO_REF:0000011\tISM\tInterPro:IPR001163\tP\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0045291\tGO_REF:0000012\tISA\tUniProtKB:RUXG_YEAST\tP\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0097525\tPMID:19429779\tIPI\tGeneDB:Tb927.7.3120\tC\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20160815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14320\tTb927.11.14320\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5920\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14330\tTb927.11.14330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tHECT-domain (ubiquitin-transferase), putative\tTb11.01.5930\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14340\tXPO1\t\tGO:0005643\tPMID:22366449\tIDA\t\tC\texportin 1\tTb11.01.5940\tmRNA\ttaxon:185431\t20210322\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14340\tXPO1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\texportin 1\tTb11.01.5940\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14340\tXPO1\t\tGO:0005737\tPMID:12684371\tIDA\t\tC\texportin 1\tTb11.01.5940\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14340\tXPO1\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\texportin 1\tTb11.01.5940\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14340\tXPO1\t\tGO:0051168\tPMID:12684371\tTAS\t\tP\texportin 1\tTb11.01.5940\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0005739\tGO_REF:0000002\tISS\t\tC\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20110718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20110718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20100805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14370\tMAP103\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tMicrotubule-associated protein 103 kDa\tTb11.01.5970\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14370\tMAP103\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMicrotubule-associated protein 103 kDa\tTb11.01.5970\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14370\tMAP103\t\tGO:0005819\tGO_REF:0000109\tIDA\t\tC\tMicrotubule-associated protein 103 kDa\tTb11.01.5970\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14370\tMAP103\t\tGO:1990498\tPMID:29530930\tIDA\t\tC\tMicrotubule-associated protein 103 kDa\tTb11.01.5970\tmRNA\ttaxon:185431\t20180403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14380\tKPAF2\t\tGO:0005515\tPMID:21474072\tIPI\tGeneDB:Tb927.2.3180\tF\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.5980\tmRNA\ttaxon:185431\t20140613\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14380\tKPAF2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.5980\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14380\tKPAF2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.5980\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14380\tKPAF2\t\tGO:0005739\tPMID:21474072\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.5980\tmRNA\ttaxon:185431\t20110531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14380\tKPAF2\t\tGO:0006378\tPMID:21474072\tIDA\t\tP\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.5980\tmRNA\ttaxon:185431\t20110531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14380\tKPAF2\t\tGO:0031124\tPMID:21474072\tIDA\t\tP\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.5980\tmRNA\ttaxon:185431\t20110531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14380\tKPAF2\t\tGO:0043022\tPMID:21474072\tIDA\t\tF\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.5980\tmRNA\ttaxon:185431\t20110531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14380\tKPAF2\t\tGO:0043488\tPMID:21474072\tIDA\t\tP\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.5980\tmRNA\ttaxon:185431\t20110531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14390\tTb927.11.14390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5990\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14390\tTb927.11.14390\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5990\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14390\tTb927.11.14390\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.5990\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1440\tTb927.11.1440\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.47.0005\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14400\tTb927.11.14400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6000\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14410\tTb927.11.14410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAnkyrin repeats (3 copies), putative\tTb11.01.6010\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14420\tTb927.11.14420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6020\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14430\tRPN12\t\tGO:0004175\tPMID:11854272\tIDA\t\tF\tproteasome regulatory non-ATP-ase subunit\tTb11.01.6030\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14430\tRPN12\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit\tTb11.01.6030\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14430\tRPN12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit\tTb11.01.6030\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14430\tRPN12\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit\tTb11.01.6030\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14430\tRPN12\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR006746\tP\tproteasome regulatory non-ATP-ase subunit\tTb11.01.6030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14440\tPPR8\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.6040\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14440\tPPR8\t\tGO:0005829\tPMID:17646387\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.6040\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14440\tPPR8\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.6040\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14440\tPPR8\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.6040\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14460\tTb927.11.14460\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001164\tF\tADP-ribosylation factor GTPase activating protein 1, putative\tTb11.01.6060\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14460\tTb927.11.14460\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR001164\tC\tADP-ribosylation factor GTPase activating protein 1, putative\tTb11.01.6060\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14460\tTb927.11.14460\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor GTPase activating protein 1, putative\tTb11.01.6060\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14460\tTb927.11.14460\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor GTPase activating protein 1, putative\tTb11.01.6060\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14470\tBBS9\t\tGO:0020018\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\tBardet-Biedl syndrome 9 protein\tTb11.01.6070\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14470\tBBS9\t\tGO:0030669\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\tBardet-Biedl syndrome 9 protein\tTb11.01.6070\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14470\tBBS9\t\tGO:0033572\tPMID:26721397\tIMP\t\tP\tBardet-Biedl syndrome 9 protein\tTb11.01.6070\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14470\tBBS9\t\tGO:0034464\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tC\tBardet-Biedl syndrome 9 protein\tTb11.01.6070\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14470\tBBS9\t\tGO:0060271\tPMID:26721397\tIMP\t\tP\tBardet-Biedl syndrome 9 protein\tTb11.01.6070\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14470\tBBS9\t\tGO:0060285\tPMID:26721397\tIMP\t\tP\tBardet-Biedl syndrome 9 protein\tTb11.01.6070\tmRNA\ttaxon:185431\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14480\tTb927.11.14480\t\tGO:0004197\tGO_REF:0000011\tISM\tInterPro:IPR001394\tF\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.01.6080\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14480\tTb927.11.14480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.01.6080\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14480\tTb927.11.14480\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.01.6080\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14480\tTb927.11.14480\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001394\tP\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.01.6080\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14490\tRPB7\t\tGO:0003899\tGO_REF:0000011\tISM\tInterPro:IPR005576\tF\tRNA polymerase subunit, putative\tTb11.01.6090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14490\tRPB7\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA polymerase subunit, putative\tTb11.01.6090\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14490\tRPB7\t\tGO:0006351\tGO_REF:0000011\tISM\tInterPro:IPR005576\tP\tRNA polymerase subunit, putative\tTb11.01.6090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0004591\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tF\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P20967\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0006554\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0006568\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0045252\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14520\tTb927.11.14520\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tPolypeptide deformylase 1\tTb11.01.6120\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14520\tTb927.11.14520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPolypeptide deformylase 1\tTb11.01.6120\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14520\tTb927.11.14520\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000181\tP\tPolypeptide deformylase 1\tTb11.01.6120\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14520\tTb927.11.14520\t\tGO:0008463\tGO_REF:0000011\tISM\tInterPro:IPR000181\tF\tPolypeptide deformylase 1\tTb11.01.6120\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14520\tTb927.11.14520\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tPolypeptide deformylase 1\tTb11.01.6120\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14530\tTb927.11.14530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tWLM domain containing protein, putative\tTb11.01.6130\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14530\tTb927.11.14530\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tWLM domain containing protein, putative\tTb11.01.6130\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14530\tTb927.11.14530\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tWLM domain containing protein, putative\tTb11.01.6130\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14550\tTb927.11.14550\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPPPDE putative peptidase domain containing protein, putative\tTb11.01.6150\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0000365\tPMID:26727667\tIMP\t\tP\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20161129\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR004871\tF\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR004871\tC\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0005847\tPMID:26727667\tIPI\tGeneDB:Tb927.11.12750\tC\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20161129\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0006378\tGO_REF:0000012\tISA\tUniProtKB:Q96AF0\tP\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20161129\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0006379\tGO_REF:0000012\tISA\tUniProtKB:Q96AF0\tP\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14570\tTb927.11.14570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLicD family, putative\tTb11.01.6180\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14570\tTb927.11.14570\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLicD family, putative\tTb11.01.6180\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\tNOT\tGO:0002134\tGO_REF:0000024\tISO\tEuPathDB:CFAC1_190023800\tF\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\t\tGO:0005525\tGO_REF:0000024\tISO\tEuPathDB:CFAC1_190023800\tF\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\t\tGO:0005737\tPMID:26038549\tIDA\t\tC\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\t\tGO:0008192\tGO_REF:0000024\tISO\tEuPathDB:CFAC1_190023800\tF\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\t\tGO:0008192\tPMID:26038549\tIDA\t\tF\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\t\tGO:0019002\tPMID:9671471\tIDA\t\tF\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\t\tGO:0036260\tGO_REF:0000024\tISO\tEuPathDB:CFAC1_190023800\tP\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\t\tGO:0036260\tPMID:26038549\tIDA\t\tP\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14580\tCE1\tNOT\tGO:0051736\tPMID:26038549\tIDA\t\tF\tRNA capping enzyme, cytoplasmic\tTb11.01.6190\tmRNA\ttaxon:185431\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14590\tG5-IP\t\tGO:0005515\tPMID:24839125\tIPI\tGeneDB:Tb927.8.4500\tF\tG5-interacting protein\tTb11.01.6200\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14590\tG5-IP\t\tGO:0005737\tPMID:24839125\tIDA\t\tC\tG5-interacting protein\tTb11.01.6200\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14590\tG5-IP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tG5-interacting protein\tTb11.01.6200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14590\tG5-IP\t\tGO:0016281\tPMID:24839125\tIPI\tGeneDB:Tb927.8.4500|GeneDB:Tb927.7.1670\tC\tG5-interacting protein\tTb11.01.6200\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14590\tG5-IP\t\tGO:0036260\tPMID:24839125\tTAS\t\tP\tG5-interacting protein\tTb11.01.6200\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1460\tTb927.11.1460\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR000306\tF\tphosphatidylinositol (3,5) kinase, putative\tTb11.47.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1460\tTb927.11.1460\t\tGO:0016308\tGO_REF:0000011\tISM\tInterPro:IPR002498\tF\tphosphatidylinositol (3,5) kinase, putative\tTb11.47.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14620\tTb927.11.14620\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\tTb11.01.6230|NCDS.Tb927.11.14611\tmRNA\ttaxon:185431\t20090310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14630\tTb927.11.14630\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR004179\tC\tATP-dependent DNA DEAD/DEAH box helicase, putative\tTb11.01.6260\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14630\tTb927.11.14630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DNA DEAD/DEAH box helicase, putative\tTb11.01.6260\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14630\tTb927.11.14630\t\tGO:0006139\tGO_REF:0000011\tISM\tInterPro:IPR001410\tP\tATP-dependent DNA DEAD/DEAH box helicase, putative\tTb11.01.6260\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14630\tTb927.11.14630\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DNA DEAD/DEAH box helicase, putative\tTb11.01.6260\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0000278\tPMID:33415107\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20210308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0007093\tPMID:33415107\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20210308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0016303\tPMID:20382188\tIMP\t\tF\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20100831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0034613\tPMID:31968257\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20200717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0034644\tPMID:31968257\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20200716\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0044819\tPMID:33415107\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20210308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0071479\tPMID:31968257\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20200716\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0071479\tPMID:33415107\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20210308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0072703\tPMID:31968257\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20200716\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0072711\tPMID:31968257\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20200716\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:1902412\tPMID:24453978\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20150217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14690\tTb927.11.14690\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMicrotubule-binding protein MIP-T3, putative\tTb11.01.6310\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1470\tTb927.11.1470\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t65 kDa invariant surface glycoprotein-like protein\tTb11.47.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14700\tTb927.11.14700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6320\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14700\tTb927.11.14700\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.6320\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14710\tTb927.11.14710\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\trRNA processing, putative\tTb11.01.6340\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14710\tTb927.11.14710\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\trRNA processing, putative\tTb11.01.6340\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14710\tTb927.11.14710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\trRNA processing, putative\tTb11.01.6340\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14710\tTb927.11.14710\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\trRNA processing, putative\tTb11.01.6340\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14710\tTb927.11.14710\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\trRNA processing, putative\tTb11.01.6340\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14720\tTb927.11.14720\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6350\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14730\tFtsH14\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMetalloprotease M41 FtsH, putative\tTb11.01.6360\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14730\tFtsH14\t\tGO:0005743\tPMID:32437726\tIDA\t\tC\tMetalloprotease M41 FtsH, putative\tTb11.01.6360\tmRNA\ttaxon:185431\t20220106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14730\tFtsH14\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tMetalloprotease M41 FtsH, putative\tTb11.01.6360\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14730\tFtsH14\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR000642\tP\tMetalloprotease M41 FtsH, putative\tTb11.01.6360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14730\tFtsH14\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tMetalloprotease M41 FtsH, putative\tTb11.01.6360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14730\tFtsH14\t\tGO:0016887\tGO_REF:0000011\tISM\tPfam:PF00004\tF\tMetalloprotease M41 FtsH, putative\tTb11.01.6360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14750\tTb927.11.14750\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tPSP1 C-terminal conserved region, putative\tTb11.01.6380\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14750\tTb927.11.14750\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tPSP1 C-terminal conserved region, putative\tTb11.01.6380\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14750\tTb927.11.14750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPSP1 C-terminal conserved region, putative\tTb11.01.6380\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14750\tTb927.11.14750\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tPSP1 C-terminal conserved region, putative\tTb11.01.6380\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14760\tTb927.11.14760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tClustered mitochondria/Translation initiation factor eIF3 subunit 135, putative\tTb11.01.6390\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14780\tPMI\t\tGO:0004476\tGO_REF:0000011\tISM\tPfam:PF01238\tF\tphosphomannose isomerase\tTb11.01.6410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14780\tPMI\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tphosphomannose isomerase\tTb11.01.6410\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14780\tPMI\t\tGO:0005737\tPMID:11084042\tISS\t\tC\tphosphomannose isomerase\tTb11.01.6410\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14780\tPMI\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphomannose isomerase\tTb11.01.6410\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14780\tPMI\t\tGO:0005975\tGO_REF:0000011\tISM\tPfam:PF01238\tP\tphosphomannose isomerase\tTb11.01.6410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14780\tPMI\t\tGO:0020015\tPMID:22375793\tIDA\t\tC\tphosphomannose isomerase\tTb11.01.6410\tmRNA\ttaxon:185431\t20170215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14780\tPMI\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tphosphomannose isomerase\tTb11.01.6410\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14780\tPMI\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tphosphomannose isomerase\tTb11.01.6410\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0000287\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0000723\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0004003\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0005524\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0005739\tPMID:19646907\tIDA\t\tC\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20090805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0006310\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0051276\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1480\tTb927.11.1480\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.27.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1480\tTb927.11.1480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.27.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1480\tTb927.11.1480\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.27.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1480\tTb927.11.1480\t\tGO:0097542\tPMID:33104188\tIDA\t\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.27.0001\tmRNA\ttaxon:185431\t20220225\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14800\tTb927.11.14800\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.01.6430\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14800\tTb927.11.14800\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6430\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14810\tTb927.11.14810\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6440\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14810\tTb927.11.14810\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6440\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14810\tTb927.11.14810\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6440\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14810\tTb927.11.14810\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6440\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14820\tTb927.11.14820\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6450\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14830\tTb927.11.14830\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6460\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14830\tTb927.11.14830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6460\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14830\tTb927.11.14830\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6460\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14830\tTb927.11.14830\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6460\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0000281\tPMID:18545648\tIMP\t\tP\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20090908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0005515\tPMID:19043568\tIPI\tGeneDB:Tb927.4.5180\tF\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20090909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0005515\tPMID:18545648\tIPI\tGeneDB:Tb927.6.4820\tF\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20090908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0005876\tPMID:19714224\tIDA\t\tC\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20091021\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0007059\tPMID:18545648\tIMP\t\tP\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20090908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0032133\tPMID:18545648\tIDA\t\tC\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20090908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0033047\tPMID:19043568\tIMP\t\tP\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20090908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14840\tCPC2\t\tGO:0051225\tPMID:18545648\tIMP\t\tP\tchromosomal passenger complex 2\tTb11.01.6470|PNT2\tmRNA\ttaxon:185431\t20090903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14850\tTb927.11.14850\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6480\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14860\tTb927.11.14860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6490\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14860\tTb927.11.14860\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6490\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14860\tTb927.11.14860\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6490\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14860\tTb927.11.14860\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6490\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14860\tTb927.11.14860\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6490\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14870\tTb927.11.14870\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNAD+ synthase, putative\tTb11.01.6500\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14870\tTb927.11.14870\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tNAD+ synthase, putative\tTb11.01.6500\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14880\tPFC9\t\tGO:0005929\tPMID:19074134\tIGI\tGeneDB:Tb927.8.4970|GeneDB:Tb927.8.4980|GeneDB:Tb927.8.4990|GeneDB:Tb927.8.5000|GeneDB:Tb927.8.5010\tC\tParaflagellar Rod Proteome Component 9, putative\tTb11.01.6510\tmRNA\ttaxon:185431\t20150511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14880\tPFC9\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tParaflagellar Rod Proteome Component 9, putative\tTb11.01.6510\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14890\tTb927.11.14890\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA polymerase alpha/epsilon subunit B, putative\tTb11.01.6520\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14890\tTb927.11.14890\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA polymerase alpha/epsilon subunit B, putative\tTb11.01.6520\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14900\tCOPE\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:IPR006822\tC\tcoatomer subunit epsilon\tTb11.01.6530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14900\tCOPE\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tcoatomer subunit epsilon\tTb11.01.6530\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14900\tCOPE\t\tGO:0006886\tGO_REF:0000011\tISM\tInterPro:IPR006822\tP\tcoatomer subunit epsilon\tTb11.01.6530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14900\tCOPE\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR006822\tC\tcoatomer subunit epsilon\tTb11.01.6530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14910\tTb927.11.14910\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2C, putative\tTb11.01.6540\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14910\tTb927.11.14910\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein phosphatase 2C, putative\tTb11.01.6540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14910\tTb927.11.14910\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\tTb11.01.6540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14910\tTb927.11.14910\t\tGO:0016791\tGO_REF:0000011\tISM\tPfam:PF00481\tF\tprotein phosphatase 2C, putative\tTb11.01.6540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14920\tTb927.11.14920\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\tTb11.01.6550\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14930\tTb927.11.14930\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6570\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14930\tTb927.11.14930\t\tGO:0120121\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6570\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14940\tTb927.11.14940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6580\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14940\tTb927.11.14940\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.6580\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14950\tZFP2\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR000571\tF\tzinc finger protein 2\tTb11.01.6590\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14950\tZFP2\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein 2\tTb11.01.6590\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14950\tZFP2\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tzinc finger protein 2\tTb11.01.6590\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14950\tZFP2\t\tGO:0005737\tPMID:11726506\tIC\tGO:0046785\tC\tzinc finger protein 2\tTb11.01.6590\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14950\tZFP2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein 2\tTb11.01.6590\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14950\tZFP2\t\tGO:0030154\tPMID:11726506\tIMP\t\tP\tzinc finger protein 2\tTb11.01.6590\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14950\tZFP2\t\tGO:0046785\tPMID:11726506\tTAS\t\tP\tzinc finger protein 2\tTb11.01.6590\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR001313\tF\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0005515\tPMID:20153321\tIPI\tGeneDB:Tb927.8.2000\tF\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20100610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0005730\tPMID:20153321\tIDA\t\tC\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20100610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0006364\tPMID:20153321\tIMP\t\tP\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20100610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0016071\tGO_REF:0000011\tISM\tInterPro:IPR001313\tP\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14960\tPUF7\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tpumilio/PUF RNA binding protein 7, putative\tTb11.01.6600\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14970\tTb927.11.14970\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6610\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14970\tTb927.11.14970\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6610\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14980\tMRPL38\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tphosphatidylethanolamine-binding protein, putative\tTb11.01.6620\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14980\tMRPL38\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tphosphatidylethanolamine-binding protein, putative\tTb11.01.6620\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14980\tMRPL38\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tphosphatidylethanolamine-binding protein, putative\tTb11.01.6620\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14980\tMRPL38\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tphosphatidylethanolamine-binding protein, putative\tTb11.01.6620\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14990\tTb927.11.14990\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6630\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14990\tTb927.11.14990\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6630\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14990\tTb927.11.14990\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6630\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.150\tTb927.11.150\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.03.0970\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.150\tTb927.11.150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.03.0970\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.150\tTb927.11.150\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.03.0970\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.150\tTb927.11.150\t\tGO:0097542\tPMID:33104188\tIDA\t\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.03.0970\tmRNA\ttaxon:185431\t20220225\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15000\tTbSMN\t\tGO:0005515\tPMID:20592024\tIPI\tGeneDB:Tb927.2.4540\tF\tsurvival of motor neuron (SMN)-like protein\tTb11.01.6640\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15000\tTbSMN\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tsurvival of motor neuron (SMN)-like protein\tTb11.01.6640\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15000\tTbSMN\t\tGO:0005634\tPMID:19605687\tIDA\t\tC\tsurvival of motor neuron (SMN)-like protein\tTb11.01.6640\tmRNA\ttaxon:185431\t20090722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15000\tTbSMN\t\tGO:0005654\tPMID:19605687\tIDA\t\tC\tsurvival of motor neuron (SMN)-like protein\tTb11.01.6640\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15000\tTbSMN\t\tGO:0008380\tPMID:19605687\tIMP\t\tP\tsurvival of motor neuron (SMN)-like protein\tTb11.01.6640\tmRNA\ttaxon:185431\t20160817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15000\tTbSMN\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tsurvival of motor neuron (SMN)-like protein\tTb11.01.6640\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15000\tTbSMN\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tsurvival of motor neuron (SMN)-like protein\tTb11.01.6640\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15010\tNEK21\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSerine/threonine-protein kinase NEK21, putative\tTb11.01.6650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15010\tNEK21\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSerine/threonine-protein kinase NEK21, putative\tTb11.01.6650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15010\tNEK21\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSerine/threonine-protein kinase NEK21, putative\tTb11.01.6650\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15010\tNEK21\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK21, putative\tTb11.01.6650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15010\tNEK21\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSerine/threonine-protein kinase NEK21, putative\tTb11.01.6650\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15020\tSODB2\t\tGO:0004784\tGO_REF:0000011\tISM\tInterPro:IPR001189\tF\tiron superoxide dismutase\tTb11.01.6660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15020\tSODB2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tiron superoxide dismutase\tTb11.01.6660\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15020\tSODB2\t\tGO:0005829\tPMID:16413404\tIDA\t\tC\tiron superoxide dismutase\tTb11.01.6660\tmRNA\ttaxon:185431\t20170810\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15020\tSODB2\t\tGO:0006801\tGO_REF:0000011\tISM\tInterPro:IPR001189\tP\tiron superoxide dismutase\tTb11.01.6660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15020\tSODB2\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tiron superoxide dismutase\tTb11.01.6660\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15020\tSODB2\t\tGO:0020015\tPMID:16413403\tIDA\t\tC\tiron superoxide dismutase\tTb11.01.6660\tmRNA\ttaxon:185431\t20090714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15020\tSODB2\t\tGO:0020015\tPMID:16413404\tIDA\t\tC\tiron superoxide dismutase\tTb11.01.6660\tmRNA\ttaxon:185431\t20170810\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15020\tSODB2\t\tGO:0046872\tGO_REF:0000011\tISM\tInterPro:IPR001189\tF\tiron superoxide dismutase\tTb11.01.6660\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15030\tX3\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tsmall GTPase\tTb11.01.6670\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15030\tX3\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tsmall GTPase\tTb11.01.6670\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15030\tX3\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tsmall GTPase\tTb11.01.6670\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15030\tX3\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tsmall GTPase\tTb11.01.6670\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P19882\tC\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:CH60_MOUSE\tF\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15050\tTb927.11.15050\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tCation efflux family, putative\tTb11.01.6690\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15050\tTb927.11.15050\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tCation efflux family, putative\tTb11.01.6690\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15070\tBBP119\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tBasal body protein\tTb11.01.6710\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15070\tBBP119\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\tTb11.01.6710\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15070\tBBP119\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\tTb11.01.6710\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15080\tTb927.11.15080\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tTransmembrane proteins 14C, putative\tTb11.01.6715\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15080\tTb927.11.15080\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tTransmembrane proteins 14C, putative\tTb11.01.6715\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15100\tTb927.11.15100\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tTb5.20\tTb11.01.6740\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15100\tTb927.11.15100\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tTb5.20\tTb11.01.6740\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15100\tTb927.11.15100\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tTb5.20\tTb11.01.6740\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15110\tTb927.11.15110\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tVitamin B6 photo-protection and homoeostasis, putative\tTb11.01.6760\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15110\tTb927.11.15110\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tVitamin B6 photo-protection and homoeostasis, putative\tTb11.01.6760\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15130\tJ7\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\theat shock protein-like protein, putative\tTb11.01.6780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15130\tJ7\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\theat shock protein-like protein, putative\tTb11.01.6780\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15140\tCAP62\t\tGO:0005856\tPMID:35447115\tIDA\t\tC\tCytoskeleton-associated protein 62 kDa\tTb11.01.6790\tmRNA\ttaxon:185431\t20220423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15140\tCAP62\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tCytoskeleton-associated protein 62 kDa\tTb11.01.6790\tmRNA\ttaxon:185431\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15140\tCAP62\t\tGO:0120120\tPMID:26504079\tIDA\t\tC\tCytoskeleton-associated protein 62 kDa\tTb11.01.6790\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15150\tTb927.11.15150\t\tGO:0003841\tPMID:20382188\tEXP\t\tF\t1-acyl-sn-glycerol-3-phosphate acyltransferase, putative\tTb11.01.6800\tmRNA\ttaxon:185431\t20100803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15150\tTb927.11.15150\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002123\tP\t1-acyl-sn-glycerol-3-phosphate acyltransferase, putative\tTb11.01.6800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15150\tTb927.11.15150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t1-acyl-sn-glycerol-3-phosphate acyltransferase, putative\tTb11.01.6800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15160\tTb927.11.15160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6820\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15170\ttsr3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tribosome biogenesis protein TSR3, putative\tTb11.01.6830\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15170\ttsr3\t\tGO:0030490\tGO_REF:0000002\tISS\tUniProtKB:TSR3_YEAST\tP\tribosome biogenesis protein TSR3, putative\tTb11.01.6830\tmRNA\ttaxon:185431\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15170\ttsr3\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tribosome biogenesis protein TSR3, putative\tTb11.01.6830\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15170\ttsr3\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tribosome biogenesis protein TSR3, putative\tTb11.01.6830\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15180\tTb927.11.15180\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6835\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15180\tTb927.11.15180\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6835\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15190\tTb927.11.15190\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4200), putative\tTb11.01.6840\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15190\tTb927.11.15190\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4200), putative\tTb11.01.6840\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1520\tTb927.11.1520\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 3 (ESAG3) protein, putative\tTb11.55.0028\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15200\tTb927.11.15200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6850\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15200\tTb927.11.15200\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6850\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15200\tTb927.11.15200\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6850\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15210\tESP16\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTLR4 regulator and MIR-interacting MSAP, putative\tTb11.01.6860\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15210\tESP16\tNOT\tGO:0009986\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15210\tC\tTLR4 regulator and MIR-interacting MSAP, putative\tTb11.01.6860\tmRNA\ttaxon:185431\t20150730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15220\tTb927.11.15220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15220\tTb927.11.15220\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15230\tTb927.11.15230\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tcytosolic coat protein, putative\tTb11.01.6880\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15230\tTb927.11.15230\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tcytosolic coat protein, putative\tTb11.01.6880\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15230\tTb927.11.15230\t\tGO:0006888\tGO_REF:0000012\tISA\tUniProtKB:O17528\tP\tcytosolic coat protein, putative\tTb11.01.6880\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15230\tTb927.11.15230\t\tGO:0008320\tGO_REF:0000011\tISM\tInterPro:IPR000348\tF\tcytosolic coat protein, putative\tTb11.01.6880\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15230\tTb927.11.15230\t\tGO:0012507\tGO_REF:0000012\tISA\tUniProtKB:O17528\tC\tcytosolic coat protein, putative\tTb11.01.6880\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15240\tRAB2B\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tRas-related protein RAB2B, putative\tTb11.01.6890\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15240\tRAB2B\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tRas-related protein RAB2B, putative\tTb11.01.6890\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15240\tRAB2B\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tRas-related protein RAB2B, putative\tTb11.01.6890\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15250\tTb927.11.15250\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6900\tmRNA\ttaxon:185431\t20161208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15270\tPPAT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphopantetheine adenylyltransferase, putative\tTb11.01.6920\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15270\tPPAT\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tphosphopantetheine adenylyltransferase, putative\tTb11.01.6920\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15270\tPPAT\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tphosphopantetheine adenylyltransferase, putative\tTb11.01.6920\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15270\tPPAT\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tphosphopantetheine adenylyltransferase, putative\tTb11.01.6920\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15280\tADAT3\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\ttRNA-sepcific adenosine deaminase\tTb11.01.6930\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15280\tADAT3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttRNA-sepcific adenosine deaminase\tTb11.01.6930\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15280\tADAT3\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR002125\tF\ttRNA-sepcific adenosine deaminase\tTb11.01.6930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15280\tADAT3\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:IPR002125\tF\ttRNA-sepcific adenosine deaminase\tTb11.01.6930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15290\tMtq2\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:MTQ2_SCHPO\tC\teRF1 methyltransferase catalytic subunit, putative\tTb11.01.6940\tmRNA\ttaxon:185431\t20140606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15290\tMtq2\t\tGO:0006417\tGO_REF:0000012\tISA\tUniProtKB:MTQ2_YEAST\tP\teRF1 methyltransferase catalytic subunit, putative\tTb11.01.6940\tmRNA\ttaxon:185431\t20140606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15290\tMtq2\t\tGO:0008276\tGO_REF:0000012\tISA\tUniProtKB:HEMK2_HUMAN\tF\teRF1 methyltransferase catalytic subunit, putative\tTb11.01.6940\tmRNA\ttaxon:185431\t20140606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1530\tTb927.11.1530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\texpression site-associated gene 3 (ESAG3) protein, putative\tTb11.55.0027\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1530\tTb927.11.1530\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 3 (ESAG3) protein, putative\tTb11.55.0027\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15300\tTb927.11.15300\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6950\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15300\tTb927.11.15300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6950\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15300\tTb927.11.15300\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.6950\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15300\tTb927.11.15300\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.6950\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15330\tTb927.11.15330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphatidylinositol 3-kinase catalytic subunit, putative\tTb11.01.6980\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15330\tTb927.11.15330\t\tGO:0016773\tGO_REF:0000011\tISM\tInterPro:IPR000403\tF\tphosphatidylinositol 3-kinase catalytic subunit, putative\tTb11.01.6980\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15330\tTb927.11.15330\t\tGO:0051726\tGO_REF:0000012\tISA\tUniProtKB:P42338\tP\tphosphatidylinositol 3-kinase catalytic subunit, putative\tTb11.01.6980\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15350\tRBP39\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, putative\tTb11.01.7000\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15350\tRBP39\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.01.7000\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15350\tRBP39\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.01.7000\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15360\tTb927.11.15360\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7005\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15390\tTb927.11.15390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.7040\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1540\tIVDH\t\tGO:0003995\tGO_REF:0000011\tISM\tInterPro:IPR006091\tF\tisovaleryl-CoA dehydrogenase\tTb11.55.0026\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1540\tIVDH\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tisovaleryl-CoA dehydrogenase\tTb11.55.0026\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1540\tIVDH\t\tGO:0005739\tPMID:29813135\tIDA\t\tC\tisovaleryl-CoA dehydrogenase\tTb11.55.0026\tmRNA\ttaxon:185431\t20180809\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1540\tIVDH\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tisovaleryl-CoA dehydrogenase\tTb11.55.0026\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1540\tIVDH\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tisovaleryl-CoA dehydrogenase\tTb11.55.0026\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1540\tIVDH\t\tGO:0016491\tGO_REF:0000011\tISM\tInterPro:IPR006090\tF\tisovaleryl-CoA dehydrogenase\tTb11.55.0026\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15400\tTb927.11.15400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsynaptobrevin, putative\tTb11.01.7050\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15400\tTb927.11.15400\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tsynaptobrevin, putative\tTb11.01.7050\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15410\tTb927.11.15410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7060\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15420\tEIF3K\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\teukaryotic translation initiation factor 3 subunit k\tTb11.01.7070\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15420\tEIF3K\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LmjF.32.2180\tC\teukaryotic translation initiation factor 3 subunit k\tTb11.01.7070\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15420\tEIF3K\t\tGO:0005852\tGO_REF:0000024\tISO\tGeneDB:LmjF.32.2180\tC\teukaryotic translation initiation factor 3 subunit k\tTb11.01.7070\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15430\tTb927.11.15430\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR000795\tF\tU5 small nuclear ribonucleoprotein component, putative\tTb11.01.7080\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15430\tTb927.11.15430\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tU5 small nuclear ribonucleoprotein component, putative\tTb11.01.7080\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15430\tTb927.11.15430\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:O08810\tC\tU5 small nuclear ribonucleoprotein component, putative\tTb11.01.7080\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15430\tTb927.11.15430\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tU5 small nuclear ribonucleoprotein component, putative\tTb11.01.7080\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15430\tTb927.11.15430\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000795\tP\tU5 small nuclear ribonucleoprotein component, putative\tTb11.01.7080\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15440\tTAP151\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.7090|LIR\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15440\tTAP151\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.7090|LIR\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15440\tTAP151\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15810\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.7090|LIR\tmRNA\ttaxon:185431\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15450\tBBP270\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\tTb11.01.7095\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15460\tTb927.11.15460\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.7100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15460\tTb927.11.15460\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.7100\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15460\tTb927.11.15460\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.7100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15460\tTb927.11.15460\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.7100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15470\tTb927.11.15470\t\tGO:0004479\tPMID:11792845\tIDA\t\tF\tmethionyl-tRNA formyltransferase\tTb11.01.7110\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15470\tTb927.11.15470\t\tGO:0005739\tPMID:11792845\tIDA\t\tC\tmethionyl-tRNA formyltransferase\tTb11.01.7110\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15470\tTb927.11.15470\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmethionyl-tRNA formyltransferase\tTb11.01.7110\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15470\tTb927.11.15470\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmethionyl-tRNA formyltransferase\tTb11.01.7110\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15470\tTb927.11.15470\t\tGO:0006431\tPMID:11792845\tTAS\t\tP\tmethionyl-tRNA formyltransferase\tTb11.01.7110\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15470\tTb927.11.15470\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmethionyl-tRNA formyltransferase\tTb11.01.7110\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15480\tACDP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\theat shock protein Hsp20, putative\tTb11.01.7120\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15480\tACDP\t\tGO:0009408\tPMID:23592996\tIEP\t\tP\theat shock protein Hsp20, putative\tTb11.01.7120\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15480\tACDP\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\theat shock protein Hsp20, putative\tTb11.01.7120\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15480\tACDP\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\theat shock protein Hsp20, putative\tTb11.01.7120\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15490\tTb927.11.15490\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTb-291 membrane associated protein, putative\tTb11.01.7130\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15490\tTb927.11.15490\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tTb-291 membrane associated protein, putative\tTb11.01.7130\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1550\tXRNF\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tXRN 5'-3' exonuclease N-terminus, putative\tTb11.55.0025\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15500\tTb927.11.15500\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.7140\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15500\tTb927.11.15500\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.7140\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15510\tTb927.11.15510\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7150\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15530\tTb927.11.15530\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tC-14 sterol reductase, putative\tTb11.01.7170\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15530\tTb927.11.15530\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tC-14 sterol reductase, putative\tTb11.01.7170\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15530\tTb927.11.15530\t\tGO:0006696\tGO_REF:0000011\tISM\tInterPro:IPR001171\tP\tC-14 sterol reductase, putative\tTb11.01.7170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15530\tTb927.11.15530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tC-14 sterol reductase, putative\tTb11.01.7170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15530\tTb927.11.15530\t\tGO:0050613\tGO_REF:0000011\tISM\tInterPro:IPR001171\tF\tC-14 sterol reductase, putative\tTb11.01.7170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15540\tTb927.11.15540\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7180\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15550\tB5R\t\tGO:0004128\tGO_REF:0000012\tISA\tUniProtKB:P36060\tF\tNADH-cytochrome b5 reductase, putative\tTb11.01.7190\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15550\tB5R\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADH-cytochrome b5 reductase, putative\tTb11.01.7190\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15550\tB5R\t\tGO:0055114\tGO_REF:0000011\tISM\tInterPro:IPR001433\tP\tNADH-cytochrome b5 reductase, putative\tTb11.01.7190\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15560\tNUP53a\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP53a\tTb11.01.7200\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15560\tNUP53a\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP53a\tTb11.01.7200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15560\tNUP53a\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP53a\tTb11.01.7200\tmRNA\ttaxon:185431\t20090616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15560\tNUP53a\t\tGO:0044613\tPMID:26891179\tIPI\tGeneDB:Tb927.4.5200\tC\tNucleoporin NUP53a\tTb11.01.7200\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15570\tTb927.11.15570\t\tGO:0005829\tPMID:17646387\tISM\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.7210\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15580\tTFL2\t\tGO:0005515\tPMID:29186511\tIPI\tGeneDB:Tb927.11.1040\tF\tTFIIF-like transcription factor subunit 2\tTb11.01.7220\tmRNA\ttaxon:185431\t20180404\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15580\tTFL2\t\tGO:0005634\tPMID:28727848|PMID:29186511\tIDA\t\tC\tTFIIF-like transcription factor subunit 2\tTb11.01.7220\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15580\tTFL2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTFIIF-like transcription factor subunit 2\tTb11.01.7220\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15590\tTb927.11.15590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7230\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15590\tTb927.11.15590\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7230\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15590\tTb927.11.15590\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7230\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1560\tTb927.11.1560\t\tGO:0005829\tPMID:18364711\tISO\tGeneDB:LmjF.20.0970\tC\t1,2-Dihydroxy-3-keto-5-methylthiopentene dioxygenase, putative\tTb11.55.0024\tmRNA\ttaxon:185431\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15600\tHDAC2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thistone deacetylase 2\tTb11.01.7240|HDO2\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15600\tHDAC2\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\thistone deacetylase 2\tTb11.01.7240|HDO2\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15600\tHDAC2\t\tGO:0005829\tPMID:20624217\tIDA\t\tC\thistone deacetylase 2\tTb11.01.7240|HDO2\tmRNA\ttaxon:185431\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15600\tHDAC2\t\tGO:0016575\tGO_REF:0000011\tISM\tInterPro:IPR000286\tP\thistone deacetylase 2\tTb11.01.7240|HDO2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15600\tHDAC2\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thistone deacetylase 2\tTb11.01.7240|HDO2\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15600\tHDAC2\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thistone deacetylase 2\tTb11.01.7240|HDO2\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15620\tTb927.11.15620\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7260\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15620\tTb927.11.15620\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.7260\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15630\tTb927.11.15630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNOL1/NOP2/sun family, putative\tTb11.01.7280\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15630\tTb927.11.15630\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tNOL1/NOP2/sun family, putative\tTb11.01.7280\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15630\tTb927.11.15630\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tNOL1/NOP2/sun family, putative\tTb11.01.7280\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0000963\tPMID:22396527\tIC\tGO:0031019\tP\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0003723\tPMID:22396527\tIDA\t\tF\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0016049\tPMID:30333188\tIMP\t\tP\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20190107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0016554\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0016787\tGO_REF:0000011\tISM\tPfam:PF00293\tF\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0043489\tPMID:30333188\tIMP\t\tP\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20190107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0048255\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15650\tTUT4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tterminal uridylyltransferase 4\tTb11.01.7300\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15650\tTUT4\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tterminal uridylyltransferase 4\tTb11.01.7300\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15650\tTUT4\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tterminal uridylyltransferase 4\tTb11.01.7300\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15650\tTUT4\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tterminal uridylyltransferase 4\tTb11.01.7300\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15660\tTb927.11.15660\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7310\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15660\tTb927.11.15660\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7310\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15660\tTb927.11.15660\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7310\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15680\tTb927.11.15680\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7325\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15680\tTb927.11.15680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7325\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15680\tTb927.11.15680\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7325\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15680\tTb927.11.15680\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7325\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15690\tTb927.11.15690\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tU5 snRNP-associated 102 kDa protein, putative\tTb11.01.7330\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15690\tTb927.11.15690\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tU5 snRNP-associated 102 kDa protein, putative\tTb11.01.7330\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1570\tTb927.11.1570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0023\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15700\tTb927.11.15700\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.7340\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15700\tTb927.11.15700\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7340\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15710\tMED-T1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tmediator of rna polymerase ii transcription subunit 1\tTb11.01.7350\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15710\tMED-T1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tmediator of rna polymerase ii transcription subunit 1\tTb11.01.7350\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15710\tMED-T1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmediator of rna polymerase ii transcription subunit 1\tTb11.01.7350\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15710\tMED-T1\t\tGO:0016592\tPMID:20876299\tIPI\tGeneDB:Tb927.11.650\tC\tmediator of rna polymerase ii transcription subunit 1\tTb11.01.7350\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15730\tTb927.11.15730\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcyclic nucleotide-binding domain containing protein, putative\tTb11.01.7370\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15730\tTb927.11.15730\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tcyclic nucleotide-binding domain containing protein, putative\tTb11.01.7370\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15730\tTb927.11.15730\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tcyclic nucleotide-binding domain containing protein, putative\tTb11.01.7370\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15730\tTb927.11.15730\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tTb11.01.7370\tmRNA\ttaxon:185431\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15750\tTb927.11.15750\t\tGO:0003876\tGO_REF:0000011\tISM\tInterPro:IPR006329\tF\tAMP deaminase, putative\tTb11.01.7390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15750\tTb927.11.15750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAMP deaminase, putative\tTb11.01.7390\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15750\tTb927.11.15750\t\tGO:0006091\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01429\tP\tAMP deaminase, putative\tTb11.01.7390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15750\tTb927.11.15750\t\tGO:0009168\tGO_REF:0000011\tISM\tInterPro:IPR006329\tP\tAMP deaminase, putative\tTb11.01.7390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15750\tTb927.11.15750\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tAMP deaminase, putative\tTb11.01.7390\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15760\tTTA1\t\tGO:0003923\tPMID:12958211\tIMP\t\tF\tGPI transamidase subunit Tta1\tTb11.01.7400\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15760\tTTA1\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tGPI transamidase subunit Tta1\tTb11.01.7400\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15760\tTTA1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGPI transamidase subunit Tta1\tTb11.01.7400\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15760\tTTA1\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tGPI transamidase subunit Tta1\tTb11.01.7400\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15760\tTTA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGPI transamidase subunit Tta1\tTb11.01.7400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15760\tTTA1\t\tGO:0042765\tPMID:12958211\tIDA\t\tC\tGPI transamidase subunit Tta1\tTb11.01.7400\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15770\tTb927.11.15770\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7410\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15770\tTb927.11.15770\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7410\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15770\tTb927.11.15770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7410\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15780\tTb927.11.15780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7430\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15780\tTb927.11.15780\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7430\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15790\tTb927.11.15790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7440\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15790\tTb927.11.15790\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7440\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:0000281\tPMID:26133384\tIMP\t\tP\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:0000281\tPMID:31043517\tIMP\t\tP\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:0005515\tPMID:27226595\tIPI\tGeneDB:Tb927.9.14290\tF\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20160601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:0005515\tPMID:26272611\tIPI\tGeneDB:Tb927.7.6310\tF\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:0032154\tPMID:30171070\tIDA\t\tC\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20180910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:0045184\tPMID:26929336\tIPI\tGeneDB:Tb927.11.8220\tP\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20191114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:0120119\tPMID:31043517\tIDA\t\tC\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20190715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15800\tCIF1\t\tGO:1902472\tPMID:26929336\tIMP\t\tP\tTip Of Extending FAZ protein 1\tTb11.01.7450|TOEFAZ1\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0006735\tPMID:18534909\tISS\t\tP\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0008137\tPMID:18534909\tISS\t\tF\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0030964\tPMID:18534909\tISS\t\tC\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0031966\tPMID:18534909\tISS\t\tC\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15820\tSODC\t\tGO:0004784\tGO_REF:0000011\tISM\tInterPro:IPR001189\tF\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.7480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15820\tSODC\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.7480\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15820\tSODC\t\tGO:0005739\tPMID:16413404\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.7480\tmRNA\ttaxon:185431\t20170810\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15820\tSODC\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.7480\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15820\tSODC\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.7480\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15820\tSODC\t\tGO:0006801\tGO_REF:0000011\tISM\tInterPro:IPR001189\tP\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.7480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15820\tSODC\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.7480\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15820\tSODC\t\tGO:0046872\tGO_REF:0000011\tISM\tInterPro:IPR001189\tF\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.01.7480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15830\tTb927.11.15830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA methyltransferase, putative\tTb11.01.7490\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15830\tTb927.11.15830\t\tGO:0030488\tGO_REF:0000002\tISA\tUniProtKB:TRM3_YEAST\tP\tRNA methyltransferase, putative\tTb11.01.7490\tmRNA\ttaxon:185431\t20130823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15830\tTb927.11.15830\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tRNA methyltransferase, putative\tTb11.01.7490\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0005634\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tC\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0005886\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tC\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0015189\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tF\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0015819\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tP\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0020016\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tC\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0020023\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tC\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15850\tmt-SAF5\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tP\tMitoribosomal SSU assembly factor 5\tTb11.01.7510\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15850\tmt-SAF5\t\tGO:0003723\tPMID:22396527\tIDA\t\tF\tMitoribosomal SSU assembly factor 5\tTb11.01.7510\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15850\tmt-SAF5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 5\tTb11.01.7510\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15850\tmt-SAF5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 5\tTb11.01.7510\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15850\tmt-SAF5\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitoribosomal SSU assembly factor 5\tTb11.01.7510\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15850\tmt-SAF5\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tC\tMitoribosomal SSU assembly factor 5\tTb11.01.7510\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15850\tmt-SAF5\t\tGO:0043631\tPMID:22396527\tIDA\t\tP\tMitoribosomal SSU assembly factor 5\tTb11.01.7510\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15850\tmt-SAF5\t\tGO:0048255\tPMID:22396527\tIDA\t\tP\tMitoribosomal SSU assembly factor 5\tTb11.01.7510\tmRNA\ttaxon:185431\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0005634\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tC\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0005886\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tC\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0015189\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tF\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0015819\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tP\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0020016\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tC\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0020023\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tC\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15870\tTb927.11.15870\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7530\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15880\tTb927.11.15880\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002784\tF\t60S ribosomal protein L27, putative\tTb11.01.7535\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15880\tTb927.11.15880\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L27, putative\tTb11.01.7535\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15880\tTb927.11.15880\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L27, putative\tTb11.01.7535\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15880\tTb927.11.15880\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002784\tC\t60S ribosomal protein L27, putative\tTb11.01.7535\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15880\tTb927.11.15880\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002784\tP\t60S ribosomal protein L27, putative\tTb11.01.7535\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1590\tTb927.11.1590\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0021\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1590\tTb927.11.1590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0021\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15900\tTb927.11.15900\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002784\tF\t60S ribosomal protein L27, putative\tTb11.01.7545\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15900\tTb927.11.15900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L27, putative\tTb11.01.7545\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15900\tTb927.11.15900\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002784\tC\t60S ribosomal protein L27, putative\tTb11.01.7545\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15900\tTb927.11.15900\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002784\tP\t60S ribosomal protein L27, putative\tTb11.01.7545\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15910\tSODB1\t\tGO:0004784\tGO_REF:0000011\tISM\tInterPro:IPR001189\tF\tiron superoxide dismutase\tTb11.01.7550\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15910\tSODB1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tiron superoxide dismutase\tTb11.01.7550\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15910\tSODB1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tiron superoxide dismutase\tTb11.01.7550\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15910\tSODB1\t\tGO:0005829\tPMID:16413404\tIDA\t\tC\tiron superoxide dismutase\tTb11.01.7550\tmRNA\ttaxon:185431\t20170810\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15910\tSODB1\t\tGO:0006801\tGO_REF:0000011\tISM\tInterPro:IPR001189\tP\tiron superoxide dismutase\tTb11.01.7550\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15910\tSODB1\t\tGO:0020015\tPMID:16413404\tIDA\t\tC\tiron superoxide dismutase\tTb11.01.7550\tmRNA\ttaxon:185431\t20170810\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15910\tSODB1\t\tGO:0046872\tGO_REF:0000011\tISM\tInterPro:IPR001189\tF\tiron superoxide dismutase\tTb11.01.7550\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15920\tTb927.11.15920\t\tGO:0004602\tGO_REF:0000011\tISM\tInterPro:IPR000889\tF\tglutathione peroxidase, putative\tTb11.01.7560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15920\tTb927.11.15920\t\tGO:0006979\tGO_REF:0000011\tISM\tInterPro:IPR000889\tP\tglutathione peroxidase, putative\tTb11.01.7560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15920\tTb927.11.15920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglutathione peroxidase, putative\tTb11.01.7560\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15930\tTb927.11.15930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSybindin-like family, putative\tTb11.01.7570\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15930\tTb927.11.15930\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tSybindin-like family, putative\tTb11.01.7570\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15930\tTb927.11.15930\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tSybindin-like family, putative\tTb11.01.7570\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15930\tTb927.11.15930\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSybindin-like family, putative\tTb11.01.7570\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15940\tTb927.11.15940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7580\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15950\tTb927.11.15950\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\tTb11.01.7590\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15950\tTb927.11.15950\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\tTb11.01.7590\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15950\tTb927.11.15950\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\tTb11.01.7590\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15950\tTb927.11.15950\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\tTb11.01.7590\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15950\tTb927.11.15950\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\tTb11.01.7590\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15960\tTb927.11.15960\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\tTb11.01.7600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15960\tTb927.11.15960\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\tTb11.01.7600\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15960\tTb927.11.15960\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\tTb11.01.7600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15960\tTb927.11.15960\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\tTb11.01.7600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15970\tTb927.11.15970\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGuanine nucleotide exchange factor in Golgi transport N-terminal/Sec7 domain containing protein, putative\tTb11.01.7610\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15970\tTb927.11.15970\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tGuanine nucleotide exchange factor in Golgi transport N-terminal/Sec7 domain containing protein, putative\tTb11.01.7610\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15990\tNUP109\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP109\tTb11.01.7630\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15990\tNUP109\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP109\tTb11.01.7630\tmRNA\ttaxon:185431\t20090616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15990\tNUP109\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP109\tTb11.01.7630\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15990\tNUP109\t\tGO:0031080\tPMID:26891179\tIPI\tGeneDB:Tb927.11.2950\tC\tNucleoporin NUP109\tTb11.01.7630\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1600\tTb927.11.1600\t\tGO:0004536\tGO_REF:0000011\tISM\tInterPro:IPR001130\tF\ttatD related deoxyribonuclease, putative\tTb11.55.0020\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1600\tTb927.11.1600\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001130\tP\ttatD related deoxyribonuclease, putative\tTb11.55.0020\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16000\tTb927.11.16000\t\tGO:0004527\tGO_REF:0000011\tISM\tInterPro:IPR006055\tF\texonuclease, putative\tTb11.01.7650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16000\tTb927.11.16000\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR006055\tC\texonuclease, putative\tTb11.01.7650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16000\tTb927.11.16000\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\texonuclease, putative\tTb11.01.7650\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16000\tTb927.11.16000\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\texonuclease, putative\tTb11.01.7650\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16000\tTb927.11.16000\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\texonuclease, putative\tTb11.01.7650\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16010\tTb927.11.16010\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7670\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16020\tDRBD10\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, putative\tTb11.01.7680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16020\tDRBD10\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.01.7680\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16020\tDRBD10\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\tTb11.01.7680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16030\tRPN7\t\tGO:0004175\tPMID:11854272\tIGI\tUniProtKB:RPN6_YEAST\tF\tproteasome regulatory non-ATP-ase subunit 7\tTb11.01.7690\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16030\tRPN7\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 7\tTb11.01.7690\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16030\tRPN7\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 7\tTb11.01.7690\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16030\tRPN7\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 7\tTb11.01.7690\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16030\tRPN7\t\tGO:0006511\tPMID:11854272\tIMP\t\tP\tproteasome regulatory non-ATP-ase subunit 7\tTb11.01.7690\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16040\tTb927.11.16040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprefoldin subunit, putative\tTb11.01.7700\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16050\tDYX1C1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCS domain/TPR repeat, putative\tTb11.01.7710\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16060\tTb927.11.16060\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein, putative\tTb11.01.7720\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16060\tTb927.11.16060\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR000306\tF\tzinc finger protein, putative\tTb11.01.7720\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16070\tp34\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tTFIIH basal transcription factor subunit\tTb11.01.7730\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16070\tp34\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor subunit\tTb11.01.7730\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16080\tTb927.11.16080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSoluble NSF attachment protein, SNAP, putative\tTb11.01.7740\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16090\tdDC2\t\tGO:0005858\tGO_REF:0000024\tISO\tGeneDB:LinJ.32.3050\tC\tOuter dynein arm docking complex protein 2, putative\tTb11.01.7750\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16090\tdDC2\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tOuter dynein arm docking complex protein 2, putative\tTb11.01.7750\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16090\tdDC2\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tOuter dynein arm docking complex protein 2, putative\tTb11.01.7750\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16090\tdDC2\t\tGO:0005930\tPMID:30030284\tIDA\t\tC\tOuter dynein arm docking complex protein 2, putative\tTb11.01.7750\tmRNA\ttaxon:185431\t20180806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16090\tdDC2\t\tGO:0070286\tGO_REF:0000024\tISO\tGeneDB:LinJ.32.3050\tP\tOuter dynein arm docking complex protein 2, putative\tTb11.01.7750\tmRNA\ttaxon:185431\t20100422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1610\tTb927.11.1610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tExocyst complex component Sec6, putative\tTb11.55.0019\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1610\tTb927.11.1610\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tExocyst complex component Sec6, putative\tTb11.55.0019\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16100\tTb927.11.16100\t\tGO:0004197\tGO_REF:0000011\tISM\tInterPro:IPR001394\tF\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.01.7760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16100\tTb927.11.16100\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.01.7760\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16100\tTb927.11.16100\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001394\tP\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.01.7760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16110\tTb927.11.16110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tintegrin alpha chain protein, putative\tTb11.01.7770\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16110\tTb927.11.16110\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tintegrin alpha chain protein, putative\tTb11.01.7770\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16110\tTb927.11.16110\t\tGO:0007160\tGO_REF:0000011\tISM\tInterPro:IPR000413\tP\tintegrin alpha chain protein, putative\tTb11.01.7770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16110\tTb927.11.16110\t\tGO:0008305\tGO_REF:0000011\tISM\tInterPro:IPR000413\tC\tintegrin alpha chain protein, putative\tTb11.01.7770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16110\tTb927.11.16110\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tintegrin alpha chain protein, putative\tTb11.01.7770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16120\tTb927.11.16120\t\tGO:0042162\tPMID:29385523\tIDA\t\tF\thypothetical protein, conserved\tTb11.01.7790\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16130\tNDPK\t\tGO:0004550\tPMID:11080591\tTAS\t\tF\tnucleoside diphosphate kinase\tTb11.01.7800\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16130\tNDPK\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001564\tF\tnucleoside diphosphate kinase\tTb11.01.7800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16130\tNDPK\t\tGO:0005634\tPMID:11080591\tIDA\t\tC\tnucleoside diphosphate kinase\tTb11.01.7800\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16130\tNDPK\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tnucleoside diphosphate kinase\tTb11.01.7800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16130\tNDPK\t\tGO:0006183\tPMID:11080591\tTAS\t\tP\tnucleoside diphosphate kinase\tTb11.01.7800\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16130\tNDPK\t\tGO:0006228\tGO_REF:0000011\tISM\tInterPro:IPR001564\tP\tnucleoside diphosphate kinase\tTb11.01.7800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16130\tNDPK\t\tGO:0006241\tGO_REF:0000011\tISM\tInterPro:IPR001564\tP\tnucleoside diphosphate kinase\tTb11.01.7800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16130\tNDPK\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tnucleoside diphosphate kinase\tTb11.01.7800\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16130\tNDPK\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tnucleoside diphosphate kinase\tTb11.01.7800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001208\tF\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0003677\tPMID:21799014\tIDA\t\tF\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0005634\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0006270\tGO_REF:0000012\tISA\tUniProtKB:P49739\tP\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0006270\tPMID:21799014\tIMP\t\tP\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0042555\tPMID:23451133\tIDA\t\tC\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0044786\tPMID:21799014\tIMP\t\tP\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16140\tMCM7\t\tGO:0071162\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM7\tTb11.01.7810\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16150\tTb927.11.16150\t\tGO:0006457\tGO_REF:0000002\tISS\t\tP\ttubulin binding cofactor A, putative\tTb11.01.7825\tmRNA\ttaxon:185431\t20100721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16150\tTb927.11.16150\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR004226\tF\ttubulin binding cofactor A, putative\tTb11.01.7825\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16160\tTb927.11.16160\t\tGO:0004362\tGO_REF:0000011\tISM\tInterPro:IPR006663\tF\tATP binding protein-like protein\tTb11.01.7830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16160\tTb927.11.16160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATP binding protein-like protein\tTb11.01.7830\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16160\tTb927.11.16160\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tATP binding protein-like protein\tTb11.01.7830\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16170\tTb927.11.16170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7840\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1620\tTb927.11.1620\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0017\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1620\tTb927.11.1620\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.55.0017\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16200\tCAP17\t\tGO:0000226\tPMID:11907282\tIMP\t\tP\tcytoskeleton-associated protein 17\tTb11.01.7880\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16200\tCAP17\t\tGO:0000281\tPMID:11907282\tIMP\t\tP\tcytoskeleton-associated protein 17\tTb11.01.7880\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16200\tCAP17\t\tGO:0015630\tPMID:11907282\tIDA\t\tC\tcytoskeleton-associated protein 17\tTb11.01.7880\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16200\tCAP17\t\tGO:0070417\tPMID:11907282\tIMP\t\tP\tcytoskeleton-associated protein 17\tTb11.01.7880\tmRNA\ttaxon:185431\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0030551\tGO_REF:0000050\tISM\tPfam:PF00027|SMART:SM00100\tF\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20130830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0030552\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508523.80\tF\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0042493\tPMID:23877697\tIMP\t\tP\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20130830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16220\tTb927.11.16220\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tCytochrome b-c1 complex subunit, putative\tTb11.01.7900\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16220\tTb927.11.16220\t\tGO:0005750\tPMID:21610103\tIDA\t\tC\tCytochrome b-c1 complex subunit, putative\tTb11.01.7900\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16230\tTb927.11.16230\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7910\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16230\tTb927.11.16230\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7910\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16230\tTb927.11.16230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7910\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16240\tTb927.11.16240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRING-variant domain containing protein, putative\tTb11.01.7920\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16240\tTb927.11.16240\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR001841\tF\tRING-variant domain containing protein, putative\tTb11.01.7920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16240\tTb927.11.16240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\tTb11.01.7920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16250\tTb927.11.16250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPIN domain containing protein, putative\tTb11.01.7930\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16250\tTb927.11.16250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPIN domain containing protein, putative\tTb11.01.7930\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16260\tTb927.11.16260\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSPRY domain/HECT-domain (ubiquitin-transferase), putative\tTb11.01.7940\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16270\tTb927.11.16270\t\tGO:0003684\tGO_REF:0000012\tISA\tUniProtKB:P19447\tF\tTFIIH basal transcription factor complex helicase XPB subunit, putative\tTb11.01.7950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16270\tTb927.11.16270\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR001161\tC\tTFIIH basal transcription factor complex helicase XPB subunit, putative\tTb11.01.7950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16270\tTb927.11.16270\t\tGO:0005675\tGO_REF:0000012\tISA\tUniProtKB:P19447\tC\tTFIIH basal transcription factor complex helicase XPB subunit, putative\tTb11.01.7950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16270\tTb927.11.16270\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor complex helicase XPB subunit, putative\tTb11.01.7950\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16270\tTb927.11.16270\t\tGO:0006281\tGO_REF:0000012\tISA\tUniProtKB:P19447\tP\tTFIIH basal transcription factor complex helicase XPB subunit, putative\tTb11.01.7950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16270\tTb927.11.16270\t\tGO:0006351\tGO_REF:0000012\tISA\tUniProtKB:P19447\tP\tTFIIH basal transcription factor complex helicase XPB subunit, putative\tTb11.01.7950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16280\tTb927.11.16280\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002171\tF\t60S ribosomal protein L2, putative\tTb11.01.7960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16280\tTb927.11.16280\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR002171\tC\t60S ribosomal protein L2, putative\tTb11.01.7960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16280\tTb927.11.16280\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L2, putative\tTb11.01.7960\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16280\tTb927.11.16280\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002171\tC\t60S ribosomal protein L2, putative\tTb11.01.7960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16280\tTb927.11.16280\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002171\tP\t60S ribosomal protein L2, putative\tTb11.01.7960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16290\tATG4.1\t\tGO:0006914\tGO_REF:0000012\tISA\tUniProtKB:ATG4_YEAST\tP\tAUT2/APG4/ATG4 cysteine peptidase, putative\tTb11.01.7970\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16290\tATG4.1\t\tGO:0008233\tGO_REF:0000011\tISM\tInterPro:IPR005078\tF\tAUT2/APG4/ATG4 cysteine peptidase, putative\tTb11.01.7970\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1630\tTb927.11.1630\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.55.0016\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1630\tTb927.11.1630\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.55.0016\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16300\tTb927.11.16300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.7980\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16310\tMYO13\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001609\tF\tUnconventional myosin\tTb11.01.7990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16310\tMYO13\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LdBPK_324020.1\tC\tUnconventional myosin\tTb11.01.7990\tmRNA\ttaxon:185431\t20150311\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16310\tMYO13\t\tGO:0016459\tGO_REF:0000011\tISM\tInterPro:IPR001609\tC\tUnconventional myosin\tTb11.01.7990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16310\tMYO13\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\tUnconventional myosin\tTb11.01.7990\tmRNA\ttaxon:185431\t20141201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16320\tTb927.11.16320\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8000\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16330\tTb927.11.16330\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8010\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16340\tTb927.11.16340\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tImportin-beta N-terminal domain/HEAT-like repeat, putative\tTb11.01.8030\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16340\tTb927.11.16340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tImportin-beta N-terminal domain/HEAT-like repeat, putative\tTb11.01.8030\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16350\tTb927.11.16350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8040\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16350\tTb927.11.16350\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.01.8040\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16350\tTb927.11.16350\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8040\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16350\tTb927.11.16350\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8040\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16360\tWDR82\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tWD repeat-containing protein 82, putative\tTb11.01.8050\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16360\tWDR82\t\tGO:0006369\tPMID:32084124\tIMP\t\tP\tWD repeat-containing protein 82, putative\tTb11.01.8050\tmRNA\ttaxon:185431\t20200723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16370\tTb927.11.16370\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSHQ1 protein, putative\tTb11.01.8060\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16370\tTb927.11.16370\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSHQ1 protein, putative\tTb11.01.8060\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16370\tTb927.11.16370\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSHQ1 protein, putative\tTb11.01.8060\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16380\tTb927.11.16380\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tTPR repeat, putative\tTb11.01.8070\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16380\tTb927.11.16380\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tTPR repeat, putative\tTb11.01.8070\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16390\tCKS1\t\tGO:0000278\tPMID:12682070\tIMP\t\tP\tcyclin dependent kinases regulatory subunit, putative\tTb11.01.8085\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16390\tCKS1\t\tGO:0004693\tPMID:12682070\tIDA\t\tF\tcyclin dependent kinases regulatory subunit, putative\tTb11.01.8085\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16390\tCKS1\t\tGO:0005956\tPMID:12682070\tIGI\t\tC\tcyclin dependent kinases regulatory subunit, putative\tTb11.01.8085\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1640\tTb927.11.1640\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tStumpy formation signalling pathway protein, putative\tTb11.55.0015\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1640\tTb927.11.1640\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tStumpy formation signalling pathway protein, putative\tTb11.55.0015\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1640\tTb927.11.1640\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tStumpy formation signalling pathway protein, putative\tTb11.55.0015\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1640\tTb927.11.1640\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tStumpy formation signalling pathway protein, putative\tTb11.55.0015\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1640\tTb927.11.1640\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tStumpy formation signalling pathway protein, putative\tTb11.55.0015\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1640\tTb927.11.1640\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\tStumpy formation signalling pathway protein, putative\tTb11.55.0015\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16400\tKAP3\t\tGO:0003677\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511029.20\tF\tkinetoplast-associated protein 3, putative\tTb11.01.8090\tmRNA\ttaxon:185431\t20100908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16400\tKAP3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinetoplast-associated protein 3, putative\tTb11.01.8090\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16400\tKAP3\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tkinetoplast-associated protein 3, putative\tTb11.01.8090\tmRNA\ttaxon:185431\t20140213\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16400\tKAP3\t\tGO:0005759\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511029.20\tC\tkinetoplast-associated protein 3, putative\tTb11.01.8090\tmRNA\ttaxon:185431\t20100908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16400\tKAP3\t\tGO:0006323\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511029.20\tP\tkinetoplast-associated protein 3, putative\tTb11.01.8090\tmRNA\ttaxon:185431\t20100908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16400\tKAP3\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511029.20\tC\tkinetoplast-associated protein 3, putative\tTb11.01.8090\tmRNA\ttaxon:185431\t20100908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16410\tTb927.11.16410\t\tGO:0000015\tGO_REF:0000011\tISM\tInterPro:IPR000941\tC\tenolase, putative\tTb11.01.8100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16410\tTb927.11.16410\t\tGO:0004634\tGO_REF:0000011\tISM\tInterPro:IPR000941\tF\tenolase, putative\tTb11.01.8100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16410\tTb927.11.16410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tenolase, putative\tTb11.01.8100\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16410\tTb927.11.16410\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tenolase, putative\tTb11.01.8100\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16410\tTb927.11.16410\t\tGO:0006096\tGO_REF:0000011\tISM\tInterPro:IPR000941\tP\tenolase, putative\tTb11.01.8100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16420\tTb927.11.16420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMethyltransferase TYW3, putative\tTb11.01.8110\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16420\tTb927.11.16420\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMethyltransferase TYW3, putative\tTb11.01.8110\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16420\tTb927.11.16420\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMethyltransferase TYW3, putative\tTb11.01.8110\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16420\tTb927.11.16420\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMethyltransferase TYW3, putative\tTb11.01.8110\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16430\tERAP18\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t18 kDa ER-associated protein\tTb11.01.8120\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16430\tERAP18\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\t18 kDa ER-associated protein\tTb11.01.8120\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16430\tERAP18\t\tGO:0005783\tPMID:20109450\tIDA\t\tC\t18 kDa ER-associated protein\tTb11.01.8120\tmRNA\ttaxon:185431\t20100406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16440\tTb927.11.16440\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tTransmembrane protein 18, putative\tTb11.01.8130\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16440\tTb927.11.16440\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTransmembrane protein 18, putative\tTb11.01.8130\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16440\tTb927.11.16440\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tTransmembrane protein 18, putative\tTb11.01.8130\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16440\tTb927.11.16440\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tTransmembrane protein 18, putative\tTb11.01.8130\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16450\tTb927.11.16450\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8140\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16470\tTb927.11.16470\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.01.8190\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16470\tTb927.11.16470\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tSUMO-interacting motif-containing protein\tTb11.01.8190\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16470\tTb927.11.16470\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.01.8190\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16470\tTb927.11.16470\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.01.8190\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16480\tTb927.11.16480\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR001753\tF\tenoyl-CoA hydratase/isomerase family protein, putative\tTb11.01.8200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16480\tTb927.11.16480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tenoyl-CoA hydratase/isomerase family protein, putative\tTb11.01.8200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16480\tTb927.11.16480\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tenoyl-CoA hydratase/isomerase family protein, putative\tTb11.01.8200\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16480\tTb927.11.16480\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tenoyl-CoA hydratase/isomerase family protein, putative\tTb11.01.8200\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16480\tTb927.11.16480\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001753\tP\tenoyl-CoA hydratase/isomerase family protein, putative\tTb11.01.8200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16480\tTb927.11.16480\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tenoyl-CoA hydratase/isomerase family protein, putative\tTb11.01.8200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16480\tTb927.11.16480\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tenoyl-CoA hydratase/isomerase family protein, putative\tTb11.01.8200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16490\tMTAP\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tMethyltransferase-associated protein\tTb11.01.8210\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1650\tTb927.11.1650\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0030\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1650\tTb927.11.1650\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.55.0030\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16500\tTb927.11.16500\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8220\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16510\tTb927.11.16510\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.8225\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16530\tTb927.11.16530\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.8230\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16540\tTb927.11.16540\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tRoadblock/LC7 domain containing protein, putative\tTb11.01.8240\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16550\tZC3H46\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tZinc finger protein, C3H1 type-like\tTb11.01.8270\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16550\tZC3H46\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tZinc finger protein, C3H1 type-like\tTb11.01.8270\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16550\tZC3H46\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tZinc finger protein, C3H1 type-like\tTb11.01.8270\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16550\tZC3H46\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tZinc finger protein, C3H1 type-like\tTb11.01.8270\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0000139\tGO_REF:0000011\tISM\tInterPro:IPR007271\tC\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0005351\tGO_REF:0000011\tISM\tInterPro:IPR007271\tF\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0005459\tPMID:23443657\tIDA\t\tF\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20170925\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0005462\tPMID:23443657\tIDA\t\tF\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20170925\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0008643\tGO_REF:0000011\tISM\tInterPro:IPR007271\tP\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0015739\tGO_REF:0000012\tISA\tUniProtKB:O08520\tP\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16570\tTb927.11.16570\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.8290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16570\tTb927.11.16570\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.8290\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16570\tTb927.11.16570\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.8290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16570\tTb927.11.16570\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.8290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16570\tTb927.11.16570\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.8290\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16590\tRBP37\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, putative\tTb11.01.8310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16590\tRBP37\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.01.8310\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16590\tRBP37\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\tTb11.01.8310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1660\tTb927.11.1660\t\tGO:0000160\tGO_REF:0000011\tISM\tInterPro:IPR002078\tP\tvesicular transport protein (CDC48 homologue), putative\tTb11.55.0014\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1660\tTb927.11.1660\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tvesicular transport protein (CDC48 homologue), putative\tTb11.55.0014\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1660\tTb927.11.1660\t\tGO:0006355\tGO_REF:0000011\tISM\tInterPro:IPR002078\tP\tvesicular transport protein (CDC48 homologue), putative\tTb11.55.0014\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1660\tTb927.11.1660\t\tGO:0016887\tGO_REF:0000011\tISM\tPfam:PF00004\tF\tvesicular transport protein (CDC48 homologue), putative\tTb11.55.0014\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16600\tEAP2\t\tGO:0000175\tPMID:12821657\tTAS\t\tF\texosome-associated protein 2\tTb11.01.8320\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16600\tEAP2\t\tGO:0000176\tPMID:12821657\tIDA\t\tC\texosome-associated protein 2\tTb11.01.8320\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16600\tEAP2\t\tGO:0000177\tPMID:12821657\tIDA\t\tC\texosome-associated protein 2\tTb11.01.8320\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16600\tEAP2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\texosome-associated protein 2\tTb11.01.8320\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16600\tEAP2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\texosome-associated protein 2\tTb11.01.8320\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16600\tEAP2\t\tGO:0006364\tPMID:12821657\tIMP\t\tP\texosome-associated protein 2\tTb11.01.8320\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16610\tTb927.11.16610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc-finger of a C2HC-type, putative\tTb11.01.8330\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16610\tTb927.11.16610\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tzinc-finger of a C2HC-type, putative\tTb11.01.8330\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16610\tTb927.11.16610\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tzinc-finger of a C2HC-type, putative\tTb11.01.8330\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16620\tTb927.11.16620\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8340\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16630\tTb927.11.16630\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmajor facilitator superfamily, putative\tTb11.01.8350\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16630\tTb927.11.16630\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tmajor facilitator superfamily, putative\tTb11.01.8350\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16640\tTZP87\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tUncharacterised protein family UPF0564, putative\tTb11.01.8370\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16640\tTZP87\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tUncharacterised protein family UPF0564, putative\tTb11.01.8370\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16650\tTb927.11.16650\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8380\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16650\tTb927.11.16650\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8380\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16650\tTb927.11.16650\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8380\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16670\tTb927.11.16670\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8400\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16680\tTb927.11.16680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttRNA pseudouridine synthase D (TruD), putative\tTb11.01.8410\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16680\tTb927.11.16680\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\ttRNA pseudouridine synthase D (TruD), putative\tTb11.01.8410\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16690\tVCL3\t\tGO:0005247\tGO_REF:0000011\tISM\tInterPro:IPR000834\tF\tVoltage-gated Chloride channel Like 3\tTb11.01.8420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16690\tVCL3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVoltage-gated Chloride channel Like 3\tTb11.01.8420\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16690\tVCL3\t\tGO:0005783\tPMID:29244877\tIDA\t\tC\tVoltage-gated Chloride channel Like 3\tTb11.01.8420\tmRNA\ttaxon:185431\t20171220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16690\tVCL3\t\tGO:0006821\tGO_REF:0000011\tISM\tInterPro:IPR000834\tP\tVoltage-gated Chloride channel Like 3\tTb11.01.8420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16690\tVCL3\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR000834\tC\tVoltage-gated Chloride channel Like 3\tTb11.01.8420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16690\tVCL3\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tVoltage-gated Chloride channel Like 3\tTb11.01.8420\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16690\tVCL3\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tVoltage-gated Chloride channel Like 3\tTb11.01.8420\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0000096\tGO_REF:0000012\tISA\tUniProtKB:Q9Y697\tP\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0002143\tPMID:19968861\tTAS\t\tP\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20091230\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0005730\tPMID:24243795\tIDA\t\tC\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20170209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0005739\tPMID:19968861\tIDA\t\tC\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20091230\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:Q9Y697\tP\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0008483\tGO_REF:0000012\tISA\tUniProtKB:Q9Y697\tF\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0016226\tPMID:19968861\tTAS\t\tP\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20091230\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0031071\tPMID:19968861\tIMP\t\tF\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20091230\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16710\tTb927.11.16710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8440\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16720\tCYC6\t\tGO:0000281\tPMID:12682070\tIDA\t\tP\tmitotic cyclin 6\tTb11.01.8460\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16720\tCYC6\t\tGO:0005515\tPMID:12682070\tIPI\tGeneDB:Tb927.10.4990\tF\tmitotic cyclin 6\tTb11.01.8460\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16720\tCYC6\t\tGO:0005634\tPMID:29530930\tIDA\t\tC\tmitotic cyclin 6\tTb11.01.8460\tmRNA\ttaxon:185431\t20180403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16720\tCYC6\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitotic cyclin 6\tTb11.01.8460\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16720\tCYC6\t\tGO:0019908\tPMID:12682070\tIDA\t\tC\tmitotic cyclin 6\tTb11.01.8460\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16720\tCYC6\t\tGO:0051726\tPMID:12682070\tTAS\t\tP\tmitotic cyclin 6\tTb11.01.8460\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16720\tCYC6\t\tGO:0090307\tPMID:29530930\tIMP\t\tP\tmitotic cyclin 6\tTb11.01.8460\tmRNA\ttaxon:185431\t20180403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16730\tGCVL-2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdihydrolipoyl dehydrogenase\tTb11.01.8470\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16730\tGCVL-2\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:IPR004099\tC\tdihydrolipoyl dehydrogenase\tTb11.01.8470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16730\tGCVL-2\t\tGO:0005739\tPMID:16823982\tISO\tGeneDB:LinJ.32.3510\tC\tdihydrolipoyl dehydrogenase\tTb11.01.8470\tmRNA\ttaxon:185431\t20100204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16730\tGCVL-2\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tdihydrolipoyl dehydrogenase\tTb11.01.8470\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16730\tGCVL-2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tdihydrolipoyl dehydrogenase\tTb11.01.8470\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16730\tGCVL-2\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tdihydrolipoyl dehydrogenase\tTb11.01.8470\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16730\tGCVL-2\t\tGO:0015036\tGO_REF:0000011\tISM\tInterPro:IPR001327\tF\tdihydrolipoyl dehydrogenase\tTb11.01.8470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16730\tGCVL-2\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tdihydrolipoyl dehydrogenase\tTb11.01.8470\tmRNA\ttaxon:185431\t20100714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16740\tJ45\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\tTb11.01.8480\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16740\tJ45\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\tTb11.01.8480\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16740\tJ45\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001305\tP\tchaperone protein DnaJ, putative\tTb11.01.8480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16740\tJ45\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR001305\tF\tchaperone protein DnaJ, putative\tTb11.01.8480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16740\tJ45\t\tGO:0051087\tGO_REF:0000012\tISA\tUniProtKB:Q9QYJ0\tF\tchaperone protein DnaJ, putative\tTb11.01.8480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16750\tTb927.11.16750\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.8500\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16750\tTb927.11.16750\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8500\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16750\tTb927.11.16750\t\tGO:0005739\tPMID:23650088\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8500\tmRNA\ttaxon:185431\t20200409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16760\tTCP-1-alpha\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tT-complex protein 1, alpha subunit, putative\tTb11.01.8510\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16760\tTCP-1-alpha\t\tGO:0005832\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tC\tT-complex protein 1, alpha subunit, putative\tTb11.01.8510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16760\tTCP-1-alpha\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, alpha subunit, putative\tTb11.01.8510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16760\tTCP-1-alpha\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, alpha subunit, putative\tTb11.01.8510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16760\tTCP-1-alpha\t\tGO:0051726\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, alpha subunit, putative\tTb11.01.8510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16760\tTCP-1-alpha\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tT-complex protein 1, alpha subunit, putative\tTb11.01.8510\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16770\tTb927.11.16770\t\tGO:0004342\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00502\tF\tglucosamine-6-phosphate isomerase, putative\tTb11.01.8520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16770\tTb927.11.16770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglucosamine-6-phosphate isomerase, putative\tTb11.01.8520\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16770\tTb927.11.16770\t\tGO:0005975\tGO_REF:0000011\tISM\tInterPro:IPR006148\tP\tglucosamine-6-phosphate isomerase, putative\tTb11.01.8520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16770\tTb927.11.16770\t\tGO:0006046\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00502\tP\tglucosamine-6-phosphate isomerase, putative\tTb11.01.8520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16770\tTb927.11.16770\t\tGO:0020015\tPMID:18242729\tIDA\t\tC\tglucosamine-6-phosphate isomerase, putative\tTb11.01.8520\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16770\tTb927.11.16770\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tglucosamine-6-phosphate isomerase, putative\tTb11.01.8520\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16780\tTb927.11.16780\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.8530\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16790\tECK1\t\tGO:0004672\tGO_REF:0000002\tISS\t\tF\tmitogen-activated protein kinase\tTb11.01.8550\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16790\tECK1\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tmitogen-activated protein kinase\tTb11.01.8550\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16790\tECK1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tmitogen-activated protein kinase\tTb11.01.8550\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16790\tECK1\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tmitogen-activated protein kinase\tTb11.01.8550\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1680\tTb927.11.1680\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003959\tF\tvesicular-fusion protein SEC18, putative\tTb11.55.0012\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1680\tTb927.11.1680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tvesicular-fusion protein SEC18, putative\tTb11.55.0012\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1680\tTb927.11.1680\t\tGO:0006888\tGO_REF:0000012\tISA\tUniProtKB:P34732\tP\tvesicular-fusion protein SEC18, putative\tTb11.55.0012\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1680\tTb927.11.1680\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:P34732\tP\tvesicular-fusion protein SEC18, putative\tTb11.55.0012\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1680\tTb927.11.1680\t\tGO:0048193\tGO_REF:0000012\tISA\tUniProtKB:P34732\tP\tvesicular-fusion protein SEC18, putative\tTb11.55.0012\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16800\tTb927.11.16800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8560\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16800\tTb927.11.16800\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8560\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16800\tTb927.11.16800\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8560\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16810\tTb927.11.16810\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tdynein light intermediate chain D1bLIC, putative\tTb11.01.8570\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16830\tRABL5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRab-like 5, small G protein\tTb11.01.8590|IFT22\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16830\tRABL5\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tRab-like 5, small G protein\tTb11.01.8590|IFT22\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16830\tRABL5\t\tGO:0030992\tPMID:20923419\tIPI\tGeneDB:Tb927.3.3000\tC\tRab-like 5, small G protein\tTb11.01.8590|IFT22\tmRNA\ttaxon:185431\t20170206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16830\tRABL5\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tRab-like 5, small G protein\tTb11.01.8590|IFT22\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16830\tRABL5\t\tGO:0060271\tPMID:30940671\tIPI\tGeneDB:Tb927.10.2640|GeneDB:Tb927.7.3370\tP\tRab-like 5, small G protein\tTb11.01.8590|IFT22\tmRNA\ttaxon:185431\t20190714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16830\tRABL5\t\tGO:0060271\tPMID:19240117\tIMP\t\tP\tRab-like 5, small G protein\tTb11.01.8590|IFT22\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16850\tTb927.11.16850\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tGolgi transport complex subunit 5, putative\tTb11.01.8610\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16860\tGRBC3\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tP\tmitochondrial RNA binding protein\tTb11.01.8620|MRB8620\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16860\tGRBC3\t\tGO:0003723\tPMID:21451155\tIDA\t\tF\tmitochondrial RNA binding protein\tTb11.01.8620|MRB8620\tmRNA\ttaxon:185431\t20120906\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16860\tGRBC3\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding protein\tTb11.01.8620|MRB8620\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16860\tGRBC3\t\tGO:0016070\tPMID:21451155\tIDA\t\tP\tmitochondrial RNA binding protein\tTb11.01.8620|MRB8620\tmRNA\ttaxon:185431\t20120906\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16860\tGRBC3\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.5.3010\tC\tmitochondrial RNA binding protein\tTb11.01.8620|MRB8620\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16860\tGRBC3\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmitochondrial RNA binding protein\tTb11.01.8620|MRB8620\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16870\tNDUFA2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase subunit NI8M, putative\tTb11.01.8630\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16870\tNDUFA2\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tNADH dehydrogenase subunit NI8M, putative\tTb11.01.8630\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16870\tNDUFA2\t\tGO:0005739\tPMID:18073385\tEXP\t\tC\tNADH dehydrogenase subunit NI8M, putative\tTb11.01.8630\tmRNA\ttaxon:185431\t20090507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16870\tNDUFA2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH dehydrogenase subunit NI8M, putative\tTb11.01.8630\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16870\tNDUFA2\t\tGO:0006120\tPMID:18534909\tISS\t\tP\tNADH dehydrogenase subunit NI8M, putative\tTb11.01.8630\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16870\tNDUFA2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase subunit NI8M, putative\tTb11.01.8630\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16870\tNDUFA2\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase subunit NI8M, putative\tTb11.01.8630\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16880\tTb927.11.16880\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\tTb11.01.8640\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16890\tFLAM7\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTetratricopeptide-like helical domain containing protein\tTb11.01.8650\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16890\tFLAM7\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tTetratricopeptide-like helical domain containing protein\tTb11.01.8650\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16900\tTb927.11.16900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.v5.0032\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16900\tTb927.11.16900\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.v5.0032\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16900\tTb927.11.16900\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.v5.0032\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16910\tTb927.11.16910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSerine hydrolase (FSH1)/RWD domain/50S ribosome-binding GTPase/GTPase of unknown function C-terminal, putative\tTb11.01.8680\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16920\tVEX1\t\tGO:0000228\tPMID:27226299\tIDA\t\tC\tVSG exclusion protein 1\tTb11.01.8690\tmRNA\ttaxon:185431\t20160531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16920\tVEX1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tVSG exclusion protein 1\tTb11.01.8690\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16920\tVEX1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tVSG exclusion protein 1\tTb11.01.8690\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16920\tVEX1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVSG exclusion protein 1\tTb11.01.8690\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16920\tVEX1\t\tGO:0020033\tPMID:27226299\tIMP\t\tP\tVSG exclusion protein 1\tTb11.01.8690\tmRNA\ttaxon:185431\t20160531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0005524\tGO_REF:0000024\tISS\t\tF\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0006810\tGO_REF:0000024\tISS\t\tP\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0015232\tGO_REF:0000012\tISA\tUniProtKB:O75027\tF\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0016021\tPMID:11152613|GO_REF:0000011\tISM\tInterPro:IPR001140\tC\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0042626\tGO_REF:0000024\tISS\t\tF\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0043190\tGO_REF:0000011\tISM\tPfam:PF00005\tC\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16940\tTb927.11.16940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMIZ/SP-RING zinc finger, putative\tTb11.01.8710\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16940\tTb927.11.16940\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tMIZ/SP-RING zinc finger, putative\tTb11.01.8710\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16940\tTb927.11.16940\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMIZ/SP-RING zinc finger, putative\tTb11.01.8710\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16950\tTb927.11.16950\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8715\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16950\tTb927.11.16950\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8715\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16950\tTb927.11.16950\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8715\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16970\tTb927.11.16970\t\tGO:0000159\tGO_REF:0000012\tISA\tUniProtKB:P13353\tC\tprotein phosphatase 4, putative\tTb11.01.8740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16970\tTb927.11.16970\t\tGO:0004722\tGO_REF:0000012\tISA\tUniProtKB:P32345\tF\tprotein phosphatase 4, putative\tTb11.01.8740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16970\tTb927.11.16970\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 4, putative\tTb11.01.8740\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16970\tTb927.11.16970\t\tGO:0006796\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tprotein phosphatase 4, putative\tTb11.01.8740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16970\tTb927.11.16970\t\tGO:0042578\tGO_REF:0000011\tISM\tPfam:PF00149\tF\tprotein phosphatase 4, putative\tTb11.01.8740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16980\tJ1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\tTb11.01.8750\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16980\tJ1\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\tTb11.01.8750\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16980\tJ1\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\tTb11.01.8750\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16990\tmt-LAF17\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitoribosomal LSU assembly factor 17\tmt-EngB|Tb11.01.8760\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.170\tmt-SAF15\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 15\tTb11.03.0960\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.170\tmt-SAF15\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 15\tTb11.03.0960\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.170\tmt-SAF15\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 15\tTb11.03.0960\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1700\tTb927.11.1700\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.55.0010\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1700\tTb927.11.1700\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0010\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17000\tAIR9\t\tGO:0000910\tPMID:22329999\tIMP\t\tP\tAIR9-like protein\tTb11.01.8770\tmRNA\ttaxon:185431\t20180122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17000\tAIR9\t\tGO:0005856\tPMID:22329999\tIDA\t\tC\tAIR9-like protein\tTb11.01.8770\tmRNA\ttaxon:185431\t20180122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17010\tTb927.11.17010\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tRab5-interacting protein (Rab5ip), putative\tTb11.01.8775\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17020\tTb927.11.17020\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.8780\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0004016\tPMID:1545803|PMID:24879126\tIGI\tUniProtKB:CYAA_YEAST\tF\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0005929\tPMID:1545803|PMID:24879126\tIDA\t\tC\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0016020\tPMID:1545803\tIDA\t\tC\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0019933\tPMID:10637587\tTAS\t\tP\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0042803\tPMID:24879126\tIDA\t\tF\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20150604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0003723\tPMID:9013632\tIDA\t\tF\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0005515\tPMID:30120147\tIPI\tGeneDB:Tb927.8.8170\tF\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20190813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0005739\tPMID:9013632\tIDA\t\tC\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0016556\tPMID:19620277\tIMP\t\tP\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20190813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0016556\tPMID:9013632\tTAS\t\tP\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1710\tgBP21\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding protein 1\tMRP1|Tb11.55.0009\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17190\tTb927.11.17190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0035\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17190\tTb927.11.17190\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG), putative\tTb11.57.0035\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1720\tTb927.11.1720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0008\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1720\tTb927.11.1720\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0008\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1720\tTb927.11.1720\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0008\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17320\tTb927.11.17320\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0024\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17320\tTb927.11.17320\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG), putative\tTb11.57.0024\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17370\tTb927.11.17370\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0019\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17370\tTb927.11.17370\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG), putative\tTb11.57.0019\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1740\tIFT88\t\tGO:0008361\tPMID:14532107\tIMP\t\tP\tintraflagellar transport protein 88\tTb11.55.0006\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1740\tIFT88\t\tGO:0030010\tPMID:14532107\tIMP\t\tP\tintraflagellar transport protein 88\tTb11.55.0006\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1740\tIFT88\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tintraflagellar transport protein 88\tTb11.55.0006\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1740\tIFT88\t\tGO:0030992\tPMID:20923419\tIPI\tGeneDB:Tb927.3.3000\tC\tintraflagellar transport protein 88\tTb11.55.0006\tmRNA\ttaxon:185431\t20170206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1740\tIFT88\t\tGO:0031514\tPMID:14532107\tTAS\t\tC\tintraflagellar transport protein 88\tTb11.55.0006\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1740\tIFT88\t\tGO:0035735\tPMID:18094047\tIMP\t\tP\tintraflagellar transport protein 88\tTb11.55.0006\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1740\tIFT88\t\tGO:0060271\tPMID:14532107\tIMP\t\tP\tintraflagellar transport protein 88\tTb11.55.0006\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17580\tTb927.11.17580\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.21.0004\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17580\tTb927.11.17580\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.21.0004\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1760\tJMJ1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tJumonji domain protein 1\tTb11.55.0004\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1760\tJMJ1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tJumonji domain protein 1\tTb11.55.0004\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1760\tJMJ1\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tJumonji domain protein 1\tTb11.55.0004\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1760\tJMJ1\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tJumonji domain protein 1\tTb11.55.0004\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1770\tTb927.11.1770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0003\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1770\tTb927.11.1770\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0003\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1770\tTb927.11.1770\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.55.0003\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17720\tTb927.11.17720\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.24.0007\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17720\tTb927.11.17720\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.24.0007\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17770\tTb927.11.17770\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.24.0012\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17770\tTb927.11.17770\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.24.0012\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1780\tTb927.11.1780\t\tGO:0004722\tGO_REF:0000012\tISA\tUniProtKB:P38797\tF\tprotein phosphatase 2C, putative\tTb11.55.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1780\tTb927.11.1780\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P38797\tC\tprotein phosphatase 2C, putative\tTb11.55.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17890\tTb927.11.17890\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\tTb11.17.0002\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1790\tTb927.11.1790\t\tGO:0005634\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.55.0001\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1790\tTb927.11.1790\t\tGO:0006334\tPMID:23133390\tIDA\t\tP\thistone H1\tTb11.55.0001\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1790\tTb927.11.1790\t\tGO:0031490\tPMID:23133390\tIDA\t\tF\thistone H1\tTb11.55.0001\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1790\tTb927.11.1790\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thistone H1\tTb11.55.0001\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1790\tTb927.11.1790\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.55.0001\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1790\tTb927.11.1790\t\tGO:0070828\tPMID:23133390\tIMP\t\tP\thistone H1\tTb11.55.0001\tmRNA\ttaxon:185431\t20210827\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.180\tTb927.11.180\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\telectron transfer flavoprotein, putative\tTb11.03.0950\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.180\tTb927.11.180\t\tGO:0005739\tPMID:15223320\tISM\t\tC\telectron transfer flavoprotein, putative\tTb11.03.0950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.180\tTb927.11.180\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\telectron transfer flavoprotein, putative\tTb11.03.0950\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.180\tTb927.11.180\t\tGO:0009055\tGO_REF:0000011\tISM\tInterPro:IPR000049\tF\telectron transfer flavoprotein, putative\tTb11.03.0950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.180\tTb927.11.180\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\telectron transfer flavoprotein, putative\tTb11.03.0950\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.180\tTb927.11.180\t\tGO:0055114\tGO_REF:0000011\tISM\tInterPro:IPR000049\tP\telectron transfer flavoprotein, putative\tTb11.03.0950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1800\tTb927.11.1800\t\tGO:0005634\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.39.0008\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1800\tTb927.11.1800\t\tGO:0006334\tPMID:23133390\tIDA\t\tP\thistone H1\tTb11.39.0008\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1800\tTb927.11.1800\t\tGO:0031490\tPMID:23133390\tIDA\t\tF\thistone H1\tTb11.39.0008\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1800\tTb927.11.1800\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thistone H1\tTb11.39.0008\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1800\tTb927.11.1800\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.39.0008\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1800\tTb927.11.1800\t\tGO:0070828\tPMID:23133390\tIMP\t\tP\thistone H1\tTb11.39.0008\tmRNA\ttaxon:185431\t20210827\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1810\tTb927.11.1810\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRing finger domain containing protein, putative\tTb11.39.0007\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1810\tTb927.11.1810\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR001841\tF\tRing finger domain containing protein, putative\tTb11.39.0007\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1810\tTb927.11.1810\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tRing finger domain containing protein, putative\tTb11.39.0007\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1820\tTb927.11.1820\t\tGO:0003743\tGO_REF:0000011\tISM\tInterPro:IPR000649\tF\ttranslation initiation factor eIF2B delta subunit, putative\tTb11.39.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1820\tTb927.11.1820\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR000649\tF\ttranslation initiation factor eIF2B delta subunit, putative\tTb11.39.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1820\tTb927.11.1820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttranslation initiation factor eIF2B delta subunit, putative\tTb11.39.0006\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1820\tTb927.11.1820\t\tGO:0005851\tGO_REF:0000011\tISM\tInterPro:IPR000649\tC\ttranslation initiation factor eIF2B delta subunit, putative\tTb11.39.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1820\tTb927.11.1820\t\tGO:0006413\tGO_REF:0000011\tISM\tInterPro:IPR000649\tP\ttranslation initiation factor eIF2B delta subunit, putative\tTb11.39.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1820\tTb927.11.1820\t\tGO:0006417\tGO_REF:0000012\tISA\tUniProtKB:Q61749\tP\ttranslation initiation factor eIF2B delta subunit, putative\tTb11.39.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18290\tTb927.11.18290\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.v5.0021\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1830\tTb927.11.1830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.39.0005\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1830\tTb927.11.1830\t\tGO:0060170\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.39.0005\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1840\tCAP46\t\tGO:0000910\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\tTb11.39.0004\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1840\tCAP46\t\tGO:0005856\tPMID:35447115\tIDA\t\tC\tCytoskeleton-associated protein 46 kDa\tTb11.39.0004\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1840\tCAP46\t\tGO:0032991\tPMID:35447115\tIPI\tGeneDB:Tb927.6.5070\tC\tCytoskeleton-associated protein 46 kDa\tTb11.39.0004\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1840\tCAP46\t\tGO:0050821\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\tTb11.39.0004\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1840\tCAP46\t\tGO:1903673\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\tTb11.39.0004\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1860\tTb927.11.1860\t\tGO:0005634\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0007\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1860\tTb927.11.1860\t\tGO:0006334\tPMID:23133390\tIDA\t\tP\thistone H1\tTb11.42.0007\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1860\tTb927.11.1860\t\tGO:0031490\tPMID:23133390\tIDA\t\tF\thistone H1\tTb11.42.0007\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1860\tTb927.11.1860\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thistone H1\tTb11.42.0007\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1860\tTb927.11.1860\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0007\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1860\tTb927.11.1860\t\tGO:0070828\tPMID:23133390\tIMP\t\tP\thistone H1\tTb11.42.0007\tmRNA\ttaxon:185431\t20210827\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18680\tDYNLL1\t\tGO:0003777\tGO_REF:0000011\tISM\tInterPro:IPR001372\tF\tdynein light chain LC8, putative\tTb11.50.0007\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18680\tDYNLL1\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tdynein light chain LC8, putative\tTb11.50.0007\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18680\tDYNLL1\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001372\tC\tdynein light chain LC8, putative\tTb11.50.0007\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18680\tDYNLL1\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tdynein light chain LC8, putative\tTb11.50.0007\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18680\tDYNLL1\t\tGO:0007017\tGO_REF:0000011\tISM\tInterPro:IPR001372\tP\tdynein light chain LC8, putative\tTb11.50.0007\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18680\tDYNLL1\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tdynein light chain LC8, putative\tTb11.50.0007\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18680\tDYNLL1\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tdynein light chain LC8, putative\tTb11.50.0007\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1870\tTb927.11.1870\t\tGO:0005634\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0006\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1870\tTb927.11.1870\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thistone H1\tTb11.42.0006\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1870\tTb927.11.1870\t\tGO:0006334\tPMID:23133390\tIDA\t\tP\thistone H1\tTb11.42.0006\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1870\tTb927.11.1870\t\tGO:0031490\tPMID:23133390\tIDA\t\tF\thistone H1\tTb11.42.0006\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1870\tTb927.11.1870\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0006\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1870\tTb927.11.1870\t\tGO:0070828\tPMID:23133390\tIMP\t\tP\thistone H1\tTb11.42.0006\tmRNA\ttaxon:185431\t20210827\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18700\tTb927.11.18700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.v5.0075\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1880\tTb927.11.1880\t\tGO:0005634\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0005\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1880\tTb927.11.1880\t\tGO:0006334\tPMID:23133390\tIDA\t\tP\thistone H1\tTb11.42.0005\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1880\tTb927.11.1880\t\tGO:0031490\tPMID:23133390\tIDA\t\tF\thistone H1\tTb11.42.0005\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1880\tTb927.11.1880\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thistone H1\tTb11.42.0005\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1880\tTb927.11.1880\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0005\tmRNA\ttaxon:185431\t20160923\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1880\tTb927.11.1880\t\tGO:0070828\tPMID:23133390\tIMP\t\tP\thistone H1\tTb11.42.0005\tmRNA\ttaxon:185431\t20210827\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1890\tSTRAP\t\tGO:0010494\tPMID:26187993\tIDA\t\tC\tWD domain, G-beta repeat, putative\tTb11.42.0004\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1890\tSTRAP\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tWD domain, G-beta repeat, putative\tTb11.42.0004\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.18910\tTb927.11.18910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tvariant surface protein (VSG), putative (pseudogene)\tTb11.v5.0095\tpseudogenic_transcript\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.190\tTb927.11.190\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR000795\tF\telongation factor, putative\tTb11.03.0940\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1900\tTb927.11.1900\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\tT-complex protein 1, beta subunit, putative\tTb11.42.0003\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1900\tTb927.11.1900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tT-complex protein 1, beta subunit, putative\tTb11.42.0003\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1900\tTb927.11.1900\t\tGO:0005832\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tC\tT-complex protein 1, beta subunit, putative\tTb11.42.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1900\tTb927.11.1900\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, beta subunit, putative\tTb11.42.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1900\tTb927.11.1900\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tT-complex protein 1, beta subunit, putative\tTb11.42.0003\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1900\tTb927.11.1900\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, beta subunit, putative\tTb11.42.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1900\tTb927.11.1900\t\tGO:0051726\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, beta subunit, putative\tTb11.42.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1900\tTb927.11.1900\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tT-complex protein 1, beta subunit, putative\tTb11.42.0003\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19020\tTb927.11.19020\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein (pseudogene)\tTb11.v5.0100\tpseudogenic_transcript\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19020\tTb927.11.19020\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein (pseudogene)\tTb11.v5.0100\tpseudogenic_transcript\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19020\tTb927.11.19020\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein (pseudogene)\tTb11.v5.0100\tpseudogenic_transcript\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0006812\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01297\tP\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0008324\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01297\tF\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0015562\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01297\tF\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1930\tTb927.11.1930\t\tGO:0004197\tGO_REF:0000011\tISM\tInterPro:IPR001394\tF\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.46.0014\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1930\tTb927.11.1930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.46.0014\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1930\tTb927.11.1930\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001394\tP\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.46.0014\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1930\tTb927.11.1930\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.46.0014\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1940\tTb927.11.1940\t\tGO:1990900\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.46.0013\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1950\tTb927.11.1950\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.46.0012\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19520\tTb927.11.19520\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0084\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19520\tTb927.11.19520\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG), putative\tTb11.57.0084\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19540\tTb927.11.19540\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.57.0052\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19540\tTb927.11.19540\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.57.0052\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19620\tTb927.11.19620\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, pseudogene), putative\tTb11.32.0002\tpseudogenic_transcript\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19620\tTb927.11.19620\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, pseudogene), putative\tTb11.32.0002\tpseudogenic_transcript\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1980\tZC3H41\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein family member, putative\tTb11.46.0009\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1980\tZC3H41\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tzinc finger protein family member, putative\tTb11.46.0009\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1980\tZC3H41\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc finger protein family member, putative\tTb11.46.0009\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19800\tTb927.11.19800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.v5.0103\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19800\tTb927.11.19800\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.v5.0103\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19800\tTb927.11.19800\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.v5.0103\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19870\tTb927.11.19870\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.35.0001\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19870\tTb927.11.19870\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.35.0001\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1990\tTb927.11.1990\t\tGO:0004814\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00456\tF\targinyl-tRNA synthetase, putative\tTb11.46.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1990\tTb927.11.1990\t\tGO:0005737\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00456\tC\targinyl-tRNA synthetase, putative\tTb11.46.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1990\tTb927.11.1990\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\targinyl-tRNA synthetase, putative\tTb11.46.0008\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1990\tTb927.11.1990\t\tGO:0006420\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00456\tP\targinyl-tRNA synthetase, putative\tTb11.46.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1990\tTb927.11.1990\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\targinyl-tRNA synthetase, putative\tTb11.46.0008\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.200\tRPB6z\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase I subunit, putative\tTb11.03.0935|1RPB6\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.200\tRPB6z\t\tGO:0005736\tPMID:16730080\tIPI\tGeneDB:Tb927.8.5090\tC\tDNA-directed RNA polymerase I subunit, putative\tTb11.03.0935|1RPB6\tmRNA\ttaxon:185431\t20141211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.200\tRPB6z\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase I subunit, putative\tTb11.03.0935|1RPB6\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.200\tRPB6z\t\tGO:0006351\tGO_REF:0000012\tISA\tUniProtKB:RPAB2_YEAST\tP\tDNA-directed RNA polymerase I subunit, putative\tTb11.03.0935|1RPB6\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2000\tJMJ2\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tJumonji domain protein 2\tTb11.46.0007\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2000\tJMJ2\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tJumonji domain protein 2\tTb11.46.0007\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2000\tJMJ2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tJumonji domain protein 2\tTb11.46.0007\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2000\tJMJ2\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tJumonji domain protein 2\tTb11.46.0007\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2000\tJMJ2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tJumonji domain protein 2\tTb11.46.0007\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20090\tTb927.11.20090\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0007\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20090\tTb927.11.20090\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0007\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2010\tTb927.11.2010\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.46.0006\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2010\tTb927.11.2010\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.46.0006\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20100\tTb927.11.20100\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0008\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20100\tTb927.11.20100\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0008\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20190\tTb927.11.20190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.14.0015\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20190\tTb927.11.20190\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG), putative\tTb11.14.0015\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2020\tTb927.11.2020\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.46.0005\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2020\tTb927.11.2020\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.46.0005\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2020\tTb927.11.2020\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.46.0005\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20240\tTb927.11.20240\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0019\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20240\tTb927.11.20240\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0019\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2030\tTb927.11.2030\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.46.0004\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2030\tTb927.11.2030\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.46.0004\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2040\tTb927.11.2040\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSTE/STE11 serine/threonine-protein kinase, putative\tTb11.46.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2040\tTb927.11.2040\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\tTb11.46.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2050\tTb927.11.2050\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF00466\tF\t60S acidic ribosomal protein P0, putative\tTb11.46.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2050\tTb927.11.2050\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S acidic ribosomal protein P0, putative\tTb11.46.0002\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2050\tTb927.11.2050\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF00466\tP\t60S acidic ribosomal protein P0, putative\tTb11.46.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2050\tTb927.11.2050\t\tGO:0015934\tGO_REF:0000011\tISM\tPfam:PF00466\tC\t60S acidic ribosomal protein P0, putative\tTb11.46.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2050\tTb927.11.2050\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t60S acidic ribosomal protein P0, putative\tTb11.46.0002\tmRNA\ttaxon:185431\t20141201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20550\tTb927.11.20550\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.09.0003\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20550\tTb927.11.20550\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG), putative\tTb11.09.0003\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2060\tTb927.11.2060\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF00466\tF\t60S acidic ribosomal protein P0, putative\tTb11.46.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2060\tTb927.11.2060\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S acidic ribosomal protein P0, putative\tTb11.46.0001\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2060\tTb927.11.2060\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF00466\tP\t60S acidic ribosomal protein P0, putative\tTb11.46.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2060\tTb927.11.2060\t\tGO:0015934\tGO_REF:0000011\tISM\tPfam:PF00466\tC\t60S acidic ribosomal protein P0, putative\tTb11.46.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20700\tTb927.11.20700\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.38.0005\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20700\tTb927.11.20700\t\tGO:0020033\tPMID:6811137\tTAS\t\tP\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.38.0005\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20730\tTb927.11.20730\t\tGO:0006071\tGO_REF:0000002\tISS\t\tP\tglycerophosphoryl diester phosphodiesterase, putative\tTb11.01.0580\tmRNA\ttaxon:185431\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20730\tTb927.11.20730\t\tGO:0008889\tGO_REF:0000002\tISS\t\tF\tglycerophosphoryl diester phosphodiesterase, putative\tTb11.01.0580\tmRNA\ttaxon:185431\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20730\tTb927.11.20730\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tglycerophosphoryl diester phosphodiesterase, putative\tTb11.01.0580\tmRNA\ttaxon:185431\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2080\tTb927.11.2080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.18.0018\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2080\tTb927.11.2080\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.18.0018\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2080\tTb927.11.2080\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.18.0018\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2090\tEK1\t\tGO:0004305\tPMID:18489261\tIDA\t\tF\tcholine kinase\tTb11.18.0017\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2090\tEK1\t\tGO:0004305\tPMID:18587155\tIMP\t\tF\tcholine kinase\tTb11.18.0017\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2090\tEK1\t\tGO:0005829\tPMID:20382188\tIDA\t\tC\tcholine kinase\tTb11.18.0017\tmRNA\ttaxon:185431\t20100727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2090\tEK1\t\tGO:0006646\tPMID:18587155\tIMP\t\tP\tcholine kinase\tTb11.18.0017\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2090\tEK1\t\tGO:0006646\tPMID:18489261\tIDA\t\tP\tcholine kinase\tTb11.18.0017\tmRNA\ttaxon:185431\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.210\tTb927.11.210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0930\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.210\tTb927.11.210\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0930\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.210\tTb927.11.210\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0930\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2100\tTb927.11.2100\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDivergent AAA domain containing protein, putative\tTb11.18.0016\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2100\tTb927.11.2100\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tDivergent AAA domain containing protein, putative\tTb11.18.0016\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2110\tTb927.11.2110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSnf7, putative\tTb11.18.0015\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2110\tTb927.11.2110\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tSnf7, putative\tTb11.18.0015\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2110\tTb927.11.2110\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSnf7, putative\tTb11.18.0015\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2120\tNOC1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleolar complex protein 1, putative\tTb11.18.0014\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2120\tNOC1\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tNucleolar complex protein 1, putative\tTb11.18.0014\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2120\tNOC1\t\tGO:0005730\tPMID:34407985\tIDA\t\tC\tNucleolar complex protein 1, putative\tTb11.18.0014\tmRNA\ttaxon:185431\t20220209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2120\tNOC1\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tNucleolar complex protein 1, putative\tTb11.18.0014\tmRNA\ttaxon:185431\t20220209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2130\tRPN3\t\tGO:0004175\tPMID:11854272\tIGI\tUniProtKB:RPN3_YEAST\tF\tproteasome regulatory non-ATP-ase subunit 3\tTb11.18.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2130\tRPN3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 3\tTb11.18.0013\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2130\tRPN3\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 3\tTb11.18.0013\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2130\tRPN3\t\tGO:0006511\tPMID:11854272\tIDA\t\tP\tproteasome regulatory non-ATP-ase subunit 3\tTb11.18.0013\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2140\tTb927.11.2140\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tcyclic nucleotide-binding domain containing protein, putative\tTb11.18.0012\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2140\tTb927.11.2140\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tTb11.18.0012\tmRNA\ttaxon:185431\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2160\tTb927.11.2160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.57.0002\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2160\tTb927.11.2160\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.57.0002\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2160\tTb927.11.2160\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.57.0002\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2160\tTb927.11.2160\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.57.0002\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2160\tTb927.11.2160\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.57.0002\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2170\tTb927.11.2170\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.18.0010\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2180\tmt-SAF10\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 10\tTb11.18.0009\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2180\tmt-SAF10\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 10\tTb11.18.0009\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2190\tMIC10-2\t\tGO:0061617\tPMID:30415698\tIDA\t\tC\tMICOS complex subunit MIC10-2\tTb11.57.0003\tmRNA\ttaxon:185431\t20181204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.220\tTb927.11.220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0920\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.220\tTb927.11.220\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.03.0920\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.220\tTb927.11.220\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0920\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2200\tRPB11\t\tGO:0003899\tGO_REF:0000011\tISM\tPfam:PF01193\tF\tDNA-directed RNA polymerase II, putative\tTb11.57.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2200\tRPB11\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:Q9VJE4\tC\tDNA-directed RNA polymerase II, putative\tTb11.57.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2200\tRPB11\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA-directed RNA polymerase II, putative\tTb11.57.0004\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2200\tRPB11\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase II, putative\tTb11.57.0004\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2200\tRPB11\t\tGO:0006351\tGO_REF:0000011\tISM\tPfam:PF01193\tP\tDNA-directed RNA polymerase II, putative\tTb11.57.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2210\tTb927.11.2210\t\tGO:0004144\tPMID:20382188\tEXP\t\tF\tdiacylglycerol acyltransferase, putative\tTb11.18.0008\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2210\tTb927.11.2210\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tdiacylglycerol acyltransferase, putative\tTb11.18.0008\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2210\tTb927.11.2210\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tdiacylglycerol acyltransferase, putative\tTb11.18.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2210\tTb927.11.2210\t\tGO:0019432\tPMID:20382188\tEXP\t\tP\tdiacylglycerol acyltransferase, putative\tTb11.18.0008\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2220\tmt-SAF17\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 17\tTb11.18.0007\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2220\tmt-SAF17\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 17\tTb11.18.0007\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2220\tmt-SAF17\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 17\tTb11.18.0007\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2220\tmt-SAF17\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 17\tTb11.18.0007\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2230\tCAT\t\tGO:0004092\tGO_REF:0000012\tISA\tUniProtKB:P43155\tF\tcarnitine O-acetyltransferase, putative\tTb11.18.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2230\tCAT\t\tGO:0006091\tGO_REF:0000012\tISA\tUniProtKB:P43155\tP\tcarnitine O-acetyltransferase, putative\tTb11.18.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2230\tCAT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcarnitine O-acetyltransferase, putative\tTb11.18.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2240\tTb927.11.2240\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.57.0005\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2240\tTb927.11.2240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.57.0005\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2240\tTb927.11.2240\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.57.0005\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2240\tTb927.11.2240\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.57.0005\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2250\tTb927.11.2250\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tconserved protein, unknown function\tTb11.18.0005\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2250\tTb927.11.2250\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tconserved protein, unknown function\tTb11.18.0005\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2250\tTb927.11.2250\t\tGO:0010494\tPMID:26187993\tIDA\t\tC\tconserved protein, unknown function\tTb11.18.0005\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2250\tTb927.11.2250\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tconserved protein, unknown function\tTb11.18.0005\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2250\tTb927.11.2250\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tconserved protein, unknown function\tTb11.18.0005\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0000340\tGO_REF:0000024\tISO\tGeneDB:LmjF.27.1620\tF\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0000342\tGO_REF:0000024\tISO\tGeneDB:LmjF.27.1620\tF\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0000932\tPMID:23382864\tIDA\t\tC\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0003723\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0003743\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LmjF.27.1620\tC\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0006413\tPMID:15694484\tISA\t\tP\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0010494\tPMID:23382864\tIDA\t\tC\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0097165\tPMID:23382864\tIDA\t\tC\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2270\tIC140\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tComponent of motile flagella 73\tTb11.18.0003|CMF73\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2270\tIC140\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tComponent of motile flagella 73\tTb11.18.0003|CMF73\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2270\tIC140\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.27.1630\tC\tComponent of motile flagella 73\tTb11.18.0003|CMF73\tmRNA\ttaxon:185431\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2270\tIC140\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tComponent of motile flagella 73\tTb11.18.0003|CMF73\tmRNA\ttaxon:185431\t20090527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2280\tTb927.11.2280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tBRO1-like domain/ALIX V-shaped domain binding to HIV, putative\tTb11.18.0002\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2280\tTb927.11.2280\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tBRO1-like domain/ALIX V-shaped domain binding to HIV, putative\tTb11.18.0002\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2290\tTb927.11.2290\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.18.0001\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2290\tTb927.11.2290\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.18.0001\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0000365\tPMID:26727667\tIMP\t\tP\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20161130\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0003730\tGO_REF:0000012\tISA\tUniProtKB:Q9LKF9\tF\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0005847\tPMID:26727667\tIPI\tGeneDB:Tb927.11.14560\tC\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20161130\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0005847\tGO_REF:0000012\tISA\tUniProtKB:Q9LKF9\tC\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0006378\tGO_REF:0000012\tISA\tUniProtKB:Q9LKF9\tP\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20161130\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0006379\tGO_REF:0000012\tISA\tUniProtKB:Q9LKF9\tP\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2300\tERF1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\teukaryotic peptide chain release factor subunit 1, putative\tTb11.22.0012\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2300\tERF1\t\tGO:0003747\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00108\tF\teukaryotic peptide chain release factor subunit 1, putative\tTb11.22.0012\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2300\tERF1\t\tGO:0006412\tGO_REF:0000024\tISS\tInterPro:IPR005140|InterPro:IPR005141\tP\teukaryotic peptide chain release factor subunit 1, putative\tTb11.22.0012\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2300\tERF1\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\teukaryotic peptide chain release factor subunit 1, putative\tTb11.22.0012\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2330\tTb927.11.2330\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR000594\tF\tmolybdopterin synthase sulphurylase protein, putative\tTb11.22.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2330\tTb927.11.2330\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tmolybdopterin synthase sulphurylase protein, putative\tTb11.22.0008\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2330\tTb927.11.2330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmolybdopterin synthase sulphurylase protein, putative\tTb11.22.0008\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2330\tTb927.11.2330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmolybdopterin synthase sulphurylase protein, putative\tTb11.22.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2340\tTb927.11.2340\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.22.0007\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2350\tTb927.11.2350\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.22.0006\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2360\tTb927.11.2360\t\tGO:0004826\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00471\tF\tphenylalanyl-tRNA synthetase (beta subunit), putative\tTb11.22.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2360\tTb927.11.2360\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphenylalanyl-tRNA synthetase (beta subunit), putative\tTb11.22.0005\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2360\tTb927.11.2360\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q9VCA5\tC\tphenylalanyl-tRNA synthetase (beta subunit), putative\tTb11.22.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2360\tTb927.11.2360\t\tGO:0006432\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00471\tP\tphenylalanyl-tRNA synthetase (beta subunit), putative\tTb11.22.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2360\tTb927.11.2360\t\tGO:0009328\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00471\tC\tphenylalanyl-tRNA synthetase (beta subunit), putative\tTb11.22.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0000902\tPMID:31270172\tIMP\t\tP\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20200911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0005515\tPMID:23560737\tIPI\tGeneDB:Tb927.9.13520|GeneDB:Tb927.7.5760\tF\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20150422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0005515\tPMID:31413174\tIPI\tGeneDB:Tb927.11.16070\tF\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20190918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0005634\tPMID:23560737\tIDA\t\tC\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20150422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0005737\tPMID:23560737\tIDA\t\tC\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20150422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0006364\tPMID:31270172\tIMP\t\tP\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20200911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0006406\tPMID:19596809\tIMP\t\tP\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20150422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2370\tMEX67\t\tGO:0042254\tPMID:31270172\tIMP\t\tP\tmRNA export factor MEX67\tTb11.22.0004\tmRNA\ttaxon:185431\t20200911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0004618\tGO_REF:0000011\tISM\tInterPro:IPR001576\tF\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0005929\tPMID:25050549\tIDA\t\tC\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20171002\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0006096\tGO_REF:0000011\tISM\tInterPro:IPR001576\tP\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.240\tTb927.11.240\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0900\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.240\tTb927.11.240\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.03.0900\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.240\tTb927.11.240\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0900\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2400\tTb927.11.2400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFlabarin-like protein\tTb11.02.0010\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2400\tTb927.11.2400\t\tGO:0005929\tPMID:27779220\tIDA\t\tC\tFlabarin-like protein\tTb11.02.0010\tmRNA\ttaxon:185431\t20170207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2400\tTb927.11.2400\t\tGO:0060170\tPMID:27779220\tIDA\t\tC\tFlabarin-like protein\tTb11.02.0010\tmRNA\ttaxon:185431\t20170207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2400\tTb927.11.2400\t\tGO:0060170\tPMID:30550896\tHDA\t\tC\tFlabarin-like protein\tTb11.02.0010\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2410\tTb927.11.2410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFlabarin, putative\tTb11.22.0001\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2410\tTb927.11.2410\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tFlabarin, putative\tTb11.22.0001\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2410\tTb927.11.2410\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LdBPK_271630.1\tC\tFlabarin, putative\tTb11.22.0001\tmRNA\ttaxon:185431\t20171122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2410\tTb927.11.2410\t\tGO:0060170\tGO_REF:0000109\tIDA\t\tC\tFlabarin, putative\tTb11.22.0001\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2420\tTTLL6B\t\tGO:0000226\tPMID:32843576\tIMP\t\tP\tTubulin-tyrosine ligase family, putative\tTb11.02.0020\tmRNA\ttaxon:185431\t20210730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2420\tTTLL6B\t\tGO:0000281\tPMID:32843576\tIMP\t\tP\tTubulin-tyrosine ligase family, putative\tTb11.02.0020\tmRNA\ttaxon:185431\t20210730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2420\tTTLL6B\t\tGO:0018095\tPMID:32843576\tIMP\t\tP\tTubulin-tyrosine ligase family, putative\tTb11.02.0020\tmRNA\ttaxon:185431\t20210729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2420\tTTLL6B\t\tGO:0060285\tPMID:32843576\tIMP\t\tP\tTubulin-tyrosine ligase family, putative\tTb11.02.0020\tmRNA\ttaxon:185431\t20210730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2420\tTTLL6B\t\tGO:0070740\tPMID:32843576\tIMP\t\tF\tTubulin-tyrosine ligase family, putative\tTb11.02.0020\tmRNA\ttaxon:185431\t20210729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2430\tDYNC2H2\t\tGO:0003777\tGO_REF:0000011\tISM\tInterPro:IPR004273\tF\tCytoplasmic dynein 2 heavy chain (DYNC2H2), putative\tTb11.02.0030|DHC1b\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2430\tDYNC2H2\t\tGO:0007018\tPMID:17897317\tTAS\t\tP\tCytoplasmic dynein 2 heavy chain (DYNC2H2), putative\tTb11.02.0030|DHC1b\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2430\tDYNC2H2\t\tGO:0007052\tPMID:17897317\tTAS\t\tP\tCytoplasmic dynein 2 heavy chain (DYNC2H2), putative\tTb11.02.0030|DHC1b\tmRNA\ttaxon:185431\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2430\tDYNC2H2\t\tGO:0007059\tPMID:17897317\tTAS\t\tP\tCytoplasmic dynein 2 heavy chain (DYNC2H2), putative\tTb11.02.0030|DHC1b\tmRNA\ttaxon:185431\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2430\tDYNC2H2\t\tGO:0030286\tGO_REF:0000011\tISM\tInterPro:IPR004273\tC\tCytoplasmic dynein 2 heavy chain (DYNC2H2), putative\tTb11.02.0030|DHC1b\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2430\tDYNC2H2\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\tCytoplasmic dynein 2 heavy chain (DYNC2H2), putative\tTb11.02.0030|DHC1b\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2430\tDYNC2H2\t\tGO:0072382\tPMID:17897317\tTAS\t\tP\tCytoplasmic dynein 2 heavy chain (DYNC2H2), putative\tTb11.02.0030|DHC1b\tmRNA\ttaxon:185431\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2430\tDYNC2H2\t\tGO:0097546\tPMID:32682799\tIDA\t\tC\tCytoplasmic dynein 2 heavy chain (DYNC2H2), putative\tTb11.02.0030|DHC1b\tmRNA\ttaxon:185431\t20210731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2440\tTBCCD1\t\tGO:0005794\tPMID:24101722\tIDA\t\tC\tTubulin cofactor C domain-containing protein 1\tTb11.02.0040\tmRNA\ttaxon:185431\t20140414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2440\tTBCCD1\t\tGO:0005814\tPMID:24101722\tIDA\t\tC\tTubulin cofactor C domain-containing protein 1\tTb11.02.0040\tmRNA\ttaxon:185431\t20140414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2440\tTBCCD1\t\tGO:0007097\tPMID:24101722\tIMP\t\tP\tTubulin cofactor C domain-containing protein 1\tTb11.02.0040\tmRNA\ttaxon:185431\t20170823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2440\tTBCCD1\t\tGO:0033955\tPMID:24101722\tIMP\t\tP\tTubulin cofactor C domain-containing protein 1\tTb11.02.0040\tmRNA\ttaxon:185431\t20140414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2440\tTBCCD1\t\tGO:0045177\tPMID:24101722\tIDA\t\tC\tTubulin cofactor C domain-containing protein 1\tTb11.02.0040\tmRNA\ttaxon:185431\t20140414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2440\tTBCCD1\t\tGO:0048313\tPMID:24101722\tIMP\t\tP\tTubulin cofactor C domain-containing protein 1\tTb11.02.0040\tmRNA\ttaxon:185431\t20140414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2470\tTb927.11.2470\t\tGO:0004177\tGO_REF:0000011\tISM\tInterPro:IPR000819\tF\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.0070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2470\tTb927.11.2470\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000819\tC\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.0070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2470\tTb927.11.2470\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.0070\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2470\tTb927.11.2470\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.0070\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2470\tTb927.11.2470\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR000819\tP\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.0070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2490\tTb927.11.2490\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tUnc104-like kinesin, putative\tTb11.02.0090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2490\tTb927.11.2490\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUnc104-like kinesin, putative\tTb11.02.0090\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2490\tTb927.11.2490\t\tGO:0005871\tPMID:16481395\tEXP\t\tC\tUnc104-like kinesin, putative\tTb11.02.0090\tmRNA\ttaxon:185431\t20110420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2490\tTb927.11.2490\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tUnc104-like kinesin, putative\tTb11.02.0090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2490\tTb927.11.2490\t\tGO:0047496\tGO_REF:0000024\tISS\t\tP\tUnc104-like kinesin, putative\tTb11.02.0090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.250\tTb927.11.250\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:P15374\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.03.0890\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.250\tTb927.11.250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.03.0890\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.250\tTb927.11.250\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001578\tP\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.03.0890\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.250\tTb927.11.250\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.03.0890\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.250\tTb927.11.250\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.03.0890\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2500\tMCP1\t\tGO:0004181\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504153.160\tF\tmetallo-peptidase, Clan MA(E) Family M32\tTb11.02.0100\tmRNA\ttaxon:185431\t20120618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2500\tMCP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmetallo-peptidase, Clan MA(E) Family M32\tTb11.02.0100\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2500\tMCP1\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504153.160\tC\tmetallo-peptidase, Clan MA(E) Family M32\tTb11.02.0100\tmRNA\ttaxon:185431\t20120618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2500\tMCP1\t\tGO:0006508\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504153.160\tP\tmetallo-peptidase, Clan MA(E) Family M32\tTb11.02.0100\tmRNA\ttaxon:185431\t20120618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2500\tMCP1\t\tGO:0006518\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504153.160\tP\tmetallo-peptidase, Clan MA(E) Family M32\tTb11.02.0100\tmRNA\ttaxon:185431\t20120618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2510\tTb927.11.2510\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNUC173 domain containing protein, putative\tTb11.02.0110\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2520\tUAP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUDP-n-acetylglucosamine pyrophosphorylase\tTb11.02.0120\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2520\tUAP\t\tGO:0006011\tGO_REF:0000011\tISM\tInterPro:IPR002618\tP\tUDP-n-acetylglucosamine pyrophosphorylase\tTb11.02.0120\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2520\tUAP\t\tGO:0016779\tGO_REF:0000011\tISM\tInterPro:IPR002618\tF\tUDP-n-acetylglucosamine pyrophosphorylase\tTb11.02.0120\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2520\tUAP\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tUDP-n-acetylglucosamine pyrophosphorylase\tTb11.02.0120\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2520\tUAP\t\tGO:0020015\tPMID:18381290\tIDA\t\tC\tUDP-n-acetylglucosamine pyrophosphorylase\tTb11.02.0120\tmRNA\ttaxon:185431\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2530\tmS52\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb927.11.16860\tP\tMitochondrial SSU ribosomal protein, putative\tTb11.02.0130\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2530\tmS52\t\tGO:0003723\tPMID:18951088\tIDA\t\tF\tMitochondrial SSU ribosomal protein, putative\tTb11.02.0130\tmRNA\ttaxon:185431\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2530\tmS52\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial SSU ribosomal protein, putative\tTb11.02.0130\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2530\tmS52\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitochondrial SSU ribosomal protein, putative\tTb11.02.0130\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2530\tmS52\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMitochondrial SSU ribosomal protein, putative\tTb11.02.0130\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2530\tmS52\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.11.16860\tC\tMitochondrial SSU ribosomal protein, putative\tTb11.02.0130\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2530\tmS52\t\tGO:0043631\tPMID:18951088\tIDA\t\tP\tMitochondrial SSU ribosomal protein, putative\tTb11.02.0130\tmRNA\ttaxon:185431\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2530\tmS52\t\tGO:0048255\tPMID:18951088\tIDA\t\tP\tMitochondrial SSU ribosomal protein, putative\tTb11.02.0130\tmRNA\ttaxon:185431\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2540\tTb927.11.2540\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0140\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2550\tTb927.11.2550\t\tGO:0003684\tGO_REF:0000011\tISM\tInterPro:IPR001553\tF\trecombinase rad51, putative\tTb11.02.0150\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2550\tTb927.11.2550\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\trecombinase rad51, putative\tTb11.02.0150\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2550\tTb927.11.2550\t\tGO:0006281\tGO_REF:0000011\tISM\tInterPro:IPR001553\tP\trecombinase rad51, putative\tTb11.02.0150\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2550\tTb927.11.2550\t\tGO:0006310\tGO_REF:0000012\tISA\tUniProtKB:O43502\tP\trecombinase rad51, putative\tTb11.02.0150\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2570\tTb927.11.2570\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0170\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2580\tPOMP11\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504153.250\tC\tPresent in the outer mitochondrial membrane proteome 11\tTb11.02.0180\tmRNA\ttaxon:185431\t20150318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2580\tPOMP11\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPresent in the outer mitochondrial membrane proteome 11\tTb11.02.0180\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2580\tPOMP11\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 11\tTb11.02.0180\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2580\tPOMP11\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 11\tTb11.02.0180\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2590\tFAZ12\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tFlagellum attachment zone protein 12\tTb11.02.0190\tmRNA\ttaxon:185431\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.260\tPIFTF6\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\twd repeat-containing protein 19\tTb11.03.0880|IFT144\tmRNA\ttaxon:185431\t20161207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.260\tPIFTF6\t\tGO:0030990\tGO_REF:0000109\tIDA\t\tC\twd repeat-containing protein 19\tTb11.03.0880|IFT144\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.260\tPIFTF6\t\tGO:0035721\tPMID:18094047\tIMP\t\tP\twd repeat-containing protein 19\tTb11.03.0880|IFT144\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.260\tPIFTF6\t\tGO:0035735\tPMID:18094047\tIMP\t\tP\twd repeat-containing protein 19\tTb11.03.0880|IFT144\tmRNA\ttaxon:185431\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2600\tTb927.11.2600\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0200\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2610\tCAP50\t\tGO:0000281\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 50 kDa\tTb11.02.0210\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2610\tCAP50\t\tGO:0005856\tPMID:35447115\tIDA\t\tC\tCytoskeleton-associated protein 50 kDa\tTb11.02.0210\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2610\tCAP50\t\tGO:0005856\tPMID:25972344\tIDA\t\tC\tCytoskeleton-associated protein 50 kDa\tTb11.02.0210\tmRNA\ttaxon:185431\t20160913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2610\tCAP50\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tCytoskeleton-associated protein 50 kDa\tTb11.02.0210\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2610\tCAP50\t\tGO:0034613\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 50 kDa\tTb11.02.0210\tmRNA\ttaxon:185431\t20220425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2610\tCAP50\t\tGO:1990386\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 50 kDa\tTb11.02.0210\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2620\tTb927.11.2620\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0220\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2630\tTb927.11.2630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdiphthamide biosynthesis enzyme Dph1/Dph2 domain containing protein, putative\tTb11.02.0230\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2640\tNOP53\t\tGO:0003924\tGO_REF:0000012\tISA\tUniProtKB:Q13823\tF\tras-like small GTPase, putative\tTb11.02.0240|NST\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2640\tNOP53\t\tGO:0005525\tGO_REF:0000012\tISA\tUniProtKB:Q13823\tF\tras-like small GTPase, putative\tTb11.02.0240|NST\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2640\tNOP53\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tras-like small GTPase, putative\tTb11.02.0240|NST\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2640\tNOP53\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tras-like small GTPase, putative\tTb11.02.0240|NST\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2640\tNOP53\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tras-like small GTPase, putative\tTb11.02.0240|NST\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2640\tNOP53\t\tGO:0005730\tPMID:29931198\tIDA\t\tC\tras-like small GTPase, putative\tTb11.02.0240|NST\tmRNA\ttaxon:185431\t20180626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2640\tNOP53\t\tGO:0005819\tPMID:29931198\tIDA\t\tC\tras-like small GTPase, putative\tTb11.02.0240|NST\tmRNA\ttaxon:185431\t20190111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2650\tTb927.11.2650\t\tGO:0005739\tPMID:15223320\tISM\t\tC\theat shock protein 84, putative\tTb11.02.0250\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2650\tTb927.11.2650\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\theat shock protein 84, putative\tTb11.02.0250\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2650\tTb927.11.2650\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\theat shock protein 84, putative\tTb11.02.0250\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2650\tTb927.11.2650\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\theat shock protein 84, putative\tTb11.02.0250\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2650\tTb927.11.2650\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001404\tP\theat shock protein 84, putative\tTb11.02.0250\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2650\tTb927.11.2650\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\theat shock protein 84, putative\tTb11.02.0250\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2650\tTb927.11.2650\t\tGO:0042623\tGO_REF:0000012\tISA\tUniProtKB:P12861\tF\theat shock protein 84, putative\tTb11.02.0250\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2660\tGRASP\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tGolgi reassembly stacking protein (GRASP homologue), putative\tTb11.02.0260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2660\tGRASP\t\tGO:0005794\tPMID:30550896\tHDA\t\tC\tGolgi reassembly stacking protein (GRASP homologue), putative\tTb11.02.0260\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2660\tGRASP\t\tGO:0005795\tGO_REF:0000011\tISM\tPfam:PF04495\tC\tGolgi reassembly stacking protein (GRASP homologue), putative\tTb11.02.0260\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2660\tGRASP\t\tGO:0007030\tGO_REF:0000011\tISM\tPfam:PF04495\tP\tGolgi reassembly stacking protein (GRASP homologue), putative\tTb11.02.0260\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2670\tNUP59\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP59\tTb11.02.0270\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2670\tNUP59\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP59\tTb11.02.0270\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2680\tTb927.11.2680\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tATP synthase regulation protein NCA2, putative\tTb11.02.0280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2690\tASCT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSuccinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial\tTb11.02.0290\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2690\tASCT\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tSuccinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial\tTb11.02.0290\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2690\tASCT\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSuccinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial\tTb11.02.0290\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2690\tASCT\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tSuccinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial\tTb11.02.0290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2690\tASCT\t\tGO:0005739\tPMID:15326192\tIDA\t\tC\tSuccinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial\tTb11.02.0290\tmRNA\ttaxon:185431\t20171005\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2690\tASCT\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR004165\tP\tSuccinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial\tTb11.02.0290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2690\tASCT\t\tGO:0008410\tGO_REF:0000011\tISM\tInterPro:IPR004165\tF\tSuccinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial\tTb11.02.0290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.270\tMCP10\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\tTb11.03.0870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.270\tMCP10\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\tTb11.03.0870\tmRNA\ttaxon:185431\t20100805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.270\tMCP10\t\tGO:0005739\tPMID:19463859\tIDA\t\tC\tmitochondrial carrier protein\tTb11.03.0870\tmRNA\ttaxon:185431\t20110718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.270\tMCP10\t\tGO:0005743\tGO_REF:0000011\tISM\tInterPro:IPR002067\tC\tmitochondrial carrier protein\tTb11.03.0870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.270\tMCP10\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.03.0870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2700\tBBP69\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\tTb11.02.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2700\tBBP69\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\tTb11.02.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2700\tBBP69\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tBasal body protein\tTb11.02.0300\tmRNA\ttaxon:185431\t20170106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2700\tBBP69\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\tTb11.02.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2700\tBBP69\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tBasal body protein\tTb11.02.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2710\tCDC45\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tCell division cycle 45\tTb11.02.0310\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2710\tCDC45\t\tGO:0005634\tPMID:21799014\tIDA\t\tC\tCell division cycle 45\tTb11.02.0310\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2710\tCDC45\t\tGO:0005737\tPMID:21799014\tIDA\t\tC\tCell division cycle 45\tTb11.02.0310\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2710\tCDC45\t\tGO:0006270\tPMID:21799014\tIMP\t\tP\tCell division cycle 45\tTb11.02.0310\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2710\tCDC45\t\tGO:0006270\tGO_REF:0000011\tISM\tPfam:PF02724\tP\tCell division cycle 45\tTb11.02.0310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2710\tCDC45\t\tGO:0044786\tPMID:21799014\tIMP\t\tP\tCell division cycle 45\tTb11.02.0310\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2710\tCDC45\t\tGO:0071162\tPMID:21799014\tIDA\t\tC\tCell division cycle 45\tTb11.02.0310\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2720\tTb927.11.2720\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.0320\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2730\tgalE\t\tGO:0003978\tGO_REF:0000002\tISS\t\tF\tUDP-galactose 4-epimerase\tUDPGE|Tb11.02.0330\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2730\tgalE\t\tGO:0003978\tPMID:11983889\tIDA\t\tF\tUDP-galactose 4-epimerase\tUDPGE|Tb11.02.0330\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2730\tgalE\t\tGO:0006012\tPMID:11983889\tIGI\tUniProtKB:GALE_ECOLI\tP\tUDP-galactose 4-epimerase\tUDPGE|Tb11.02.0330\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2730\tgalE\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tUDP-galactose 4-epimerase\tUDPGE|Tb11.02.0330\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2750\tPOMP12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 12\tTb11.02.0350\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2750\tPOMP12\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 12\tTb11.02.0350\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2760\tTb927.11.2760\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0351\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2790\tCFAP91\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCilia- and flagella-associated protein 91, putative\tMAATS1|Tb11.02.0354\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2790\tCFAP91\t\tGO:0005929\tPMID:32161152\tIDA\t\tC\tCilia- and flagella-associated protein 91, putative\tMAATS1|Tb11.02.0354\tmRNA\ttaxon:185431\t20200903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2790\tCFAP91\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tCilia- and flagella-associated protein 91, putative\tMAATS1|Tb11.02.0354\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2790\tCFAP91\t\tGO:0005930\tPMID:32161152\tIDA\t\tC\tCilia- and flagella-associated protein 91, putative\tMAATS1|Tb11.02.0354\tmRNA\ttaxon:185431\t20200903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2790\tCFAP91\t\tGO:0060285\tPMID:32161152\tIMP\t\tP\tCilia- and flagella-associated protein 91, putative\tMAATS1|Tb11.02.0354\tmRNA\ttaxon:185431\t20200903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.280\tTb927.11.280\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0860\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2800\tTb927.11.2800\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.0355\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0000281\tPMID:18545648\tIMP\t\tP\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0005515\tPMID:18545648\tIPI\tGeneDB:Tb11.01.0330\tF\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0005634\tPMID:18545648\tIDA\t\tC\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0005819\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0005871\tPMID:16481395\tEXP\t\tC\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20110420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0007059\tPMID:18545648\tIMP\t\tP\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0032133\tPMID:18545648\tIDA\t\tC\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20100127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0051225\tPMID:18545648\tIMP\t\tP\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2880\tKIN-A\t\tGO:0051233\tPMID:18545648\tIDA\t\tC\tkinesin, putative\tTb11.02.0400\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.290\tTb927.11.290\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPhosphatase and tensin homolog, putative\tTb11.03.0850\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.290\tTb927.11.290\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tPhosphatase and tensin homolog, putative\tTb11.03.0850\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.290\tTb927.11.290\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tPhosphatase and tensin homolog, putative\tTb11.03.0850\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2900\tZNHIT3\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tHIT zinc finger, putative\tTb11.02.0420\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2900\tZNHIT3\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tHIT zinc finger, putative\tTb11.02.0420\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2900\tZNHIT3\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tHIT zinc finger, putative\tTb11.02.0420\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2900\tZNHIT3\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tHIT zinc finger, putative\tTb11.02.0420\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2910\tiPGAM\t\tGO:0004619\tPMID:19781556\tISO\tGeneDB:LmxM.32.2110\tF\tphosphoglycerate mutase, putative\tTb11.02.0430\tmRNA\ttaxon:185431\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2910\tiPGAM\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphoglycerate mutase, putative\tTb11.02.0430\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2910\tiPGAM\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tphosphoglycerate mutase, putative\tTb11.02.0430\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2910\tiPGAM\t\tGO:0006096\tPMID:19781556\tISO\tGeneDB:LmxM.32.2110\tP\tphosphoglycerate mutase, putative\tTb11.02.0430\tmRNA\ttaxon:185431\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2910\tiPGAM\t\tGO:0050897\tPMID:19781556\tISO\tGeneDB:LmxM.32.2110\tF\tphosphoglycerate mutase, putative\tTb11.02.0430\tmRNA\ttaxon:185431\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2920\tTb927.11.2920\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR001345\tF\tglycerolphosphate mutase, putative\tTb11.02.0440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2920\tTb927.11.2920\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglycerolphosphate mutase, putative\tTb11.02.0440\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2920\tTb927.11.2920\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tglycerolphosphate mutase, putative\tTb11.02.0440\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2920\tTb927.11.2920\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tglycerolphosphate mutase, putative\tTb11.02.0440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2920\tTb927.11.2920\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001345\tP\tglycerolphosphate mutase, putative\tTb11.02.0440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2930\tTb927.11.2930\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmembrane-associated protein, putative\tTb11.02.0445\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2940\tTb927.11.2940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2940\tTb927.11.2940\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2940\tTb927.11.2940\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2950\tNUP89\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP89\tTb11.02.0460\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2950\tNUP89\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP89\tTb11.02.0460\tmRNA\ttaxon:185431\t20090616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2950\tNUP89\t\tGO:0031080\tPMID:26891179\tIDA\t\tC\tNucleoporin NUP89\tTb11.02.0460\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2960\tTb927.11.2960\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0465\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2970\tTb927.11.2970\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0470\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2970\tTb927.11.2970\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0470\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2990\tKREPB4\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00806\tF\tKREPB4\tTb11.02.0490|MP46\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2990\tKREPB4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tKREPB4\tTb11.02.0490|MP46\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2990\tKREPB4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tKREPB4\tTb11.02.0490|MP46\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2990\tKREPB4\t\tGO:0009451\tPMID:12649499\tTAS\t\tP\tKREPB4\tTb11.02.0490|MP46\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2990\tKREPB4\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPB4\tTb11.02.0490|MP46\tmRNA\ttaxon:185431\t20100208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2990\tKREPB4\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tKREPB4\tTb11.02.0490|MP46\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2990\tKREPB4\t\tGO:0045293\tPMID:12649499\tIDA\t\tC\tKREPB4\tTb11.02.0490|MP46\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.300\tTb927.11.300\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\thypothetical protein, conserved\tTb11.03.0840\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.300\tTb927.11.300\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\thypothetical protein, conserved\tTb11.03.0840\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3000\tTb927.11.3000\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001569\tF\t60S ribosomal protein L37, putative\tTb11.02.0500\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3000\tTb927.11.3000\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001569\tP\t60S ribosomal protein L37, putative\tTb11.02.0500\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3010\tPRORP2\t\tGO:0004526\tPMID:22840392\tIDA\t\tF\tribonuclease P\tTb11.02.0510\tmRNA\ttaxon:185431\t20170704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3010\tPRORP2\t\tGO:0005739\tPMID:22840392\tIDA\t\tC\tribonuclease P\tTb11.02.0510\tmRNA\ttaxon:185431\t20170704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3010\tPRORP2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tribonuclease P\tTb11.02.0510\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3010\tPRORP2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tribonuclease P\tTb11.02.0510\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0004749\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01251\tF\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0005524\tGO_REF:0000012\tISA\tUniProtKB:AAA29262.1\tF\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0009152\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01251\tP\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0020015\tPMID:18242729\tIDA\t\tC\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20160919\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3040\tTb927.11.3040\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein\tTb11.02.0540\tmRNA\ttaxon:185431\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3050\tTb927.11.3050\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\thypothetical protein\tTb11.02.0550\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3050\tTb927.11.3050\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.02.0550\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3060\tTb927.11.3060\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tPhosphate transport (Pho88), putative\tTb11.02.0560\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3060\tTb927.11.3060\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tPhosphate transport (Pho88), putative\tTb11.02.0560\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3070\tRRB1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tribosome assembly protein RRB1, putative\tTb11.02.0570\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3070\tRRB1\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tribosome assembly protein RRB1, putative\tTb11.02.0570\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3070\tRRB1\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tribosome assembly protein RRB1, putative\tTb11.02.0570\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3070\tRRB1\t\tGO:0005730\tGO_REF:0000002\tISA\tUniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tC\tribosome assembly protein RRB1, putative\tTb11.02.0570\tmRNA\ttaxon:185431\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3070\tRRB1\t\tGO:0042254\tGO_REF:0000002\tISA\tUniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tP\tribosome assembly protein RRB1, putative\tTb11.02.0570\tmRNA\ttaxon:185431\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3080\tTb927.11.3080\t\tGO:0016192\tGO_REF:0000011\tISM\tInterPro:IPR005024\tP\tvesicular protein trafficking mediator, putative\tTb11.02.0580\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3090\tFOPNL\t\tGO:0031514\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_MOUSE\tC\tLisH domain-containing protein FOPNL, putative\tTb11.02.0590|FOR20\tmRNA\ttaxon:185431\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3090\tFOPNL\t\tGO:0036064\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_MOUSE\tC\tLisH domain-containing protein FOPNL, putative\tTb11.02.0590|FOR20\tmRNA\ttaxon:185431\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3090\tFOPNL\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tLisH domain-containing protein FOPNL, putative\tTb11.02.0590|FOR20\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3090\tFOPNL\t\tGO:0060271\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_HUMAN\tP\tLisH domain-containing protein FOPNL, putative\tTb11.02.0590|FOR20\tmRNA\ttaxon:185431\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3100\tPOMP13\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 13\tTb11.02.0600\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3100\tPOMP13\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tPresent in the outer mitochondrial membrane proteome 13\tTb11.02.0600\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3120\tNOG1\t\tGO:0005525\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00650\tF\tOligopeptidase B\tOPB3|Tb11.02.0620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3120\tNOG1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tOligopeptidase B\tOPB3|Tb11.02.0620\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3120\tNOG1\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:Q9U6A9\tC\tOligopeptidase B\tOPB3|Tb11.02.0620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3120\tNOG1\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tOligopeptidase B\tOPB3|Tb11.02.0620\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3120\tNOG1\t\tGO:0042254\tGO_REF:0000012\tISA\tUniProtKB:Q9U6A9\tP\tOligopeptidase B\tOPB3|Tb11.02.0620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3130\tGAT2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003439\tF\tglycosomal transporter (GAT2)\tTb11.02.0630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3130\tGAT2\t\tGO:0015908\tPMID:16754359\tIDA\t\tP\tglycosomal transporter (GAT2)\tTb11.02.0630\tmRNA\ttaxon:185431\t20120823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3130\tGAT2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglycosomal transporter (GAT2)\tTb11.02.0630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3130\tGAT2\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tglycosomal transporter (GAT2)\tTb11.02.0630\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3130\tGAT2\t\tGO:0042626\tGO_REF:0000011\tISM\tInterPro:IPR003439\tF\tglycosomal transporter (GAT2)\tTb11.02.0630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3130\tGAT2\t\tGO:0046860\tPMID:16754359\tIDA\t\tC\tglycosomal transporter (GAT2)\tTb11.02.0630\tmRNA\ttaxon:185431\t20120823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3140\tDYRK2\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tdual specificity tyrosine-phosphorylation-regulated kinase 2, putative\tTb11.02.0640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3140\tDYRK2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tdual specificity tyrosine-phosphorylation-regulated kinase 2, putative\tTb11.02.0640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3140\tDYRK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tdual specificity tyrosine-phosphorylation-regulated kinase 2, putative\tTb11.02.0640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3170\tTb927.11.3170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDer1-like family, putative\tTb11.02.0670\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3190\tTb927.11.3190\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0690\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3190\tTb927.11.3190\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0690\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.320\tTb927.11.320\t\tGO:0003777\tGO_REF:0000011\tISM\tInterPro:IPR001372\tF\tdynein light chain 1, putative\tTb11.03.0815\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.320\tTb927.11.320\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001372\tC\tdynein light chain 1, putative\tTb11.03.0815\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.320\tTb927.11.320\t\tGO:0007017\tGO_REF:0000011\tISM\tInterPro:IPR001372\tP\tdynein light chain 1, putative\tTb11.03.0815\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.320\tTb927.11.320\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tdynein light chain 1, putative\tTb11.03.0815\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3220\tmca1\t\tGO:0004197\tPMID:12062425\tTAS\t\tF\tmetacaspase\tTb11.02.0730\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3220\tmca1\t\tGO:0005739\tPMID:12062425\tIDA\t\tC\tmetacaspase\tTb11.02.0730\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3220\tmca1\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001309\tP\tmetacaspase\tTb11.02.0730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3220\tmca1\t\tGO:0007005\tPMID:12062425\tIDA\t\tP\tmetacaspase\tTb11.02.0730\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3230\tTb927.11.3230\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000552\tF\t60S ribosomal protein L44\tTb11.02.0740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3230\tTb927.11.3230\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000552\tC\t60S ribosomal protein L44\tTb11.02.0740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3230\tTb927.11.3230\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000552\tP\t60S ribosomal protein L44\tTb11.02.0740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3240\tTCP-1-zeta\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tT-complex protein 1, zeta subunit, putative\tTb11.02.0750\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3240\tTCP-1-zeta\t\tGO:0005832\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tC\tT-complex protein 1, zeta subunit, putative\tTb11.02.0750\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3240\tTCP-1-zeta\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, zeta subunit, putative\tTb11.02.0750\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3240\tTCP-1-zeta\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, zeta subunit, putative\tTb11.02.0750\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3240\tTCP-1-zeta\t\tGO:0051726\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tP\tT-complex protein 1, zeta subunit, putative\tTb11.02.0750\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3250\tOADbeta\t\tGO:0003777\tGO_REF:0000011\tISM\tInterPro:IPR004273\tF\tdynein heavy chain, putative\tTb11.02.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3250\tOADbeta\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\tdynein heavy chain, putative\tTb11.02.0760\tmRNA\ttaxon:185431\t20161207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3250\tOADbeta\t\tGO:0005930\tPMID:30550896\tHDA\t\tC\tdynein heavy chain, putative\tTb11.02.0760\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3250\tOADbeta\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tdynein heavy chain, putative\tTb11.02.0760\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3250\tOADbeta\t\tGO:0007018\tGO_REF:0000011\tISM\tInterPro:IPR004273\tP\tdynein heavy chain, putative\tTb11.02.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3250\tOADbeta\t\tGO:0030286\tGO_REF:0000011\tISM\tInterPro:IPR004273\tC\tdynein heavy chain, putative\tTb11.02.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3260\tPOLID\t\tGO:0003887\tGO_REF:0000011\tISM\tInterPro:IPR001098\tF\tmitochondrial DNA polymerase I protein D, putative\tTb11.02.0770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3260\tPOLID\t\tGO:0005739\tPMID:18849470\tIDA\t\tC\tmitochondrial DNA polymerase I protein D, putative\tTb11.02.0770\tmRNA\ttaxon:185431\t20120420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3260\tPOLID\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial DNA polymerase I protein D, putative\tTb11.02.0770\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3260\tPOLID\t\tGO:0006260\tGO_REF:0000011\tISM\tInterPro:IPR001098\tP\tmitochondrial DNA polymerase I protein D, putative\tTb11.02.0770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0004497\tGO_REF:0000011\tISM\tInterPro:IPR000733\tF\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0005783\tPMID:22964455\tIDA\t\tC\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20170727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0006725\tGO_REF:0000011\tISM\tInterPro:IPR000733\tP\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3280\tKIN13-5\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tKinesin-13 5, putative\tTb11.02.0790\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3280\tKIN13-5\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tKinesin-13 5, putative\tTb11.02.0790\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3280\tKIN13-5\t\tGO:0005623\tPMID:20808899\tIDA\t\tC\tKinesin-13 5, putative\tTb11.02.0790\tmRNA\ttaxon:185431\t20100909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3280\tKIN13-5\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tKinesin-13 5, putative\tTb11.02.0790\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3280\tKIN13-5\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tKinesin-13 5, putative\tTb11.02.0790\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3280\tKIN13-5\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tKinesin-13 5, putative\tTb11.02.0790\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3280\tKIN13-5\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tKinesin-13 5, putative\tTb11.02.0790\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3290\tp166\t\tGO:0000002\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 166\tTb11.02.0800\tmRNA\ttaxon:185431\t20180824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3290\tp166\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tTripartite attachment complex protein 166\tTb11.02.0800\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3290\tp166\t\tGO:0005743\tPMID:35709300\tIDA\t\tC\tTripartite attachment complex protein 166\tTb11.02.0800\tmRNA\ttaxon:185431\t20220831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3290\tp166\t\tGO:0008104\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 166\tTb11.02.0800\tmRNA\ttaxon:185431\t20180824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3290\tp166\t\tGO:0020023\tPMID:18059470\tIDA\t\tC\tTripartite attachment complex protein 166\tTb11.02.0800\tmRNA\ttaxon:185431\t20090818\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3290\tp166\t\tGO:0033955\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 166\tTb11.02.0800\tmRNA\ttaxon:185431\t20180824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.330\tMLP1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tMyosin-like protein 1\tTb11.03.0810|NUP110\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.330\tMLP1\t\tGO:0005643\tPMID:34407985\tIDA\t\tC\tMyosin-like protein 1\tTb11.03.0810|NUP110\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.330\tMLP1\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tMyosin-like protein 1\tTb11.03.0810|NUP110\tmRNA\ttaxon:185431\t20090622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.330\tMLP1\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tMyosin-like protein 1\tTb11.03.0810|NUP110\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.330\tMLP1\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tMyosin-like protein 1\tTb11.03.0810|NUP110\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.330\tMLP1\t\tGO:0044615\tPMID:26891179\tIDA\t\tC\tMyosin-like protein 1\tTb11.03.0810|NUP110\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3300\tSAS-4\t\tGO:0005515\tPMID:26504079\tIPI\tGeneDB:Tb927.10.840|GeneDB:Tb927.10.14320|GeneDB:Tb927.7.3330|GeneDB:Tb927.4.5340|GeneDB:Tb927.10.15750|GeneDB:Tb927.9.13810|GeneDB:Tb927.10.8940|GeneDB:Tb927.10.2860|GeneDB:Tb927.10.850|GeneDB:Tb927.10.3010|GeneDB:Tb927.7.7000|GeneDB:Tb927.10.8820|GeneDB:Tb927.10.1450|GeneDB:Tb927.5.4340|GeneDB:Tb927.11.15140|GeneDB:Tb927.7.2640|GeneDB:Tb927.8.6370|GeneDB:Tb927.7.3550|GeneDB:Tb927.11.2590|GeneDB:Tb927.3.1020|GeneDB:Tb927.8.6980\tF\tSpindle assembly abnormal 4\tTb11.02.0810|CENPJ\tmRNA\ttaxon:185431\t20151210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3300\tSAS-4\t\tGO:0007105\tPMID:26504079\tIMP\t\tP\tSpindle assembly abnormal 4\tTb11.02.0810|CENPJ\tmRNA\ttaxon:185431\t20151210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3300\tSAS-4\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tSpindle assembly abnormal 4\tTb11.02.0810|CENPJ\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3300\tSAS-4\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tSpindle assembly abnormal 4\tTb11.02.0810|CENPJ\tmRNA\ttaxon:185431\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3300\tSAS-4\t\tGO:0120119\tPMID:26504079\tIDA\t\tC\tSpindle assembly abnormal 4\tTb11.02.0810|CENPJ\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3310\tTb927.11.3310\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme, putative\tTb11.02.0815\tmRNA\ttaxon:185431\t20100715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3310\tTb927.11.3310\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme, putative\tTb11.02.0815\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3320\tTbGTR\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR006762\tF\tras-like small GTPase, putative\tTb11.02.0820\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3340\tRBP34\t\tGO:0000776\tPMID:31795916\tHDA\t\tC\tKKT-interacting protein 12\tKKIP12|Tb11.02.0840\tmRNA\ttaxon:185431\t20200313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3340\tRBP34\t\tGO:0003723\tGO_REF:0000024\tISS\t\tF\tKKT-interacting protein 12\tKKIP12|Tb11.02.0840\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3340\tRBP34\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tKKT-interacting protein 12\tKKIP12|Tb11.02.0840\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3340\tRBP34\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tKKT-interacting protein 12\tKKIP12|Tb11.02.0840\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3340\tRBP34\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tKKT-interacting protein 12\tKKIP12|Tb11.02.0840\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3340\tRBP34\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tKKT-interacting protein 12\tKKIP12|Tb11.02.0840\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3340\tRBP34\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tKKT-interacting protein 12\tKKIP12|Tb11.02.0840\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3350\tTb927.11.3350\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphospholipid-transporting ATPase 1-like protein, putative\tTb11.02.0850\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3350\tTb927.11.3350\t\tGO:0006812\tGO_REF:0000011\tISM\tInterPro:IPR001757\tP\tphospholipid-transporting ATPase 1-like protein, putative\tTb11.02.0850\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3350\tTb927.11.3350\t\tGO:0015662\tGO_REF:0000011\tISM\tInterPro:IPR001757\tF\tphospholipid-transporting ATPase 1-like protein, putative\tTb11.02.0850\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3350\tTb927.11.3350\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphospholipid-transporting ATPase 1-like protein, putative\tTb11.02.0850\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3360\tCMF22\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATPase family associated with various cellular activities (AAA), putative\tDRC11|Tb11.02.0860\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3360\tCMF22\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tATPase family associated with various cellular activities (AAA), putative\tDRC11|Tb11.02.0860\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3360\tCMF22\t\tGO:0048870\tPMID:30302029\tIMP\t\tP\tATPase family associated with various cellular activities (AAA), putative\tDRC11|Tb11.02.0860\tmRNA\ttaxon:185431\t20190110\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3360\tCMF22\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tATPase family associated with various cellular activities (AAA), putative\tDRC11|Tb11.02.0860\tmRNA\ttaxon:185431\t20090513\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3360\tCMF22\t\tGO:0060285\tPMID:31710293\tIMP\t\tP\tATPase family associated with various cellular activities (AAA), putative\tDRC11|Tb11.02.0860\tmRNA\ttaxon:185431\t20200521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3370\tTb927.11.3370\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein\tTb11.02.0865\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3380\tRanBP1\t\tGO:0005092\tGO_REF:0000011\tISM\tInterPro:IPR000156\tF\tRan-binding protein 1, putative\tTb11.02.0870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3380\tRanBP1\t\tGO:0005515\tPMID:25217630\tIPI\tGeneDB:Tb927.3.1120\tF\tRan-binding protein 1, putative\tTb11.02.0870\tmRNA\ttaxon:185431\t20170914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3380\tRanBP1\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P48820\tC\tRan-binding protein 1, putative\tTb11.02.0870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3380\tRanBP1\t\tGO:0005634\tPMID:25217630\tIDA\t\tC\tRan-binding protein 1, putative\tTb11.02.0870\tmRNA\ttaxon:185431\t20170914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3380\tRanBP1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRan-binding protein 1, putative\tTb11.02.0870\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3380\tRanBP1\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:P48820\tC\tRan-binding protein 1, putative\tTb11.02.0870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.340\tABP79\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tAUK3-binding protein 79 kDa\tTb11.03.0800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3410\tTb927.11.3410\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0900\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3430\tTb927.11.3430\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0920\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3440\tTb927.11.3440\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.0930\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3440\tTb927.11.3440\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.02.0930\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3440\tTb927.11.3440\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\thypothetical protein, conserved\tTb11.02.0930\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3470\tTb927.11.3470\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tendosomal integral membrane protein, putative\tTb11.02.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3480\tTb927.11.3480\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSin-like protein conserved region, putative\tTb11.02.0970\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3480\tTb927.11.3480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSin-like protein conserved region, putative\tTb11.02.0970\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3490\tTb927.11.3490\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\thypothetical protein, conserved\tTb11.02.0980\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.350\tRBP43\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.03.0790\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.350\tRBP43\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.03.0790\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.350\tRBP43\t\tGO:0016281\tPMID:24962368\tIPI\tGeneDB:Tb927.5.1490|GeneDB:Tb927.10.5020\tC\tRNA-binding protein, putative\tTb11.03.0790\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3510\tTb927.11.3510\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\thypothetical protein, conserved\tTb11.02.1000\tmRNA\ttaxon:185431\t20141201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3510\tTb927.11.3510\t\tGO:0120118\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1000\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3520\tTb927.11.3520\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tAcyl CoA binding protein, putative\tTb11.02.1010\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3530\tTb927.11.3530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.02.1020\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3530\tTb927.11.3530\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.02.1020\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3530\tTb927.11.3530\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.02.1020\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3530\tTb927.11.3530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.02.1020\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3530\tTb927.11.3530\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.02.1020\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3530\tTb927.11.3530\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb11.02.1020\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3540\tTb927.11.3540\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1030\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3550\tTb927.11.3550\t\tGO:0044376\tGO_REF:0000024\tISO\tUniProtKB:P47122\tP\tXPA-interacting protein, putative\tTb11.02.1040\tmRNA\ttaxon:185431\t20171121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3570\tTb927.11.3570\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001930\tP\taminopeptidase, putative\tTb11.02.1070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3570\tTb927.11.3570\t\tGO:0008235\tGO_REF:0000002\tISS\t\tF\taminopeptidase, putative\tTb11.02.1070\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3570\tTb927.11.3570\t\tGO:0008237\tGO_REF:0000011\tISM\tPfam:PF01433\tF\taminopeptidase, putative\tTb11.02.1070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3580\tTb927.11.3580\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tThiamin pyrophosphokinase, vitamin B1 binding domain containing protein, putative\tTb11.02.1080\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3590\tTb927.11.3590\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR002942\tF\t40S ribosomal protein S4, putative\tTb11.02.1085\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3590\tTb927.11.3590\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S4, putative\tTb11.02.1085\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3590\tTb927.11.3590\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000876\tF\t40S ribosomal protein S4, putative\tTb11.02.1085\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3590\tTb927.11.3590\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000876\tC\t40S ribosomal protein S4, putative\tTb11.02.1085\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3590\tTb927.11.3590\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000876\tP\t40S ribosomal protein S4, putative\tTb11.02.1085\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3590\tTb927.11.3590\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein S4, putative\tTb11.02.1085\tmRNA\ttaxon:185431\t20141201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.360\tTb927.11.360\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tATP-binding protein, putative\tTb11.03.0780\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3600\tTb927.11.3600\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR002942\tF\t40S ribosomal protein S4, putative\tTb11.02.1090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3600\tTb927.11.3600\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S4, putative\tTb11.02.1090\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3600\tTb927.11.3600\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000876\tF\t40S ribosomal protein S4, putative\tTb11.02.1090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3600\tTb927.11.3600\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S4, putative\tTb11.02.1090\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3600\tTb927.11.3600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S4, putative\tTb11.02.1090\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3600\tTb927.11.3600\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000876\tC\t40S ribosomal protein S4, putative\tTb11.02.1090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3600\tTb927.11.3600\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000876\tP\t40S ribosomal protein S4, putative\tTb11.02.1090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3610\tNT8.1\t\tGO:0009897\tPMID:12946846\tIDA\t\tC\tnucleobase/nucleoside transporter 8.1\tTb11.02.1100|NBT1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3610\tNT8.1\t\tGO:0015205\tPMID:12946846\tIDA\t\tF\tnucleobase/nucleoside transporter 8.1\tTb11.02.1100|NBT1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3610\tNT8.1\t\tGO:0015851\tPMID:12946846\tTAS\t\tP\tnucleobase/nucleoside transporter 8.1\tTb11.02.1100|NBT1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3620\tNT8.2\t\tGO:0009897\tPMID:12946846\tIDA\t\tC\tnucleobase/nucleoside transporter 8.2\tTb11.02.1105|NBT2\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3620\tNT8.2\t\tGO:0015205\tPMID:12946846\tIDA\t\tF\tnucleobase/nucleoside transporter 8.2\tTb11.02.1105|NBT2\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3620\tNT8.2\t\tGO:0015851\tPMID:12946846\tIGI\tUniProtKB:FUN26_YEAST\tP\tnucleobase/nucleoside transporter 8.2\tTb11.02.1105|NBT2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3620\tNT8.2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tnucleobase/nucleoside transporter 8.2\tTb11.02.1105|NBT2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3630\tNT8.3\t\tGO:0015205\tGO_REF:0000012\tISA\tUniProtKB:AAM64205.1\tF\tnucleobase/nucleoside transporter 8.3\tTb11.02.1106|NBT3\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3630\tNT8.3\t\tGO:0015851\tGO_REF:0000012\tISA\tUniProtKB:AAM64205.1\tP\tnucleobase/nucleoside transporter 8.3\tTb11.02.1106|NBT3\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3630\tNT8.3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tnucleobase/nucleoside transporter 8.3\tTb11.02.1106|NBT3\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3640\tMRPL27\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ribosomal protein L27\tTb11.02.1110\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3640\tMRPL27\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein L27\tTb11.02.1110\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3640\tMRPL27\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein L27\tTb11.02.1110\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3650\tTb927.11.3650\t\tGO:0004019\tGO_REF:0000011\tISM\tInterPro:IPR001114\tF\tadenylosuccinate synthetase, putative\tTb11.02.1120\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3650\tTb927.11.3650\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tadenylosuccinate synthetase, putative\tTb11.02.1120\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3650\tTb927.11.3650\t\tGO:0006164\tGO_REF:0000011\tISM\tInterPro:IPR001114\tP\tadenylosuccinate synthetase, putative\tTb11.02.1120\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3650\tTb927.11.3650\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tadenylosuccinate synthetase, putative\tTb11.02.1120\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3650\tTb927.11.3650\t\tGO:0020015\tPMID:18242729\tIDA\t\tC\tadenylosuccinate synthetase, putative\tTb11.02.1120\tmRNA\ttaxon:185431\t20160919\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3650\tTb927.11.3650\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tadenylosuccinate synthetase, putative\tTb11.02.1120\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3660\tTb927.11.3660\t\tGO:0003777\tGO_REF:0000012\tISA\tUniProtKB:Q15763\tF\tdynein light chain Tctex-type, putative\tTb11.02.1135\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3660\tTb927.11.3660\t\tGO:0005875\tGO_REF:0000012\tISA\tUniProtKB:DYLT_DROME\tC\tdynein light chain Tctex-type, putative\tTb11.02.1135\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3660\tTb927.11.3660\t\tGO:0007017\tGO_REF:0000012\tISA\tUniProtKB:P51807\tP\tdynein light chain Tctex-type, putative\tTb11.02.1135\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3670\tmt-SAF16\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 16\tTb11.02.1150\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3670\tmt-SAF16\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 16\tTb11.02.1150\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3680\tTb927.11.3680\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tcalmodulin, putative\tTb11.02.1160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3680\tTb927.11.3680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcalmodulin, putative\tTb11.02.1160\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3680\tTb927.11.3680\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tcalmodulin, putative\tTb11.02.1160\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.370\tRAP1\t\tGO:0000784\tPMID:19345190\tEXP\t\tC\trepressor activator protein 1\tTb11.03.0760\tmRNA\ttaxon:185431\t20090417\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.370\tRAP1\t\tGO:0005634\tPMID:19345190\tEXP\t\tC\trepressor activator protein 1\tTb11.03.0760\tmRNA\ttaxon:185431\t20090417\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.370\tRAP1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\trepressor activator protein 1\tTb11.03.0760\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.370\tRAP1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\trepressor activator protein 1\tTb11.03.0760\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.370\tRAP1\t\tGO:0070565\tPMID:29385523\tIPI\tGeneDB:Tb927.11.9870\tC\trepressor activator protein 1\tTb11.03.0760\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3700\tTb927.11.3700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUncharacterised ACR, YagE family COG1723, putative\tTb11.02.1180\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3700\tTb927.11.3700\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tUncharacterised ACR, YagE family COG1723, putative\tTb11.02.1180\tmRNA\ttaxon:185431\t20140127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3700\tTb927.11.3700\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tUncharacterised ACR, YagE family COG1723, putative\tTb11.02.1180\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3700\tTb927.11.3700\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tUncharacterised ACR, YagE family COG1723, putative\tTb11.02.1180\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3710\tTb927.11.3710\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1190\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3710\tTb927.11.3710\t\tGO:0005929\tPMID:28034897\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1190\tmRNA\ttaxon:185431\t20170201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3730\tLeuRS\t\tGO:0004823\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00395\tF\tleucyl-tRNA synthetase, putative\tTb11.02.1210\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3730\tLeuRS\t\tGO:0005524\tGO_REF:0000012\tISA\tUniProtKB:P26637\tF\tleucyl-tRNA synthetase, putative\tTb11.02.1210\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3730\tLeuRS\t\tGO:0006429\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00395\tP\tleucyl-tRNA synthetase, putative\tTb11.02.1210\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3740\tRPT2\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory ATPase subunit 2\tTb11.02.1220\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3740\tRPT2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory ATPase subunit 2\tTb11.02.1220\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3740\tRPT2\t\tGO:0005838\tPMID:11854272\tIDA\t\tC\tproteasome regulatory ATPase subunit 2\tTb11.02.1220\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3740\tRPT2\t\tGO:0006511\tPMID:11854272\tIMP\t\tP\tproteasome regulatory ATPase subunit 2\tTb11.02.1220\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3740\tRPT2\t\tGO:0016887\tPMID:11854272\tIGI\tUniProtKB:PRS4_YEAST\tF\tproteasome regulatory ATPase subunit 2\tTb11.02.1220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3750\tB5R\t\tGO:0004128\tGO_REF:0000012\tISA\tUniProtKB:P36060\tF\tNADH-cytochrome b5 reductase, putative\tTb11.02.1230\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3750\tB5R\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNADH-cytochrome b5 reductase, putative\tTb11.02.1230\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3750\tB5R\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADH-cytochrome b5 reductase, putative\tTb11.02.1230\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3760\tTb927.11.3760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.02.1240\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3760\tTb927.11.3760\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.02.1240\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3780\tTb927.11.3780\t\tGO:0004252\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tF\tserine peptidase, clan SB, family S8-like protein\tTb11.02.1280\tmRNA\ttaxon:185431\t20101007\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3780\tTb927.11.3780\t\tGO:0030154\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tserine peptidase, clan SB, family S8-like protein\tTb11.02.1280\tmRNA\ttaxon:185431\t20141202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3780\tTb927.11.3780\t\tGO:0045454\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tserine peptidase, clan SB, family S8-like protein\tTb11.02.1280\tmRNA\ttaxon:185431\t20141202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3790\tTb927.11.3790\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1290\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3790\tTb927.11.3790\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1290\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3790\tTb927.11.3790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1290\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.380\tb9d2\t\tGO:0035869\tGO_REF:0000002\tIDA\t\tC\tB9 domain-containing protein 2\tTb11.03.0750|mksr2|MKS1-R1\tmRNA\ttaxon:185431\t20161202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.380\tb9d2\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tB9 domain-containing protein 2\tTb11.03.0750|mksr2|MKS1-R1\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3820\tTb927.11.3820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1310|Tb927.11.3800\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3830\tTb927.11.3830\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1320\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3830\tTb927.11.3830\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1320\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3840\tTb927.11.3840\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1330\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3850\tTb927.11.3850\t\tGO:0009168\tGO_REF:0000011\tISM\tInterPro:IPR001365\tP\tAMP deaminase, putative\tTb11.02.1340\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3850\tTb927.11.3850\t\tGO:0019239\tGO_REF:0000011\tISM\tInterPro:IPR001365\tF\tAMP deaminase, putative\tTb11.02.1340\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3850\tTb927.11.3850\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tAMP deaminase, putative\tTb11.02.1340\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3860\tTb927.11.3860\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1350\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3860\tTb927.11.3860\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.1350\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3860\tTb927.11.3860\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1350\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3870\tTb927.11.3870\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkatanin, putative\tTb11.02.1370\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3870\tTb927.11.3870\t\tGO:0008352\tGO_REF:0000012\tISA\tUniProtKB:Q9NHF1_DROME\tC\tkatanin, putative\tTb11.02.1370\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3870\tTb927.11.3870\t\tGO:0016197\tGO_REF:0000012\tISA\tUniProtKB:P46467\tP\tkatanin, putative\tTb11.02.1370\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3870\tTb927.11.3870\t\tGO:0016887\tGO_REF:0000011\tISM\tPfam:PF00004\tF\tkatanin, putative\tTb11.02.1370\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3870\tTb927.11.3870\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tkatanin, putative\tTb11.02.1370\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3880\tTRYPARP\t\tGO:0005200\tGO_REF:0000011\tISM\tInterPro:IPR004000\tF\tactin, putative\tTb11.02.1380\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3880\tTRYPARP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tactin, putative\tTb11.02.1380\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3880\tTRYPARP\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tactin, putative\tTb11.02.1380\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3880\tTRYPARP\t\tGO:0007010\tGO_REF:0000024\tISS\tGeneDB:PF14_0124\tP\tactin, putative\tTb11.02.1380\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3880\tTRYPARP\t\tGO:0015629\tGO_REF:0000011\tISM\tInterPro:IPR004000\tC\tactin, putative\tTb11.02.1380\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3890\tTb927.11.3890\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR002905\tF\tN(2), N(2)-dimethylguanosine tRNA methyltransferase, putative\tTb11.02.1390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3890\tTb927.11.3890\t\tGO:0004809\tGO_REF:0000011\tISM\tInterPro:IPR002905\tF\tN(2), N(2)-dimethylguanosine tRNA methyltransferase, putative\tTb11.02.1390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3890\tTb927.11.3890\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tN(2), N(2)-dimethylguanosine tRNA methyltransferase, putative\tTb11.02.1390\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3890\tTb927.11.3890\t\tGO:0008033\tGO_REF:0000011\tISM\tInterPro:IPR002905\tP\tN(2), N(2)-dimethylguanosine tRNA methyltransferase, putative\tTb11.02.1390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3900\tTb927.11.3900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglycosyltransferase family-like protein, putative\tTb11.02.1400\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3900\tTb927.11.3900\t\tGO:0009103\tGO_REF:0000011\tISM\tInterPro:IPR002654\tP\tglycosyltransferase family-like protein, putative\tTb11.02.1400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3900\tTb927.11.3900\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tglycosyltransferase family-like protein, putative\tTb11.02.1400\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3900\tTb927.11.3900\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tglycosyltransferase family-like protein, putative\tTb11.02.1400\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3910\tTb927.11.3910\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1410\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3930\tTb927.11.3930\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1430\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3930\tTb927.11.3930\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1430\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3940\tTb927.11.3940\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1440\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3940\tTb927.11.3940\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.1440\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3950\tTb927.11.3950\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3970\tTb927.11.3970\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tTb11.02.1470\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3970\tTb927.11.3970\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1470\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3970\tTb927.11.3970\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1470\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3980\tTb927.11.3980\t\tGO:0004222\tGO_REF:0000002\tISS\t\tF\tmitochondrial processing peptidase alpha subunit, putative\tTb11.02.1480\tmRNA\ttaxon:185431\t20100721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3980\tTb927.11.3980\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tmitochondrial processing peptidase alpha subunit, putative\tTb11.02.1480\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3980\tTb927.11.3980\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial processing peptidase alpha subunit, putative\tTb11.02.1480\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3980\tTb927.11.3980\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tmitochondrial processing peptidase alpha subunit, putative\tTb11.02.1480\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3980\tTb927.11.3980\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001431\tP\tmitochondrial processing peptidase alpha subunit, putative\tTb11.02.1480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3990\tTb927.11.3990\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1490\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3990\tTb927.11.3990\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1490\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.400\tTb927.11.400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF1308), putative\tTb11.03.0730\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.400\tTb927.11.400\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF1308), putative\tTb11.03.0730\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4000\tTb927.11.4000\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1500\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4010\tTb927.11.4010\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1510\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4010\tTb927.11.4010\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1510\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4020\tTb927.11.4020\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tComplex1_LYR-like, putative\tTb11.02.1520\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4030\tTb927.11.4030\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1540\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4030\tTb927.11.4030\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1540\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4040\tTb927.11.4040\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1550\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4060\tTb927.11.4060\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\tTb11.02.1564\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.410\tmt-SAF34\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal SSU assembly factor 34\tTb11.03.0725\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4130\tTb927.11.4130\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tubiquitin-like protein, putative\tTb11.02.1600\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4140\tTb927.11.4140\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.1610\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4150\tTb927.11.4150\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1620\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4160\tTb927.11.4160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted C2 domain protein\tTb11.02.1630\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4170\tTb927.11.4170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid-specific dual specificity phosphatase, putative\tTb11.02.1640\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4180\tTb927.11.4180\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tPSP1 C-terminal conserved region, putative\tTb11.02.1660\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4180\tTb927.11.4180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPSP1 C-terminal conserved region, putative\tTb11.02.1660\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4190\tTb927.11.4190\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tMetallopeptidase family M24, putative\tTb11.02.1670\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4190\tTb927.11.4190\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tMetallopeptidase family M24, putative\tTb11.02.1670\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.420\tTb927.11.420\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tFcf2 pre-rRNA processing, putative\tTb11.03.0720\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.420\tTb927.11.420\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tFcf2 pre-rRNA processing, putative\tTb11.03.0720\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.420\tTb927.11.420\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tFcf2 pre-rRNA processing, putative\tTb11.03.0720\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4200\tTb927.11.4200\t\tGO:0005537\tGO_REF:0000011\tISM\tInterPro:IPR005052\tF\tmannose-specific lectin, putative\tTb11.02.1680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4200\tTb927.11.4200\t\tGO:0009306\tGO_REF:0000011\tISM\tInterPro:IPR005052\tP\tmannose-specific lectin, putative\tTb11.02.1680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4200\tTb927.11.4200\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tmannose-specific lectin, putative\tTb11.02.1680\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4200\tTb927.11.4200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmannose-specific lectin, putative\tTb11.02.1680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4210\tTb927.11.4210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tU-box domain containing protein, putative\tTb11.02.1690\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4210\tTb927.11.4210\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tU-box domain containing protein, putative\tTb11.02.1690\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4220\tPAT6\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 6, putative\tTb11.02.1710\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4220\tPAT6\t\tGO:0006897\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 6, putative\tTb11.02.1710\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4220\tPAT6\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 6, putative\tTb11.02.1710\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4220\tPAT6\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 6, putative\tTb11.02.1710\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4230\tTb927.11.4230\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1720\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4230\tTb927.11.4230\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1720\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4240\tTb927.11.4240\t\tGO:1990900\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1730\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4250\tTb927.11.4250\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1750\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4260\tMCUc\t\tGO:0005515\tPMID:32184243\tIPI\tGeneDB:Tb927.7.1470|GeneDB:Tb927.10.1570|GeneDB:Tb927.11.5280\tF\tmitochondrial calcium uniporter\tTb11.02.1760\tmRNA\ttaxon:185431\t20200626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4260\tMCUc\t\tGO:0005739\tPMID:32184243\tIPI\tGeneDB:Tb927.7.1470|GeneDB:Tb927.10.1570|GeneDB:Tb927.11.5280\tC\tmitochondrial calcium uniporter\tTb11.02.1760\tmRNA\ttaxon:185431\t20200626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4260\tMCUc\t\tGO:0005739\tPMID:30228243\tIDA\t\tC\tmitochondrial calcium uniporter\tTb11.02.1760\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4260\tMCUc\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial calcium uniporter\tTb11.02.1760\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4260\tMCUc\t\tGO:0006816\tPMID:30228243\tIMP\t\tP\tmitochondrial calcium uniporter\tTb11.02.1760\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4260\tMCUc\t\tGO:0015085\tPMID:30228243\tIMP\t\tF\tmitochondrial calcium uniporter\tTb11.02.1760\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4260\tMCUc\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmitochondrial calcium uniporter\tTb11.02.1760\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4260\tMCUc\t\tGO:1990246\tPMID:30228243\tIPI\tGeneDB:Tb927.11.1350\tC\tmitochondrial calcium uniporter\tTb11.02.1760\tmRNA\ttaxon:185431\t20190114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4280\tCAP156\t\tGO:0000281\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 156 kDa\tTb11.02.1810\tmRNA\ttaxon:185431\t20220423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4280\tCAP156\t\tGO:0005856\tPMID:35447115\tIDA\t\tC\tCytoskeleton-associated protein 156 kDa\tTb11.02.1810\tmRNA\ttaxon:185431\t20220423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4280\tCAP156\t\tGO:1990386\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 156 kDa\tTb11.02.1810\tmRNA\ttaxon:185431\t20220423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4290\tRPS12\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR004038\tF\t40S ribosomal protein S12\tTb11.02.1830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4290\tRPS12\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000530\tC\t40S ribosomal protein S12\tTb11.02.1830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4290\tRPS12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S12\tTb11.02.1830\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4290\tRPS12\t\tGO:0005840\tPMID:8433721\tIDA\t\tC\t40S ribosomal protein S12\tTb11.02.1830\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4290\tRPS12\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR004038\tP\t40S ribosomal protein S12\tTb11.02.1830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4290\tRPS12\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\t40S ribosomal protein S12\tTb11.02.1830\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4300\tRPL18\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000039\tF\t60S ribosomal protein L18, putative\tTb11.02.1840\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4300\tRPL18\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000039\tC\t60S ribosomal protein L18, putative\tTb11.02.1840\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4300\tRPL18\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L18, putative\tTb11.02.1840\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4300\tRPL18\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L18, putative\tTb11.02.1840\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4300\tRPL18\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000039\tC\t60S ribosomal protein L18, putative\tTb11.02.1840\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4320\tTb927.11.4320\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUncharacterized ACR, COG1678, putative\tTb11.02.1860\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4320\tTb927.11.4320\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tUncharacterized ACR, COG1678, putative\tTb11.02.1860\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4320\tTb927.11.4320\t\tGO:0005739\tPMID:23650088\tIDA\t\tC\tUncharacterized ACR, COG1678, putative\tTb11.02.1860\tmRNA\ttaxon:185431\t20200409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4330\tTb927.11.4330\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.1880\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4330\tTb927.11.4330\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1880\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4350\tTb927.11.4350\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.02.1900\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.440\tTb927.11.440\t\tGO:0003743\tGO_REF:0000011\tISM\tInterPro:IPR001950\tF\tconserved protein\tTb11.03.0700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.440\tTb927.11.440\t\tGO:0006413\tGO_REF:0000011\tISM\tInterPro:IPR001950\tP\tconserved protein\tTb11.03.0700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.440\tTb927.11.440\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tconserved protein\tTb11.03.0700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4400\tTb927.11.4400\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1950\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4420\tTb927.11.4420\t\tGO:0005929\tPMID:29781112\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1980\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4420\tTb927.11.4420\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.1980\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4430\tFR1\t\tGO:0005886\tGO_REF:0000012\tISA\tGB:AEG66929\tC\tferric reductase transmembrane protein, putative\tTb11.02.1990\tmRNA\ttaxon:185431\t20141203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4430\tFR1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tferric reductase transmembrane protein, putative\tTb11.02.1990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4430\tFR1\t\tGO:0016491\tGO_REF:0000011\tISM\tInterPro:IPR002916\tF\tferric reductase transmembrane protein, putative\tTb11.02.1990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4430\tFR1\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tferric reductase transmembrane protein, putative\tTb11.02.1990\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4440\tTb927.11.4440\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein\tTb11.02.2020\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4450\tALBA2\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:LinJ.13.0270\tC\tALBA-Domain Protein\tTb11.02.2030\tmRNA\ttaxon:185431\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4450\tALBA2\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LinJ.13.0270\tC\tALBA-Domain Protein\tTb11.02.2030\tmRNA\ttaxon:185431\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4450\tALBA2\t\tGO:0005737\tPMID:21811616\tIDA\t\tC\tALBA-Domain Protein\tTb11.02.2030\tmRNA\ttaxon:185431\t20110811\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4450\tALBA2\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LinJ.13.0270\tC\tALBA-Domain Protein\tTb11.02.2030\tmRNA\ttaxon:185431\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4450\tALBA2\t\tGO:0010494\tPMID:21811616\tIDA\t\tC\tALBA-Domain Protein\tTb11.02.2030\tmRNA\ttaxon:185431\t20110811\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4450\tALBA2\t\tGO:0034605\tGO_REF:0000024\tISO\tGeneDB:LinJ.13.0270\tP\tALBA-Domain Protein\tTb11.02.2030\tmRNA\ttaxon:185431\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4450\tALBA2\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tALBA-Domain Protein\tTb11.02.2030\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4460\tALBA1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tALBA-Domain Protein\tTb11.02.2040\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4460\tALBA1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tALBA-Domain Protein\tTb11.02.2040\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4460\tALBA1\t\tGO:0005737\tPMID:21811616\tIDA\t\tC\tALBA-Domain Protein\tTb11.02.2040\tmRNA\ttaxon:185431\t20110811\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4460\tALBA1\t\tGO:0010494\tPMID:21811616\tIDA\t\tC\tALBA-Domain Protein\tTb11.02.2040\tmRNA\ttaxon:185431\t20110811\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4470\tTb927.11.4470\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tULK family serine/threonine-protein kinase, putative\tTb11.02.2050\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4470\tTb927.11.4470\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tULK family serine/threonine-protein kinase, putative\tTb11.02.2050\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4480\tRSP4/6\t\tGO:0001534\tGO_REF:0000012\tISS\tUniProtKB:Q01656\tC\tFlagellar radial spoke protein 4/6\tTb11.02.2060\tmRNA\ttaxon:185431\t20160316\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4480\tRSP4/6\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.13.0430\tC\tFlagellar radial spoke protein 4/6\tTb11.02.2060\tmRNA\ttaxon:185431\t20160316\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4480\tRSP4/6\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tFlagellar radial spoke protein 4/6\tTb11.02.2060\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4480\tRSP4/6\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:LmxM.13.0430\tC\tFlagellar radial spoke protein 4/6\tTb11.02.2060\tmRNA\ttaxon:185431\t20160317\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4480\tRSP4/6\t\tGO:0097730\tGO_REF:0000024\tISO\tGeneDB:LmxM.13.0430\tC\tFlagellar radial spoke protein 4/6\tTb11.02.2060\tmRNA\ttaxon:185431\t20160317\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR000873\tF\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0005739\tPMID:22158713\tIDA\t\tC\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15810|GeneDB:Tb927.11.15440\tC\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20141203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR000873\tP\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.450\tACS2\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0690\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.450\tACS2\t\tGO:0097542\tPMID:30550896\tHDA\t\tC\thypothetical protein, conserved\tTb11.03.0690\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4500\tTb927.11.4500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2080\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4510\tTb927.11.4510\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSister chromatid cohesion C-terminus, putative\tTb11.02.2090\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4520\tTb927.11.4520\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2100\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4520\tTb927.11.4520\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2100\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4520\tTb927.11.4520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2100\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4530\tARD1\t\tGO:0003824\tPMID:11163439\tTAS\t\tF\tN-acetyltransferase subunit ARD1\tTb11.02.2110\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4530\tARD1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tN-acetyltransferase subunit ARD1\tTb11.02.2110\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4530\tARD1\t\tGO:0006474\tPMID:11163439\tTAS\t\tP\tN-acetyltransferase subunit ARD1\tTb11.02.2110\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4530\tARD1\t\tGO:0008080\tGO_REF:0000011\tISM\tInterPro:IPR000182\tF\tN-acetyltransferase subunit ARD1\tTb11.02.2110\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4530\tARD1\t\tGO:0016049\tPMID:11163439\tIMP\t\tP\tN-acetyltransferase subunit ARD1\tTb11.02.2110\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4540\tNUP48\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP48\tTb11.02.2120\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4540\tNUP48\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP48\tTb11.02.2120\tmRNA\ttaxon:185431\t20090616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4540\tNUP48\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP48\tTb11.02.2120\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4550\tTb927.11.4550\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4200), putative\tTb11.02.2130\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4550\tTb927.11.4550\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4200), putative\tTb11.02.2130\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4550\tTb927.11.4550\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tDomain of unknown function (DUF4200), putative\tTb11.02.2130\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4550\tTb927.11.4550\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4200), putative\tTb11.02.2130\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4550\tTb927.11.4550\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4200), putative\tTb11.02.2130\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4570\tRAB5B\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tRas-related protein Rab5B\tTb11.02.2160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4570\tRAB5B\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRas-related protein Rab5B\tTb11.02.2160\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4570\tRAB5B\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tRas-related protein Rab5B\tTb11.02.2160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.460\tTb927.11.460\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpredicted WD40 repeat protein\tTb11.03.0680\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.460\tTb927.11.460\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tpredicted WD40 repeat protein\tTb11.03.0680\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0005929\tPMID:21685506\tIDA\t\tC\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20150420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0005952\tPMID:30926779\tIPI\tGeneDB:Tb927.9.11100\tC\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20190716\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0005952\tGO_REF:0000011\tISM\tInterPro:IPR002373\tC\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR002373\tP\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0008603\tGO_REF:0000011\tISM\tInterPro:IPR000595\tF\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0035556\tGO_REF:0000012\tISA\tUniProtKB:P10644\tP\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0060294\tPMID:21685506\tIMP\t\tP\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20150420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4620\tTb927.11.4620\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2220\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4620\tTb927.11.4620\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2220\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4620\tTb927.11.4620\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2220\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4640\tTb927.11.4640\t\tGO:0004198\tGO_REF:0000011\tISM\tInterPro:IPR001300\tF\tcalpain-like protein, putative\tTb11.02.2240\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4640\tTb927.11.4640\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001300\tP\tcalpain-like protein, putative\tTb11.02.2240\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4650\tMRPL52\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein L52\tTb11.02.2250|KRIPP13\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4650\tMRPL52\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein L52\tTb11.02.2250|KRIPP13\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4650\tMRPL52\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein L52\tTb11.02.2250|KRIPP13\tmRNA\ttaxon:185431\t20170531\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4660\tKIN13-2\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tKinesin-13 2\tTb11.02.2260|Kif13-2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4660\tKIN13-2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tKinesin-13 2\tTb11.02.2260|Kif13-2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4660\tKIN13-2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tKinesin-13 2\tTb11.02.2260|Kif13-2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4660\tKIN13-2\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tKinesin-13 2\tTb11.02.2260|Kif13-2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4660\tKIN13-2\t\tGO:0005929\tPMID:20728476\tIDA\t\tC\tKinesin-13 2\tTb11.02.2260|Kif13-2\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4660\tKIN13-2\t\tGO:0060271\tPMID:20728476\tIMP\t\tP\tKinesin-13 2\tTb11.02.2260|Kif13-2\tmRNA\ttaxon:185431\t20141202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4660\tKIN13-2\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\tKinesin-13 2\tTb11.02.2260|Kif13-2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4670\tTb927.11.4670\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.02.2270\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4670\tTb927.11.4670\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2270\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4680\tTb927.11.4680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSURF1 family, putative\tTb11.02.2280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4680\tTb927.11.4680\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSURF1 family, putative\tTb11.02.2280\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4690\tPOLIB\t\tGO:0003887\tGO_REF:0000011\tISM\tInterPro:IPR001098\tF\tmitochondrial DNA polymerase I protein B\tTb11.02.2300\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4690\tPOLIB\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial DNA polymerase I protein B\tTb11.02.2300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4690\tPOLIB\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tmitochondrial DNA polymerase I protein B\tTb11.02.2300\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4690\tPOLIB\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial DNA polymerase I protein B\tTb11.02.2300\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4690\tPOLIB\t\tGO:0006260\tGO_REF:0000011\tISM\tInterPro:IPR001098\tP\tmitochondrial DNA polymerase I protein B\tTb11.02.2300\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4690\tPOLIB\t\tGO:0006264\tPMID:20132449\tIMP\t\tP\tmitochondrial DNA polymerase I protein B\tTb11.02.2300\tmRNA\ttaxon:185431\t20100406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4690\tPOLIB\t\tGO:0016797\tGO_REF:0000011\tISM\tInterPro:IPR006055\tF\tmitochondrial DNA polymerase I protein B\tTb11.02.2300\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.470\tBRF1\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000812\tC\tTFIIB-related factor BRF1\tTb11.03.0670\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.470\tBRF1\t\tGO:0005634\tPMID:26337955\tIDA\t\tC\tTFIIB-related factor BRF1\tTb11.03.0670\tmRNA\ttaxon:185431\t20170428\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.470\tBRF1\t\tGO:0005667\tGO_REF:0000011\tISM\tInterPro:IPR000812\tC\tTFIIB-related factor BRF1\tTb11.03.0670\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.470\tBRF1\t\tGO:0006351\tGO_REF:0000011\tISM\tInterPro:IPR000812\tP\tTFIIB-related factor BRF1\tTb11.03.0670\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.470\tBRF1\t\tGO:0042791\tPMID:26337955\tIMP\t\tP\tTFIIB-related factor BRF1\tTb11.03.0670\tmRNA\ttaxon:185431\t20170510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.470\tBRF1\t\tGO:0042796\tPMID:26337955\tIMP\t\tP\tTFIIB-related factor BRF1\tTb11.03.0670\tmRNA\ttaxon:185431\t20170510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.470\tBRF1\t\tGO:0042797\tPMID:26337955\tIMP\t\tP\tTFIIB-related factor BRF1\tTb11.03.0670\tmRNA\ttaxon:185431\t20170510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4700\tTb927.11.4700\t\tGO:0004033\tGO_REF:0000011\tISM\tPfam:PF00248\tF\tprostaglandin f synthase\tTb11.02.2310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4700\tTb927.11.4700\t\tGO:0019571\tPMID:17320480|PMID:19497128\tTAS\t\tP\tprostaglandin f synthase\tTb11.02.2310\tmRNA\ttaxon:185431\t20091019\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4700\tTb927.11.4700\t\tGO:0045290\tPMID:17320480|PMID:19497128\tTAS\t\tF\tprostaglandin f synthase\tTb11.02.2310\tmRNA\ttaxon:185431\t20091019\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4710\tTb927.11.4710\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2320\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4710\tTb927.11.4710\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2320\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4720\tTb927.11.4720\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2330\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4730\tTb927.11.4730\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2340\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4730\tTb927.11.4730\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2340\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4740\tPFC12\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tparaflagellar rod component, putative\tTb11.02.2350\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4750\tTb927.11.4750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.02.2360\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4750\tTb927.11.4750\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.02.2360\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4750\tTb927.11.4750\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.02.2360\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4780\tPDHK\t\tGO:0004740\tGO_REF:0000012\tISA\tUniProtKB:O54937\tF\tpyruvate dehydrogenase (lipoamide) kinase, putative\tTb11.02.2390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4780\tPDHK\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpyruvate dehydrogenase (lipoamide) kinase, putative\tTb11.02.2390\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4780\tPDHK\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tpyruvate dehydrogenase (lipoamide) kinase, putative\tTb11.02.2390\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4780\tPDHK\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tpyruvate dehydrogenase (lipoamide) kinase, putative\tTb11.02.2390\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4780\tPDHK\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tpyruvate dehydrogenase (lipoamide) kinase, putative\tTb11.02.2390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.480\tTb927.11.480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsmall GTP-binding protein domain containing protein, putative\tTb11.03.0660\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.480\tTb927.11.480\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tsmall GTP-binding protein domain containing protein, putative\tTb11.03.0660\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4800\tTb927.11.4800\t\tGO:0000331\tPMID:21437209\tISO\tGeneDB:TcCLB.503449.30\tC\tclathrin coat assembly protein, putative\tTb11.02.2410\tmRNA\ttaxon:185431\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4800\tTb927.11.4800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tclathrin coat assembly protein, putative\tTb11.02.2410\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4800\tTb927.11.4800\t\tGO:0006898\tGO_REF:0000012\tISA\tUniProtKB:Q05140\tP\tclathrin coat assembly protein, putative\tTb11.02.2410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4800\tTb927.11.4800\t\tGO:0030132\tGO_REF:0000012\tISA\tUniProtKB:Q05140\tC\tclathrin coat assembly protein, putative\tTb11.02.2410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4800\tTb927.11.4800\t\tGO:0030276\tGO_REF:0000012\tISA\tUniProtKB:Q05140\tF\tclathrin coat assembly protein, putative\tTb11.02.2410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4810\tTb927.11.4810\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.2420\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4820\tTb927.11.4820\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01038\tF\t60S ribosomal protein L17, putative\tTb11.02.2430\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4820\tTb927.11.4820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L17, putative\tTb11.02.2430\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4820\tTb927.11.4820\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01038\tP\t60S ribosomal protein L17, putative\tTb11.02.2430\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4840\tTb927.11.4840\t\tGO:1990900\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2450\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4850\tTb927.11.4850\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.2460\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4850\tTb927.11.4850\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2460\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4850\tTb927.11.4850\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.2460\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4860\tTb927.11.4860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRing finger domain containing protein, putative\tTb11.02.2470\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4860\tTb927.11.4860\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tRing finger domain containing protein, putative\tTb11.02.2470\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4870\tTb927.11.4870\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2480\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4870\tTb927.11.4870\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.2480\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4870\tTb927.11.4870\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.02.2480\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4870\tTb927.11.4870\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2480\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4880\tTb927.11.4880\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCalmodulin-binding, putative\tTb11.02.2490\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4880\tTb927.11.4880\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tCalmodulin-binding, putative\tTb11.02.2490\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4890\tMT48\t\tGO:0005654\tPMID:16757738\tIDA\t\tC\tpoly A polymerase regulatory subunit, putative\tMT417|Tb11.02.2500\tmRNA\ttaxon:185431\t20210129\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4890\tMT48\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tpoly A polymerase regulatory subunit, putative\tMT417|Tb11.02.2500\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4900\tTb927.11.4900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tguanine nucleotide-binding beta subunit-like protein\tTb11.02.2510\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4910\tTb927.11.4910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted ankyrin repeat family protein\tTb11.02.2520\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4930\tTb927.11.4930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPhosducin, putative\tTb11.02.2540\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4930\tTb927.11.4930\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tPhosducin, putative\tTb11.02.2540\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4940\tTb927.11.4940\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003959\tF\tAAA ATPase, putative\tTb11.02.2550\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4940\tTb927.11.4940\t\tGO:0042144\tGO_REF:0000012\tISA\tUniProtKB:Q9ZPR1\tP\tAAA ATPase, putative\tTb11.02.2550\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4950\tTb927.11.4950\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2560\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4950\tTb927.11.4950\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2560\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4960\tTFIIS1\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001222\tF\ttranscription elongation factor s-II, putative\tTb11.02.2600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4960\tTFIIS1\t\tGO:0003700\tGO_REF:0000011\tISM\tInterPro:IPR001222\tF\ttranscription elongation factor s-II, putative\tTb11.02.2600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4960\tTFIIS1\t\tGO:0006354\tGO_REF:0000011\tISM\tInterPro:IPR001222\tP\ttranscription elongation factor s-II, putative\tTb11.02.2600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4960\tTFIIS1\t\tGO:0006355\tGO_REF:0000011\tISM\tInterPro:IPR001222\tP\ttranscription elongation factor s-II, putative\tTb11.02.2600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4970\tCAF1C\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tChromatin assembly factor 1 subunit C\tTb11.02.2610\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4980\tTb927.11.4980\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.2620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4980\tTb927.11.4980\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.2620\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4980\tTb927.11.4980\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.2620\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4980\tTb927.11.4980\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.2620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4980\tTb927.11.4980\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.2620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4990\tTb927.11.4990\t\tGO:0004722\tGO_REF:0000011\tISM\tPfam:PF00149\tF\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.02.2630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4990\tTb927.11.4990\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.02.2630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4990\tTb927.11.4990\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:IPR006186\tF\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.02.2630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.500\tUBP1\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, UBP1\tTb11.03.0620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.500\tUBP1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tRNA-binding protein, UBP1\tTb11.03.0620\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.500\tUBP1\t\tGO:0005634\tPMID:17873084\tIDA\t\tC\tRNA-binding protein, UBP1\tTb11.03.0620\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.500\tUBP1\t\tGO:0005737\tPMID:17873084\tIDA\t\tC\tRNA-binding protein, UBP1\tTb11.03.0620\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.500\tUBP1\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, UBP1\tTb11.03.0620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.500\tUBP1\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, UBP1\tTb11.03.0620\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5000\tDNAI1\t\tGO:0003774\tGO_REF:0000012\tISA\tUniProtKB:Q16959\tF\tDynein intermediate chain 1, axonemal\tTb11.02.2640|IC78\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5000\tDNAI1\t\tGO:0005856\tGO_REF:0000012\tISA\tUniProtKB:Q16959\tC\tDynein intermediate chain 1, axonemal\tTb11.02.2640|IC78\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5000\tDNAI1\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tDynein intermediate chain 1, axonemal\tTb11.02.2640|IC78\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5000\tDNAI1\t\tGO:0007018\tGO_REF:0000012\tISA\tUniProtKB:Q13409\tP\tDynein intermediate chain 1, axonemal\tTb11.02.2640|IC78\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5000\tDNAI1\t\tGO:0030286\tGO_REF:0000012\tISA\tUniProtKB:Q9UI46\tC\tDynein intermediate chain 1, axonemal\tTb11.02.2640|IC78\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5000\tDNAI1\t\tGO:0043056\tPMID:16882690\tIMP\t\tP\tDynein intermediate chain 1, axonemal\tTb11.02.2640|IC78\tmRNA\ttaxon:185431\t20150731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5000\tDNAI1\t\tGO:0060294\tPMID:16882690\tIMP\t\tP\tDynein intermediate chain 1, axonemal\tTb11.02.2640|IC78\tmRNA\ttaxon:185431\t20150731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5010\tTb927.11.5010\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTFIIF-stimulated CTD phosphatase, putative\tTb11.02.2650\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5020\tTb927.11.5020\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2670\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5030\tTb927.11.5030\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.2680\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5030\tTb927.11.5030\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2680\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5040\tTb927.11.5040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\tTb11.02.2690\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5050\tFHm\t\tGO:0004333\tPMID:16857679\tIDA\t\tF\tfumarate hydratase, class I\tTb11.02.2700|fumarase\tmRNA\ttaxon:185431\t20090414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5050\tFHm\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tfumarate hydratase, class I\tTb11.02.2700|fumarase\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5050\tFHm\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\tfumarate hydratase, class I\tTb11.02.2700|fumarase\tmRNA\ttaxon:185431\t20170811\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5050\tFHm\t\tGO:0005739\tPMID:16857679\tIDA\t\tC\tfumarate hydratase, class I\tTb11.02.2700|fumarase\tmRNA\ttaxon:185431\t20090414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5050\tFHm\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tfumarate hydratase, class I\tTb11.02.2700|fumarase\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5050\tFHm\t\tGO:0006106\tGO_REF:0000012\tISA\tUniProtKB:P00923\tP\tfumarate hydratase, class I\tTb11.02.2700|fumarase\tmRNA\ttaxon:185431\t20090414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5060\tmt-SAF1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 1\tTb11.02.2710\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5060\tmt-SAF1\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitoribosomal SSU assembly factor 1\tTb11.02.2710\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5070\tGPI13\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGPI ethanolamine phosphate transferase 3, putative\tTb11.02.2720\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5070\tGPI13\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tGPI ethanolamine phosphate transferase 3, putative\tTb11.02.2720\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5070\tGPI13\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tGPI ethanolamine phosphate transferase 3, putative\tTb11.02.2720\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0004021\tGO_REF:0000012\tISA\tUniProtKB:Q9S7E9\tF\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0005739\tPMID:11443076\tIDA\t\tC\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20140127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0009058\tGO_REF:0000011\tISM\tInterPro:IPR004839\tP\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0019509\tPMID:11443076\tIDA\t\tP\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.510\tUBP2\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein, UBP2\tTb11.03.0580\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.510\tUBP2\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tRNA-binding protein, UBP2\tTb11.03.0580\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.510\tUBP2\t\tGO:0003729\tPMID:18611951\tIPI\tGeneDB:Tb927.1.710\tF\tRNA-binding protein, UBP2\tTb11.03.0580\tmRNA\ttaxon:185431\t20130821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.510\tUBP2\t\tGO:0005634\tPMID:17873084\tIDA\t\tC\tRNA-binding protein, UBP2\tTb11.03.0580\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.510\tUBP2\t\tGO:0005737\tPMID:17873084\tIDA\t\tC\tRNA-binding protein, UBP2\tTb11.03.0580\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.510\tUBP2\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, UBP2\tTb11.03.0580\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5110\tTb927.11.5110\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2770\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5110\tTb927.11.5110\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2770\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5110\tTb927.11.5110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2770\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5110\tTb927.11.5110\t\tGO:0005819\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2770\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5120\tSET11\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tSET domain protein 11\tTb11.02.2780\tmRNA\ttaxon:185431\t20220204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5130\tTb927.11.5130\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2790\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5140\tTb927.11.5140\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tcysteine peptidase, Clan CA, family C12, putative\tTb11.02.2800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5140\tTb927.11.5140\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tcysteine peptidase, Clan CA, family C12, putative\tTb11.02.2800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5140\tTb927.11.5140\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:GO:0004221\tC\tcysteine peptidase, Clan CA, family C12, putative\tTb11.02.2800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5140\tTb927.11.5140\t\tGO:0005838\tGO_REF:0000011\tISM\tInterPro:Q9XSJ0\tC\tcysteine peptidase, Clan CA, family C12, putative\tTb11.02.2800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5140\tTb927.11.5140\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001578\tP\tcysteine peptidase, Clan CA, family C12, putative\tTb11.02.2800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5150\tTb927.11.5150\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\thypothetical protein, conserved\tTb11.02.2810\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5150\tTb927.11.5150\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2810\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5160\tTb927.11.5160\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2820\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5170\tTb927.11.5170\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR000594\tF\tubiquitin activating enzyme, putative\tTb11.02.2830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5170\tTb927.11.5170\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tubiquitin activating enzyme, putative\tTb11.02.2830\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5170\tTb927.11.5170\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tubiquitin activating enzyme, putative\tTb11.02.2830\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5180\tTb927.11.5180\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2840\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5190\tTb927.11.5190\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\tTb11.02.2850\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.520\tTb927.11.520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0570\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5200\tTb927.11.5200\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2860\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5200\tTb927.11.5200\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2860\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5200\tTb927.11.5200\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2860\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5210\tTb927.11.5210\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5220\tTb927.11.5220\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\tTb11.02.2880\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5220\tTb927.11.5220\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\tTb11.02.2880\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5220\tTb927.11.5220\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\tTb11.02.2880\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5230\tTb927.11.5230\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2890\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5230\tTb927.11.5230\t\tGO:0005634\tPMID:28034897\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2890\tmRNA\ttaxon:185431\t20170201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5230\tTb927.11.5230\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2890\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5240\tTb927.11.5240\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMethyltransferase TRM13, putative\tTb11.02.2910\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5250\tTb927.11.5250\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.2920\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5260\tTb927.11.5260\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000330\tF\tSNF2 family protein\tTb11.02.2930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5260\tTb927.11.5260\t\tGO:0005524\tGO_REF:0000011\tISM\t\tF\tSNF2 family protein\tTb11.02.2930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5260\tTb927.11.5260\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tSNF2 family protein\tTb11.02.2930\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5260\tTb927.11.5260\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSNF2 family protein\tTb11.02.2930\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5260\tTb927.11.5260\t\tGO:0006338\tGO_REF:0000012\tISA\tUniProtKB:AAF24984.1\tP\tSNF2 family protein\tTb11.02.2930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5270\tTb927.11.5270\t\tGO:0004197\tGO_REF:0000011\tISM\tInterPro:IPR001394\tF\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.02.2940\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5270\tTb927.11.5270\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.02.2940\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5270\tTb927.11.5270\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.02.2940\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5270\tTb927.11.5270\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001394\tP\tubiquitin carboxyl-terminal hydrolase, putative\tTb11.02.2940\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0000276\tPMID:19436713\tIDA\t\tC\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20170525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0005515\tPMID:32184243\tIPI\tGeneDB:Tb927.11.1350\tF\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20200624\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0005739\tPMID:32184243\tIPI\tGeneDB:Tb927.11.1350\tC\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20200624\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0005743\tPMID:15223320\tNAS\t\tC\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0005753\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tC\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0015992\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tP\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0046961\tGO_REF:0000011\tISM\tInterPro:IPR002379\tF\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001993\tC\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.530\tRBP3\t\tGO:0003723\tPMID:18840477\tIMP\t\tF\tRNA-binding protein, putative\tTb11.03.0550\tmRNA\ttaxon:185431\t20090828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.530\tRBP3\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tRNA-binding protein, putative\tTb11.03.0550\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.530\tRBP3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.03.0550\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.530\tRBP3\t\tGO:0005737\tPMID:18840477\tIDA\t\tC\tRNA-binding protein, putative\tTb11.03.0550\tmRNA\ttaxon:185431\t20090828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.530\tRBP3\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.03.0550\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.530\tRBP3\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.03.0550\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\t\tGO:0003774\tGO_REF:0000024\tISS\t\tF\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\tNOT\tGO:0005634\tPMID:20808899\tIDA\t\tC\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\t\tGO:0005737\tPMID:20808899\tIDA\t\tC\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\tNOT\tGO:0005929\tPMID:20808899\tIDA\t\tC\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5310\tTb927.11.5310\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPPPDE putative peptidase domain containing protein, putative\tTb11.02.2980\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5340\tTb927.11.5340\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tCell division protein kinase, putative\tTb11.02.3010\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5340\tTb927.11.5340\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCell division protein kinase, putative\tTb11.02.3010\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5340\tTb927.11.5340\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCell division protein kinase, putative\tTb11.02.3010\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5340\tTb927.11.5340\t\tGO:1902412\tPMID:24453978\tIMP\t\tP\tCell division protein kinase, putative\tTb11.02.3010\tmRNA\ttaxon:185431\t20150216\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5350\tHMIT\t\tGO:0005794\tPMID:25888554\tIDA\t\tC\tmyo-inositol/proton symporter (MIT)\tTb11.02.3020\tmRNA\ttaxon:185431\t20170713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5350\tHMIT\t\tGO:0008643\tGO_REF:0000012\tISA\tUniProtKB:Q01440\tP\tmyo-inositol/proton symporter (MIT)\tTb11.02.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5350\tHMIT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmyo-inositol/proton symporter (MIT)\tTb11.02.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5350\tHMIT\t\tGO:0051119\tGO_REF:0000012\tISA\tUniProtKB:Q01440\tF\tmyo-inositol/proton symporter (MIT)\tTb11.02.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5360\tTb927.11.5360\t\tGO:0004033\tGO_REF:0000012\tISA\tUniProtKB:P14065\tF\taldo/keto reductase, putative\tTb11.02.3040\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5360\tTb927.11.5360\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P14065\tC\taldo/keto reductase, putative\tTb11.02.3040\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5360\tTb927.11.5360\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:P14065\tC\taldo/keto reductase, putative\tTb11.02.3040\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5360\tTb927.11.5360\t\tGO:0008152\tGO_REF:0000012\tISA\tUniProtKB:P14065\tP\taldo/keto reductase, putative\tTb11.02.3040\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5380\tTb927.11.5380\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tProtein of unknown function (DUF523), putative\tTb11.02.3060\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5390\tTIM8-13\t\tGO:0005515\tPMID:29925672\tIPI\tGeneDB:Tb927.11.13290\tF\tmitochondrial import inner membrane translocase subunit, putative\tTb11.02.3065\tmRNA\ttaxon:185431\t20180807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5390\tTIM8-13\t\tGO:0005739\tPMID:29925672\tIDA\t\tC\tmitochondrial import inner membrane translocase subunit, putative\tTb11.02.3065\tmRNA\ttaxon:185431\t20180807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5390\tTIM8-13\t\tGO:0005744\tPMID:27991487\tIPI\tGeneDB:Tb927.11.13290\tC\tmitochondrial import inner membrane translocase subunit, putative\tTb11.02.3065\tmRNA\ttaxon:185431\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5390\tTIM8-13\t\tGO:0005758\tPMID:29925672\tIDA\t\tC\tmitochondrial import inner membrane translocase subunit, putative\tTb11.02.3065\tmRNA\ttaxon:185431\t20180807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5390\tTIM8-13\t\tGO:0042719\tPMID:29925672\tIPI\tGeneDB:Tb927.7.2200\tC\tmitochondrial import inner membrane translocase subunit, putative\tTb11.02.3065\tmRNA\ttaxon:185431\t20180807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0005524\tGO_REF:0000011\tISM\tPfam:PF00005\tF\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0005739\tPMID:25503798\tIDA\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20150409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20150409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0006810\tGO_REF:0000024\tISS\t\tP\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0042626\tGO_REF:0000024\tISS\t\tF\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0043190\tGO_REF:0000024\tISS\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0005524\tGO_REF:0000011\tISM\tPfam:PF00005\tF\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0005739\tPMID:25503798\tIDA\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20150409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20150409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0006810\tGO_REF:0000024\tISS\tUniProtKB:Q9JI39|Pfam:PF00005\tP\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0042626\tGO_REF:0000024\tISS\tUniProtKB:Q9JI39|Pfam:PF00005\tF\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0043190\tGO_REF:0000024\tISS\tUniProtKB:Q9JI39|Pfam:PF00005\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5400\tSRP54\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:P61011\tF\tsignal recognition particle 54 kDa\tTb11.02.3070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5400\tSRP54\t\tGO:0003924\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01425\tF\tsignal recognition particle 54 kDa\tTb11.02.3070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5400\tSRP54\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR000897\tF\tsignal recognition particle 54 kDa\tTb11.02.3070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5400\tSRP54\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tsignal recognition particle 54 kDa\tTb11.02.3070\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5400\tSRP54\t\tGO:0005786\tGO_REF:0000011\tISM\tInterPro:IPR000897\tC\tsignal recognition particle 54 kDa\tTb11.02.3070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5400\tSRP54\t\tGO:0006605\tGO_REF:0000011\tISM\tInterPro:IPR004125\tP\tsignal recognition particle 54 kDa\tTb11.02.3070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5410\tTb927.11.5410\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.02.3080\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5410\tTb927.11.5410\t\tGO:0120119\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.02.3080\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5420\tTb927.11.5420\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3100\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5430\tTb927.11.5430\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000330\tF\tDNA repair and recombination protein RAD54, putative\tTb11.02.3110\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5430\tTb927.11.5430\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001650\tF\tDNA repair and recombination protein RAD54, putative\tTb11.02.3110\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5430\tTb927.11.5430\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA repair and recombination protein RAD54, putative\tTb11.02.3110\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5430\tTb927.11.5430\t\tGO:0006338\tGO_REF:0000012\tISA\tUniProtKB:P32863\tP\tDNA repair and recombination protein RAD54, putative\tTb11.02.3110\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5430\tTb927.11.5430\t\tGO:0008094\tGO_REF:0000012\tISA\tUniProtKB:P32863\tF\tDNA repair and recombination protein RAD54, putative\tTb11.02.3110\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5440\tTb927.11.5440\t\tGO:0004470\tPMID:21105905\tIDA\t\tF\tNADP-dependent malic enzyme, cytosolic\tTb11.02.3120\tmRNA\ttaxon:185431\t20120521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5440\tTb927.11.5440\t\tGO:0004473\tPMID:21105905\tIDA\t\tF\tNADP-dependent malic enzyme, cytosolic\tTb11.02.3120\tmRNA\ttaxon:185431\t20170811\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5440\tTb927.11.5440\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADP-dependent malic enzyme, cytosolic\tTb11.02.3120\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5440\tTb927.11.5440\t\tGO:0005829\tPMID:21105905\tIDA\t\tC\tNADP-dependent malic enzyme, cytosolic\tTb11.02.3120\tmRNA\ttaxon:185431\t20120521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5440\tTb927.11.5440\t\tGO:0006108\tPMID:21105905\tIDA\t\tP\tNADP-dependent malic enzyme, cytosolic\tTb11.02.3120\tmRNA\ttaxon:185431\t20120521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5440\tTb927.11.5440\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tNADP-dependent malic enzyme, cytosolic\tTb11.02.3120\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5450\tTb927.11.5450\t\tGO:0004470\tGO_REF:0000011\tISM\tInterPro:IPR001891\tF\tmalic enzyme\tTb11.02.3130\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5450\tTb927.11.5450\t\tGO:0005739\tPMID:21105905\tIDA\t\tC\tmalic enzyme\tTb11.02.3130\tmRNA\ttaxon:185431\t20120521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5450\tTb927.11.5450\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmalic enzyme\tTb11.02.3130\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5450\tTb927.11.5450\t\tGO:0006108\tGO_REF:0000011\tISM\tInterPro:IPR001891\tP\tmalic enzyme\tTb11.02.3130\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5470\tTb927.11.5470\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3150\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5480\tTb927.11.5480\t\tGO:0004527\tGO_REF:0000011\tISM\tInterPro:IPR006055\tF\tphosphotransferase, putative\tTb11.02.3160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5480\tTb927.11.5480\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR006055\tC\tphosphotransferase, putative\tTb11.02.3160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5480\tTb927.11.5480\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tphosphotransferase, putative\tTb11.02.3160\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5480\tTb927.11.5480\t\tGO:0006388\tGO_REF:0000011\tISM\tInterPro:IPR002745\tP\tphosphotransferase, putative\tTb11.02.3160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5480\tTb927.11.5480\t\tGO:0016772\tGO_REF:0000011\tISM\tInterPro:IPR002745\tF\tphosphotransferase, putative\tTb11.02.3160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5490\tTb927.11.5490\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPolyphosphoinositide phosphatase, putative\tTb11.02.3170\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5490\tTb927.11.5490\t\tGO:0006897\tGO_REF:0000011\tISM\tInterPro:IPR002013\tP\tPolyphosphoinositide phosphatase, putative\tTb11.02.3170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5490\tTb927.11.5490\t\tGO:0046488\tGO_REF:0000012\tISA\tUniProtKB:FIG4_MOUSE\tP\tPolyphosphoinositide phosphatase, putative\tTb11.02.3170\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.550\tSCD6\t\tGO:0000932\tPMID:22366449\tIDA\t\tC\tSuppressor of clathrin deficiency 6, putative\tTb11.03.0530\tmRNA\ttaxon:185431\t20171006\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.550\tSCD6\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tSuppressor of clathrin deficiency 6, putative\tTb11.03.0530\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.550\tSCD6\t\tGO:0005737\tPMID:18713834\tIDA\t\tC\tSuppressor of clathrin deficiency 6, putative\tTb11.03.0530\tmRNA\ttaxon:185431\t20100922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.550\tSCD6\t\tGO:0017148\tPMID:24087925\tIMP\t\tP\tSuppressor of clathrin deficiency 6, putative\tTb11.03.0530\tmRNA\ttaxon:185431\t20200406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.550\tSCD6\t\tGO:0035770\tPMID:30550896\tHDA\t\tC\tSuppressor of clathrin deficiency 6, putative\tTb11.03.0530\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5500\tKRIPP1\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb11.01.8620\tP\tPentatricopeptide repeat protein (PPR), putative\tmS51|Tb11.02.3180\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5500\tKRIPP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tmS51|Tb11.02.3180\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5500\tKRIPP1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tmS51|Tb11.02.3180\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5500\tKRIPP1\t\tGO:0005739\tPMID:17646387\tISM\t\tC\tPentatricopeptide repeat protein (PPR), putative\tmS51|Tb11.02.3180\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5500\tKRIPP1\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb11.01.8620\tC\tPentatricopeptide repeat protein (PPR), putative\tmS51|Tb11.02.3180\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5510\tTb927.11.5510\t\tGO:0003777\tGO_REF:0000012\tISA\tUniProtKB:O14645\tF\tdynein light chain p28, axonemal, putative\tTb11.02.3200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5510\tTb927.11.5510\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdynein light chain p28, axonemal, putative\tTb11.02.3200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5510\tTb927.11.5510\t\tGO:0005858\tGO_REF:0000012\tISA\tUniProtKB:O14645\tC\tdynein light chain p28, axonemal, putative\tTb11.02.3200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5520\tTIM\t\tGO:0004807\tPMID:30268499\tIMP\t\tF\ttriosephosphate isomerase\tTb11.02.3210\tmRNA\ttaxon:185431\t20190107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5520\tTIM\t\tGO:0004807\tPMID:31992784\tIDA\t\tF\ttriosephosphate isomerase\tTb11.02.3210\tmRNA\ttaxon:185431\t20200721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5520\tTIM\t\tGO:0004807\tPMID:17176070\tIMP\t\tF\ttriosephosphate isomerase\tTb11.02.3210\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5520\tTIM\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttriosephosphate isomerase\tTb11.02.3210\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5520\tTIM\t\tGO:0006096\tPMID:17176070\tIMP\t\tP\ttriosephosphate isomerase\tTb11.02.3210\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5520\tTIM\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\ttriosephosphate isomerase\tTb11.02.3210\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5520\tTIM\t\tGO:0020015\tPMID:3015595\tTAS\t\tC\ttriosephosphate isomerase\tTb11.02.3210\tmRNA\ttaxon:185431\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5530\tTb927.11.5530\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.02.3230\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5530\tTb927.11.5530\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.02.3230\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5530\tTb927.11.5530\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.02.3230\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5530\tTb927.11.5530\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.02.3230\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5540\tTb927.11.5540\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\temp24/gp25L/p24 family/GOLD, putative\tTb11.02.3240\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5550\tPOLQ\t\tGO:0003887\tGO_REF:0000024\tISO\tGeneDB:LinJ.24.0910\tF\tDNA polymerase theta\tTb11.02.3250\tmRNA\ttaxon:185431\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5550\tPOLQ\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:LinJ.24.0910\tC\tDNA polymerase theta\tTb11.02.3250\tmRNA\ttaxon:185431\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5550\tPOLQ\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA polymerase theta\tTb11.02.3250\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5550\tPOLQ\t\tGO:0019985\tGO_REF:0000024\tISO\tGeneDB:LinJ.24.0910\tP\tDNA polymerase theta\tTb11.02.3250\tmRNA\ttaxon:185431\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5550\tPOLQ\t\tGO:0042162\tPMID:29385523\tIDA\t\tF\tDNA polymerase theta\tTb11.02.3250\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5550\tPOLQ\t\tGO:0070565\tPMID:29385523\tIPI\tGeneDB:Tb927.10.12850\tC\tDNA polymerase theta\tTb11.02.3250\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5560\tTb927.11.5560\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3260\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5560\tTb927.11.5560\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5560\tTb927.11.5560\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0003677\tPMID:21799014\tIDA\t\tF\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001208\tF\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0005634\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0006270\tPMID:21799014\tIMP\t\tP\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0042555\tPMID:23451133\tIDA\t\tC\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0044786\tPMID:21799014\tIMP\t\tP\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5570\tMCM5\t\tGO:0071162\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM5\tTb11.02.3270\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5590\tAP1\t\tGO:0005680\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tC\tAnaphase-promoting complex-associated protein AP1\tTb11.02.3290\tmRNA\ttaxon:185431\t20180123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5590\tAP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAnaphase-promoting complex-associated protein AP1\tTb11.02.3290\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5590\tAP1\t\tGO:0007049\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tP\tAnaphase-promoting complex-associated protein AP1\tTb11.02.3290\tmRNA\ttaxon:185431\t20180123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.560\tTb927.11.560\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0520\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.560\tTb927.11.560\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0520\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5600\tATOM14\t\tGO:0005515\tPMID:22267727\tIPI\tGeneDB:Tb927.11.12740\tF\ttRNA import complex component, putative\tTb11.02.3310|POMP14\tmRNA\ttaxon:185431\t20170926\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5600\tATOM14\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\ttRNA import complex component, putative\tTb11.02.3310|POMP14\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5600\tATOM14\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\ttRNA import complex component, putative\tTb11.02.3310|POMP14\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5600\tATOM14\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\ttRNA import complex component, putative\tTb11.02.3310|POMP14\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5600\tATOM14\t\tGO:0005742\tPMID:25808593\tIPI\tGeneDB:Tb927.9.9660\tC\ttRNA import complex component, putative\tTb11.02.3310|POMP14\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5600\tATOM14\t\tGO:0006626\tPMID:25808593\tIDA\t\tP\ttRNA import complex component, putative\tTb11.02.3310|POMP14\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5600\tATOM14\t\tGO:0030150\tPMID:25808593\tIMP\t\tP\ttRNA import complex component, putative\tTb11.02.3310|POMP14\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5610\tTb927.11.5610\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRab-GTPase-TBC domain containing protein, putative\tTb11.02.3320\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5610\tTb927.11.5610\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tRab-GTPase-TBC domain containing protein, putative\tTb11.02.3320\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5610\tTb927.11.5610\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tRab-GTPase-TBC domain containing protein, putative\tTb11.02.3320\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5630\tTb927.11.5630\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3340\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5630\tTb927.11.5630\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3340\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5640\tTb927.11.5640\t\tGO:1990900\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3350\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5650\tTb927.11.5650\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000862\tF\treplication factor C, subunit 1, putative\tTb11.02.3360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5650\tTb927.11.5650\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003959\tF\treplication factor C, subunit 1, putative\tTb11.02.3360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5650\tTb927.11.5650\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\treplication factor C, subunit 1, putative\tTb11.02.3360\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5650\tTb927.11.5650\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\treplication factor C, subunit 1, putative\tTb11.02.3360\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5650\tTb927.11.5650\t\tGO:0005663\tGO_REF:0000011\tISM\tInterPro:IPR000862\tC\treplication factor C, subunit 1, putative\tTb11.02.3360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5650\tTb927.11.5650\t\tGO:0006260\tGO_REF:0000011\tISM\tInterPro:IPR000862\tP\treplication factor C, subunit 1, putative\tTb11.02.3360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5660\tTb927.11.5660\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3370\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5660\tTb927.11.5660\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3370\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5670\tTb927.11.5670\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tMnd1 family, putative\tTb11.02.3380\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5670\tTb927.11.5670\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tMnd1 family, putative\tTb11.02.3380\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0003774\tGO_REF:0000024\tISS\tGeneDB:PF3D7_0822500\tF\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0005929\tPMID:17405810\tIDA\t\tC\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20170724\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0007018\tGO_REF:0000012\tISA\tUniProtKB:Q9V3Q0_DROME\tP\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0030286\tGO_REF:0000012\tISA\tUniProtKB:Q9V3Q0_DROME\tC\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0060285\tPMID:17405810\tIMP\t\tP\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20170724\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0070286\tPMID:17405810\tIMP\t\tP\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20170724\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5690\tTb927.11.5690\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000330\tF\tSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily-related, putative\tTb11.02.3400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5690\tTb927.11.5690\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001650\tF\tSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily-related, putative\tTb11.02.3400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5690\tTb927.11.5690\t\tGO:0006281\tGO_REF:0000012\tISA\tUniProtKB:P46100\tP\tSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily-related, putative\tTb11.02.3400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.570\tTb927.11.570\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tDnaJ domain containing protein, putative\tTb11.03.0510\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.570\tTb927.11.570\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tDnaJ domain containing protein, putative\tTb11.03.0510\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.570\tTb927.11.570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.03.0510\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5710\tJ29\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\tTb11.02.3430\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5710\tJ29\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\tTb11.02.3430\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5710\tJ29\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\tTb11.02.3430\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5710\tJ29\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb11.02.3430\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5720\tTb927.11.5720\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3440\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5720\tTb927.11.5720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3440\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5720\tTb927.11.5720\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3440\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5720\tTb927.11.5720\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3440\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5730\tTb927.11.5730\t\tGO:0000375\tGO_REF:0000012\tISA\tUniProtKB:Q92620\tP\tpre-mRNA-splicing factor ATP-dependent RNA helicase, putative\tTb11.02.3460\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5730\tTb927.11.5730\t\tGO:0000398\tGO_REF:0000012\tISA\tUniProtKB:Q92620\tP\tpre-mRNA-splicing factor ATP-dependent RNA helicase, putative\tTb11.02.3460\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5730\tTb927.11.5730\t\tGO:0003676\tGO_REF:0000012\tISA\tUniProtKB:Q92620\tF\tpre-mRNA-splicing factor ATP-dependent RNA helicase, putative\tTb11.02.3460\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5730\tTb927.11.5730\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q92620\tF\tpre-mRNA-splicing factor ATP-dependent RNA helicase, putative\tTb11.02.3460\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5730\tTb927.11.5730\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpre-mRNA-splicing factor ATP-dependent RNA helicase, putative\tTb11.02.3460\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5730\tTb927.11.5730\t\tGO:0008380\tGO_REF:0000012\tISA\tUniProtKB:Q92620\tP\tpre-mRNA-splicing factor ATP-dependent RNA helicase, putative\tTb11.02.3460\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5740\tTb927.11.5740\t\tGO:0003779\tGO_REF:0000011\tISM\tInterPro:IPR003104\tF\tformin-like protein\tTb11.02.3470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5740\tTb927.11.5740\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tformin-like protein\tTb11.02.3470\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5740\tTb927.11.5740\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tformin-like protein\tTb11.02.3470\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5740\tTb927.11.5740\t\tGO:0016043\tGO_REF:0000011\tISM\tInterPro:IPR003104\tP\tformin-like protein\tTb11.02.3470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5740\tTb927.11.5740\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tformin-like protein\tTb11.02.3470\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5750\tTZP103.8\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.02.3500\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5750\tTZP103.8\t\tGO:0035869\tPMID:27519801\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.02.3500\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5760\tTb927.11.5760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3510\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5760\tTb927.11.5760\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.3510\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5770\tTb927.11.5770\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3520\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5770\tTb927.11.5770\t\tGO:0097543\tPMID:27519801\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3520\tmRNA\ttaxon:185431\t20161205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0001065\tPMID:11859084\tIMP\t\tF\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20150622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR002092\tF\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0003899\tGO_REF:0000011\tISM\tInterPro:IPR002092\tF\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0005739\tPMID:11470527\tISS\t\tC\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0006264\tPMID:11859084\tIMP\t\tP\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20150622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0006351\tGO_REF:0000011\tISM\tInterPro:IPR002092\tP\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0006390\tPMID:11859084\tIMP\t\tP\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20150622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5790\tTb927.11.5790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3540\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5790\tTb927.11.5790\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3540\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5790\tTb927.11.5790\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3540\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5800\tTb927.11.5800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3550\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5810\tTb927.11.5810\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tSurfeit locus protein 6, putative\tTb11.02.3560\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5820\tTb927.11.5820\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tInhibitor of apoptosis-promoting Bax1, putative\tTb11.02.3570\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5830\tTb927.11.5830\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tYL1 nuclear protein, putative\tTb11.02.3590\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5830\tTb927.11.5830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tYL1 nuclear protein, putative\tTb11.02.3590\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5840\tEIF1\t\tGO:0003743\tGO_REF:0000011\tISM\tInterPro:IPR001950\tF\tEukaryotic translation initiation factor 1, putative\tTb11.02.3595|SUI1\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5840\tEIF1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEukaryotic translation initiation factor 1, putative\tTb11.02.3595|SUI1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5840\tEIF1\t\tGO:0006413\tGO_REF:0000011\tISM\tInterPro:IPR001950\tP\tEukaryotic translation initiation factor 1, putative\tTb11.02.3595|SUI1\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5840\tEIF1\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tEukaryotic translation initiation factor 1, putative\tTb11.02.3595|SUI1\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5840\tEIF1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tEukaryotic translation initiation factor 1, putative\tTb11.02.3595|SUI1\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5850\tRBP38\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA-binding protein 38, putative\tTb11.02.3610\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5850\tRBP38\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tRNA-binding protein 38, putative\tTb11.02.3610\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5850\tRBP38\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein 38, putative\tTb11.02.3610\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5850\tRBP38\t\tGO:0005829\tPMID:18840477\tIDA\t\tC\tRNA-binding protein 38, putative\tTb11.02.3610\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5850\tRBP38\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tRNA-binding protein 38, putative\tTb11.02.3610\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5860\tTb927.11.5860\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tAGC/RSK family serine/threonine kinase, putative\tTb11.02.3640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5860\tTb927.11.5860\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tAGC/RSK family serine/threonine kinase, putative\tTb11.02.3640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5860\tTb927.11.5860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAGC/RSK family serine/threonine kinase, putative\tTb11.02.3640\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5860\tTb927.11.5860\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAGC/RSK family serine/threonine kinase, putative\tTb11.02.3640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5860\tTb927.11.5860\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tAGC/RSK family serine/threonine kinase, putative\tTb11.02.3640\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5860\tTb927.11.5860\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tAGC/RSK family serine/threonine kinase, putative\tTb11.02.3640\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5870\tPHD5\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tPHD finger/ GNAT domain protein 5\tTb11.02.3650\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5870\tPHD5\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tPHD finger/ GNAT domain protein 5\tTb11.02.3650\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5870\tPHD5\t\tGO:0005737\tPMID:34407985\tIDA\t\tC\tPHD finger/ GNAT domain protein 5\tTb11.02.3650\tmRNA\ttaxon:185431\t20220208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5880\tmt-LAF23\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal LSU assembly factor 23\tTb11.02.3670\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5880\tmt-LAF23\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal LSU assembly factor 23\tTb11.02.3670\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5880\tmt-LAF23\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal LSU assembly factor 23\tTb11.02.3670\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5880\tmt-LAF23\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitoribosomal LSU assembly factor 23\tTb11.02.3670\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5880\tmt-LAF23\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal LSU assembly factor 23\tTb11.02.3670\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5880\tmt-LAF23\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal LSU assembly factor 23\tTb11.02.3670\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5880\tmt-LAF23\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tMitoribosomal LSU assembly factor 23\tTb11.02.3670\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5890\tTb927.11.5890\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF4505), putative\tTb11.02.3680\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.590\tTb927.11.590\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.03.0490\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5900\tTb927.11.5900\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3690\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5920\tJ58\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tconserved protein\tTb11.02.3720\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5920\tJ58\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tconserved protein\tTb11.02.3720\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5920\tJ58\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tconserved protein\tTb11.02.3720\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5940\tTb927.11.5940\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.02.3740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5940\tTb927.11.5940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.02.3740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5940\tTb927.11.5940\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.02.3740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5950\tTb927.11.5950\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3760\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5950\tTb927.11.5950\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3760\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5960\tTb927.11.5960\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.02.3770\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5970\tTb927.11.5970\t\tGO:0004629\tGO_REF:0000011\tISM\tInterPro:IPR000909\tF\tphosphoinositide-specific phospholipase C\tTb11.02.3780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5970\tTb927.11.5970\t\tGO:0005509\tPMID:25769297\tIDA\t\tF\tphosphoinositide-specific phospholipase C\tTb11.02.3780\tmRNA\ttaxon:185431\t20171005\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5970\tTb927.11.5970\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphoinositide-specific phospholipase C\tTb11.02.3780\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5970\tTb927.11.5970\t\tGO:0006629\tGO_REF:0000011\tISM\tInterPro:IPR001711\tP\tphosphoinositide-specific phospholipase C\tTb11.02.3780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5970\tTb927.11.5970\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR000008\tC\tphosphoinositide-specific phospholipase C\tTb11.02.3780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5970\tTb927.11.5970\t\tGO:0031982\tPMID:25769297\tIDA\t\tC\tphosphoinositide-specific phospholipase C\tTb11.02.3780\tmRNA\ttaxon:185431\t20171005\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5970\tTb927.11.5970\t\tGO:0035556\tGO_REF:0000011\tISM\t\tP\tphosphoinositide-specific phospholipase C\tTb11.02.3780\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5970\tTb927.11.5970\t\tGO:0050429\tPMID:25769297\tIDA\t\tF\tphosphoinositide-specific phospholipase C\tTb11.02.3780\tmRNA\ttaxon:185431\t20171005\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5990\tmt-LAF4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal LSU assembly factor 4\tTb11.02.3800\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5990\tmt-LAF4\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tMitoribosomal LSU assembly factor 4\tTb11.02.3800\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.600\tTb927.11.600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.03.0475\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.600\tTb927.11.600\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.03.0475\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.600\tTb927.11.600\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.03.0475\tmRNA\ttaxon:185431\t20170525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6000\tMRPL4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial ribosomal protein L4\tTb11.02.3810\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6000\tMRPL4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial ribosomal protein L4\tTb11.02.3810\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6000\tMRPL4\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tmitochondrial ribosomal protein L4\tTb11.02.3810\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6010\tTb927.11.6010\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\tTb11.02.3830\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6010\tTb927.11.6010\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tconserved protein, unknown function\tTb11.02.3830\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6010\tTb927.11.6010\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tconserved protein, unknown function\tTb11.02.3830\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6010\tTb927.11.6010\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tconserved protein, unknown function\tTb11.02.3830\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6030\tTbRLP\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tras-like small GTPase, putative\tTb11.02.3850\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6030\tTbRLP\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tras-like small GTPase, putative\tTb11.02.3850\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6030\tTbRLP\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\tras-like small GTPase, putative\tTb11.02.3850\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6040\tTb927.11.6040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNodulin-like, putative\tTb11.02.3860\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6040\tTb927.11.6040\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNodulin-like, putative\tTb11.02.3860\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6050\tTb927.11.6050\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tFlagellar-associated PapD-like, putative\tTb11.02.3880\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6070\tTb927.11.6070\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3900\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6070\tTb927.11.6070\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3900\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6090\tTb927.11.6090\t\tGO:0004536\tGO_REF:0000011\tISM\tInterPro:IPR001130\tF\ttatD related deoxyribonuclease, putative\tTb11.02.3920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6090\tTb927.11.6090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttatD related deoxyribonuclease, putative\tTb11.02.3920\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6090\tTb927.11.6090\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001130\tP\ttatD related deoxyribonuclease, putative\tTb11.02.3920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.610\tTb927.11.610\t\tGO:0005737\tPMID:25972344\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0470\tmRNA\ttaxon:185431\t20160913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.610\tTb927.11.610\t\tGO:0005929\tPMID:25972344\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0470\tmRNA\ttaxon:185431\t20160913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6100\tTb927.11.6100\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.3930\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6100\tTb927.11.6100\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3930\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6100\tTb927.11.6100\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.3930\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003439\tF\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR003439\tP\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0009898\tGO_REF:0000011\tISM\tPfam:PF00005\tC\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0042626\tGO_REF:0000011\tISM\tPfam:PF00005\tF\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6130\tTb927.11.6130\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSKP1-like protein\tTb11.02.3990\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6130\tTb927.11.6130\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tSKP1-like protein\tTb11.02.3990\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6130\tTb927.11.6130\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001232\tP\tSKP1-like protein\tTb11.02.3990\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6130\tTb927.11.6130\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tSKP1-like protein\tTb11.02.3990\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6130\tTb927.11.6130\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tSKP1-like protein\tTb11.02.3990\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6140\tTb927.11.6140\t\tGO:0000314\tGO_REF:0000011\tISM\tPfam:PF00410\tC\t40S ribosomal protein S15A, putative\tTb11.02.4000\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6140\tTb927.11.6140\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:PF00410\tF\t40S ribosomal protein S15A, putative\tTb11.02.4000\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6140\tTb927.11.6140\t\tGO:0006412\tGO_REF:0000011\tISM\tPfam:PF00410\tP\t40S ribosomal protein S15A, putative\tTb11.02.4000\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6150\tOXA1\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\t60Kd inner membrane protein, putative\tTb11.02.4020\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6150\tOXA1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t60Kd inner membrane protein, putative\tTb11.02.4020\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6150\tOXA1\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\t60Kd inner membrane protein, putative\tTb11.02.4020\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6160\tERF3\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\teukaryotic release factor 3, putative\tTb11.02.4030\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6160\tERF3\t\tGO:0003746\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00485\tF\teukaryotic release factor 3, putative\tTb11.02.4030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6160\tERF3\t\tGO:0005525\tGO_REF:0000012\tISA\tUniProtKB:P15170\tF\teukaryotic release factor 3, putative\tTb11.02.4030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6160\tERF3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\teukaryotic release factor 3, putative\tTb11.02.4030\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6160\tERF3\t\tGO:0006412\tGO_REF:0000012\tISA\tUniProtKB:P15170\tP\teukaryotic release factor 3, putative\tTb11.02.4030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6160\tERF3\t\tGO:0006414\tGO_REF:0000024\tISS\t\tP\teukaryotic release factor 3, putative\tTb11.02.4030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6160\tERF3\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\teukaryotic release factor 3, putative\tTb11.02.4030\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6170\tSEC31\t\tGO:0005515\tPMID:27252375\tIPI\tGeneDB:Tb927.10.1070\tF\tprotein transport protein SEC31, putative\tTb11.02.4040\tmRNA\ttaxon:185431\t20160826\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6170\tSEC31\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:O94979\tP\tprotein transport protein SEC31, putative\tTb11.02.4040\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6170\tSEC31\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tprotein transport protein SEC31, putative\tTb11.02.4040\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6170\tSEC31\t\tGO:0070971\tPMID:27252375\tIDA\t\tC\tprotein transport protein SEC31, putative\tTb11.02.4040\tmRNA\ttaxon:185431\t20160826\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6180\tTb927.11.6180\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t60S ribosomal protein L28, putative\tTb11.02.4050\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6180\tTb927.11.6180\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:PR002672\tF\t60S ribosomal protein L28, putative\tTb11.02.4050\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6180\tTb927.11.6180\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L28, putative\tTb11.02.4050\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6180\tTb927.11.6180\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002672\tC\t60S ribosomal protein L28, putative\tTb11.02.4050\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6180\tTb927.11.6180\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002672\tP\t60S ribosomal protein L28, putative\tTb11.02.4050\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.620\tRaptor\t\tGO:0005515\tPMID:18796613\tIPI\tGeneDB:Tb927.10.8420\tF\tRegulatory-associated protein of TOR1\tTb11.03.0460|KOG1\tmRNA\ttaxon:185431\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.620\tRaptor\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRegulatory-associated protein of TOR1\tTb11.03.0460|KOG1\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.620\tRaptor\t\tGO:0008361\tPMID:18796613\tIMP\t\tP\tRegulatory-associated protein of TOR1\tTb11.03.0460|KOG1\tmRNA\ttaxon:185431\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.620\tRaptor\t\tGO:1903432\tPMID:18796613\tIMP\t\tP\tRegulatory-associated protein of TOR1\tTb11.03.0460|KOG1\tmRNA\ttaxon:185431\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6200\tTb927.11.6200\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t60S ribosomal protein L28, putative\tTb11.02.4070\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6200\tTb927.11.6200\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002672\tF\t60S ribosomal protein L28, putative\tTb11.02.4070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6200\tTb927.11.6200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L28, putative\tTb11.02.4070\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6200\tTb927.11.6200\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR002672\tC\t60S ribosomal protein L28, putative\tTb11.02.4070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6200\tTb927.11.6200\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002672\tP\t60S ribosomal protein L28, putative\tTb11.02.4070\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6210\tCYP51\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tLanosterol 14-alpha demethylase\tTb11.02.4080|LDM\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6210\tCYP51\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tLanosterol 14-alpha demethylase\tTb11.02.4080|LDM\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6210\tCYP51\t\tGO:0008398\tGO_REF:0000024\tISO\tGeneDB:LinJ.11.1100\tF\tLanosterol 14-alpha demethylase\tTb11.02.4080|LDM\tmRNA\ttaxon:185431\t20110707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6210\tCYP51\t\tGO:0020037\tGO_REF:0000024\tISO\tGeneDB:LinJ.11.1100\tF\tLanosterol 14-alpha demethylase\tTb11.02.4080|LDM\tmRNA\ttaxon:185431\t20101112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6210\tCYP51\t\tGO:0044091\tGO_REF:0000024\tISO\tGeneDB:LinJ.11.1100\tP\tLanosterol 14-alpha demethylase\tTb11.02.4080|LDM\tmRNA\ttaxon:185431\t20110707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0006897\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0005783\tPMID:20052285\tEXP\t\tC\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20100609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0005784\tGO_REF:0000012\tISA\tUniProtKB:SC61A_YEAST\tC\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20141203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0009306\tGO_REF:0000011\tISM\tInterPro:IPR002208\tP\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0015450\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00967\tF\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6240\tTb927.11.6240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4110\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6240\tTb927.11.6240\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.02.4110\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6250\tTb927.11.6250\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.02.4120\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6250\tTb927.11.6250\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.02.4120\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6250\tTb927.11.6250\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.02.4120\tmRNA\ttaxon:185431\t20170525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6270\tPIP5Pase1\t\tGO:0004445\tGO_REF:0000012\tISA\tUniProtKB:Q14642\tF\tinositol-1,4,5-trisphosphate (IP3) 5-phosphatase, putative\tTb11.02.4140\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6270\tPIP5Pase1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tinositol-1,4,5-trisphosphate (IP3) 5-phosphatase, putative\tTb11.02.4140\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6270\tPIP5Pase1\t\tGO:0035556\tGO_REF:0000011\tISM\tInterPro:IPR005135\tP\tinositol-1,4,5-trisphosphate (IP3) 5-phosphatase, putative\tTb11.02.4140\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6280\tPPDK\t\tGO:0016310\tGO_REF:0000011\tISM\tInterPro:IPR002192\tP\tpyruvate phosphate dikinase\tTb11.02.4150\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6280\tPPDK\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tpyruvate phosphate dikinase\tTb11.02.4150\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6280\tPPDK\t\tGO:0020015\tPMID:9653123\tIDA\t\tC\tpyruvate phosphate dikinase\tTb11.02.4150\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6280\tPPDK\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tpyruvate phosphate dikinase\tTb11.02.4150\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6280\tPPDK\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\tpyruvate phosphate dikinase\tTb11.02.4150\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6280\tPPDK\t\tGO:0050242\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01828\tF\tpyruvate phosphate dikinase\tTb11.02.4150\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6290\tTb927.11.6290\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tHIT zinc finger, putative\tTb11.02.4160\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6290\tTb927.11.6290\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tHIT zinc finger, putative\tTb11.02.4160\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.630\tRPA135\t\tGO:0003899\tGO_REF:0000011\tISM\tPfam:PF00562\tF\tRNA polymerase I second largest subunit\tTb11.03.0450|RPA2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.630\tRPA135\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR009674\tC\tRNA polymerase I second largest subunit\tTb11.03.0450|RPA2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.630\tRPA135\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA polymerase I second largest subunit\tTb11.03.0450|RPA2\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.630\tRPA135\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA polymerase I second largest subunit\tTb11.03.0450|RPA2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.630\tRPA135\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tRNA polymerase I second largest subunit\tTb11.03.0450|RPA2\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.630\tRPA135\t\tGO:0006351\tGO_REF:0000011\tISM\tPfam:PF00562\tP\tRNA polymerase I second largest subunit\tTb11.03.0450|RPA2\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6300\tTb927.11.6300\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\t40S ribosomal protein S5, putative\tTb11.02.4170\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6300\tTb927.11.6300\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01028\tF\t40S ribosomal protein S5, putative\tTb11.02.4170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6300\tTb927.11.6300\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S5, putative\tTb11.02.4170\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6300\tTb927.11.6300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S5, putative\tTb11.02.4170\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6300\tTb927.11.6300\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01028\tP\t40S ribosomal protein S5, putative\tTb11.02.4170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0005737\tPMID:10867008\tIC\t\tC\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0006098\tPMID:10867008\tISA\tUniProtKB:DEVB_ACTAC|UniProtKB:SOL1_YEAST\tP\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0006098\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01198\tP\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0017057\tPMID:10867008\tEXP\t\tF\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0020015\tPMID:10867008\tEXP\t\tC\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6350\tBDF7\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tBDF-ATPase, putative\tTb11.02.4210\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6350\tBDF7\t\tGO:0005634\tPMID:34407985\tIDA\t\tC\tBDF-ATPase, putative\tTb11.02.4210\tmRNA\ttaxon:185431\t20220207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6350\tBDF7\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tBDF-ATPase, putative\tTb11.02.4210\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6350\tBDF7\t\tGO:0016887\tGO_REF:0000011\tISM\tInterPro:IPR003959\tF\tBDF-ATPase, putative\tTb11.02.4210\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6350\tBDF7\t\tGO:0019538\tGO_REF:0000011\tISM\tPfam:PF00004\tP\tBDF-ATPase, putative\tTb11.02.4210\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6360\tTb927.11.6360\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000988\tF\t60S ribosomal protein L24, putative\tTb11.02.4220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6360\tTb927.11.6360\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000988\tC\t60S ribosomal protein L24, putative\tTb11.02.4220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6360\tTb927.11.6360\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\t60S ribosomal protein L24, putative\tTb11.02.4220\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6360\tTb927.11.6360\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000988\tC\t60S ribosomal protein L24, putative\tTb11.02.4220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6360\tTb927.11.6360\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000988\tP\t60S ribosomal protein L24, putative\tTb11.02.4220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6380\tTb927.11.6380\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4240\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6390\tTb927.11.6390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSTART domain containing protein, putative\tTb11.02.4250\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.640\tTb927.11.640\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.03.0440\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.640\tTb927.11.640\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.03.0440\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.640\tTb927.11.640\t\tGO:0005739\tPMID:17646387\tISM\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.03.0440\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.640\tTb927.11.640\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.03.0440\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.640\tTb927.11.640\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tPentatricopeptide repeat protein (PPR), putative\tTb11.03.0440\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6400\tTb927.11.6400\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tTb11.02.4260\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6400\tTb927.11.6400\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tTb11.02.4260\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6400\tTb927.11.6400\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\tTb11.02.4260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6400\tTb927.11.6400\t\tGO:0005871\tPMID:16481395\tEXP\t\tC\tkinesin, putative\tTb11.02.4260\tmRNA\ttaxon:185431\t20110420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6400\tTb927.11.6400\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\tTb11.02.4260\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6400\tTb927.11.6400\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tkinesin, putative\tTb11.02.4260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6400\tTb927.11.6400\t\tGO:0051286\tPMID:29931198\tIDA\t\tC\tkinesin, putative\tTb11.02.4260\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6410\tUPF2\t\tGO:0005515\tPMID:21957477\tIPI\tGeneDB:Tb927.5.2140\tF\tregulator of nonsense transcripts 2\tTb11.02.4270\tmRNA\ttaxon:185431\t20190103\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6410\tUPF2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tregulator of nonsense transcripts 2\tTb11.02.4270\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6420\tTb927.11.6420\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4280\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6420\tTb927.11.6420\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6430\tTb927.11.6430\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\thypothetical protein, conserved\tTb11.02.4290\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6430\tTb927.11.6430\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4290\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6430\tTb927.11.6430\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4290\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6430\tTb927.11.6430\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.02.4290\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6440\tENF\t\tGO:0003677\tPMID:22024471\tIDA\t\tF\tEssential Nuclear Factor, 49 kDa\tTb11.02.4300\tmRNA\ttaxon:185431\t20220228\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6440\tENF\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tEssential Nuclear Factor, 49 kDa\tTb11.02.4300\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6440\tENF\t\tGO:0005634\tPMID:22024471\tIDA\t\tC\tEssential Nuclear Factor, 49 kDa\tTb11.02.4300\tmRNA\ttaxon:185431\t20220228\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6440\tENF\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEssential Nuclear Factor, 49 kDa\tTb11.02.4300\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6440\tENF\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tEssential Nuclear Factor, 49 kDa\tTb11.02.4300\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6460\tTb927.11.6460\t\tGO:0005737\tPMID:25972344\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4320\tmRNA\ttaxon:185431\t20160913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6460\tTb927.11.6460\t\tGO:0005929\tPMID:25972344\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4320\tmRNA\ttaxon:185431\t20160913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6460\tTb927.11.6460\t\tGO:0005929\tPMID:29781112\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4320\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6460\tTb927.11.6460\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4320\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6470\tMIC16\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMICOS complex subunit MIC16\tTb11.02.4330\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6470\tMIC16\t\tGO:0061617\tPMID:30415698\tIDA\t\tC\tMICOS complex subunit MIC16\tTb11.02.4330\tmRNA\ttaxon:185431\t20181204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6480\tTb927.11.6480\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tFHA domain containing protein, putative\tTb11.02.4335\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6480\tTb927.11.6480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFHA domain containing protein, putative\tTb11.02.4335\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.650\tMED-T5\t\tGO:0005730\tPMID:20876299\tIDA\t\tC\tmediator of rna polymerase ii transcription subunit 5\tTb11.03.0430\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.650\tMED-T5\t\tGO:0016592\tPMID:20876299\tIPI\tGeneDB:Tb927.11.15710\tC\tmediator of rna polymerase ii transcription subunit 5\tTb11.03.0430\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6500\tTb927.11.6500\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001931\tF\t40S ribosomal protein S21, putative\tTb11.02.4350\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6500\tTb927.11.6500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S21, putative\tTb11.02.4350\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6500\tTb927.11.6500\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001931\tC\t40S ribosomal protein S21, putative\tTb11.02.4350\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6500\tTb927.11.6500\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001931\tP\t40S ribosomal protein S21, putative\tTb11.02.4350\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6500\tTb927.11.6500\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\t40S ribosomal protein S21, putative\tTb11.02.4350\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6510\tTb927.11.6510\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001931\tF\t40S ribosomal protein S21, putative\tTb11.02.4360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6510\tTb927.11.6510\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t40S ribosomal protein S21, putative\tTb11.02.4360\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6510\tTb927.11.6510\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001931\tC\t40S ribosomal protein S21, putative\tTb11.02.4360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6510\tTb927.11.6510\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001931\tP\t40S ribosomal protein S21, putative\tTb11.02.4360\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6530\tTb927.11.6530\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4380\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6540\tTb927.11.6540\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4390\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6550\tPNT1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPUF nine target 1\tTb11.02.4400\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6550\tPNT1\t\tGO:0020023\tPMID:19714224\tIDA\t\tC\tPUF nine target 1\tTb11.02.4400\tmRNA\ttaxon:185431\t20091021\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6560\tPOC11\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tCentriole protein POC11, putative\tTb11.02.4410\tmRNA\ttaxon:185431\t20170105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6560\tPOC11\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tCentriole protein POC11, putative\tTb11.02.4410\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6570\tTb927.11.6570\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tNodulin-like, putative\tTb11.02.4420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6570\tTb927.11.6570\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tNodulin-like, putative\tTb11.02.4420\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6570\tTb927.11.6570\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tNodulin-like, putative\tTb11.02.4420\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6570\tTb927.11.6570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNodulin-like, putative\tTb11.02.4420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6580\tTb927.11.6580\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4430\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6590\tTb927.11.6590\t\tGO:0004177\tGO_REF:0000011\tISM\tInterPro:IPR000819\tF\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.4440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6590\tTb927.11.6590\t\tGO:0005515\tPMID:26272611\tIPI\tGeneDB:Tb927.7.6310\tF\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.4440\tmRNA\ttaxon:185431\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6590\tTb927.11.6590\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000819\tC\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.4440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6590\tTb927.11.6590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.4440\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6590\tTb927.11.6590\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR000819\tP\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.4440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.660\tTb927.11.660\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpredicted zinc finger protein\tTb11.03.0435\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6600\tTb927.11.6600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\tTb11.02.4450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6600\tTb927.11.6600\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tconserved protein, unknown function\tTb11.02.4450\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6600\tTb927.11.6600\t\tGO:0010494\tPMID:26187993\tIDA\t\tC\tconserved protein, unknown function\tTb11.02.4450\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6600\tTb927.11.6600\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tconserved protein, unknown function\tTb11.02.4450\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6600\tTb927.11.6600\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\tTb11.02.4450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6600\tTb927.11.6600\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tconserved protein, unknown function\tTb11.02.4450\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6600\tTb927.11.6600\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tconserved protein, unknown function\tTb11.02.4450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6620\tNOP47\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR001878\tF\tnucleic acid binding protein, putative\tTb11.02.4470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6620\tNOP47\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tnucleic acid binding protein, putative\tTb11.02.4470\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6620\tNOP47\t\tGO:0005730\tPMID:29931198\tIDA\t\tC\tnucleic acid binding protein, putative\tTb11.02.4470\tmRNA\ttaxon:185431\t20180626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6620\tNOP47\t\tGO:0005819\tPMID:29931198\tIDA\t\tC\tnucleic acid binding protein, putative\tTb11.02.4470\tmRNA\ttaxon:185431\t20190111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6630\tTb927.11.6630\t\tGO:0004485\tGO_REF:0000012\tISA\tUniProtKB:Q9HCC0\tF\t3-methylcrotonoyl-CoA carboxylase beta subunit, putative\tTb11.02.4480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6630\tTb927.11.6630\t\tGO:0005739\tPMID:15223320\tISM\t\tC\t3-methylcrotonoyl-CoA carboxylase beta subunit, putative\tTb11.02.4480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6630\tTb927.11.6630\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\t3-methylcrotonoyl-CoA carboxylase beta subunit, putative\tTb11.02.4480\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6630\tTb927.11.6630\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t3-methylcrotonoyl-CoA carboxylase beta subunit, putative\tTb11.02.4480\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0004362\tGO_REF:0000012\tISA\tUniProtKB:Q9VJC0_DROME\tF\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6660\tTb927.11.6660\t\tGO:0005634\tPMID:33589495\tIDA\t\tC\tkDNA-linked TEX-like protein\tTb11.02.4500\tmRNA\ttaxon:185431\t20220512\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6660\tTb927.11.6660\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tkDNA-linked TEX-like protein\tTb11.02.4500\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6660\tTb927.11.6660\t\tGO:0020023\tPMID:33589495\tIDA\t\tC\tkDNA-linked TEX-like protein\tTb11.02.4500\tmRNA\ttaxon:185431\t20220512\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6660\tTb927.11.6660\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tkDNA-linked TEX-like protein\tTb11.02.4500\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6660\tTb927.11.6660\t\tGO:0120121\tPMID:33589495\tIPI\tGeneDB:Tb927.7.2390\tC\tkDNA-linked TEX-like protein\tTb11.02.4500\tmRNA\ttaxon:185431\t20220512\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6680\tTb927.11.6680\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002293\tF\tamino acid permease/transporter, putative\tTb11.02.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6680\tTb927.11.6680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamino acid permease/transporter, putative\tTb11.02.4520\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6680\tTb927.11.6680\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002293\tP\tamino acid permease/transporter, putative\tTb11.02.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6680\tTb927.11.6680\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid permease/transporter, putative\tTb11.02.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6690\tTb927.11.6690\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tNEK family Serine/threonine-protein kinase, putative\tTb11.02.4530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6690\tTb927.11.6690\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tNEK family Serine/threonine-protein kinase, putative\tTb11.02.4530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6690\tTb927.11.6690\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNEK family Serine/threonine-protein kinase, putative\tTb11.02.4530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.670\tTb927.11.670\t\tGO:0005829\tPMID:19416477\tEXP\t\tC\tepsinR\tTb11.50.0006\tmRNA\ttaxon:185431\t20090511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.670\tTb927.11.670\t\tGO:0006898\tGO_REF:0000012\tISA\tUniProtKB:O88339\tP\tepsinR\tTb11.50.0006\tmRNA\ttaxon:185431\t20090511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.670\tTb927.11.670\t\tGO:0010008\tPMID:19416477\tEXP\t\tC\tepsinR\tTb11.50.0006\tmRNA\ttaxon:185431\t20090511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.670\tTb927.11.670\t\tGO:0020016\tPMID:19416477\tEXP\t\tC\tepsinR\tTb11.50.0006\tmRNA\ttaxon:185431\t20090511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.670\tTb927.11.670\t\tGO:0030132\tGO_REF:0000012\tISA\tUniProtKB:O88339\tC\tepsinR\tTb11.50.0006\tmRNA\ttaxon:185431\t20090511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.670\tTb927.11.670\t\tGO:0030276\tGO_REF:0000012\tISA\tUniProtKB:O88339\tF\tepsinR\tTb11.50.0006\tmRNA\ttaxon:185431\t20090511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6700\tTb927.11.6700\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.4535\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6720\tTb927.11.6720\t\tGO:0004482\tGO_REF:0000011\tISM\tPANTHER:PTHR12189:SF3|InterPro:IPR004971\tF\tmRNA cap guanine-N7 methyltransferase, putative\tTb11.02.4550\tmRNA\ttaxon:185431\t20140711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6720\tTb927.11.6720\t\tGO:0005515\tPMID:24962368\tIPI\tGeneDB:Tb927.5.1490\tF\tmRNA cap guanine-N7 methyltransferase, putative\tTb11.02.4550\tmRNA\ttaxon:185431\t20140711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6720\tTb927.11.6720\t\tGO:0010494\tPMID:26187993\tIDA\t\tC\tmRNA cap guanine-N7 methyltransferase, putative\tTb11.02.4550\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6720\tTb927.11.6720\t\tGO:0016281\tPMID:24962368\tIPI\tGeneDB:Tb927.5.1490|GeneDB:Tb927.10.5020\tC\tmRNA cap guanine-N7 methyltransferase, putative\tTb11.02.4550\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0003723\tGO_REF:0000002\tISS\t\tF\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0005515\tPMID:23617823\tIPI\tGeneDB:Tb927.10.15170\tF\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20180126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0005730\tPMID:23617823\tIPI\tGeneDB:Tb927.10.15170\tC\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20180126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0006364\tPMID:23617823\tIMP\t\tP\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20180126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0016071\tGO_REF:0000002\tISS\t\tP\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6750\tTb927.11.6750\t\tGO:0003910\tGO_REF:0000011\tISM\tPfam:PF01068\tF\tDNA ligase, putative\tTb11.02.4580\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6750\tTb927.11.6750\t\tGO:0006260\tGO_REF:0000011\tISM\tPfam:PF01068\tP\tDNA ligase, putative\tTb11.02.4580\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6750\tTb927.11.6750\t\tGO:0006281\tGO_REF:0000011\tISM\tPfam:PF01068\tP\tDNA ligase, putative\tTb11.02.4580\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6760\tTb927.11.6760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\tTb11.02.4590\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6770\tTb927.11.6770\t\tGO:0005739\tPMID:15223320\tISM\t\tC\thypothetical protein, conserved\tTb11.02.4600\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6770\tTb927.11.6770\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.4600\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6770\tTb927.11.6770\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4600\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6770\tTb927.11.6770\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4600\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6780\tTb927.11.6780\t\tGO:0003682\tGO_REF:0000011\tISM\tInterPro:IPR000408\tF\tregulator of chromatin condensation, putative\tTb11.02.4610\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6780\tTb927.11.6780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tregulator of chromatin condensation, putative\tTb11.02.4610\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6780\tTb927.11.6780\t\tGO:0008536\tGO_REF:0000011\tISM\tInterPro:IPR000408\tF\tregulator of chromatin condensation, putative\tTb11.02.4610\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6780\tTb927.11.6780\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tregulator of chromatin condensation, putative\tTb11.02.4610\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6780\tTb927.11.6780\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000408\tP\tregulator of chromatin condensation, putative\tTb11.02.4610\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6780\tTb927.11.6780\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tregulator of chromatin condensation, putative\tTb11.02.4610\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6790\tNOP89\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleolar protein 89\tTb11.02.4620\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6790\tNOP89\t\tGO:0005730\tPMID:29931198\tIDA\t\tC\tNucleolar protein 89\tTb11.02.4620\tmRNA\ttaxon:185431\t20180625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6790\tNOP89\t\tGO:0005819\tPMID:29931198\tIDA\t\tC\tNucleolar protein 89\tTb11.02.4620\tmRNA\ttaxon:185431\t20190111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.680\tTb927.11.680\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR001147\tF\tribosomal protein L21E (60S), putative\tTb11.50.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.680\tTb927.11.680\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tribosomal protein L21E (60S), putative\tTb11.50.0005\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.680\tTb927.11.680\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR001147\tC\tribosomal protein L21E (60S), putative\tTb11.50.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.680\tTb927.11.680\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR001147\tP\tribosomal protein L21E (60S), putative\tTb11.50.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6800\tTb927.11.6800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4630\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6800\tTb927.11.6800\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4630\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6810\tTTL\t\tGO:0004835\tGO_REF:0000011\tISM\tInterPro:IPR004344\tF\ttubulin-tyrsoine ligase-like protein, putative\tTb11.02.4640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6810\tTTL\t\tGO:0005634\tPMID:29781112\tIDA\t\tC\ttubulin-tyrsoine ligase-like protein, putative\tTb11.02.4640\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6810\tTTL\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004344\tP\ttubulin-tyrsoine ligase-like protein, putative\tTb11.02.4640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6820\tTb927.11.6820\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4650\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6830\tTb927.11.6830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function(DUF2779), putative\tTb11.02.4660\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6830\tTb927.11.6830\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tDomain of unknown function(DUF2779), putative\tTb11.02.4660\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6840\tTb927.11.6840\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4670\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6850\tTb927.11.6850\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tOptic atrophy 3 protein (OPA3), putative\tTb11.02.4680\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6860\tTb927.11.6860\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.02.4690\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6860\tTb927.11.6860\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.02.4690\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6860\tTb927.11.6860\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.02.4690\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0000077\tGO_REF:0000012\tISA\tUniProtKB:P92177\tP\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0005515\tPMID:25681612\tIPI\tGeneDB:Tb927.10.14770\tF\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20200405\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P92177\tC\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0005737\tPMID:15653691\tIDA\t\tC\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20150707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0006897\tPMID:19925803\tIMP\t\tP\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20091207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0007088\tGO_REF:0000012\tISA\tUniProtKB:P92177\tP\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0016281\tPMID:24962368\tIPI\tGeneDB:Tb927.10.5020|GeneDB:Tb927.9.5460\tC\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:0045309\tGO_REF:0000012\tISA\tUniProtKB:Q9C5W6\tF\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6870\t14-3-3-II\t\tGO:1902412\tPMID:15653691\tIMP\t\tP\t14-3-3 protein 2\tTb11.02.4700\tmRNA\ttaxon:185431\t20150707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0000287\tPMID:20042610\tIDA\t\tF\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20110822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0000723\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0004003\tPMID:20042610\tIDA\t\tF\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20110822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P07271\tC\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0005739\tPMID:19646907\tIDA\t\tC\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20090805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0006310\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0051276\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.690\tTb927.11.690\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.50.0004\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.690\tTb927.11.690\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.50.0004\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.690\tTb927.11.690\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.50.0004\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0000287\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20110824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0000723\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0004003\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0005524\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20110824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0005739\tPMID:19646907\tIDA\t\tC\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20090805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0006264\tPMID:19646907\tIDA\t\tP\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20110824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0006310\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0051276\tGO_REF:0000012\tISA\tUniProtKB:P07271\tP\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6920\tTb927.11.6920\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4760\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6970\tTb927.11.6970\t\tGO:0004128\tGO_REF:0000012\tISA\tUniProtKB:P36060\tF\tNADH-cytochrome b5 reductase-like protein\tTb11.02.4800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6970\tTb927.11.6970\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-cytochrome b5 reductase-like protein\tTb11.02.4800\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6970\tTb927.11.6970\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P36060\tC\tNADH-cytochrome b5 reductase-like protein\tTb11.02.4800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6970\tTb927.11.6970\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH-cytochrome b5 reductase-like protein\tTb11.02.4800\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6970\tTb927.11.6970\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADH-cytochrome b5 reductase-like protein\tTb11.02.4800\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6970\tTb927.11.6970\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH-cytochrome b5 reductase-like protein\tTb11.02.4800\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6980\tTb927.11.6980\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tPhosphoenolpyruvate carboxykinase, related\tTb11.02.4810\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6980\tTb927.11.6980\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tPhosphoenolpyruvate carboxykinase, related\tTb11.02.4810\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6980\tTb927.11.6980\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPhosphoenolpyruvate carboxykinase, related\tTb11.02.4810\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6980\tTb927.11.6980\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tPhosphoenolpyruvate carboxykinase, related\tTb11.02.4810\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6980\tTb927.11.6980\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tPhosphoenolpyruvate carboxykinase, related\tTb11.02.4810\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6990\tTb927.11.6990\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tCalcium/calmodulin-dependent protein kinase kinase, putative\tTb11.02.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6990\tTb927.11.6990\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCalcium/calmodulin-dependent protein kinase kinase, putative\tTb11.02.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6990\tTb927.11.6990\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCalcium/calmodulin-dependent protein kinase kinase, putative\tTb11.02.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.700\tTb927.11.700\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.50.0003\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.700\tTb927.11.700\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.50.0003\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7000\tTb927.11.7000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.4850\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7010\tTb927.11.7010\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCalcium/calmodulin-dependent protein kinase kinase, putative\tTb11.02.4860\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7010\tTb927.11.7010\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCalcium/calmodulin-dependent protein kinase kinase, putative\tTb11.02.4860\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7020\tPSA4\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:Q9NDA2\tC\tproteasome alpha 7 subunit, putative\tTb11.02.4870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7020\tPSA4\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tproteasome alpha 7 subunit, putative\tTb11.02.4870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7020\tPSA4\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tproteasome alpha 7 subunit, putative\tTb11.02.4870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7020\tPSA4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome alpha 7 subunit, putative\tTb11.02.4870\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7020\tPSA4\t\tGO:0005829\tGO_REF:0000012\tISA\tUniProtKB:Q9NDA2\tC\tproteasome alpha 7 subunit, putative\tTb11.02.4870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7020\tPSA4\t\tGO:0005839\tGO_REF:0000011\tISM\tInterPro:IPR001353\tC\tproteasome alpha 7 subunit, putative\tTb11.02.4870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7020\tPSA4\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001353\tP\tproteasome alpha 7 subunit, putative\tTb11.02.4870\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7030\tTb927.11.7030\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRad51, putative\tTb11.02.4880\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7030\tTb927.11.7030\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRad51, putative\tTb11.02.4880\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7040\tTb927.11.7040\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpterin-4-alpha-carbinolamine dehydratase, putative\tTb11.02.4890\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7040\tTb927.11.7040\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tpterin-4-alpha-carbinolamine dehydratase, putative\tTb11.02.4890\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7040\tTb927.11.7040\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tpterin-4-alpha-carbinolamine dehydratase, putative\tTb11.02.4890\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7040\tTb927.11.7040\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tpterin-4-alpha-carbinolamine dehydratase, putative\tTb11.02.4890\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7040\tTb927.11.7040\t\tGO:0006729\tGO_REF:0000011\tISM\tPfam:PF01329\tP\tpterin-4-alpha-carbinolamine dehydratase, putative\tTb11.02.4890\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7040\tTb927.11.7040\t\tGO:0008124\tGO_REF:0000011\tISM\tPfam:PF01329\tF\tpterin-4-alpha-carbinolamine dehydratase, putative\tTb11.02.4890\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7040\tTb927.11.7040\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tpterin-4-alpha-carbinolamine dehydratase, putative\tTb11.02.4890\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7040\tTb927.11.7040\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tpterin-4-alpha-carbinolamine dehydratase, putative\tTb11.02.4890\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7040\tTb927.11.7040\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tpterin-4-alpha-carbinolamine dehydratase, putative\tTb11.02.4890\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7050\tESP7\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tPA domain containing protein, putative\tTb11.02.4900\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7050\tESP7\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tPA domain containing protein, putative\tTb11.02.4900\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7060\tVSP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tacidocalcisomal pyrophosphatase\tTb11.02.4910\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7060\tVSP1\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR008162\tP\tacidocalcisomal pyrophosphatase\tTb11.02.4910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7060\tVSP1\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tacidocalcisomal pyrophosphatase\tTb11.02.4910\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7060\tVSP1\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR008162\tC\tacidocalcisomal pyrophosphatase\tTb11.02.4910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7060\tVSP1\t\tGO:0016462\tGO_REF:0000011\tISM\tInterPro:IPR008162\tF\tacidocalcisomal pyrophosphatase\tTb11.02.4910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7070\tTb927.11.7070\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.4920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7070\tTb927.11.7070\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.4920\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7070\tTb927.11.7070\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.4920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7070\tTb927.11.7070\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.4920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7070\tTb927.11.7070\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.4920\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7080\tTb927.11.7080\t\tGO:0004427\tPMID:14615483\tIMP\t\tF\tacidocalcisomal pyrophosphatase\tTb11.02.4930|VSP1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7080\tTb927.11.7080\t\tGO:0005509\tPMID:14615483\tIDA\t\tF\tacidocalcisomal pyrophosphatase\tTb11.02.4930|VSP1\tmRNA\ttaxon:185431\t20120430\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7080\tTb927.11.7080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tacidocalcisomal pyrophosphatase\tTb11.02.4930|VSP1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7080\tTb927.11.7080\t\tGO:0006796\tPMID:14615483\tTAS\t\tP\tacidocalcisomal pyrophosphatase\tTb11.02.4930|VSP1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7080\tTb927.11.7080\t\tGO:0008270\tPMID:14615483\tIDA\t\tF\tacidocalcisomal pyrophosphatase\tTb11.02.4930|VSP1\tmRNA\ttaxon:185431\t20120430\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7080\tTb927.11.7080\t\tGO:0016462\tPMID:14615483\tIMP\t\tF\tacidocalcisomal pyrophosphatase\tTb11.02.4930|VSP1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7080\tTb927.11.7080\t\tGO:0020022\tPMID:14615483\tIDA\t\tC\tacidocalcisomal pyrophosphatase\tTb11.02.4930|VSP1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7090\tMED-T6\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tmediator of rna polymerase ii transcription subunit 6\tTb11.02.4940\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7090\tMED-T6\t\tGO:0016592\tPMID:20876299\tIPI\tGeneDB:Tb927.11.650\tC\tmediator of rna polymerase ii transcription subunit 6\tTb11.02.4940\tmRNA\ttaxon:185431\t20171009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7100\tTb927.11.7100\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR002478\tF\tcytoplasmic translation machinery associated protein, putative\tTb11.02.4950\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7100\tTb927.11.7100\t\tGO:0005829\tGO_REF:0000012\tISA\tUniProtKB:TMA20_YEAST\tC\tcytoplasmic translation machinery associated protein, putative\tTb11.02.4950\tmRNA\ttaxon:185431\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7100\tTb927.11.7100\t\tGO:0005840\tGO_REF:0000012\tISA\tUniProtKB:TMA20_YEAST\tC\tcytoplasmic translation machinery associated protein, putative\tTb11.02.4950\tmRNA\ttaxon:185431\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7100\tTb927.11.7100\t\tGO:0042254\tGO_REF:0000012\tISA\tUniProtKB:TMA20_YEAST\tP\tcytoplasmic translation machinery associated protein, putative\tTb11.02.4950\tmRNA\ttaxon:185431\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7110\tTb927.11.7110\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tmyotubularin-associated protein, putative\tTb11.02.4960\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7130\tTb927.11.7130\t\tGO:0120120\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.4980\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7140\tCSBPII_33\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tcell cycle sequence binding phosphoprotein (RBP33), putative\tTb11.02.4990\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7140\tCSBPII_33\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcell cycle sequence binding phosphoprotein (RBP33), putative\tTb11.02.4990\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7140\tCSBPII_33\t\tGO:0005737\tPMID:29781112\tIDA\t\tC\tcell cycle sequence binding phosphoprotein (RBP33), putative\tTb11.02.4990\tmRNA\ttaxon:185431\t20180814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7140\tCSBPII_33\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tcell cycle sequence binding phosphoprotein (RBP33), putative\tTb11.02.4990\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7150\tTb927.11.7150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNGG1 interacting factor 3-like\tTb11.02.5000\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7160\tCRK8\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tcdc2-related kinase 8, putative\tTb11.02.5010\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7160\tCRK8\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tcdc2-related kinase 8, putative\tTb11.02.5010\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7160\tCRK8\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tcdc2-related kinase 8, putative\tTb11.02.5010\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7160\tCRK8\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 8, putative\tTb11.02.5010\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7170\tSerRS\t\tGO:0004828\tPMID:17040903\tIDA\t\tF\tseryl-tRNA synthetase\tTb11.02.5020\tmRNA\ttaxon:185431\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7170\tSerRS\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR002314\tF\tseryl-tRNA synthetase\tTb11.02.5020\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7170\tSerRS\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tseryl-tRNA synthetase\tTb11.02.5020\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7170\tSerRS\t\tGO:0005739\tPMID:17040903\tIDA\t\tC\tseryl-tRNA synthetase\tTb11.02.5020\tmRNA\ttaxon:185431\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7170\tSerRS\t\tGO:0005829\tPMID:17040903\tIDA\t\tC\tseryl-tRNA synthetase\tTb11.02.5020\tmRNA\ttaxon:185431\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7170\tSerRS\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\tseryl-tRNA synthetase\tTb11.02.5020\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7170\tSerRS\t\tGO:0006434\tPMID:17040903\tIDA\t\tP\tseryl-tRNA synthetase\tTb11.02.5020\tmRNA\ttaxon:185431\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7180\tTb927.11.7180\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tMORN repeat, putative\tTb11.02.5030\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7190\tTb927.11.7190\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein\tTb11.v5.0050\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.720\tCAP30\t\tGO:0005856\tPMID:35447115\tIDA\t\tC\tCytoskeleton-associated protein 30 kDa\tTb11.50.0001\tmRNA\ttaxon:185431\t20220424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.720\tCAP30\t\tGO:0030863\tGO_REF:0000109\tIDA\t\tC\tCytoskeleton-associated protein 30 kDa\tTb11.50.0001\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0004674\tGO_REF:0000002\tISS\t\tF\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20040723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20040723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20040723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0035174\tGO_REF:0000002\tISS\t\tF\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20040723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7211\tTb927.11.7211\t\tGO:0003677\tGO_REF:0000002\tISS\tInterPro:IPR000330\tF\tSNF2 DNA repair protein, putative\tTb11.02.5060\tmRNA\ttaxon:185431\t20041001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7211\tTb927.11.7211\t\tGO:0005524\tGO_REF:0000002\tISS\tInterPro:IPR000330|InterPro:IPR001650\tF\tSNF2 DNA repair protein, putative\tTb11.02.5060\tmRNA\ttaxon:185431\t20041001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7211\tTb927.11.7211\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tSNF2 DNA repair protein, putative\tTb11.02.5060\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7211\tTb927.11.7211\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSNF2 DNA repair protein, putative\tTb11.02.5060\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7211\tTb927.11.7211\t\tGO:0006338\tGO_REF:0000002\tISS\tGB:AAF24984.1\tP\tSNF2 DNA repair protein, putative\tTb11.02.5060\tmRNA\ttaxon:185431\t20041001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7214\tmt-SAF13\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitoribosomal SSU assembly factor 13\tTb11.02.5100\tmRNA\ttaxon:185431\t20140127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7216\torc1\t\tGO:0000808\tGO_REF:0000002\tISS\tUniProt:O16810\tC\torigin recognition complex subunit 1 (ORC1), putative\tTb11.02.5110\tmRNA\ttaxon:185431\t20041206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7216\torc1\t\tGO:0003677\tGO_REF:0000002\tISS\tUniProt:O16810\tF\torigin recognition complex subunit 1 (ORC1), putative\tTb11.02.5110\tmRNA\ttaxon:185431\t20041206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7216\torc1\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\torigin recognition complex subunit 1 (ORC1), putative\tTb11.02.5110\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7216\torc1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\torigin recognition complex subunit 1 (ORC1), putative\tTb11.02.5110\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7216\torc1\t\tGO:0006260\tGO_REF:0000002\tISS\tUniProt:O16810\tP\torigin recognition complex subunit 1 (ORC1), putative\tTb11.02.5110\tmRNA\ttaxon:185431\t20041206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7216\torc1\t\tGO:0006270\tPMID:21799014\tIPI\tGeneDB:Tb927.2.3930\tP\torigin recognition complex subunit 1 (ORC1), putative\tTb11.02.5110\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7216\torc1\t\tGO:0044786\tPMID:21799014\tIPI\tGeneDB:Tb927.2.3930\tP\torigin recognition complex subunit 1 (ORC1), putative\tTb11.02.5110\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7218\tMERS2\t\tGO:0000963\tPMID:22396527\tIC\tGO:0048255|GO:0043631\tP\tmitochondrial edited mRNA stability factor 1 subunit\tTb11.02.5120\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7218\tMERS2\t\tGO:0003723\tPMID:18951088\tIDA\t\tF\tmitochondrial edited mRNA stability factor 1 subunit\tTb11.02.5120\tmRNA\ttaxon:185431\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7218\tMERS2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial edited mRNA stability factor 1 subunit\tTb11.02.5120\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7218\tMERS2\t\tGO:0005739\tPMID:17646387\tISM\t\tC\tmitochondrial edited mRNA stability factor 1 subunit\tTb11.02.5120\tmRNA\ttaxon:185431\t20170608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7218\tMERS2\t\tGO:0043631\tPMID:18951088\tIDA\t\tP\tmitochondrial edited mRNA stability factor 1 subunit\tTb11.02.5120\tmRNA\ttaxon:185431\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7218\tMERS2\t\tGO:0048255\tPMID:18951088\tIDA\t\tP\tmitochondrial edited mRNA stability factor 1 subunit\tTb11.02.5120\tmRNA\ttaxon:185431\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7220\tTb927.11.7220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tneurobeachin/beige protein, putative\tTb11.02.5130\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0006897\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7240\tDCR2\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcomponent of motile flagella 70 protein\tTb11.02.5150|CMF70\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7240\tDCR2\t\tGO:0005858\tPMID:20876659\tIPI\tGeneDB:Tb927.9.15050\tC\tcomponent of motile flagella 70 protein\tTb11.02.5150|CMF70\tmRNA\ttaxon:185431\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7240\tDCR2\t\tGO:0005929\tPMID:20876659\tIDA\t\tC\tcomponent of motile flagella 70 protein\tTb11.02.5150|CMF70\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7240\tDCR2\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tcomponent of motile flagella 70 protein\tTb11.02.5150|CMF70\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7240\tDCR2\t\tGO:0060285\tPMID:20876659\tIMP\t\tP\tcomponent of motile flagella 70 protein\tTb11.02.5150|CMF70\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7250\tTb927.11.7250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5160\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7250\tTb927.11.7250\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.02.5160\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7270\tPSB3\t\tGO:0004175\tPMID:9741626\tTAS\t\tF\tproteasome beta 3 subunit, putative\tTb11.02.5170\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7270\tPSB3\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tproteasome beta 3 subunit, putative\tTb11.02.5170\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7270\tPSB3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tproteasome beta 3 subunit, putative\tTb11.02.5170\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7270\tPSB3\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001353\tP\tproteasome beta 3 subunit, putative\tTb11.02.5170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7270\tPSB3\t\tGO:0019774\tPMID:7499235\tTAS\t\tC\tproteasome beta 3 subunit, putative\tTb11.02.5170\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7280\tRPB9\t\tGO:0003899\tGO_REF:0000011\tISM\tInterPro:IPR001529\tF\tDNA-direcetd RNA polymerase II, subunit 9, putative\tTb11.02.5180\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7280\tRPB9\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P36958\tC\tDNA-direcetd RNA polymerase II, subunit 9, putative\tTb11.02.5180\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7280\tRPB9\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA-direcetd RNA polymerase II, subunit 9, putative\tTb11.02.5180\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7280\tRPB9\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA-direcetd RNA polymerase II, subunit 9, putative\tTb11.02.5180\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7280\tRPB9\t\tGO:0006351\tGO_REF:0000011\tISM\tInterPro:IPR001529\tP\tDNA-direcetd RNA polymerase II, subunit 9, putative\tTb11.02.5180\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7290\tTb927.11.7290\t\tGO:0004594\tGO_REF:0000011\tISM\tInterPro:IPR004567\tF\tpantothenate kinase subunit, putative\tTb11.02.5190\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7290\tTb927.11.7290\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpantothenate kinase subunit, putative\tTb11.02.5190\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7290\tTb927.11.7290\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tpantothenate kinase subunit, putative\tTb11.02.5190\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7290\tTb927.11.7290\t\tGO:0015937\tGO_REF:0000011\tISM\tInterPro:IPR004567\tP\tpantothenate kinase subunit, putative\tTb11.02.5190\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7300\tTb927.11.7300\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR007114\tP\tmajor facilitator superfamily, putative\tTb11.02.5200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7300\tTb927.11.7300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmajor facilitator superfamily, putative\tTb11.02.5200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7310\tTb927.11.7310\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR000504\tF\tRNA binding protein, putative\tTb11.02.5210\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7310\tTb927.11.7310\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRNA binding protein, putative\tTb11.02.5210\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7320\tTb927.11.7320\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tdual specificity phopshatase, putative\tTb11.02.5220\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7320\tTb927.11.7320\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tdual specificity phopshatase, putative\tTb11.02.5220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7320\tTb927.11.7320\t\tGO:0008138\tGO_REF:0000011\tISM\tInterPro:IPR000340\tF\tdual specificity phopshatase, putative\tTb11.02.5220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7330\tTb927.11.7330\t\tGO:0005634\tPMID:23650088\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5230\tmRNA\ttaxon:185431\t20200409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7330\tTb927.11.7330\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5230\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7350\tH2BV\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000558\tF\tHistone H2B variant V\tTb11.02.5250\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7350\tH2BV\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tHistone H2B variant V\tTb11.02.5250\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7350\tH2BV\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000558\tC\tHistone H2B variant V\tTb11.02.5250\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7350\tH2BV\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tHistone H2B variant V\tTb11.02.5250\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7350\tH2BV\t\tGO:0006260\tPMID:10491117\tTAS\t\tP\tHistone H2B variant V\tTb11.02.5250\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7360\tTb927.11.7360\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 9, putative\tTb11.02.5260\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7360\tTb927.11.7360\t\tGO:0006897\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 9, putative\tTb11.02.5260\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7360\tTb927.11.7360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 9, putative\tTb11.02.5260\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7360\tTb927.11.7360\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 9, putative\tTb11.02.5260\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7380\tG3PDH\t\tGO:0004368\tPMID:16806528\tISO\tGeneDB:LmjF.28.0240\tF\tglycerol-3-phosphate dehydrogenase (FAD-dependent), mitochondrial\tTb11.02.5280\tmRNA\ttaxon:185431\t20170612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7380\tG3PDH\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tglycerol-3-phosphate dehydrogenase (FAD-dependent), mitochondrial\tTb11.02.5280\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7380\tG3PDH\t\tGO:0005739\tPMID:16806528\tEXP\t\tC\tglycerol-3-phosphate dehydrogenase (FAD-dependent), mitochondrial\tTb11.02.5280\tmRNA\ttaxon:185431\t20090520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7380\tG3PDH\t\tGO:0019563\tPMID:16806528\tRCA\t\tP\tglycerol-3-phosphate dehydrogenase (FAD-dependent), mitochondrial\tTb11.02.5280\tmRNA\ttaxon:185431\t20090520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7380\tG3PDH\t\tGO:0050660\tPMID:16806528\tIDA\t\tF\tglycerol-3-phosphate dehydrogenase (FAD-dependent), mitochondrial\tTb11.02.5280\tmRNA\ttaxon:185431\t20090520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7390\tTb927.11.7390\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH-ubiquinone oxidoreductase complex I, 21 kDa subunit, putative\tTb11.02.5290\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.740\tEIF5A\t\tGO:0003743\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00037\tF\teukaryotic translation initiation factor 5A\tTb11.03.0410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.740\tEIF5A\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:P23301\tC\teukaryotic translation initiation factor 5A\tTb11.03.0410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.740\tEIF5A\t\tGO:0005844\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506925.120\tC\teukaryotic translation initiation factor 5A\tTb11.03.0410\tmRNA\ttaxon:185431\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.740\tEIF5A\t\tGO:0006413\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00037\tP\teukaryotic translation initiation factor 5A\tTb11.03.0410\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7410\tTb927.11.7410\t\tGO:0004222\tGO_REF:0000011\tISM\tInterPro:IPR001577\tF\tMSP-A, putative\tTb11.02.5310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7410\tTb927.11.7410\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tMSP-A, putative\tTb11.02.5310\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7410\tTb927.11.7410\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tMSP-A, putative\tTb11.02.5310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7410\tTb927.11.7410\t\tGO:0007155\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tMSP-A, putative\tTb11.02.5310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7410\tTb927.11.7410\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001577\tC\tMSP-A, putative\tTb11.02.5310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7420\tTb927.11.7420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tphosphoadenosine phosphosulfate reductase-like protein\tTb11.02.5320\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7420\tTb927.11.7420\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002500\tP\tphosphoadenosine phosphosulfate reductase-like protein\tTb11.02.5320\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7420\tTb927.11.7420\t\tGO:0016740\tGO_REF:0000011\tISM\tInterPro:IPR002500\tF\tphosphoadenosine phosphosulfate reductase-like protein\tTb11.02.5320\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7420\tTb927.11.7420\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tphosphoadenosine phosphosulfate reductase-like protein\tTb11.02.5320\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7420\tTb927.11.7420\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tphosphoadenosine phosphosulfate reductase-like protein\tTb11.02.5320\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7430\tTb927.11.7430\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5330\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7430\tTb927.11.7430\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5330\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7450\tCMF71\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein family member, putative\tTb11.02.5350|ZC3H43\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7450\tCMF71\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tzinc finger protein family member, putative\tTb11.02.5350|ZC3H43\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7460\tBiP\t\tGO:0005783\tPMID:8227199\tIDA\t\tC\tglucose-regulated protein 78, putative\tGRP78A|Tb11.02.5450\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7460\tBiP\t\tGO:0005783\tPMID:20052285\tEXP\t\tC\tglucose-regulated protein 78, putative\tGRP78A|Tb11.02.5450\tmRNA\ttaxon:185431\t20100609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7460\tBiP\t\tGO:0006457\tPMID:8227199\tTAS\t\tP\tglucose-regulated protein 78, putative\tGRP78A|Tb11.02.5450\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7460\tBiP\t\tGO:0006614\tPMID:8227199\tTAS\t\tP\tglucose-regulated protein 78, putative\tGRP78A|Tb11.02.5450\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0008553\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tF\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tP\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0016471\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tC\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0035690\tPMID:26150481\tIMP\t\tP\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20151123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0035690\tPMID:26150481\tIMP\t\tP\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20151123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7490\tTb927.11.7490\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.02.5480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.750\tTb927.11.750\t\tGO:0000113\tGO_REF:0000012\tISA\tUniProtKB:P31244\tC\tDNA repair protein, putative\tTb11.03.0400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.750\tTb927.11.750\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA repair protein, putative\tTb11.03.0400\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.750\tTb927.11.750\t\tGO:0006281\tGO_REF:0000011\tISM\tInterPro:IPR000330\tP\tDNA repair protein, putative\tTb11.03.0400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.750\tTb927.11.750\t\tGO:0008094\tGO_REF:0000012\tISA\tUniProtKB:P31244\tF\tDNA repair protein, putative\tTb11.03.0400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.750\tTb927.11.750\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tDNA repair protein, putative\tTb11.03.0400\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.750\tTb927.11.750\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDNA repair protein, putative\tTb11.03.0400\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.750\tTb927.11.750\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tDNA repair protein, putative\tTb11.03.0400\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7500\tTb927.11.7500\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.02.5490\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7510\tBiP\t\tGO:0005783\tPMID:8227199\tIDA\t\tC\tglucose-regulated protein 78, putative\tGRP78B|Tb11.02.5500\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7510\tBiP\t\tGO:0005783\tPMID:20052285\tEXP\t\tC\tglucose-regulated protein 78, putative\tGRP78B|Tb11.02.5500\tmRNA\ttaxon:185431\t20100609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7510\tBiP\t\tGO:0006457\tPMID:8227199\tTAS\t\tP\tglucose-regulated protein 78, putative\tGRP78B|Tb11.02.5500\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7510\tBiP\t\tGO:0006614\tPMID:8227199\tTAS\t\tP\tglucose-regulated protein 78, putative\tGRP78B|Tb11.02.5500\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7520\tTb927.11.7520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5510\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7530\tTb927.11.7530\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR000873\tF\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.5520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7530\tTb927.11.7530\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.5520\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7530\tTb927.11.7530\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR000873\tP\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.5520\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7540\tTb927.11.7540\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P13804\tC\telectron-transfer-flavoprotein, alpha polypeptide, putative\tTb11.02.5530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7540\tTb927.11.7540\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\telectron-transfer-flavoprotein, alpha polypeptide, putative\tTb11.02.5530\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7540\tTb927.11.7540\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\telectron-transfer-flavoprotein, alpha polypeptide, putative\tTb11.02.5530\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7540\tTb927.11.7540\t\tGO:0009055\tGO_REF:0000011\tISM\tInterPro:IPR001308\tF\telectron-transfer-flavoprotein, alpha polypeptide, putative\tTb11.02.5530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7540\tTb927.11.7540\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\telectron-transfer-flavoprotein, alpha polypeptide, putative\tTb11.02.5530\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7540\tTb927.11.7540\t\tGO:0055114\tGO_REF:0000011\tISM\tInterPro:IPR001308\tP\telectron-transfer-flavoprotein, alpha polypeptide, putative\tTb11.02.5530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7550\tTb927.11.7550\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5540\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7550\tTb927.11.7550\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5540\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7550\tTb927.11.7550\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5540\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7560\tCMF15\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tpredicted WD40 repeat protein\tTb11.02.5550\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7560\tCMF15\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tpredicted WD40 repeat protein\tTb11.02.5550\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7570\tTb927.11.7570\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATP-grasp domain containing protein, putative\tTb11.02.5560\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7570\tTb927.11.7570\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tATP-grasp domain containing protein, putative\tTb11.02.5560\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7580\tTb927.11.7580\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5570\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7580\tTb927.11.7580\t\tGO:0020023\tPMID:29931198\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5570\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7580\tTb927.11.7580\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5570\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7590\tTAP110\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tTripartite attachment complex associated protein 110\tTb11.02.5580\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7590\tTAP110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTripartite attachment complex associated protein 110\tTb11.02.5580\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7590\tTAP110\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tTripartite attachment complex associated protein 110\tTb11.02.5580\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7590\tTAP110\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tTripartite attachment complex associated protein 110\tTb11.02.5580\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7590\tTAP110\t\tGO:0120121\tPMID:33589495\tIDA\t\tC\tTripartite attachment complex associated protein 110\tTb11.02.5580\tmRNA\ttaxon:185431\t20220303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0004722\tGO_REF:0000011\tISM\tInterPro:IPR000222\tF\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000222\tP\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0008287\tGO_REF:0000011\tISM\tInterPro:IPR000222\tC\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7600\tTb927.11.7600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5590\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7600\tTb927.11.7600\t\tGO:0005856\tPMID:25972344\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5590\tmRNA\ttaxon:185431\t20160913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7600\tTb927.11.7600\t\tGO:0005929\tPMID:25972344\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5590\tmRNA\ttaxon:185431\t20160913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7600\tTb927.11.7600\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5590\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7600\tTb927.11.7600\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5590\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0004222\tGO_REF:0000002\tISS\t\tF\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0006508\tGO_REF:0000002\tISS\t\tP\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0007155\tGO_REF:0000002\tISS\t\tP\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0008270\tGO_REF:0000002\tISS\t\tF\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0016020\tGO_REF:0000002\tISS\t\tC\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7670\tTb927.11.7670\t\tGO:0035869\tGO_REF:0000109\tIDA\t\tC\tCornifin (SPRR) family, putative\tTb11.v5.0045\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7680\tTb927.11.7680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.v5.0044\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7690\tTb927.11.7690\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.v5.0043\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7690\tTb927.11.7690\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.v5.0043\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7700\tTb927.11.7700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.v5.0042\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7702\tLSM5\t\tGO:0008380\tPMID:18433897\tIMP\t\tP\tU6 snRNA-associated Sm-like protein LSm5\tNCDS.Tb927.11.7702\tmRNA\ttaxon:185431\t20190813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7702\tLSM5\t\tGO:0017070\tPMID:18433897\tIMP\t\tF\tU6 snRNA-associated Sm-like protein LSm5\tNCDS.Tb927.11.7702\tmRNA\ttaxon:185431\t20190813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7740\tTb927.11.7740\t\tGO:0003777\tGO_REF:0000012\tISA\tUniProtKB:P11985\tF\tdynein light chain, putative\tTb11.02.5620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7740\tTb927.11.7740\t\tGO:0005875\tGO_REF:0000012\tISA\tUniProtKB:P11985\tC\tdynein light chain, putative\tTb11.02.5620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7740\tTb927.11.7740\t\tGO:0007017\tGO_REF:0000012\tISA\tUniProtKB:P11985\tP\tdynein light chain, putative\tTb11.02.5620\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7750\tTb927.11.7750\t\tGO:0004222\tGO_REF:0000011\tISM\tInterPro:IPR001577\tF\tMSP-A, putative\tTb11.02.5630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7750\tTb927.11.7750\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tMSP-A, putative\tTb11.02.5630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7750\tTb927.11.7750\t\tGO:0007155\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tMSP-A, putative\tTb11.02.5630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7750\tTb927.11.7750\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001577\tC\tMSP-A, putative\tTb11.02.5630\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7760\tTb927.11.7760\t\tGO:0004222\tGO_REF:0000011\tISM\tInterPro:IPR001577\tF\tMSP-A, putative\tTb11.02.5640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7760\tTb927.11.7760\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tMSP-A, putative\tTb11.02.5640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7760\tTb927.11.7760\t\tGO:0007155\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tMSP-A, putative\tTb11.02.5640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7760\tTb927.11.7760\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR006025\tF\tMSP-A, putative\tTb11.02.5640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7760\tTb927.11.7760\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001577\tC\tMSP-A, putative\tTb11.02.5640\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7770\tTb927.11.7770\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\toxidoreductase-like protein\tTb11.02.5650\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7770\tTb927.11.7770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\toxidoreductase-like protein\tTb11.02.5650\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7770\tTb927.11.7770\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00106\tP\toxidoreductase-like protein\tTb11.02.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7770\tTb927.11.7770\t\tGO:0016491\tGO_REF:0000011\tISM\tPfam:PF00106\tF\toxidoreductase-like protein\tTb11.02.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7780\tATOM46\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tPresent in the outer mitochondrial membrane proteome 16\tTb11.02.5660|POMP16\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7780\tATOM46\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 16\tTb11.02.5660|POMP16\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7780\tATOM46\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tPresent in the outer mitochondrial membrane proteome 16\tTb11.02.5660|POMP16\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7780\tATOM46\t\tGO:0005742\tPMID:25808593\tIPI\tGeneDB:Tb927.9.9660\tC\tPresent in the outer mitochondrial membrane proteome 16\tTb11.02.5660|POMP16\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7780\tATOM46\t\tGO:0006626\tPMID:25808593\tIDA\t\tP\tPresent in the outer mitochondrial membrane proteome 16\tTb11.02.5660|POMP16\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7780\tATOM46\t\tGO:0030150\tPMID:25808593\tIMP\t\tP\tPresent in the outer mitochondrial membrane proteome 16\tTb11.02.5660|POMP16\tmRNA\ttaxon:185431\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7790\tMRPS16\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial ribosomal protein S16\tbS16m|Tb11.02.5670\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7790\tMRPS16\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial ribosomal protein S16\tbS16m|Tb11.02.5670\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7790\tMRPS16\t\tGO:0005763\tPMID:18364347\tIDA\t\tC\tMitochondrial ribosomal protein S16\tbS16m|Tb11.02.5670\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.780\tTb927.11.780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0350\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.780\tTb927.11.780\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0350\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.780\tTb927.11.780\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0350\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7800\tTb927.11.7800\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5680\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7800\tTb927.11.7800\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.5680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7800\tTb927.11.7800\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5680\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7820\tTb927.11.7820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tendonuclease/exonuclease/phosphatase, putative\tTb11.02.5700\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7820\tTb927.11.7820\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tendonuclease/exonuclease/phosphatase, putative\tTb11.02.5700\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7830\tTb927.11.7830\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5710\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7840\tRNR1\t\tGO:0004748\tPMID:9192674\tIDA\t\tF\tribonucleoside-diphosphate reductase large chain\tTb11.02.5720\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7840\tRNR1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tribonucleoside-diphosphate reductase large chain\tTb11.02.5720\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7840\tRNR1\t\tGO:0005971\tPMID:9192674\tTAS\t\tC\tribonucleoside-diphosphate reductase large chain\tTb11.02.5720\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7840\tRNR1\t\tGO:0006260\tGO_REF:0000011\tISM\tInterPro:IPR000788\tP\tribonucleoside-diphosphate reductase large chain\tTb11.02.5720\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7850\tTb927.11.7850\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5725\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7850\tTb927.11.7850\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.02.5725\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7860\tMCM2\t\tGO:0003677\tPMID:21799014\tIMP\t\tF\tDNA replication licensing factor MCM2\tTb11.02.5730\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7860\tMCM2\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001208\tF\tDNA replication licensing factor MCM2\tTb11.02.5730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7860\tMCM2\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA replication licensing factor MCM2\tTb11.02.5730\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7860\tMCM2\t\tGO:0005634\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM2\tTb11.02.5730\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7860\tMCM2\t\tGO:0006270\tPMID:21799014\tIMP\t\tP\tDNA replication licensing factor MCM2\tTb11.02.5730\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7860\tMCM2\t\tGO:0006270\tGO_REF:0000012\tISA\tUniProtKB:P49739\tP\tDNA replication licensing factor MCM2\tTb11.02.5730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7860\tMCM2\t\tGO:0044786\tPMID:21799014\tIMP\t\tP\tDNA replication licensing factor MCM2\tTb11.02.5730\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7860\tMCM2\t\tGO:0071162\tPMID:21799014\tIDA\t\tC\tDNA replication licensing factor MCM2\tTb11.02.5730\tmRNA\ttaxon:185431\t20160912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7890\tZC3H44\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger CCCH domain containing protein 44\tTb11.02.5760\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7890\tZC3H44\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tzinc finger CCCH domain containing protein 44\tTb11.02.5760\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7890\tZC3H44\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tzinc finger CCCH domain containing protein 44\tTb11.02.5760\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.790\tTb927.11.790\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tAGC/RSK family serine/threonine kinase, putative\tTb11.03.0340\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.790\tTb927.11.790\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tAGC/RSK family serine/threonine kinase, putative\tTb11.03.0340\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.790\tTb927.11.790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tAGC/RSK family serine/threonine kinase, putative\tTb11.03.0340\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.790\tTb927.11.790\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\tAGC/RSK family serine/threonine kinase, putative\tTb11.03.0340\tmRNA\ttaxon:185431\t20161207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.790\tTb927.11.790\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAGC/RSK family serine/threonine kinase, putative\tTb11.03.0340\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7900\tRBP16\t\tGO:0003723\tPMID:10207031\tIDA\t\tF\tmitochondrial RNA binding protein 16\tTb11.02.5770\tmRNA\ttaxon:185431\t20140325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7900\tRBP16\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding protein 16\tTb11.02.5770\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7900\tRBP16\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding protein 16\tTb11.02.5770\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7900\tRBP16\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding protein 16\tTb11.02.5770\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7900\tRBP16\t\tGO:0005739\tPMID:10207031\tIDA\t\tC\tmitochondrial RNA binding protein 16\tTb11.02.5770\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7900\tRBP16\t\tGO:0009451\tPMID:10207031\tTAS\t\tP\tmitochondrial RNA binding protein 16\tTb11.02.5770\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7900\tRBP16\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tmitochondrial RNA binding protein 16\tTb11.02.5770\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7920\tTb927.11.7920\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\tTb11.02.5780\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7920\tTb927.11.7920\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tSUMO-interacting motif-containing protein\tTb11.02.5780\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7930\tRPB8\t\tGO:0003899\tGO_REF:0000012\tISA\tUniProtKB:P52434\tF\tRNA polymerase B subunit RPB8, putative\tTb11.02.5790\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7930\tRPB8\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tRNA polymerase B subunit RPB8, putative\tTb11.02.5790\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7930\tRPB8\t\tGO:0006351\tGO_REF:0000011\tISM\tInterPro:IPR005570\tP\tRNA polymerase B subunit RPB8, putative\tTb11.02.5790\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7940\tTb927.11.7940\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tcalmodulin, putative\tTb11.02.5800\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7940\tTb927.11.7940\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tcalmodulin, putative\tTb11.02.5800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7950\tTb927.11.7950\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkinetoplastid-specific dual specificity phosphatase, putative\tTb11.02.5810\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7950\tTb927.11.7950\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinetoplastid-specific dual specificity phosphatase, putative\tTb11.02.5810\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7950\tTb927.11.7950\t\tGO:0008138\tGO_REF:0000011\tISM\tInterPro:IPR000340\tF\tkinetoplastid-specific dual specificity phosphatase, putative\tTb11.02.5810\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7960\tKPAP1\t\tGO:0000963\tPMID:22396527\tIC\tGO:0031019\tP\tkinetoplast poly(A) polymerase 1\tTb11.02.5820|TUT5\tmRNA\ttaxon:185431\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7960\tKPAP1\t\tGO:0004652\tPMID:18464794\tEXP\t\tF\tkinetoplast poly(A) polymerase 1\tTb11.02.5820|TUT5\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7960\tKPAP1\t\tGO:0005739\tPMID:18464794\tEXP\t\tC\tkinetoplast poly(A) polymerase 1\tTb11.02.5820|TUT5\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7960\tKPAP1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tkinetoplast poly(A) polymerase 1\tTb11.02.5820|TUT5\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7960\tKPAP1\t\tGO:0006378\tPMID:18464794\tEXP\t\tP\tkinetoplast poly(A) polymerase 1\tTb11.02.5820|TUT5\tmRNA\ttaxon:185431\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7960\tKPAP1\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tkinetoplast poly(A) polymerase 1\tTb11.02.5820|TUT5\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.800\tTb927.11.800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tprefoldin subunit, putative\tTb11.03.0335\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8010\tTb927.11.8010\t\tGO:0000113\tGO_REF:0000012\tISA\tUniProtKB:P31244\tC\tDNA repair protein, putative\tTb11.01.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8010\tTb927.11.8010\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000330\tF\tDNA repair protein, putative\tTb11.01.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8010\tTb927.11.8010\t\tGO:0006281\tGO_REF:0000011\tISM\tInterPro:IPR000330\tP\tDNA repair protein, putative\tTb11.01.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8010\tTb927.11.8010\t\tGO:0008094\tGO_REF:0000012\tISA\tUniProtKB:P31244\tF\tDNA repair protein, putative\tTb11.01.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8020\tTb927.11.8020\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\thypothetical protein, conserved\tTb11.01.0520\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8020\tTb927.11.8020\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.01.0520\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8030\tTb927.11.8030\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0510\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8040\tTb927.11.8040\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.0500\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8040\tTb927.11.8040\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.0500\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8050\tTb927.11.8050\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSas10/Utp3/C1D family/Sas10 C-terminal domain containing protein, putative\tTb11.01.0490\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8060\tTb927.11.8060\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSNARE associated Golgi protein, putative\tTb11.01.0480\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8060\tTb927.11.8060\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tSNARE associated Golgi protein, putative\tTb11.01.0480\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8060\tTb927.11.8060\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSNARE associated Golgi protein, putative\tTb11.01.0480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8080\tTb927.11.8080\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tbtb/poz domain containing protein, putative\tTb11.01.0460\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8080\tTb927.11.8080\t\tGO:0005634\tPMID:29931198\tIDA\t\tC\tbtb/poz domain containing protein, putative\tTb11.01.0460\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8080\tTb927.11.8080\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tbtb/poz domain containing protein, putative\tTb11.01.0460\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8080\tTb927.11.8080\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tbtb/poz domain containing protein, putative\tTb11.01.0460\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8090\tTb927.11.8090\t\tGO:0004722\tGO_REF:0000024\tISS\t\tF\tprotein phosphatase 1, putative\tTb11.01.0450\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8090\tTb927.11.8090\t\tGO:0009987\tGO_REF:0000012\tISA\tUniProtKB:P37140\tP\tprotein phosphatase 1, putative\tTb11.01.0450\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8090\tTb927.11.8090\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:IPR006186\tF\tprotein phosphatase 1, putative\tTb11.01.0450\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8090\tTb927.11.8090\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 1, putative\tTb11.01.0450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8090\tTb927.11.8090\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tprotein phosphatase 1, putative\tTb11.01.0450\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.810\tTb927.11.810\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0330\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.810\tTb927.11.810\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\tTb11.03.0330\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8110\tTb927.11.8110\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0430\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8110\tTb927.11.8110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0430\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8110\tTb927.11.8110\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.0430\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8120\tTb927.11.8120\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tprotein transport protein SEC13, putative\tTb11.01.0420\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8120\tTb927.11.8120\t\tGO:0006886\tGO_REF:0000012\tISA\tUniProtKB:P55735\tP\tprotein transport protein SEC13, putative\tTb11.01.0420\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8130\tTb927.11.8130\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tATP synthase subunit H, putative\tTb11.01.0415\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8130\tTb927.11.8130\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tATP synthase subunit H, putative\tTb11.01.0415\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8130\tTb927.11.8130\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tATP synthase subunit H, putative\tTb11.01.0415\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8140\tTb927.11.8140\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tER lumen retaining receptor protein, putative\tTb11.01.0410\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8150\tTb927.11.8150\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tULK family pseudokinase, putative\tTb11.01.0400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8150\tTb927.11.8150\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tULK family pseudokinase, putative\tTb11.01.0400\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8150\tTb927.11.8150\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tULK family pseudokinase, putative\tTb11.01.0400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8160\tTb927.11.8160\t\tGO:0003777\tGO_REF:0000011\tISM\tInterPro:IPR004273\tF\tdynein heavy chain, putative\tTb11.01.0390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8160\tTb927.11.8160\t\tGO:0005929\tPMID:27519801\tIDA\t\tC\tdynein heavy chain, putative\tTb11.01.0390\tmRNA\ttaxon:185431\t20161207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8160\tTb927.11.8160\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tdynein heavy chain, putative\tTb11.01.0390\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8160\tTb927.11.8160\t\tGO:0007018\tGO_REF:0000011\tISM\tInterPro:IPR004273\tP\tdynein heavy chain, putative\tTb11.01.0390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8160\tTb927.11.8160\t\tGO:0030286\tGO_REF:0000011\tISM\tInterPro:IPR004273\tC\tdynein heavy chain, putative\tTb11.01.0390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8170\tMPK8\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tMitogen-activated protein kinase 8, putative\tTb11.01.0380\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8170\tMPK8\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tMitogen-activated protein kinase 8, putative\tTb11.01.0380\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8170\tMPK8\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tMitogen-activated protein kinase 8, putative\tTb11.01.0380\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0000724\tGO_REF:0000002\tISA\tUniProtKB:RAD51_HUMAN\tP\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0003690\tGO_REF:0000002\tISO\tGeneDB:LmjF.28.0550\tF\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0003697\tGO_REF:0000002\tISO\tGeneDB:LmjF.28.0550\tF\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0005634\tPMID:24267450\tIDA\t\tC\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20140305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0006310\tPMID:10557214\tIMP\t\tP\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0006974\tGO_REF:0000002\tISO\tGeneDB:LmjF.28.0550\tP\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0016887\tGO_REF:0000002\tISO\tGeneDB:LmjF.28.0550\tF\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0020033\tPMID:10557214\tIMP\t\tP\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20200127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0033676\tGO_REF:0000002\tISO\tGeneDB:LmjF.28.0550\tF\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0035861\tPMID:24267450\tIDA\t\tC\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20140305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0036297\tPMID:31082713\tIMP\t\tP\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20190711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0043142\tGO_REF:0000002\tISO\tGeneDB:LmjF.28.0550\tF\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.820\tTb927.11.820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.03.0320\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8200\tTb927.11.8200\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tribosomal protein S26, putative\tTb11.01.0355\tmRNA\ttaxon:185431\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8200\tTb927.11.8200\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000892\tF\tribosomal protein S26, putative\tTb11.01.0355\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8200\tTb927.11.8200\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000892\tC\tribosomal protein S26, putative\tTb11.01.0355\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8200\tTb927.11.8200\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000892\tP\tribosomal protein S26, putative\tTb11.01.0355\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8210\tTb927.11.8210\t\tGO:0003690\tGO_REF:0000012\tISA\tUniProtKB:P12753\tF\tRAD50 DNA repair-like protein\tTb11.01.0340\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8210\tTb927.11.8210\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tRAD50 DNA repair-like protein\tTb11.01.0340\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8210\tTb927.11.8210\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:P12753\tC\tRAD50 DNA repair-like protein\tTb11.01.0340\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8210\tTb927.11.8210\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tRAD50 DNA repair-like protein\tTb11.01.0340\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8210\tTb927.11.8210\t\tGO:0006303\tGO_REF:0000012\tISA\tUniProtKB:P12753\tP\tRAD50 DNA repair-like protein\tTb11.01.0340\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0000281\tPMID:16835447\tIMP\t\tP\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0004674\tPMID:16835447\tIDA\t\tF\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0005515\tPMID:18545648\tIPI\tGeneDB:Tb11.02.0400\tF\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0005634\tPMID:16436376\tIDA\t\tC\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0005819\tPMID:16436376\tIDA\t\tC\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0007059\tPMID:16835447\tIMP\t\tP\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0007088\tPMID:24453978\tIMP\t\tP\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0032133\tPMID:18545648\tIDA\t\tC\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20100127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0035175\tPMID:16835447\tIDA\t\tF\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20220408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0051225\tPMID:16835447\tIMP\t\tP\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20100126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8230\tTb927.11.8230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0320\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8230\tTb927.11.8230\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0320\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8250\tTb927.11.8250\t\tGO:0020022\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0300\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8270\tTb927.11.8270\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0280\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8280\tTb927.11.8280\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0270\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8290\tTb927.11.8290\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDIS3-like exonuclease, putative\tTb11.01.0260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.830\tTb927.11.830\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.03.0310\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.830\tTb927.11.830\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0310\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8300\tTb927.11.8300\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0250\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8310\tCITFA-4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tclass I transcription factor A, subunit 4\tTb11.01.0240\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8310\tCITFA-4\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tclass I transcription factor A, subunit 4\tTb11.01.0240\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8330\tTb927.11.8330\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0220\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8330\tTb927.11.8330\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR007087\tF\thypothetical protein, conserved\tTb11.01.0220\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8340\tTb927.11.8340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.0210\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8340\tTb927.11.8340\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.0210\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8340\tTb927.11.8340\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.0210\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.835\tTER\t\tGO:0000723\tPMID:23523918\tIMP\t\tP\ttelomerase RNA component\t\tsnoRNA\ttaxon:185431\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.835\tTER\t\tGO:0003721\tPMID:23523918\tIMP\t\tF\ttelomerase RNA component\t\tsnoRNA\ttaxon:185431\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.835\tTER\t\tGO:0005515\tPMID:23523918\tIPI\tGeneDB:Tb927.11.10190\tF\ttelomerase RNA component\t\tsnoRNA\ttaxon:185431\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.835\tTER\t\tGO:0005634\tPMID:23523918\tIDA\t\tC\ttelomerase RNA component\t\tsnoRNA\ttaxon:185431\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.835\tTER\t\tGO:0006278\tPMID:23523918\tIMP\t\tP\ttelomerase RNA component\t\tsnoRNA\ttaxon:185431\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0000910\tPMID:30171070\tIMP\t\tP\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20180907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003959\tF\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0008352\tGO_REF:0000012\tISA\tUniProtKB:Q9NHF1_DROME\tC\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0016197\tGO_REF:0000012\tISA\tUniProtKB:VPS4B_MOUSE\tP\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0120119\tPMID:30171070\tIDA\t\tC\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8360\tTb927.11.8360\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.0190\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8360\tTb927.11.8360\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.0190\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8360\tTb927.11.8360\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.0190\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8370\tNuSAP1\t\tGO:0005634\tPMID:29931198\tIDA\t\tC\tNucleus and spindle associated protein 1\tTb11.01.0180\tmRNA\ttaxon:185431\t20180626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8370\tNuSAP1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleus and spindle associated protein 1\tTb11.01.0180\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8370\tNuSAP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNucleus and spindle associated protein 1\tTb11.01.0180\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8370\tNuSAP1\t\tGO:0005819\tPMID:29931198\tIDA\t\tC\tNucleus and spindle associated protein 1\tTb11.01.0180\tmRNA\ttaxon:185431\t20180626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8380\tCPR\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tNADPH--cytochrome P450 reductase, putative\tTb11.01.0170\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8380\tCPR\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNADPH--cytochrome P450 reductase, putative\tTb11.01.0170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8380\tCPR\t\tGO:0016491\tGO_REF:0000011\tISM\tInterPro:IPR003097\tF\tNADPH--cytochrome P450 reductase, putative\tTb11.01.0170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8380\tCPR\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADPH--cytochrome P450 reductase, putative\tTb11.01.0170\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.840\tFTP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsodium/hydrogen exchanger, putative\tTb11.03.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.840\tFTP\t\tGO:0005929\tPMID:25503798\tIDA\t\tC\tsodium/hydrogen exchanger, putative\tTb11.03.0300\tmRNA\ttaxon:185431\t20150218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.840\tFTP\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tsodium/hydrogen exchanger, putative\tTb11.03.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.840\tFTP\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\tsodium/hydrogen exchanger, putative\tTb11.03.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.840\tFTP\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsodium/hydrogen exchanger, putative\tTb11.03.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.840\tFTP\t\tGO:0005929\tPMID:25503798\tIDA\t\tC\tsodium/hydrogen exchanger, putative\tTb11.03.0300\tmRNA\ttaxon:185431\t20150218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.840\tFTP\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tsodium/hydrogen exchanger, putative\tTb11.03.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.840\tFTP\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\tsodium/hydrogen exchanger, putative\tTb11.03.0300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8400\tmRPN1\t\tGO:0000287\tPMID:21810935\tIDA\t\tF\tMitochondrial RNA processing endonuclease 1 (mRPN1)\tTb11.01.0150\tmRNA\ttaxon:185431\t20110830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8400\tmRPN1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial RNA processing endonuclease 1 (mRPN1)\tTb11.01.0150\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8400\tmRPN1\t\tGO:0005739\tPMID:21810935\tIDA\t\tC\tMitochondrial RNA processing endonuclease 1 (mRPN1)\tTb11.01.0150\tmRNA\ttaxon:185431\t20120410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8400\tmRPN1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial RNA processing endonuclease 1 (mRPN1)\tTb11.01.0150\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8410\tTb927.11.8410\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0140\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8420\tJ55\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDnaJ domain containing protein, putative\tTb11.01.0135\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8450\tTb927.11.8450\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tAmastin surface glycoprotein, putative\tTb11.01.0110\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8470\tZC3H45\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\tzinc finger protein family member, putative\tTb11.01.0090\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8480\tTb927.11.8480\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tDNA polymerase kappa, putative\tTb11.01.0080\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8480\tTb927.11.8480\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA polymerase kappa, putative\tTb11.01.0080\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8480\tTb927.11.8480\t\tGO:0006281\tGO_REF:0000011\tISM\tInterPro:IPR001126\tP\tDNA polymerase kappa, putative\tTb11.01.0080\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.850\tTb927.11.850\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tAtypical serine/threonine protein kinase BUD32, putative\tTb11.03.0290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.850\tTb927.11.850\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tAtypical serine/threonine protein kinase BUD32, putative\tTb11.03.0290\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.850\tTb927.11.850\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tAtypical serine/threonine protein kinase BUD32, putative\tTb11.03.0290\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.850\tTb927.11.850\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAtypical serine/threonine protein kinase BUD32, putative\tTb11.03.0290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8520\tTb927.11.8520\t\tGO:0006281\tGO_REF:0000011\tISM\tInterPro:IPR001126\tP\tDNA polymerase kappa, putative\tTb11.01.0030|Tb11.12.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8530\tTb927.11.8530\t\tGO:0006281\tGO_REF:0000002\tISM\tInterPro:IPR001126\tP\tDNA polymerase kappa, putative\tTb11.01.0040\tmRNA\ttaxon:185431\t20131001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8580\tTb927.11.8580\t\tGO:0006281\tGO_REF:0000002\tISM\tInterPro:IPR001126\tP\tDNA polymerase kappa, putative\tTb11.01.0050|Tb927.11.8570|Tb11.12.0002\tmRNA\ttaxon:185431\t20131001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.860\tTb927.11.860\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tleucine-rich repeat protein (LRRP), putative\tTb11.03.0280\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.860\tTb927.11.860\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tleucine-rich repeat protein (LRRP), putative\tTb11.03.0280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8680\tTb927.11.8680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA polymerase kappa, putative\tTb11.12.0003|Tb927.11.8610|Tb11.01.0060|Tb927.11.8620\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8680\tTb927.11.8680\t\tGO:0006281\tGO_REF:0000002\tISM\tInterPro:IPR001126\tP\tDNA polymerase kappa, putative\tTb11.12.0003|Tb927.11.8610|Tb11.01.0060|Tb927.11.8620\tmRNA\ttaxon:185431\t20131001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.870\tMRPL23\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial ribosomal protein l23\tTb11.03.0260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.870\tMRPL23\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial ribosomal protein l23\tTb11.03.0260\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.870\tMRPL23\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tmitochondrial ribosomal protein l23\tTb11.03.0260\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8700\tTb927.11.8700\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.12.0004|Tb11.01.0070\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8700\tTb927.11.8700\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.12.0004|Tb11.01.0070\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8720\tTb927.11.8720\t\tGO:0004222\tGO_REF:0000011\tISM\tInterPro:IPR001577\tF\tmajor surface protease gp63, putative\tTb11.12.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8720\tTb927.11.8720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmajor surface protease gp63, putative\tTb11.12.0006\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8720\tTb927.11.8720\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tmajor surface protease gp63, putative\tTb11.12.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8720\tTb927.11.8720\t\tGO:0007155\tGO_REF:0000011\tISM\tInterPro:IPR001577\tP\tmajor surface protease gp63, putative\tTb11.12.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8720\tTb927.11.8720\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR001577\tC\tmajor surface protease gp63, putative\tTb11.12.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8720\tTb927.11.8720\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tmajor surface protease gp63, putative\tTb11.12.0006\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8720\tTb927.11.8720\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tmajor surface protease gp63, putative\tTb11.12.0006\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8730\tTb927.11.8730\t\tGO:0000160\tGO_REF:0000011\tISM\tInterPro:IPR002078\tP\tCell division control protein 48, putative\tTb11.12.0007\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8730\tTb927.11.8730\t\tGO:0006355\tGO_REF:0000011\tISM\tInterPro:IPR002078\tP\tCell division control protein 48, putative\tTb11.12.0007\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8730\tTb927.11.8730\t\tGO:0016887\tGO_REF:0000011\tISM\tPfam:PF00004\tF\tCell division control protein 48, putative\tTb11.12.0007\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8740\tTb927.11.8740\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF423), putative\tTb11.12.0008\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8740\tTb927.11.8740\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.12.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0000462\tPMID:16687655\tISS\tUniProtKB:FAL1_YEAST\tP\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0005634\tPMID:16687655\tIDA\t\tC\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20171121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0005730\tPMID:16687655\tISS\tUniProtKB:FAL1_YEAST\tC\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8780\tTb927.11.8780\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.12.0012\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8790\tTb927.11.8790\t\tGO:0005484\tGO_REF:0000012\tISA\tUniProtKB:Q8VZU2\tF\ttarget SNARE, putative\tTb11.12.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8790\tTb927.11.8790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttarget SNARE, putative\tTb11.12.0013\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8790\tTb927.11.8790\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttarget SNARE, putative\tTb11.12.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8790\tTb927.11.8790\t\tGO:0061025\tGO_REF:0000012\tISA\tUniProtKB:Q9SWH4\tP\ttarget SNARE, putative\tTb11.12.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.880\tCYPA\t\tGO:0003755\tGO_REF:0000012\tISA\tUniProtKB:CYP3_CAEEL\tF\tcyclophilin type peptidyl-prolyl cis-trans isomerase\tTb11.03.0250\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.880\tCYPA\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcyclophilin type peptidyl-prolyl cis-trans isomerase\tTb11.03.0250\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.880\tCYPA\t\tGO:0005829\tPMID:12062813\tIDA\t\tC\tcyclophilin type peptidyl-prolyl cis-trans isomerase\tTb11.03.0250\tmRNA\ttaxon:185431\t20141203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.880\tCYPA\t\tGO:0005929\tPMID:12062813\tIDA\t\tC\tcyclophilin type peptidyl-prolyl cis-trans isomerase\tTb11.03.0250\tmRNA\ttaxon:185431\t20141203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.880\tCYPA\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR002130\tP\tcyclophilin type peptidyl-prolyl cis-trans isomerase\tTb11.03.0250\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.880\tCYPA\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tcyclophilin type peptidyl-prolyl cis-trans isomerase\tTb11.03.0250\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.880\tCYPA\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tcyclophilin type peptidyl-prolyl cis-trans isomerase\tTb11.03.0250\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8800\tTb927.11.8800\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.12.0014\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8800\tTb927.11.8800\t\tGO:0005739\tPMID:19834910\tIDA\t\tC\thypothetical protein, conserved\tTb11.12.0014\tmRNA\ttaxon:185431\t20200408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8800\tTb927.11.8800\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.12.0014\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8800\tTb927.11.8800\t\tGO:0005743\tPMID:19834910\tHDA\t\tC\thypothetical protein, conserved\tTb11.12.0014\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8810\tTb927.11.8810\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.12.0015\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8820\tTb927.11.8820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglutathionylspermidine synthetase, putative\tTb11.12.0016\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8820\tTb927.11.8820\t\tGO:0006576\tGO_REF:0000012\tISA\tUniProtKB:P90518\tP\tglutathionylspermidine synthetase, putative\tTb11.12.0016\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8820\tTb927.11.8820\t\tGO:0008885\tGO_REF:0000012\tISA\tUniProtKB:P90518\tF\tglutathionylspermidine synthetase, putative\tTb11.12.0016\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8820\tTb927.11.8820\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglutathionylspermidine synthetase, putative\tTb11.12.0016\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8830\tESP2\tNOT\tGO:0009986\tPMID:25931509\tIDA\t\tC\tEnriched in surface-labeled proteome protein 2\tTb11.12.0017\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8840\tTb927.11.8840\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.12.0018\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8850\tTb927.11.8850\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUncharacterised protein family (UPF0220), putative\tTb11.01.0590\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8850\tTb927.11.8850\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tUncharacterised protein family (UPF0220), putative\tTb11.01.0590\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8850\tTb927.11.8850\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tUncharacterised protein family (UPF0220), putative\tTb11.01.0590\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8860\tCEP76\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tCEP76 C2 domain containing protein, putative\tTb11.01.0600\tmRNA\ttaxon:185431\t20170105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8860\tCEP76\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tCEP76 C2 domain containing protein, putative\tTb11.01.0600\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0003724\tPMID:9271369\tIMP\t\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0004004\tPMID:21321231\tIDA\t\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20160927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0005524\tPMID:21321231\tIMP\t\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20160927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0005739\tPMID:9271369\tIDA\t\tC\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0005739\tPMID:21321231\tIDA\t\tC\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20160927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0016556\tPMID:9271369\tIMP\t\tP\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8880\tTb927.11.8880\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family, putative\tTb11.01.0620\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8880\tTb927.11.8880\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\ttRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family, putative\tTb11.01.0620\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8880\tTb927.11.8880\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\ttRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family, putative\tTb11.01.0620\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8890\tRPC19\t\tGO:0003899\tGO_REF:0000011\tISM\tPfam:PF01193\tF\tDNA-dependent RNA polymerases, putative\tTb11.01.0625\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8890\tRPC19\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tDNA-dependent RNA polymerases, putative\tTb11.01.0625\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8890\tRPC19\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:Q09177\tC\tDNA-dependent RNA polymerases, putative\tTb11.01.0625\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8890\tRPC19\t\tGO:0006351\tGO_REF:0000011\tISM\tPfam:PF01193\tP\tDNA-dependent RNA polymerases, putative\tTb11.01.0625\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8890\tRPC19\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDNA-dependent RNA polymerases, putative\tTb11.01.0625\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.890\tTb927.11.890\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0240\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.890\tTb927.11.890\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0240\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8900\tTb927.11.8900\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDPCD protein family, putative\tTb11.01.0630\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0003954\tPMID:18534909\tISS\t\tF\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0006735\tPMID:18534909\tISS\t\tP\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0008137\tPMID:18534909\tISS\t\tF\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0030964\tPMID:18534909\tISS\t\tC\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0031966\tPMID:18534909\tTAS\t\tC\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20090505\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8920\tCEP120B\t\tGO:0036064\tPMID:28049148\tIDA\t\tC\tCentrosomal protein of 120 kDa, putative\tTb11.01.0650\tmRNA\ttaxon:185431\t20170105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8920\tCEP120B\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tCentrosomal protein of 120 kDa, putative\tTb11.01.0650\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8930\tTb927.11.8930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tD123, putative\tTb11.01.0660\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0004674\tGO_REF:0000002\tIDA\t\tF\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0005811\tPMID:20833891\tIDA\t\tC\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0005811\tPMID:30550896\tHDA\t\tC\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0006468\tPMID:20833891\tIDA\t\tP\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0016021\tPMID:20833891\tIDA\t\tC\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0034389\tPMID:20833891\tIMP\t\tP\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0046777\tPMID:20833891\tIDA\t\tP\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0055088\tPMID:20833891\tIMP\t\tP\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8950\tLRRP1\t\tGO:0005515\tPMID:25217630\tIPI\tGeneDB:Tb927.3.1120\tF\tleucine rich repeat\tTb11.01.0680\tmRNA\ttaxon:185431\t20170914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8950\tLRRP1\t\tGO:0120120\tPMID:30550896\tHDA\t\tC\tleucine rich repeat\tTb11.01.0680\tmRNA\ttaxon:185431\t20190501\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8960\tTb927.11.8960\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0690\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8970\tTb927.11.8970\t\tGO:0004751\tPMID:16981853\tISO\tGeneDB:TcCLB.509199.24\tF\tribose 5-phosphate isomerase, putative\tTb11.01.0700\tmRNA\ttaxon:185431\t20120720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8970\tTb927.11.8970\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tribose 5-phosphate isomerase, putative\tTb11.01.0700\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8970\tTb927.11.8970\t\tGO:0009052\tPMID:16981853\tISO\tGeneDB:TcCLB.509199.24\tP\tribose 5-phosphate isomerase, putative\tTb11.01.0700\tmRNA\ttaxon:185431\t20120720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8970\tTb927.11.8970\t\tGO:0020015\tPMID:18242729\tIDA\t\tC\tribose 5-phosphate isomerase, putative\tTb11.01.0700\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8980\tEF-G2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tElongation factor G 2, mitochondrial, putative\tTb11.01.0710\tmRNA\ttaxon:185431\t20140127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8990\tTb927.11.8990\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tcation transporter, putative\tTb11.01.0720\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8990\tTb927.11.8990\t\tGO:0031966\tPMID:19834910\tRCA\t\tC\tcation transporter, putative\tTb11.01.0720\tmRNA\ttaxon:185431\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.900\tIDH\t\tGO:0004450\tGO_REF:0000012\tISA\tUniProtKB:O75874\tF\tisocitrate dehydrogenase, putative\tTb11.03.0230\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.900\tIDH\t\tGO:0006102\tGO_REF:0000012\tISA\tUniProtKB:O75874\tP\tisocitrate dehydrogenase, putative\tTb11.03.0230\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.900\tIDH\t\tGO:0020015\tGO_REF:0000109\tIDA\t\tC\tisocitrate dehydrogenase, putative\tTb11.03.0230\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.900\tIDH\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tisocitrate dehydrogenase, putative\tTb11.03.0230\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9000\tTb927.11.9000\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcation transporter, putative\tTb11.01.0725\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9000\tTb927.11.9000\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR003689\tC\tcation transporter, putative\tTb11.01.0725\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9000\tTb927.11.9000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0725\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9000\tTb927.11.9000\t\tGO:0030001\tGO_REF:0000011\tISM\tInterPro:IPR003689\tP\tcation transporter, putative\tTb11.01.0725\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9000\tTb927.11.9000\t\tGO:0046873\tGO_REF:0000011\tISM\tInterPro:IPR003689\tF\tcation transporter, putative\tTb11.01.0725\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9010\tTb927.11.9010\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR003689\tC\tcation transporter, putative\tTb11.01.0730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9010\tTb927.11.9010\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9010\tTb927.11.9010\t\tGO:0030001\tGO_REF:0000011\tISM\tInterPro:IPR003689\tP\tcation transporter, putative\tTb11.01.0730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9010\tTb927.11.9010\t\tGO:0046873\tGO_REF:0000011\tISM\tInterPro:IPR003689\tF\tcation transporter, putative\tTb11.01.0730\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9020\tTb927.11.9020\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcation transporter, putative\tTb11.01.0760\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9020\tTb927.11.9020\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR003689\tC\tcation transporter, putative\tTb11.01.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9020\tTb927.11.9020\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9020\tTb927.11.9020\t\tGO:0030001\tGO_REF:0000011\tISM\tInterPro:IPR003689\tP\tcation transporter, putative\tTb11.01.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9020\tTb927.11.9020\t\tGO:0046873\tGO_REF:0000011\tISM\tInterPro:IPR003689\tF\tcation transporter, putative\tTb11.01.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9030\tTb927.11.9030\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcation transporter, putative\tTb11.01.0770\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9030\tTb927.11.9030\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR003689\tC\tcation transporter, putative\tTb11.01.0770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9030\tTb927.11.9030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9030\tTb927.11.9030\t\tGO:0030001\tGO_REF:0000011\tISM\tInterPro:IPR003689\tP\tcation transporter, putative\tTb11.01.0770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9030\tTb927.11.9030\t\tGO:0046873\tGO_REF:0000011\tISM\tInterPro:IPR003689\tF\tcation transporter, putative\tTb11.01.0770\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9050\tTb927.11.9050\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tp21-C-terminal region-binding protein, putative\tTb11.01.0790\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9050\tTb927.11.9050\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tp21-C-terminal region-binding protein, putative\tTb11.01.0790\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9060\tJ72\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDnaJ domain containing protein, putative\tTb11.01.0800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9060\tJ72\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDnaJ domain containing protein, putative\tTb11.01.0800\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0006897\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0016746\tPMID:19240115\tISM\tInterPro:IPR001594\tF\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9080\tNOP136\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleolar protein 136\tTb11.01.0820\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9080\tNOP136\t\tGO:0005730\tPMID:29931198\tIDA\t\tC\tNucleolar protein 136\tTb11.01.0820\tmRNA\ttaxon:185431\t20180625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9080\tNOP136\t\tGO:0005819\tPMID:29931198\tIDA\t\tC\tNucleolar protein 136\tTb11.01.0820\tmRNA\ttaxon:185431\t20190111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9090\tTb927.11.9090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tPutative methyltransferase, putative\tTb11.01.0830\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.910\tTb927.11.910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0210\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9100\tTb927.11.9100\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tDomain of unknown function (DUF4586), putative\tTb11.01.0840\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9110\tTb927.11.9110\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tC-terminal motor kinesin, putative\tTb11.01.0850\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9110\tTb927.11.9110\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tC-terminal motor kinesin, putative\tTb11.01.0850\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9110\tTb927.11.9110\t\tGO:0005871\tPMID:16481395\tEXP\t\tC\tC-terminal motor kinesin, putative\tTb11.01.0850\tmRNA\ttaxon:185431\t20110420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9120\tTb927.11.9120\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSNF2 family N-terminal domain/Ring finger domain containing protein, putative\tTb11.01.0860\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9120\tTb927.11.9120\t\tGO:0008270\tGO_REF:0000011\tISM\tInterPro:IPR001841\tF\tSNF2 family N-terminal domain/Ring finger domain containing protein, putative\tTb11.01.0860\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9130\tRPA1\t\tGO:0000784\tGO_REF:0000024\tISO\tUniProtKB:Q5MY89\tC\tReplication factor A protein 1\tTb11.01.0870\tmRNA\ttaxon:185431\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9130\tRPA1\t\tGO:0003684\tGO_REF:0000024\tISO\tGeneDB:LmjF.28.1820\tF\tReplication factor A protein 1\tTb11.01.0870\tmRNA\ttaxon:185431\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9130\tRPA1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tReplication factor A protein 1\tTb11.01.0870\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9130\tRPA1\t\tGO:0006974\tGO_REF:0000024\tISO\tUniProtKB:Q5MY89\tP\tReplication factor A protein 1\tTb11.01.0870\tmRNA\ttaxon:185431\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9130\tRPA1\t\tGO:0034399\tGO_REF:0000024\tISO\tGeneDB:LmjF.28.1820\tC\tReplication factor A protein 1\tTb11.01.0870\tmRNA\ttaxon:185431\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10130\tP\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0003723\tPMID:22396527\tIDA\t\tF\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0016554\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10130\tC\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9140\tGRBC7\t\tGO:0048255\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tTb11.01.0880|MRB0880\tmRNA\ttaxon:185431\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9150\tMPSS1\t\tGO:0000963\tPMID:26833087\tIMP\t\tP\tMitochondrial processome subunit 1\tTb11.01.0890\tmRNA\ttaxon:185431\t20190104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9150\tMPSS1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tMitochondrial processome subunit 1\tTb11.01.0890\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9150\tMPSS1\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tMitochondrial processome subunit 1\tTb11.01.0890\tmRNA\ttaxon:185431\t20140127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9150\tMPSS1\t\tGO:0020023\tPMID:29931198\tIDA\t\tC\tMitochondrial processome subunit 1\tTb11.01.0890\tmRNA\ttaxon:185431\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9160\tTb927.11.9160\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003959\tF\tATPase-like protein, putative\tTb11.01.0900\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9170\tTb927.11.9170\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000380\tF\tDNA topoisomerase III, putative\tTb11.01.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9170\tTb927.11.9170\t\tGO:0003917\tGO_REF:0000011\tISM\tInterPro:IPR000380\tF\tDNA topoisomerase III, putative\tTb11.01.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9170\tTb927.11.9170\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA topoisomerase III, putative\tTb11.01.0910\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9170\tTb927.11.9170\t\tGO:0006265\tGO_REF:0000011\tISM\tInterPro:IPR000380\tP\tDNA topoisomerase III, putative\tTb11.01.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9170\tTb927.11.9170\t\tGO:0006268\tGO_REF:0000011\tISM\tInterPro:IPR000380\tP\tDNA topoisomerase III, putative\tTb11.01.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9170\tTb927.11.9170\t\tGO:0006304\tGO_REF:0000011\tISM\tInterPro:IPR006171\tP\tDNA topoisomerase III, putative\tTb11.01.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9180\tCnt-b5\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001164\tF\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.0920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9180\tCnt-b5\t\tGO:0005096\tGO_REF:0000012\tISA\tUniProtKB:P40529\tF\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.0920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9180\tCnt-b5\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR001164\tC\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.0920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9180\tCnt-b5\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.0920\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9180\tCnt-b5\t\tGO:0006888\tGO_REF:0000012\tISA\tUniProtKB:P40529\tP\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.0920\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9180\tCnt-b5\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.0920\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0000902\tPMID:29155083\tIMP\t\tP\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20180903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0006886\tPMID:29155083\tIMP\t\tP\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20180903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0006897\tPMID:29155083\tIMP\t\tP\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20180903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0016303\tPMID:29155083\tIMP\t\tF\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20180903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0051301\tPMID:29155083\tIMP\t\tP\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20180903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0060285\tPMID:29155083\tIMP\t\tP\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20180903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.920\tTb927.11.920\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9200\tTb927.11.9200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmethyltransferase domain containing protein, putative\tTb11.01.0940\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9200\tTb927.11.9200\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tmethyltransferase domain containing protein, putative\tTb11.01.0940\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9210\tTb927.11.9210\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNOL1/NOP2/sun family, putative\tTb11.01.0950\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9210\tTb927.11.9210\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tNOL1/NOP2/sun family, putative\tTb11.01.0950\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9210\tTb927.11.9210\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tNOL1/NOP2/sun family, putative\tTb11.01.0950\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0004175\tPMID:11854272|PMID:12213827\tISS\t\tF\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0005634\tGO_REF:0000109\tIDA\t\tC\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0005838\tPMID:11854272|PMID:12213827\tISS\t\tC\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0043161\tPMID:11854272|PMID:12213827\tISS\t\tP\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9230\tTb927.11.9230\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0970\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9240\tTb927.11.9240\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.0980\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9250\tTb927.11.9250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1000\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9260\tTb927.11.9260\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1020\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:0005737\tPMID:11454198\tIDA\t\tC\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:0016301\tPMID:11454198\tIDA\t\tF\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:0044131\tPMID:11454198\tIMP\t\tP\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:0045926\tPMID:11454198\tIMP\t\tP\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:2000134\tPMID:11454198\tIMP\t\tP\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9280\tTb927.11.9280\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1040\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9280\tTb927.11.9280\t\tGO:0005739\tPMID:15223320\tISM\t\tC\thypothetical protein, conserved\tTb11.01.1040\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9280\tTb927.11.9280\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.1040\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9280\tTb927.11.9280\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1040\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9290\tFAZ20\t\tGO:0005929\tPMID:27226595\tIDA\t\tC\tPseudokinase, putative\tTb11.01.1050\tmRNA\ttaxon:185431\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9290\tFAZ20\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tPseudokinase, putative\tTb11.01.1050\tmRNA\ttaxon:185431\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9290\tFAZ20\t\tGO:0051286\tGO_REF:0000109\tIDA\t\tC\tPseudokinase, putative\tTb11.01.1050\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9290\tFAZ20\t\tGO:0120119\tPMID:27226595\tIDA\t\tC\tPseudokinase, putative\tTb11.01.1050\tmRNA\ttaxon:185431\t20190109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.930\tTb927.11.930\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0190\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.930\tTb927.11.930\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0190\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9300\tTb927.11.9300\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF3342), putative\tTb11.01.1070\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9310\tTb927.11.9310\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\ttRNA pseudouridine synthase, putative\tTb11.01.1080\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9310\tTb927.11.9310\t\tGO:0008033\tGO_REF:0000011\tISM\tPfam:PF01142\tP\ttRNA pseudouridine synthase, putative\tTb11.01.1080\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9310\tTb927.11.9310\t\tGO:0009982\tGO_REF:0000011\tISM\tPfam:PF01142\tF\ttRNA pseudouridine synthase, putative\tTb11.01.1080\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9320\tTb927.11.9320\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1090\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9330\tTb927.11.9330\t\tGO:0003678\tGO_REF:0000011\tISM\tInterPro:IPR010614\tF\thelicase-like protein\tTb11.01.1100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9330\tTb927.11.9330\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thelicase-like protein\tTb11.01.1100\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9330\tTb927.11.9330\t\tGO:0006281\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00604\tP\thelicase-like protein\tTb11.01.1100\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9340\tTb927.11.9340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGalactose oxidase, central domain containing protein, putative\tTb11.01.1110\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9340\tTb927.11.9340\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tGalactose oxidase, central domain containing protein, putative\tTb11.01.1110\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9350\tTb927.11.9350\t\tGO:0016831\tGO_REF:0000012\tISA\tUniProtKB:O86938\tF\tphosphonopyruvate decarboxylase-like protein, putative\tTb11.01.1120\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0006744\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01474\tP\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0008412\tGO_REF:0000024\tISS\t\tF\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9370\tTb927.11.9370\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1140\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9380\tTb927.11.9380\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.1150\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9380\tTb927.11.9380\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.1150\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9380\tTb927.11.9380\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\tTb11.01.1150\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9390\tTb927.11.9390\t\tGO:0003824\tGO_REF:0000011\tISM\tInterPro:IPR004143\tF\tOctanoyltransferase, putative\tTb11.01.1160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9390\tTb927.11.9390\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tOctanoyltransferase, putative\tTb11.01.1160\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9390\tTb927.11.9390\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tOctanoyltransferase, putative\tTb11.01.1160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9390\tTb927.11.9390\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tOctanoyltransferase, putative\tTb11.01.1160\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9390\tTb927.11.9390\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004143\tP\tOctanoyltransferase, putative\tTb11.01.1160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.940\tKREPB5\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tKREPB5\tTb11.03.0180|MP44\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.940\tKREPB5\t\tGO:0009451\tPMID:12796303\tIMP\t\tP\tKREPB5\tTb11.03.0180|MP44\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.940\tKREPB5\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPB5\tTb11.03.0180|MP44\tmRNA\ttaxon:185431\t20100208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.940\tKREPB5\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tKREPB5\tTb11.03.0180|MP44\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.940\tKREPB5\t\tGO:0045293\tPMID:12649499\tRCA\t\tC\tKREPB5\tTb11.03.0180|MP44\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9400\tTb927.11.9400\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\tTb11.01.1170\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9410\tTb927.11.9410\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein\tTb11.01.1180\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9420\tTb927.11.9420\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATP synthase, putative\tTb11.01.1190\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9420\tTb927.11.9420\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tATP synthase, putative\tTb11.01.1190\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9420\tTb927.11.9420\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tATP synthase, putative\tTb11.01.1190\tmRNA\ttaxon:185431\t20170726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9430\tp62\t\tGO:0003700\tPMID:19386623\tIDA\t\tF\tTFIIH basal transcription factor subunit\tTb11.01.1200\tmRNA\ttaxon:185431\t20100916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9430\tp62\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tTFIIH basal transcription factor subunit\tTb11.01.1200\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9430\tp62\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor subunit\tTb11.01.1200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9430\tp62\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tTFIIH basal transcription factor subunit\tTb11.01.1200\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9440\tCMF63\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tComponent of motile flagella 63\tTb11.01.1210\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9440\tCMF63\t\tGO:0060285\tPMID:17227795\tIMP\t\tP\tComponent of motile flagella 63\tTb11.01.1210\tmRNA\ttaxon:185431\t20090527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9450\tPPIase\t\tGO:0003755\tGO_REF:0000012\tISA\tUniProtKB:CYP8_CAEEL\tF\tcyclophilin type peptidyl-prolyl cis-trans isomerase, putative\tTb11.01.1215\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9450\tPPIase\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tcyclophilin type peptidyl-prolyl cis-trans isomerase, putative\tTb11.01.1215\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9450\tPPIase\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tcyclophilin type peptidyl-prolyl cis-trans isomerase, putative\tTb11.01.1215\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9450\tPPIase\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR002130\tP\tcyclophilin type peptidyl-prolyl cis-trans isomerase, putative\tTb11.01.1215\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9450\tPPIase\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tcyclophilin type peptidyl-prolyl cis-trans isomerase, putative\tTb11.01.1215\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9470\tTb927.11.9470\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001164\tF\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.1230\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9470\tTb927.11.9470\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR001164\tC\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.1230\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9470\tTb927.11.9470\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.1230\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9470\tTb927.11.9470\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tADP-ribosylation factor GTPase activating protein, putative\tTb11.01.1230\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.950\tDRBD14\t\tGO:0003723\tPMID:18840477\tIMP\t\tF\tRNA-binding protein, putative\tTb11.03.0170\tmRNA\ttaxon:185431\t20090827\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.950\tDRBD14\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tRNA-binding protein, putative\tTb11.03.0170\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.950\tDRBD14\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\tTb11.03.0170\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9500\tTb927.11.9500\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9500\tTb927.11.9500\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1260\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9510\tTb927.11.9510\t\tGO:0003676\tGO_REF:0000011\tISM\tInterPro:IPR001878\tF\tnucleic acid binding protein, putative\tTb11.01.1270\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9510\tTb927.11.9510\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tnucleic acid binding protein, putative\tTb11.01.1270\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9510\tTb927.11.9510\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tnucleic acid binding protein, putative\tTb11.01.1270\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9510\tTb927.11.9510\t\tGO:0034399\tPMID:28034897\tIDA\t\tC\tnucleic acid binding protein, putative\tTb11.01.1270\tmRNA\ttaxon:185431\t20170201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9520\tTb927.11.9520\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000380\tF\tDNA topoisomerase III, putative\tTb11.01.1280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9520\tTb927.11.9520\t\tGO:0003917\tGO_REF:0000011\tISM\tInterPro:IPR000380\tF\tDNA topoisomerase III, putative\tTb11.01.1280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9520\tTb927.11.9520\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDNA topoisomerase III, putative\tTb11.01.1280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9520\tTb927.11.9520\t\tGO:0006265\tGO_REF:0000011\tISM\tInterPro:IPR000380\tP\tDNA topoisomerase III, putative\tTb11.01.1280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9520\tTb927.11.9520\t\tGO:0006268\tGO_REF:0000011\tISM\tInterPro:IPR000380\tP\tDNA topoisomerase III, putative\tTb11.01.1280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9520\tTb927.11.9520\t\tGO:0006304\tGO_REF:0000011\tISM\tInterPro:IPR006171\tP\tDNA topoisomerase III, putative\tTb11.01.1280\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9520\tTb927.11.9520\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tDNA topoisomerase III, putative\tTb11.01.1280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9520\tTb927.11.9520\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDNA topoisomerase III, putative\tTb11.01.1280\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:Q9C5W6\tF\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0005737\tPMID:15653691\tIDA\t\tC\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20150708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0005930\tPMID:24741115\tIDA\t\tC\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20170713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0006897\tPMID:19925803\tIMP\t\tP\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20091207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0007265\tGO_REF:0000012\tISA\tUniProtKB:Q9C5W6\tP\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0016281\tPMID:24962368\tIPI\tGeneDB:Tb927.10.5020|GeneDB:Tb927.9.5460\tC\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0045839\tPMID:15653691\tIMP\t\tP\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20150708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9530\t14-3-3-I\t\tGO:0097542\tGO_REF:0000109\tIDA\t\tC\t14-3-3 protein 1\tTb11.01.1290\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9540\tTb927.11.9540\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1300\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9550\tTb927.11.9550\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000862\tF\treplication factor C, subunit 4, putative\tTb11.01.1310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9550\tTb927.11.9550\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR003959\tF\treplication factor C, subunit 4, putative\tTb11.01.1310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9550\tTb927.11.9550\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\treplication factor C, subunit 4, putative\tTb11.01.1310\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9550\tTb927.11.9550\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\treplication factor C, subunit 4, putative\tTb11.01.1310\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9550\tTb927.11.9550\t\tGO:0005663\tGO_REF:0000011\tISM\tInterPro:IPR000862\tC\treplication factor C, subunit 4, putative\tTb11.01.1310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9550\tTb927.11.9550\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\treplication factor C, subunit 4, putative\tTb11.01.1310\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9550\tTb927.11.9550\t\tGO:0006260\tGO_REF:0000011\tISM\tInterPro:IPR000862\tP\treplication factor C, subunit 4, putative\tTb11.01.1310\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9560\tTb927.11.9560\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\toxidoreductase, putative\tTb11.01.1320\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9560\tTb927.11.9560\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\toxidoreductase, putative\tTb11.01.1320\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9560\tTb927.11.9560\t\tGO:0016491\tGO_REF:0000011\tISM\tInterPro:IPR000172\tF\toxidoreductase, putative\tTb11.01.1320\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9560\tTb927.11.9560\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\toxidoreductase, putative\tTb11.01.1320\tmRNA\ttaxon:185431\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9570\tTb927.11.9570\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1330\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9590\tTb927.11.9590\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tS-adenosylhomocysteine hydrolase, putative\tTb11.01.1350\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.960\tTb927.11.960\t\tGO:0000160\tGO_REF:0000011\tISM\tInterPro:IPR002078\tP\tATPase, putative\tTb11.03.0160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.960\tTb927.11.960\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tATPase, putative\tTb11.03.0160\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.960\tTb927.11.960\t\tGO:0006355\tGO_REF:0000011\tISM\tInterPro:IPR002078\tP\tATPase, putative\tTb11.03.0160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.960\tTb927.11.960\t\tGO:0016887\tGO_REF:0000011\tISM\tPfam:PF00004\tF\tATPase, putative\tTb11.03.0160\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9600\tTb927.11.9600\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\tTb11.01.1360\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9600\tTb927.11.9600\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1360\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9610\tEIF3I\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:Q13347\tF\tEukaryotic translation initiation factor 3 subunit 2\tTb11.01.1370\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9610\tEIF3I\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LmjF.36.3880\tC\tEukaryotic translation initiation factor 3 subunit 2\tTb11.01.1370\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9610\tEIF3I\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tEukaryotic translation initiation factor 3 subunit 2\tTb11.01.1370\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9610\tEIF3I\t\tGO:0005852\tGO_REF:0000024\tISO\tGeneDB:LmjF.36.3880\tC\tEukaryotic translation initiation factor 3 subunit 2\tTb11.01.1370\tmRNA\ttaxon:185431\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9610\tEIF3I\t\tGO:0006446\tGO_REF:0000012\tISA\tUniProtKB:Q13347\tP\tEukaryotic translation initiation factor 3 subunit 2\tTb11.01.1370\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9620\tTb927.11.9620\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1380\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9620\tTb927.11.9620\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1380\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9630\tTb927.11.9630\t\tGO:0016192\tGO_REF:0000011\tISM\tInterPro:IPR005024\tP\tSnf7, putative\tTb11.01.1390\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9640\tTb927.11.9640\t\tGO:0004820\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00389\tF\tglycyl-tRNA synthetase, putative\tTb11.01.1400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9640\tTb927.11.9640\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglycyl-tRNA synthetase, putative\tTb11.01.1400\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9640\tTb927.11.9640\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR004154\tP\tglycyl-tRNA synthetase, putative\tTb11.01.1400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9640\tTb927.11.9640\t\tGO:0006426\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00389\tP\tglycyl-tRNA synthetase, putative\tTb11.01.1400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9640\tTb927.11.9640\t\tGO:0009345\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00389\tC\tglycyl-tRNA synthetase, putative\tTb11.01.1400\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9650\tTb927.11.9650\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1410\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9660\tTb927.11.9660\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tZinc finger, C3HC4 type (RING finger), putative\tTb11.01.1420\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9660\tTb927.11.9660\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tZinc finger, C3HC4 type (RING finger), putative\tTb11.01.1420\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9660\tTb927.11.9660\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tZinc finger, C3HC4 type (RING finger), putative\tTb11.01.1420\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9660\tTb927.11.9660\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tZinc finger, C3HC4 type (RING finger), putative\tTb11.01.1420\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9670\tGCVT\t\tGO:0004047\tGO_REF:0000011\tISM\tInterPro:IPR006222\tF\tglycine cleavage system T protein, putative\tTb11.01.1440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9670\tGCVT\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tglycine cleavage system T protein, putative\tTb11.01.1440\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9670\tGCVT\t\tGO:0019464\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00528\tP\tglycine cleavage system T protein, putative\tTb11.01.1440\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9690\tSPB1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSpindle pole body protein 1\tTb11.01.1460\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9690\tSPB1\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\tSpindle pole body protein 1\tTb11.01.1460\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9690\tSPB1\t\tGO:0044732\tPMID:29931198\tIDA\t\tC\tSpindle pole body protein 1\tTb11.01.1460\tmRNA\ttaxon:185431\t20180626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.970\tTb927.11.970\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0150\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.970\tTb927.11.970\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.03.0150\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9700\tTb927.11.9700\t\tGO:0003700\tGO_REF:0000012\tISA\tUniProtKB:Q7KM15_DROME\tF\ttranscription factor BTF3, putative\tTb11.01.1465\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9700\tTb927.11.9700\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttranscription factor BTF3, putative\tTb11.01.1465\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9700\tTb927.11.9700\t\tGO:0005854\tGO_REF:0000012\tISA\tUniProtKB:Q7KM15_DROME\tC\ttranscription factor BTF3, putative\tTb11.01.1465\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9700\tTb927.11.9700\t\tGO:0040010\tGO_REF:0000012\tISA\tUniProtKB:Q18885\tP\ttranscription factor BTF3, putative\tTb11.01.1465\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9700\tTb927.11.9700\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\ttranscription factor BTF3, putative\tTb11.01.1465\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9710\tRPL10A\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR002143\tF\t60S ribosomal protein L10a, putative\tTb11.01.1470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9710\tRPL10A\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L10a, putative\tTb11.01.1470\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9710\tRPL10A\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR002143\tP\t60S ribosomal protein L10a, putative\tTb11.01.1470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9710\tRPL10A\t\tGO:0015934\tGO_REF:0000011\tISM\tInterPro:IPR002143\tC\t60S ribosomal protein L10a, putative\tTb11.01.1470\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9710\tRPL10A\t\tGO:0042301\tPMID:30230089\tIDA\t\tF\t60S ribosomal protein L10a, putative\tTb11.01.1470\tmRNA\ttaxon:185431\t20181208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9720\tTb927.11.9720\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR000592\tF\t40S ribosomal protein S27, putative\tTb11.01.1475\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9720\tTb927.11.9720\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR000592\tC\t40S ribosomal protein S27, putative\tTb11.01.1475\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9720\tTb927.11.9720\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR000592\tP\t40S ribosomal protein S27, putative\tTb11.01.1475\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9730\tTb927.11.9730\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:IPR008195\tF\t60S ribosomal protein L34, putative\tTb11.01.1480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9730\tTb927.11.9730\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t60S ribosomal protein L34, putative\tTb11.01.1480\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9730\tTb927.11.9730\t\tGO:0005840\tGO_REF:0000011\tISM\tInterPro:IPR008195\tC\t60S ribosomal protein L34, putative\tTb11.01.1480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9730\tTb927.11.9730\t\tGO:0006412\tGO_REF:0000011\tISM\tInterPro:IPR008195\tP\t60S ribosomal protein L34, putative\tTb11.01.1480\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9740\tTb927.11.9740\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\ttRNA intron endonuclease, catalytic C-terminal domain containing protein, putative\tTb11.01.1490\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9740\tTb927.11.9740\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\ttRNA intron endonuclease, catalytic C-terminal domain containing protein, putative\tTb11.01.1490\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9750\tTb927.11.9750\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tProtein of unknown function (DUF498/DUF598), putative\tTb11.01.1500\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9750\tTb927.11.9750\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tProtein of unknown function (DUF498/DUF598), putative\tTb11.01.1500\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9760\tTb927.11.9760\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1510\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9770\tTb927.11.9770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1530\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9780\tNUP119\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP119\tTb11.01.1540\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9780\tNUP119\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP119\tTb11.01.1540\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9780\tNUP119\t\tGO:0044611\tPMID:26891179\tIDA\t\tC\tNucleoporin NUP119\tTb11.01.1540\tmRNA\ttaxon:185431\t20170215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9790\tTb927.11.9790\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tcalmodulin, putative\tTb11.01.1550\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9790\tTb927.11.9790\t\tGO:0097740\tGO_REF:0000109\tIDA\t\tC\tcalmodulin, putative\tTb11.01.1550\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.980\tNUP158\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tNucleoporin NUP158\tTb11.03.0140\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.980\tNUP158\t\tGO:0005643\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP158\tTb11.03.0140\tmRNA\ttaxon:185431\t20160814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.980\tNUP158\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP158\tTb11.03.0140\tmRNA\ttaxon:185431\t20090619\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.980\tNUP158\t\tGO:0031080\tPMID:26891179\tIPI\tGeneDB:Tb927.11.2950\tC\tNucleoporin NUP158\tTb11.03.0140\tmRNA\ttaxon:185431\t20170217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9800\tTb927.11.9800\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\tTb11.01.1560\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9810\tNH3\t\tGO:0020015\tPMID:24792668\tIDA\t\tC\tNUDIX hydrolase 3, putative\tNudix3|Tb11.01.1570\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9810\tNH3\tNOT\tGO:0031087\tPMID:26038549\tIDA\t\tP\tNUDIX hydrolase 3, putative\tNudix3|Tb11.01.1570\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9810\tNH3\tNOT\tGO:0050072\tPMID:26038549\tIDA\t\tF\tNUDIX hydrolase 3, putative\tNudix3|Tb11.01.1570\tmRNA\ttaxon:185431\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9830\tTb927.11.9830\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.1600\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9830\tTb927.11.9830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.1600\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9830\tTb927.11.9830\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.1600\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9830\tTb927.11.9830\t\tGO:0005762\tPMID:18364347\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.1600\tmRNA\ttaxon:185431\t20170601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9830\tTb927.11.9830\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.01.1600\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9860\tTb927.11.9860\t\tGO:0005509\tGO_REF:0000011\tISM\tInterPro:IPR002048\tF\tEF-hand domain pair, putative\tTb11.01.1625\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9870\tTelAP1\t\tGO:0005634\tPMID:29385523\tIDA\t\tC\tTelomere-associated protein 1\tTb11.01.1630\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9870\tTelAP1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tTelomere-associated protein 1\tTb11.01.1630\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9870\tTelAP1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tTelomere-associated protein 1\tTb11.01.1630\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9870\tTelAP1\t\tGO:0042162\tPMID:29385523\tIDA\t\tF\tTelomere-associated protein 1\tTb11.01.1630\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9870\tTelAP1\t\tGO:0070565\tPMID:29385523\tIPI\tGeneDB:Tb927.10.12850\tC\tTelomere-associated protein 1\tTb11.01.1630\tmRNA\ttaxon:185431\t20180830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9890\tTb927.11.9890\t\tGO:0005047\tGO_REF:0000012\tISA\tUniProtKB:P08240\tF\tsignal recognition particle receptor alpha subunit, putative\tTb11.01.1650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9890\tTb927.11.9890\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tsignal recognition particle receptor alpha subunit, putative\tTb11.01.1650\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9890\tTb927.11.9890\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tsignal recognition particle receptor alpha subunit, putative\tTb11.01.1650\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9890\tTb927.11.9890\t\tGO:0005785\tGO_REF:0000012\tISA\tUniProtKB:P08240\tC\tsignal recognition particle receptor alpha subunit, putative\tTb11.01.1650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9890\tTb927.11.9890\t\tGO:0006613\tGO_REF:0000012\tISA\tUniProtKB:P08240\tP\tsignal recognition particle receptor alpha subunit, putative\tTb11.01.1650\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.990\tTb927.11.990\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tautophagy protein APG9, putative\tTb11.03.0130\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9900\tTb927.11.9900\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tphytoene synthase, putative\tTb11.01.1660\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9910\tTb927.11.9910\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF3846)/TPR repeat, putative\tTb11.01.1670\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9910\tTb927.11.9910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF3846)/TPR repeat, putative\tTb11.01.1670\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9910\tTb927.11.9910\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tDomain of unknown function (DUF3846)/TPR repeat, putative\tTb11.01.1670\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9920\tTb927.11.9920\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tpolyubiquitin, putative\tTb11.01.1680\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9920\tTb927.11.9920\t\tGO:0006464\tGO_REF:0000012\tISA\tUniProtKB:P14792\tP\tpolyubiquitin, putative\tTb11.01.1680\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9920\tTb927.11.9920\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tpolyubiquitin, putative\tTb11.01.1680\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9920\tTb927.11.9920\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tpolyubiquitin, putative\tTb11.01.1680\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9920\tTb927.11.9920\t\tGO:0120118\tGO_REF:0000109\tIDA\t\tC\tpolyubiquitin, putative\tTb11.01.1680\tmRNA\ttaxon:185431\t20181023\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0005741\tPMID:23221899\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0005747\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0006120\tPMID:21610103\tIDA\t\tP\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0008137\tPMID:21610103\tIDA\t\tF\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0016491\tPMID:21610103\tIDA\t\tF\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0030964\tPMID:22158713\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20170607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9950\tSLAP1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSpliced Leader Array Protein 1\tTb11.01.1710\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9950\tSLAP1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSpliced Leader Array Protein 1\tTb11.01.1710\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9970\tTb927.11.9970\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSmall acidic protein family, putative\tTb11.01.1730\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0004591\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tF\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0005739\tPMID:18242729\tIDA\t\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20160920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:P20967\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0006554\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0006568\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0045252\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9990\tTb927.11.9990\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tglycosyl transferase-like protein\tTb11.01.1750\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9990\tTb927.11.9990\t\tGO:0009103\tGO_REF:0000011\tISM\tInterPro:IPR002654\tP\tglycosyl transferase-like protein\tTb11.01.1750\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.100\tRHS1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tretrotransposon hot spot protein 1 (RHS1), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.100\tRHS1\t\tGO:0005634\tGO_REF:0000002\tTAS\t\tC\tretrotransposon hot spot protein 1 (RHS1), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1080\tRHS5\t\tGO:0005634\tGO_REF:0000002\tTAS\t\tC\tretrotransposon hot spot protein 5 (RHS5), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1170\tRHS5\t\tGO:0005634\tGO_REF:0000002\tTAS\t\tC\tretrotransposon hot spot protein 5 (RHS5), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1170\tRHS5\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tretrotransposon hot spot protein 5 (RHS5), putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1180\tTb927.2.1180\t\tGO:0005634\tGO_REF:0000002\tTAS\t\tC\tretrotransposon hot spot protein 3 (RHS3), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1210\tRHS4\t\tGO:0005634\tPMID:30544263\tIDA\t\tC\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1210\tRHS4\t\tGO:0005634\tGO_REF:0000002\tTAS\t\tC\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1210\tRHS4\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1210\tRHS4\t\tGO:0006406\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1210\tRHS4\t\tGO:0042789\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1210\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1330\tTb927.2.1330\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tretrotransposon hot spot protein (RHS, pseudogene), putative\t\tpseudogenic_transcript\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1460\tTb927.2.1460\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1470\tTb927.2.1470\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1560\tTb927.2.1560\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.509215.40\tC\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20150929\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1560\tTb927.2.1560\t\tGO:0003755\tGO_REF:0000024\tISS\t\tF\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1560\tTb927.2.1560\t\tGO:0006457\tGO_REF:0000024\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1600\tTb927.2.1600\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tinvariant surface glycoprotein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1680\tTb927.2.1680\t\tGO:0003755\tGO_REF:0000024\tISS\t\tF\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1680\tTb927.2.1680\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1680\tTb927.2.1680\t\tGO:0005739\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1680\tTb927.2.1680\t\tGO:0006457\tGO_REF:0000024\tISS\t\tP\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1680\tTb927.2.1680\t\tGO:0030964\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20170606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1680\tTb927.2.1680\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1680\tTb927.2.1680\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1700\tESP10\t\tGO:0020016\tPMID:25931509\tIDA\t\tC\tEnriched in surface-labeled proteome protein 10\t27H14.90\tmRNA\ttaxon:185431\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1720\tTb927.2.1720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1740\tTb927.2.1740\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1740\tTb927.2.1740\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1760\tTb927.2.1760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1760\tTb927.2.1760\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1760\tTb927.2.1760\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1780\tGPI3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tGlcNAc-PI synthesis protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1780\tGPI3\t\tGO:0016757\tGO_REF:0000011\tISM\tPfam:PF00534\tF\tGlcNAc-PI synthesis protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1790\tTb927.2.1790\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1800\tPOLD1\t\tGO:0003887\tGO_REF:0000011\tISM\tInterPro:IPR002064\tF\tDNA polymerase delta catalytic subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1800\tPOLD1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tDNA polymerase delta catalytic subunit, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1800\tPOLD1\t\tGO:0006260\tGO_REF:0000011\tISM\tPfam:PF00136\tP\tDNA polymerase delta catalytic subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0004386\tGO_REF:0000024\tISS\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0005524\tGO_REF:0000024\tISS\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tISWI complex protein\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tISWI complex protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0009372\tPMID:24336212\tIMP\t\tP\tISWI complex protein\t\tmRNA\ttaxon:185431\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0031010\tPMID:26378228\tIPI\tGeneDB:Tb927.11.10330|GeneDB:Tb927.7.1060|GeneDB:Tb927.10.5450\tC\tISWI complex protein\t\tmRNA\ttaxon:185431\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0044145\tPMID:24336212\tIMP\t\tP\tISWI complex protein\t\tmRNA\ttaxon:185431\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0044212\tPMID:26378228\tIDA\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1820\tTb927.2.1820\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1820\tTb927.2.1820\t\tGO:0004713\tGO_REF:0000011\tISM\tInterPro:IPR001245\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1820\tTb927.2.1820\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1820\tTb927.2.1820\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1860\tREMC2\t\tGO:0003723\tPMID:22396527\tIDA\t\tF\tmitochondrial RNA binding complex 1 subunit\tMRB1860\tmRNA\ttaxon:185431\t20120910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1860\tREMC2\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB1860\tmRNA\ttaxon:185431\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1860\tREMC2\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB1860\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1860\tREMC2\t\tGO:0016554\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tMRB1860\tmRNA\ttaxon:185431\t20120910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1860\tREMC2\t\tGO:0020023\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB1860\tmRNA\ttaxon:185431\t20180307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1860\tREMC2\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB1860\tmRNA\ttaxon:185431\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1860\tREMC2\t\tGO:0048255\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tMRB1860\tmRNA\ttaxon:185431\t20120910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1860\tREMC2\t\tGO:0090615\tPMID:22396527\tIC\tGO:0031019\tP\tmitochondrial RNA binding complex 1 subunit\tMRB1860\tmRNA\ttaxon:185431\t20160921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1890\tATG3\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tE2-like ubiquitin-conjugation enzyme\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1890\tATG3\t\tGO:0006914\tGO_REF:0000012\tISA\tUniProtKB:P40344\tP\tE2-like ubiquitin-conjugation enzyme\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1890\tATG3\t\tGO:0015031\tGO_REF:0000012\tISA\tUniProtKB:P40344\tP\tE2-like ubiquitin-conjugation enzyme\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1920\tTb927.2.1920\t\tGO:0005886\tPMID:11356509\tTAS\t\tC\texpression site-associated gene 5 (ESAG5) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2020\tTb927.2.2020\t\tGO:0005886\tPMID:11356509\tTAS\t\tC\texpression site-associated gene 3 (ESAG3) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2060\tTb927.2.2060\t\tGO:0005886\tPMID:9574923\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2060\tTb927.2.2060\t\tGO:0006952\tPMID:9574923\tTAS\t\tP\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2060\tTb927.2.2060\t\tGO:0020033\tPMID:9719514\tTAS\t\tP\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2070\tTb927.2.2070\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2090\tTb927.2.2090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2090\tTb927.2.2090\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2120\tNEK22\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tMitogen-activated kinase kinase kinase, putative\t25N14.205\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2120\tNEK22\t\tGO:0004674\tPMID:1382974\tISA\tUniProtKB:P51954\tF\tMitogen-activated kinase kinase kinase, putative\t25N14.205\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2120\tNEK22\t\tGO:0005524\tGO_REF:0000011\tISM\t\tF\tMitogen-activated kinase kinase kinase, putative\t25N14.205\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2120\tNEK22\t\tGO:0006468\tGO_REF:0000011\tISM\t\tP\tMitogen-activated kinase kinase kinase, putative\t25N14.205\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2130\tTb927.2.2130\t\tGO:0003924\tGO_REF:0000012\tISA\tUniProtKB:Q9V3I2_DROME\tF\tsmall GTP-binding protein RAB6, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2130\tTb927.2.2130\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\tsmall GTP-binding protein RAB6, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2130\tTb927.2.2130\t\tGO:0005886\tGO_REF:0000012\tISA\tUniProtKB:Q9V3I2_DROME\tC\tsmall GTP-binding protein RAB6, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2130\tTb927.2.2130\t\tGO:0016191\tGO_REF:0000012\tISA\tUniProtKB:Q9V3I2_DROME\tP\tsmall GTP-binding protein RAB6, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2130\tTb927.2.2130\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:Q9V3I2_DROME\tP\tsmall GTP-binding protein RAB6, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2180\tRRP41B\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tribosomal RNA processing protein 41B\t25N14.175\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2180\tRRP41B\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tribosomal RNA processing protein 41B\t25N14.175\tmRNA\ttaxon:185431\t20170801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2180\tRRP41B\t\tGO:0016072\tPMID:11447124\tIMP\t\tP\tribosomal RNA processing protein 41B\t25N14.175\tmRNA\ttaxon:185431\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2190\tHDAC3\t\tGO:0004407\tPMID:20624217\tIDA\t\tF\thistone deacetylase 3\t\tmRNA\ttaxon:185431\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2190\tHDAC3\t\tGO:0005634\tPMID:20624217\tIDA\t\tC\thistone deacetylase 3\t\tmRNA\ttaxon:185431\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:185431", "rule": 59 } ], "gorule-0000002": [], "gorule-0000005": [], "gorule-0000006": [], "gorule-0000007": [], "gorule-0000008": [ { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3910\tCDC23\t\tGO:0007049\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tP\tAnaphase-promoting complex subunit CDC23\t\tmRNA\ttaxon:185431\t20180123\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4420\tTb927.1.4420\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:MDR1B_MOUSE\tP\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0019222\tPMID:30563898\tIMP\t\tP\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20200412\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10020\tRABEX5\t\tGO:0000910\tPMID:29603841\tIMP\t\tP\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10330\tCDC27\t\tGO:0000090\tPMID:15994309\tIMP\t\tP\tAnaphase-promoting complex subunit CDC27\t\tmRNA\ttaxon:185431\t20200403\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10330\tCDC27\t\tGO:0007049\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tP\tAnaphase-promoting complex subunit CDC27\t\tmRNA\ttaxon:185431\t20180123\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10380\tTb927.10.10380\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10440\tMCP8\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0007049\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tP\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11390\tTb927.10.11390\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000915\tC\t60S ribosomal protein L6, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11910\tTb927.10.11910\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR007114\tP\tmajor facilitator superfamily, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12240\tTb927.10.12240\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00106\tP\t3-ketoacyl-CoA reductase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1270\tTb927.10.1270\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR005829\tP\tmismatch repair protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12720\tBOH1\t\tGO:0000910\tPMID:31217284\tIMP\t\tP\tBait On Hook 1\t\tmRNA\ttaxon:185431\t20190709\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13120\tMCP14\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13580\tTb927.10.13580\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR007114\tP\tmajor facilitator superfamily protein (MFS), putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13790\tTb927.10.13790\t\tGO:0000910\tPMID:30153427\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181207\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13870\tTb927.10.13870\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004344\tP\ttubulin tyrosine ligase protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14280\tMCP20\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14530\tRpn8\t\tGO:0016049\tPMID:12213827\tIMP\t\tP\t19S proteasome non-atpase subunit 8\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14600\tRPS2\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000851\tC\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14710\tRPS2\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000851\tC\t40S ribosomal protein S2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14820\tMCP5c\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tMitochondrial ADP/ATP carrier protein 5c\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14830\tMCP5b\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tMitochondrial ADP/ATP carrier protein 5b\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14840\tMCP5a\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tMitochondrial ADP/ATP carrier protein 5a\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15710\tMCP7\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1720\tTb927.10.1720\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2980\tRPN11\t\tGO:0016049\tPMID:12213827\tIMP\t\tP\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3030\tRPN11\t\tGO:0016049\tPMID:12213827\tIMP\t\tP\tproteasome regulatory non-ATPase subunit 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3150\tTb927.10.3150\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00583\tP\tN-acetyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3370\tTb927.10.3370\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001813\tC\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3380\tTb927.10.3380\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001813\tC\t60S acidic ribosomal protein P2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3660\tcASAT\t\tGO:0009058\tGO_REF:0000011\tISM\tInterPro:IPR004839\tP\taspartate aminotransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3990\tDHH1\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tDHH1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4000\tTb927.10.4000\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001753\tP\tmethylglutaconyl-CoA hydratase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4050\tTb927.10.4050\t\tGO:0009058\tGO_REF:0000011\tISM\tInterPro:IPR004839\tP\tserine palmitoyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4120\tRPL30\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000231\tC\t60S ribosomal protein L30\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR005475\tP\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4430\tPUF1\t\tGO:0016049\tPMID:11897132\tIMP\t\tP\tpumillo RNA binding protein PUF1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4460\tTb927.10.4460\t\tGO:0006464\tGO_REF:0000012\tISA\tUniProtKB:Q9UIC8\tP\tleucine carboxyl methyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4520\tTb927.10.4520\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001345\tP\t6-phosphofructo-2-kinase/fructose-2,6-bisphosphatas, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4910\tMCP4\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001892\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001892\tC\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5460\tTb927.10.5460\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000988\tC\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5480\tTb927.10.5480\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000988\tC\t60S ribosomal protein L24, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.560\tTb927.10.560\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000266\tC\t40S ribosomal proteins S11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5670\tNAT1\t\tGO:0006464\tPMID:11163439\tIC\tGO:0008080\tP\tN-acetyltransferase subunit Nat1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6260\tTb927.10.6260\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6290\tTb927.10.6290\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0000910\tPMID:31540971\tIMP\t\tP\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20191114\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0000910\tPMID:30171070\tIPI\tGeneDB:Tb927.11.15800\tP\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20181018\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.660\tTb927.10.660\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001017\tP\t2-oxoisovalerate dehydrogenase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6630\tDBP2A\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tDEAD box protein 2A, putative\tHEL64\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6800\tTb927.10.6800\t\tGO:0009987\tGO_REF:0000012\tISA\tUniProtKB:Q9Y295\tP\tdevelopmentally regulated GTP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6870\tTb927.10.6870\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002198\tP\tshort-chain dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.690\tTb927.10.690\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7080\tTb927.10.7080\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0000910\tPMID:23125353\tIMP\t\tP\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8240\tCIF4\t\tGO:0000910\tPMID:31540971\tIMP\t\tP\tCytokinesis initiation factor 4\t\tmRNA\ttaxon:185431\t20191023\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8430\tTb927.10.8430\t\tGO:0005622\tGO_REF:0000011\tISM\t\tC\t40S ribosomal protein S12, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.870\tFRW1\t\tGO:0000910\tPMID:30171070\tIPI\tGeneDB:Tb927.11.15800\tP\tFurrow 1 protein\t\tmRNA\ttaxon:185431\t20181018\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0000910\tPMID:31515877\tIMP\t\tP\tcentrin-3\t\tmRNA\ttaxon:185431\t20191122\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8870\tPFR-AF1\t\tGO:0000910\tPMID:32295845\tIMP\t\tP\tParaflagellar rod (PFR) assembly factor 1\t\tmRNA\ttaxon:185431\t20200907\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8910\tNUP181\t\tGO:0046907\tPMID:19525551\tISS\t\tP\tNucleoporin NUP181\t\tmRNA\ttaxon:185431\t20130402\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9560\tTb927.10.9560\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00107\tP\toxidoreductase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9750\tupl3\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000569\tC\tubiquitin-protein ligase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9780\tTb927.10.9780\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9880\tTbL18LP\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000039\tC\t60S ribosomal protein L18, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00106\tP\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10260\tPEX3\t\tGO:0033365\tPMID:31341002\tIMP\t\tP\tPeroxin 3, putative\tTb11.01.2020\tmRNA\ttaxon:185431\t20191017\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0006139\tPMID:15694484\tISA\t\tP\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0006810\tGO_REF:0000024\tISS\t\tP\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20120821\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001865\tC\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10910\tTb927.11.10910\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001865\tC\t40S ribosomal protein SA, putative\tTb11.01.2680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10930\tTUBD1\t\tGO:0016049\tPMID:12099434\tIDA\t\tP\ttubulin delta chain\tTb11.01.2695\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12110\tTb927.11.12110\t\tGO:0006139\tGO_REF:0000011\tISM\tInterPro:IPR001650\tP\tRNA helicase, putative\tTb11.01.3930\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13360\tTb927.11.13360\t\tGO:0019538\tGO_REF:0000011\tISM\tPfam:PF00004\tP\tAAA ATPase, putative\tTb11.01.4940\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13440\tMCP21\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.01.5040\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13810\tTb927.11.13810\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.5370\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13940\tTb927.11.13940\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\tTb11.01.5510\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14200\tCDC34\t\tGO:0000910\tPMID:28609481\tIMP\t\tP\tubiquitin-conjugating enzyme CDC34\tTb11.01.5790\tmRNA\ttaxon:185431\t20190814\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14200\tCDC34\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme CDC34\tTb11.01.5790\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14520\tTb927.11.14520\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000181\tP\tPolypeptide deformylase 1\tTb11.01.6120\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14630\tTb927.11.14630\t\tGO:0006139\tGO_REF:0000011\tISM\tInterPro:IPR001410\tP\tATP-dependent DNA DEAD/DEAH box helicase, putative\tTb11.01.6260\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0007093\tPMID:33415107\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20210308\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15150\tTb927.11.15150\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002123\tP\t1-acyl-sn-glycerol-3-phosphate acyltransferase, putative\tTb11.01.6800\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15460\tTb927.11.15460\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.7100\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15640\tMERS1\t\tGO:0016049\tPMID:30333188\tIMP\t\tP\tmitochondrial RNA binding complex 1 subunit\tNH1|Tb11.01.7290\tmRNA\ttaxon:185431\t20190107\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1600\tTb927.11.1600\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001130\tP\ttatD related deoxyribonuclease, putative\tTb11.55.0020\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16000\tTb927.11.16000\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR006055\tC\texonuclease, putative\tTb11.01.7650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16280\tTb927.11.16280\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR002171\tC\t60S ribosomal protein L2, putative\tTb11.01.7960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16480\tTb927.11.16480\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001753\tP\tenoyl-CoA hydratase/isomerase family protein, putative\tTb11.01.8200\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16570\tTb927.11.16570\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.8290\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0006810\tGO_REF:0000024\tISS\t\tP\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17000\tAIR9\t\tGO:0000910\tPMID:22329999\tIMP\t\tP\tAIR9-like protein\tTb11.01.8770\tmRNA\ttaxon:185431\t20180122\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1840\tCAP46\t\tGO:0000910\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\tTb11.39.0004\tmRNA\ttaxon:185431\t20220424\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2470\tTb927.11.2470\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000819\tC\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.0070\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2690\tASCT\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR004165\tP\tSuccinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial\tTb11.02.0290\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.270\tMCP10\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.03.0870\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2920\tTb927.11.2920\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001345\tP\tglycerolphosphate mutase, putative\tTb11.02.0440\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0006725\tGO_REF:0000011\tISM\tInterPro:IPR000733\tP\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3310\tTb927.11.3310\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme, putative\tTb11.02.0815\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4220\tPAT6\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 6, putative\tTb11.02.1710\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4290\tRPS12\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000530\tC\t40S ribosomal protein S12\tTb11.02.1830\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4300\tRPL18\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000039\tC\t60S ribosomal protein L18, putative\tTb11.02.1840\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR000873\tP\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4530\tARD1\t\tGO:0016049\tPMID:11163439\tIMP\t\tP\tN-acetyltransferase subunit ARD1\tTb11.02.2110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4980\tTb927.11.4980\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.2620\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0009058\tGO_REF:0000011\tISM\tInterPro:IPR004839\tP\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5360\tTb927.11.5360\t\tGO:0008152\tGO_REF:0000012\tISA\tUniProtKB:P14065\tP\taldo/keto reductase, putative\tTb11.02.3040\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0006810\tGO_REF:0000024\tISS\t\tP\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0006810\tGO_REF:0000024\tISS\tUniProtKB:Q9JI39|Pfam:PF00005\tP\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5480\tTb927.11.5480\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR006055\tC\tphosphotransferase, putative\tTb11.02.3160\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5590\tAP1\t\tGO:0007049\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tP\tAnaphase-promoting complex-associated protein AP1\tTb11.02.3290\tmRNA\ttaxon:185431\t20180123\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5740\tTb927.11.5740\t\tGO:0016043\tGO_REF:0000011\tISM\tInterPro:IPR003104\tP\tformin-like protein\tTb11.02.3470\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6090\tTb927.11.6090\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001130\tP\ttatD related deoxyribonuclease, putative\tTb11.02.3920\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR003439\tP\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6170\tSEC31\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:O94979\tP\tprotein transport protein SEC31, putative\tTb11.02.4040\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6350\tBDF7\t\tGO:0019538\tGO_REF:0000011\tISM\tPfam:PF00004\tP\tBDF-ATPase, putative\tTb11.02.4210\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6360\tTb927.11.6360\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000988\tC\t60S ribosomal protein L24, putative\tTb11.02.4220\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6590\tTb927.11.6590\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000819\tC\tmetallo-peptidase, Clan MF, Family M17\tTb11.02.4440\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6810\tTTL\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004344\tP\ttubulin-tyrsoine ligase-like protein, putative\tTb11.02.4640\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7060\tVSP1\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR008162\tP\tacidocalcisomal pyrophosphatase\tTb11.02.4910\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7070\tTb927.11.7070\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.4920\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7300\tTb927.11.7300\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR007114\tP\tmajor facilitator superfamily, putative\tTb11.02.5200\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7360\tTb927.11.7360\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 9, putative\tTb11.02.5260\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7420\tTb927.11.7420\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002500\tP\tphosphoadenosine phosphosulfate reductase-like protein\tTb11.02.5320\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7530\tTb927.11.7530\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR000873\tP\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.5520\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7770\tTb927.11.7770\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00106\tP\toxidoreductase-like protein\tTb11.02.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8090\tTb927.11.8090\t\tGO:0009987\tGO_REF:0000012\tISA\tUniProtKB:P37140\tP\tprotein phosphatase 1, putative\tTb11.01.0450\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0000910\tPMID:30171070\tIMP\t\tP\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20180907\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9390\tTb927.11.9390\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004143\tP\tOctanoyltransferase, putative\tTb11.01.1160\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9920\tTb927.11.9920\t\tGO:0006464\tGO_REF:0000012\tISA\tUniProtKB:P14792\tP\tpolyubiquitin, putative\tTb11.01.1680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2240\tXpo-t\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:O43592\tP\texportin-T, putative\t25N14.145\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2460\tUBC9\t\tGO:0006464\tGO_REF:0000024\tISS\t\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2970\tMCP13\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR002067\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3720\tTb927.2.3720\t\tGO:0006464\tGO_REF:0000024\tISS\t\tP\tubiquitin-conjugating enzyme, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4130\tTFEalpha1\t\tGO:0008152\tGO_REF:0000012\tISA\tUniProtKB:P55100\tP\tenoyl-CoA hydratase/Enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4740\tMRPL11\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000911\tC\tmitochondrial ribosomal protein l11\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4890\tMRPL11\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000911\tC\tmitochondrial ribosomal protein l11\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5410\tTb927.2.5410\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:Q8YV35_NOSS1\tP\tABC transporter family-like protein\t1F7.75\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5660\tADKA\t\tGO:0006139\tGO_REF:0000012\tISA\tUniProtKB:P27144\tP\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20090602\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5980\tTb927.2.5980\t\tGO:0019538\tGO_REF:0000011\tISM\tPfam:PF00004\tP\tchaperone protein ClpB1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6130\tTb927.2.6130\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:P18767\tP\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6180\tTb927.2.6180\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF03171\tP\tiron/ascorbate oxidoreductase family protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6210\tTb927.2.6210\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF03171\tP\tiron/ascorbate oxidoreductase family protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6230\tTb927.2.6230\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF03171\tP\tiron/ascorbate oxidoreductase family protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6270\tTb927.2.6270\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF03171\tP\tiron/ascorbate oxidoreductase family protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6310\tTb927.2.6310\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF03171\tP\tiron/ascorbate oxidoreductase family protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2400\tTb927.3.2400\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 10, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2430\tTb927.3.2430\t\tGO:0000910\tPMID:29603841\tIMP\t\tP\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2980\tMCP17\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tMitoferrin\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3730\tTb927.3.3730\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5050\tTb927.3.5050\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR002136\tC\t60S ribosomal protein L4\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5180\tCOF\t\tGO:0046907\tGO_REF:0000024\tISO\tGeneDB:LinJ.29.0520\tP\tADF/Cofilin\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.620\tTb927.3.620\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.780\tTbPSA7\t\tGO:0019538\tPMID:9165063\tTAS\t\tP\tproteasome alpha 7 subunit\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.910\tTUBG\t\tGO:0016049\tPMID:12676092\tIMP\t\tP\ttubulin gamma chain\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1660\tMCP6\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001140\tP\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2630\tTb927.4.2630\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2710\tTb927.4.2710\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3190\tTb927.4.3190\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3460\tTb927.4.3460\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.430\tTb927.4.430\t\tGO:0019538\tPMID:9165063\tTAS\t\tP\tproteasome beta 7 subunit\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4490\tMRPE\t\tGO:0006810\tPMID:11918801\tISS\t\tP\tmultidrug resistance protein E\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1000\tTb927.5.1000\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1550\tMCP23\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1560\tTb927.5.1560\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2090\tKIN2A\t\tGO:0000910\tPMID:32503938\tIMP\t\tP\tkinesin, putative\t\tmRNA\ttaxon:185431\t20220107\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.300\tTLP5\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF03171\tP\tthymine-7-hydroxylase, putative\t\tmRNA\ttaxon:185431\t20100401\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3580\tTb927.5.3580\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001345\tP\tphosphoglycerate mutase protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3600\tTb927.5.3600\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4270\tTb927.5.4270\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4380\tKPP1\t\tGO:0000910\tPMID:29781112\tIMP\t\tP\tKinetoplastid-specific Protein Phosphatase 1\t\tmRNA\ttaxon:185431\t20180816\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4380\tKPP1\t\tGO:0000910\tPMID:29666191\tIMP\t\tP\tKinetoplastid-specific Protein Phosphatase 1\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4420\tTb927.5.4420\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tnucleolar RNA helicase Gu, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.930\tFRDg\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00970\tP\tNADH-dependent fumarate reductase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1260\tPSB1\t\tGO:0019538\tPMID:10498178\tTAS\t\tP\tproteasome beta-1 subunit, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2230\tRGG1\t\tGO:0032774\tPMID:19228586\tIDA\t\tP\tRGG protein\t\tmRNA\ttaxon:185431\t20111215\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2810\tTb927.6.2810\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3100\tIFT46\t\tGO:0000910\tPMID:30030284\tIMP\t\tP\tIntraflagellar transport complex B protein 46 C terminal, putative\t\tmRNA\ttaxon:185431\t20180806\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3280\tTb927.6.3280\t\tGO:0000090\tPMID:15994309\tIMP\t\tP\tcyclosome subunit 1, putative\t\tmRNA\ttaxon:185431\t20200403\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3580\tTb927.6.3580\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H DNA helicase recQ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2230\tTb927.7.2230\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2390\tTAC102\t\tGO:0098798\tPMID:27168148\tIDA\t\tC\tTripartite attachment complex protein 102\t\tmRNA\ttaxon:185431\t20160531\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2540\tTb927.7.2540\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2640\tCAP51\t\tGO:0000910\tPMID:25180513\tIMP\t\tP\tCytoskeleton associated protein 51\t\tmRNA\ttaxon:185431\t20200311\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2650\tCAP51V\t\tGO:0000910\tPMID:25180513\tIMP\t\tP\tCytoskeleton associated protein 51V\t\tmRNA\ttaxon:185431\t20200311\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2970\tTb927.7.2970\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3130\tTZP103\t\tGO:0000910\tPMID:30810527\tIMP\t\tP\tBasalin\t\tmRNA\ttaxon:185431\t20200412\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3330\tFAZ10\t\tGO:0000910\tPMID:28193733\tIMP\t\tP\tFlagellar attachment zone protein 10\t\tmRNA\ttaxon:185431\t20181029\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3550\tWCB\t\tGO:0000910\tPMID:17951107\tIMP\t\tP\tcytoskeleton associated protein, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3940\tMCP16\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4420\tTb927.7.4420\t\tGO:0019538\tPMID:11309374\tISA\tUniProtKB:Q9LE92\tP\tproteasome alpha 3 subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4670\tRRP4\t\tGO:0016049\tPMID:11447124\tIMP\t\tP\tribosomal RNA processing protein 4\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5750\tAP2\t\tGO:0007049\tPMID:23533609\tIMP\t\tP\tAnaphase promoting complex-associated Protein AP2\t\tmRNA\ttaxon:185431\t20180123\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6960\tTb927.7.6960\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tnon-canonical ubiquiting-conjugating enzyme 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6960\tTb927.7.6960\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tnon-canonical ubiquiting-conjugating enzyme 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7300\tTb927.7.7300\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7500\tTLP7\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF03171\tP\tthymine-7-hydroxylase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.920\tIAD5-1\t\tGO:0000910\tPMID:31515877\tIMP\t\tP\tDynein heavy chain, axonemal\t\tmRNA\ttaxon:185431\t20191122\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1160\tTb927.8.1160\t\tGO:0016049\tGO_REF:0000012\tISA\tUniProtKB:AAL55433.1\tP\tvacuolar-type Ca2+-ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1180\tTbA1\t\tGO:0016049\tPMID:14724285\tIMP\t\tP\tvacuolar-type Ca2+-ATPase 1\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1200\tTbA2\t\tGO:0016049\tPMID:14724285\tIMP\t\tP\tvacuolar-type Ca2+-ATPase 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1310\tMCP15\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1510\tDBP2B\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent RNA helicase DBP2B, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1590\tupl3\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000569\tC\tubiquitin-protein ligase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2160\tPGPA\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR003439\tP\tmultidrug resistance protein A\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2210\tPTR1\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002198\tP\tpteridine reductase 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2520\tACS\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR000873\tP\tacetyl-CoA synthetase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2640\tUBA1a\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000127\tP\tubiquitin-activating enzyme E1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2650\tmt-SAF20\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00753\tP\tMitoribosomal SSU assembly factor 20\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3060\tTb927.8.3060\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000819\tC\tcytosolic leucyl aminopeptidase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3330\tMCP18\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3350\tTb927.8.3350\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tDNA polymerase theta (helicase domain only), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3400\tTb927.8.3400\t\tGO:0006810\tPMID:19240115\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 12, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3710\tSNIP\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR006055\tC\t3'-5' exonuclease\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3830\tTb927.8.3830\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3970\tTb927.8.3970\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00107\tP\toxidoreductase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4040\tTb927.8.4040\t\tGO:0006139\tGO_REF:0000011\tISM\tInterPro:IPR001604\tP\tendonuclease G, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4140\tAP3\t\tGO:0007049\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tP\tAnaphase-promoting complex-associated protein AP3\t\tmRNA\ttaxon:185431\t20180123\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4280\tTb927.8.4280\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR002075\tC\tnuclear transport factor 2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4440\tMCP19\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4950\tKLIF\t\tGO:0000910\tPMID:29781112\tIMP\t\tP\tKinesin Localized to the Ingressing Furrow\t\tmRNA\ttaxon:185431\t20180816\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.550\tTb927.8.550\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR002569\tP\tpeptide methionine sulfoxide reductase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5570\tTb927.8.5570\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF03547\tP\ttransporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.570\tRPN10\t\tGO:0016049\tPMID:12213827\tIMP\t\tP\tproteasome regulatory non-ATP-ase subunit 10\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5810\tMCP24\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6030\tTb927.8.6030\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000911\tC\t60S ribosomal protein L12, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6060\tAKCT\t\tGO:0009058\tGO_REF:0000011\tISM\tInterPro:IPR004839\tP\t2-amino-3-ketobutyrate coenzyme A ligase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6090\tTb927.8.6090\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.630\tTb927.8.630\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004143\tP\tlipoate-protein ligase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6390\tTbLysoPLA\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF02230\tP\tlysophospholipase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6410\tKAR3\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002198\tP\tshort-chain dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6510\tUBC12\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6690\tTb927.8.6690\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H DNA helicase recQ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6750\tTCTP1\t\tGO:0000910\tPMID:29661850\tIMP\t\tP\ttranslationally controlled tumor protein (TCTP), putative\t\tmRNA\ttaxon:185431\t20180516\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6750\tTCTP1\t\tGO:0007049\tPMID:30386790\tIMP\t\tP\ttranslationally controlled tumor protein (TCTP), putative\t\tmRNA\ttaxon:185431\t20190215\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6760\tTCTP2\t\tGO:0007049\tPMID:30386790\tIMP\t\tP\ttranslationally-controlled tumor protein homolog, putative\tTMA19\tmRNA\ttaxon:185431\t20190215\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7390\tTb927.8.7390\t\tGO:0009987\tGO_REF:0000012\tISA\tUniProtKB:P37140\tP\tprotein phosphatase 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7530\tTb927.8.7530\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR001753\tP\t3,2-trans-enoyl-CoA isomerase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8170:mRNA\tREMC5A\t\tGO:0032774\tGO_REF:0000002\tIDA\t\tP\tmitochondrial RNA binding protein 1, putative\tMRB8170\tmRNA\ttaxon:185431\t20120905\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8330:mRNA\tCAP5.5V\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001300\tC\tcysteine peptidase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.920\tPEX4\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10170\tAPC11\t\tGO:0007049\tPMID:23533609\tIPI\tGeneDB:Tb927.6.3280\tP\tanaphase-promoting complex subunit 11\tTb09.211.1655\tmRNA\ttaxon:185431\t20180123\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10310\tMCP11\t\tGO:0000910\tPMID:32353560\tIMP\t\tP\tmitochondrial carrier protein 11\tTb09.211.1750\tmRNA\ttaxon:185431\t20200520\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10960\tTb927.9.10960\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb09.211.2300\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11040\tMCP3\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb09.211.2370\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11300\tMRPS17\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000266\tC\tMitochondrial ribosomal protein S17\tuS17m|Tb09.211.2580|Tb927.9.11280\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11500\tAPC2\t\tGO:0007049\tPMID:15994309\tISO\tUniProtKB:Q12440\tP\tanaphase-promoting complex subunit 2\tTb09.211.2660\tmRNA\ttaxon:185431\t20180502\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11900\tmt-SAF36\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00698\tP\tMitoribosomal SSU assembly factor 36\tTb09.211.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12140\tMCP1\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR001993\tP\tmitochondrial carrier protein\tTb09.211.3200|Tb927.9.12120\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12510\tDED1\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00270\tP\tATP-dependent DEAD/H RNA helicase, putative\tTb09.211.3510\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12650\tUBA1b\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000127\tP\tubiquitin-activating enzyme E1, putative\tTb09.211.3610\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12780\tLCM1\t\tGO:0006464\tGO_REF:0000012\tISA\tUniProtKB:Q9UIC8\tP\tJumonji domain protein LCM1\tTb09.211.3730\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12960\tTb927.9.12960\t\tGO:0006810\tGO_REF:0000011\tISM\tInterPro:IPR007114\tP\ttransporter, putative\tTb09.211.3870\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13360\tupl3\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR000569\tC\tubiquitin-protein ligase, putative\tTb09.211.4210\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13610\tTb927.9.13610\t\tGO:0006139\tGO_REF:0000011\tISM\tPfam:PF00271\tP\thelicase, putative\tTb09.211.4430\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1400\tTb927.9.1400\t\tGO:0006725\tGO_REF:0000011\tISM\tInterPro:IPR000733\tP\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb09.160.0390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14000\tTb927.9.14000\t\tGO:0005622\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L12, putative\tTb09.211.4550\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14040\tTb927.9.14040\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002198\tP\tshort-chain dehydrogenase, putative\tTb09.211.4570\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14070\tTb927.9.14070\t\tGO:0008152\tGO_REF:0000011\tISM\tInterPro:IPR002198\tP\tshort-chain dehydrogenase, putative\tTb09.211.4600\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14300\tAZI1\t\tGO:0000910\tPMID:21642507\tIMP\t\tP\t5-azacytidine-induced protein 1, putative\tTb09.211.4830\tmRNA\ttaxon:185431\t20180125\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14600\tTb927.9.14600\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF03171\tP\tiron/ascorbate oxidoreductase family protein, putative\tTb09.211.4990\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.3360\tTb927.9.3360\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00583\tP\tN-acetyltransferase, putative\tTb09.160.2010\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.3970\tPNC1\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00857\tP\tnicotinamidase, putative\tTb09.160.2540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4040\tPNC1\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00857\tP\tnicotinamidase, putative\tTb09.160.2600\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4620\tUBA3\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000127\tP\tubiquitin-activating enzyme E1, putative\tTb09.160.3210\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4680\tEIF4A1\t\tGO:0006139\tPMID:15694484\tISA\t\tP\tEukaryotic initiation factor 4A-1\tTb09.160.3270\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4950\tTb927.9.4950\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF04055\tP\tradical SAM domain protein, putative\tTb09.160.3520\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5040\tPDEB1\t\tGO:0000910\tPMID:29672041\tIMP\t\tP\tcAMP-specific phosphodiesterase\tTb09.160.3590\tmRNA\ttaxon:185431\t20180817\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5170\tTb927.9.5170\t\tGO:0031388\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tTb09.160.3690\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5190\tPCNA\t\tGO:0000084\tPMID:25701409\tIMP\t\tP\tproliferating cell nuclear antigen\tTb09.160.3710\tmRNA\ttaxon:185431\t20200403\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5460\teif4g2\t\tGO:0006139\tPMID:15694484\tISA\t\tP\tEukaryotic translation initiation factor 4 gamma 2\tTb09.160.3980\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5460\teif4g2\t\tGO:0006139\tGO_REF:0000012\tISA\tUniProtKB:IF4G1_HUMAN|UniProtKB:IF4F1_YEAST\tP\tEukaryotic translation initiation factor 4 gamma 2\tTb09.160.3980\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5690\tTb927.9.5690\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001813\tC\t60S acidic ribosomal protein, putative\tTb09.160.4200\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6310\tTb927.9.6310\t\tGO:0006810\tGO_REF:0000011\tISM\tPfam:PF00005\tP\tABC transporter, putative\tTb09.160.4600\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6430\tTb927.9.6430\t\tGO:0043087\tGO_REF:0000011\tISM\tInterPro:IPR002005\tP\tRab geranylgeranyl transferase component A, putative\tTb09.160.4680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6710\tTb927.9.6710\t\tGO:0006725\tGO_REF:0000011\tISM\tInterPro:IPR000733\tP\tflavoprotein monooxygenase, putative\tTb09.160.4910\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7190\tENR1\t\tGO:0008152\tGO_REF:0000011\tISM\tPfam:PF00107\tP\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb09.160.5260\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7540\tTb927.9.7540\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001300\tC\tcalpain-like cysteine peptidase, putative\tTb09.160.5550\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7700\tTb927.9.7700\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:BAC22089\tP\tpalmitoyl acyltransferase 1, putative\tTb09.160.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8000\tTb927.9.8000\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\tTb09.211.0050\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9580\tTb927.9.9580\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004344\tP\ttubulin tyrosine ligase protein, putative\tTb09.211.1170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9960\tKAT80\t\tGO:0000910\tPMID:30171070\tIMP\t\tP\tkatanin P80 subunit, putative\tTb09.211.1500\tmRNA\ttaxon:185431\t20180907\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 } ], "gorule-0000011": [ { "level": "ERROR", "line": "TriTrypDB\tTb927.9.6290\tAK1\t\tGO:0008150\tGO_REF:0000002\tIEA\t\tP\targinine kinase\tTb09.160.4590\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000011: ND annotations to root nodes only", "obj": "", "taxon": "", "rule": 11 } ], "gorule-0000015": [], "gorule-0000016": [ { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4700\tTb927.10.4700\t\tGO:0005789\tGO_REF:0000002\tIC\t\tC\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20100914\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8360\tPARN2\t\tGO:0005634\tPMID:21743004\tIC\t\tC\tPoly(A)-specific ribonuclease PARN-2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0000287\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20110829\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0005524\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20110829\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.960\tTb927.10.960\t\tGO:0008380\tPMID:19429779\tIC\t\tP\tU4/U6-specific protein PRP4\t\tmRNA\ttaxon:185431\t20090514\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1320\tNDHK\t\tGO:0045271\tPMID:21074578\tIC\t\tC\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tTb11.47.0017|NDUFS7|NUKM\tmRNA\ttaxon:185431\t20101124\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0000287\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20110829\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0005524\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20110829\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0005737\tPMID:10867008\tIC\t\tC\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20090407\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4020\tTb927.3.4020\t\tGO:0005829\tGO_REF:0000002\tIC\t\tC\tphosphatidylinositol 4-kinase alpha, putative\t\tmRNA\ttaxon:185431\t20100816\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1140\tTb927.4.1140\t\tGO:0005829\tGO_REF:0000002\tIC\t\tC\tphosphatidylinositol 4-kinase, putative\t\tmRNA\ttaxon:185431\t20100816\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.450\tNUBM\t\tGO:0045271\tPMID:21074578\tIC\t\tC\tNADH-ubiquinone oxidoreductase, mitochondrial, putative\tNDUFV1\tmRNA\ttaxon:185431\t20101124\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.700\tTbPIF7\t\tGO:0000287\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF7\t\tmRNA\ttaxon:185431\t20110829\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.700\tTbPIF7\t\tGO:0008026\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF7\t\tmRNA\ttaxon:185431\t20110829\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15380\tNDUFA9\t\tGO:0045271\tPMID:21074578\tIC\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tTb09.244.2620\tmRNA\ttaxon:185431\t20101124\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000016: All IC annotations should include a GO ID in the \"With/From\" column that is also different from the entry in the \"GO ID\" column", "obj": "", "taxon": "", "rule": 16 } ], "gorule-0000017": [], "gorule-0000018": [ { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:0032991\tPMID:35447115\tIPI\t\tC\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2150\tMCUd\t\tGO:1990246\tPMID:30228243\tIPI\t\tC\tmitochondrial calcium uniporter\t\tmRNA\ttaxon:185431\t20190114\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5080\tTTA2\t\tGO:0042765\tPMID:12958211\tIPI\t\tC\tGPI transamidase component Tta2\t\tmRNA\ttaxon:185431\t20100112\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5110\tKREPA4\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPA4\tMP24\tmRNA\ttaxon:185431\t20100205\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5120\tKREPA6\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPA6\tMP18\tmRNA\ttaxon:185431\t20100205\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5320\tKREN3\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tRNA editing endoribonuclease\tMP67|KREPB2|REN3\tmRNA\ttaxon:185431\t20100205\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5440\tKREN2\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tRNA editing endoribonuclease\tMP61|REN2\tmRNA\ttaxon:185431\t20100205\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8210\tKREPA2\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPA2\tMP63\tmRNA\ttaxon:185431\t20100205\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.960\tTb927.10.960\t\tGO:0030627\tPMID:20581293\tIPI\t\tF\tU4/U6-specific protein PRP4\t\tmRNA\ttaxon:185431\t20100927\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11150\tU5-40K\t\tGO:0030627\tPMID:20581293\tIPI\t\tF\tU5 snRNP-specific 40 kDa protein\tTb11.01.2940\tmRNA\ttaxon:185431\t20100927\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2990\tKREPB4\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPB4\tTb11.02.0490|MP46\tmRNA\ttaxon:185431\t20100208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.940\tKREPB5\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPB5\tTb11.03.0180|MP44\tmRNA\ttaxon:185431\t20100208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2470\tKREPA1\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKinetoplastid RNA editing protein 1\tMP81|25N14.30\tmRNA\ttaxon:185431\t20100205\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3990\tKREPB6\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPB6\tMP49\tmRNA\ttaxon:185431\t20100208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2960\tMED-T8\t\tGO:0016592\tPMID:20876299\tIPI\t\tC\tmediator of rna polymerase ii transcription subunit 8\t\tmRNA\ttaxon:185431\t20171009\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.600\tCAF1\t\tGO:0008143\tPMID:18442996\tIPI\t\tF\tccr4-not transcription complex subunit\t\tmRNA\ttaxon:185431\t20100329\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1070\tKREX1\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREX1\tMP100|KREPC1|REX1\tmRNA\ttaxon:185431\t20100208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1470\tATPc3\t\tGO:0005515\tPMID:32184243\tIPI\t\tF\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20200625\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1470\tATPc3\t\tGO:0005739\tPMID:32184243\tIPI\t\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20200625\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1550\tKRET2\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKRET2\tMP57|RET2\tmRNA\ttaxon:185431\t20100208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1960\tCNOT11\t\tGO:0005634\tPMID:18442996\tIPI\t\tC\tCCR4-NOT transcription complex subunit 11\t\tmRNA\ttaxon:185431\t20100329\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1960\tCNOT11\t\tGO:0005737\tPMID:18442996\tIPI\t\tC\tCCR4-NOT transcription complex subunit 11\t\tmRNA\ttaxon:185431\t20100329\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5690\tKREPB8\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPB8\tMP41\tmRNA\ttaxon:185431\t20100208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.620\tKREPA3\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPA3\tMP42\tmRNA\ttaxon:185431\t20100205\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.680\tKREPA5\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPA5\tMP19\tmRNA\ttaxon:185431\t20100205\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4360\tKREL1\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tRNA-editing ligase 1, mitochondrial\tTb09.160.2970|REL1|MP52\tmRNA\ttaxon:185431\t20100208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5630\tKREPB7\t\tGO:0031019\tPMID:20018860\tIPI\t\tC\tKREPB7\tTb09.160.4130|MP47\tmRNA\ttaxon:185431\t20100208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000018: IPI annotations require a With/From entry", "obj": "", "taxon": "", "rule": 18 } ], "gorule-0000022": [], "gorule-0000026": [], "gorule-0000028": [], "gorule-0000029": [], "gorule-0000030": [], "gorule-0000037": [], "gorule-0000039": [], "gorule-0000042": [], "gorule-0000043": [], "gorule-0000046": [ { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13040\tACP4\t\tGO:0042803\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.16190|GeneDB:Tb927.11.17040\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0042803\tPMID:25681612\tIDA\t\tF\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20150708\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0042803\tPMID:24879126\tIDA\t\tF\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20150604\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0042803\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.16190|GeneDB:Tb927.11.17040\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0042803\tPMID:24879126\tIDA\t\tF\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20150604\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.810\tZC3H11\tNOT\tGO:0042803\tPMID:23592996\tIDA\t\tF\tzinc finger CCCH domain containing protein 11\t\tmRNA\ttaxon:185431\t20150612\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7470\tACP3\t\tGO:0042803\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.16190|GeneDB:Tb927.11.17040\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2380\tABCG5\t\tGO:0042803\tPMID:21255121\tISO\tGeneDB:LinJ.23.0430\tF\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20110131\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15660\tACP6\t\tGO:0042803\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.16190|GeneDB:Tb927.11.17040\tF\tprocyclic-enriched flagellar receptor adenylate cyclase 6\tTb09.244.2380|GRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 } ], "gorule-0000050": [], "gorule-0000055": [ { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390\tGRBC4\t\tGO:0005739\tPMID:20660476|PMID:18073385\tISS\t\tC\tmRNA processing protein, putative\tNCDS.Tb927.11.7452|MRB5390\tmRNA\ttaxon:185431\t20130725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390b\tTb11.02.5390b\t\tGO:0005739\tPMID:20660476|PMID:18073385\tISO\tGeneDB:Tb11.02.5390\tC\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20130725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2150\tSKCRP1-4\t\tGO:0005737\tPMID:16315106|PMID:19766148\tIDA\t\tC\tcalpain-like cysteine peptidase, Clan CA, family C2\t\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1170\tIFT172\t\tGO:0031514\tPMID:18094047|PMID:24741115\tIDA\t\tC\tintraflagellar transport protein 172\t\tmRNA\ttaxon:185431\t20150813\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14010\trp2\t\tGO:0036064\tPMID:17645436|PMID:24257747\tIDA\t\tC\ttubulin cofactor C domain-containing protein RP2\t\tmRNA\ttaxon:185431\t20140423\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14010\trp2\t\tGO:0097537\tPMID:17645436|PMID:24257747\tIDA\t\tC\ttubulin cofactor C domain-containing protein RP2\t\tmRNA\ttaxon:185431\t20140423\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14360\tU2_40K\t\tGO:0003729\tPMID:8458336|PMID:1833773\tIDA\t\tF\tU2 small nuclear ribonucleoprotein 40K\tU2A\tmRNA\ttaxon:185431\t20130822\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14360\tU2_40K\t\tGO:0005686\tPMID:8458336|PMID:1833773\tIDA\t\tC\tU2 small nuclear ribonucleoprotein 40K\tU2A\tmRNA\ttaxon:185431\t20130822\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3570\tKREX2\t\tGO:0031019\tPMID:20018860|PMID:12649499\tIDA\t\tC\tRNA editing exonuclease 2\tMP99|REX2\tmRNA\ttaxon:185431\t20140528\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4610\tDPMS\t\tGO:0004582\tPMID:10329621|PMID:19497128\tISO\tGeneDB:LmjF.36.0220\tF\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20090930\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4610\tDPMS\t\tGO:0006506\tPMID:10329621|PMID:11689705\tISO\tGeneDB:LmjF.36.0220\tP\tdolicholphosphate-mannose synthase, putative\t\tmRNA\ttaxon:185431\t20090930\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0000281\tPMID:24453978|PMID:24213350\tIMP\t\tP\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20160726\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0042802\tPMID:10029305|PMID:11279035\tIDA\t\tF\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.840\tFAZ6\t\tGO:0005929\tPMID:25736289|PMID:27226595\tIDA\t\tC\tFlagellum attachment zone protein 6\t\tmRNA\ttaxon:185431\t20160603\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0005634\tPMID:10562569|PMID:15694344|PMID:17389644\tIDA\t\tC\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20160126\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0070580\tPMID:22514282|PMID:17389644|PMID:19136460|PMID:PMID:15694344\tIMP\t\tP\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20160126\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15580\tTFL2\t\tGO:0005634\tPMID:28727848|PMID:29186511\tIDA\t\tC\tTFIIF-like transcription factor subunit 2\tTb11.01.7220\tmRNA\ttaxon:185431\t20170912\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0004016\tPMID:1545803|PMID:24879126\tIGI\tUniProtKB:CYAA_YEAST\tF\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0005929\tPMID:1545803|PMID:24879126\tIDA\t\tC\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4700\tTb927.11.4700\t\tGO:0019571\tPMID:17320480|PMID:19497128\tTAS\t\tP\tprostaglandin f synthase\tTb11.02.2310\tmRNA\ttaxon:185431\t20091019\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4700\tTb927.11.4700\t\tGO:0045290\tPMID:17320480|PMID:19497128\tTAS\t\tF\tprostaglandin f synthase\tTb11.02.2310\tmRNA\ttaxon:185431\t20091019\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0004175\tPMID:11854272|PMID:12213827\tISS\t\tF\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0005838\tPMID:11854272|PMID:12213827\tISS\t\tC\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0043161\tPMID:11854272|PMID:12213827\tISS\t\tP\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3880\tHNRNPH/F\t\tGO:0003729\tPMID:26784394|PMID:23666624\tIDA\t\tF\theterogeneous nuclear ribonucleoproteins F/H homologue\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2190\tCET1\t\tGO:0016887\tPMID:11553645|PMID:14525979\tIDA\t\tF\tCapping enzyme RNA triphosphatase 1\t\tmRNA\ttaxon:185431\t20160721\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5250\tZC3H8\t\tGO:0010608\tPMID:24945722|PMID:26784394\tIDA\t\tP\tZinc finger CCCH domain-containing protein 8\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1630\tRRP6\t\tGO:0000177\tPMID:11447124|PMID:17118470\tIDA\t\tC\tribosomal RNA processing protein 6\t\tmRNA\ttaxon:185431\t20170515\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1630\tRRP6\t\tGO:0005634\tPMID:17118470|PMID:26946399\tIDA\t\tC\tribosomal RNA processing protein 6\t\tmRNA\ttaxon:185431\t20170515\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4150\tMRB4150\t\tGO:0003723\tPMID:22396527|PMID:22396527\tIDA\t\tF\tmitochondrial RNA binding complex 1 subunit MRB4150\t\tmRNA\ttaxon:185431\t20120910\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4150\tMRB4150\t\tGO:0016554\tPMID:22396527|PMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit MRB4150\t\tmRNA\ttaxon:185431\t20120910\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4150\tMRB4150\t\tGO:0048255\tPMID:22396527|PMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit MRB4150\t\tmRNA\ttaxon:185431\t20120910\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2080\tGMPR\t\tGO:0020015\tPMID:24792668|PMID:26731263\tIDA\t\tC\tGMP reductase\tIMPDH2\tmRNA\ttaxon:185431\t20160725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3830\tPYR4\t\tGO:0006106\tPMID:16600626|PMID:19497128\tISO\tGeneDB:LmjF.16.0530\tP\tdihydroorotate dehydrogenase (fumarate)\tDHODH\tmRNA\ttaxon:185431\t20091020\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2080\tCGM1\t\tGO:0036260\tPMID:17416901|PMID:17949828\tIMP\t\tP\tRNA capping enzyme, nuclear\t\tmRNA\ttaxon:185431\t20150714\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4900\tXRNA\t\tGO:0006402\tPMID:21947264|PMID:17077271\tIMP\t\tP\t5'-3' exoribonuclease A\tXRN1|KEM\tmRNA\ttaxon:185431\t20150318\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5700\tpATOM36\t\tGO:0005741\tPMID:23221899|PMID:22787278\tIDA\t\tC\tperipherally associated ATOM36\t\tmRNA\ttaxon:185431\t20160725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5900\tATG8.1\t\tGO:0000407\tPMID:22463696|PMID:24699810\tIDA\t\tC\tATG8/AUT7/APG8/PAZ2, putative\tATG8A\tmRNA\ttaxon:185431\t20150706\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5900\tATG8.1\t\tGO:0005737\tPMID:22463696|PMID:24699810\tIDA\t\tC\tATG8/AUT7/APG8/PAZ2, putative\tATG8A\tmRNA\ttaxon:185431\t20150706\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5910\tATG8.2\t\tGO:0000407\tPMID:22463696|PMID:24699810\tIDA\t\tC\tAutophagy-related protein 8.2\tATG8B\tmRNA\ttaxon:185431\t20150706\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5910\tATG8.2\t\tGO:0005737\tPMID:22463696|PMID:24699810\tIDA\t\tC\tAutophagy-related protein 8.2\tATG8B\tmRNA\ttaxon:185431\t20150706\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5920\tMST\t\tGO:0016784\tPMID:12419809|PMID:19497128\tISO\tGeneDB:LmjF.05.0970\tF\tmercaptopyruvate sulfurtransferase, putative\t\tmRNA\ttaxon:185431\t20091009\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1870\tGLP1\t\tGO:0005794\tPMID:25503798|PMID:10462522\tIDA\t\tC\tGolgi/lysosome glycoprotein 1\t\tmRNA\ttaxon:185431\t20150226\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4980\tPFR2-2\t\tGO:0005929\tPMID:2793936|PMID:9468133\tIDA\t\tC\tParaflagellar rod protein B\tPFRB\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4990\tPFR2-3\t\tGO:0005929\tPMID:2793936|PMID:9468133\tIDA\t\tC\tParaflagellar rod protein 2-3\tPFRA\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5000\tPFR2-4\t\tGO:0005929\tPMID:2793936|PMID:9468133\tIDA\t\tC\tParaflagellar rod protein 2-4\tPFRA\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5010\tPFR2-5\t\tGO:0005929\tPMID:2793936|PMID:9468133\tIDA\t\tC\tParaflagellar rod protein 2-5\tPFRA\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6070\tTBBC\t\tGO:0036064\tPMID:10574716|PMID:18094047|PMID:17487282\tIDA\t\tC\tML protein\t\tmRNA\ttaxon:185431\t20150803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13785\tKMP11-5\t\tGO:0036064\tPMID:18820079|PMID:18545648\tIDA\t\tC\tkinetoplastid membrane protein 11-5\tNCDS.Tb927.9.13775\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13795\tKMP11-4\t\tGO:0036064\tPMID:18820079|PMID:18545648\tIDA\t\tC\tkinetoplastid membrane protein 11-4\tNCDS.Tb927.9.13785|Tb927.9.13810\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13820\tKMP11-3\t\tGO:0036064\tPMID:18820079|PMID:18545648\tIDA\t\tC\tkinetoplastid membrane protein 11-3\tTb09.211.4511\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13860\tKMP11-2\t\tGO:0036064\tPMID:18820079|PMID:18545648\tIDA\t\tC\tkinetoplastid membrane protein 11-2\tTb09.211.4512|Tb927.9.13880\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13920\tKMP11-1\t\tGO:0036064\tPMID:18820079|PMID:18545648\tIDA\t\tC\tkinetoplastid membrane protein 11-1\tTb09.211.4513\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 } ], "gorule-0000058": [], "gorule-0000061": [ { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420b\tTb11.02.5420b\t\tGO:0016021\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5420\tC\tNADPH-cytochrome p450 reductase, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.05\tTb927.1.05\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2040\tTb927.1.2040\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4100\tCOXIV\t\tGO:0005751\tPMID:12467979\tISO\tGeneDB:LtaP12.0690\tC\tcytochrome oxidase subunit IV\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4870\tTb927.1.4870\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4890\tTb927.1.4890\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4900\tTb927.1.4900\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4910\tTb927.1.4910\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5080\tTb927.1.5080\t\tGO:0016021\tPMID:1672441\tTAS\t\tC\texpression site-associated gene 9 (ESAG9) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5100\tTb927.1.5100\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5110\tTb927.1.5110\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5120\tTb927.1.5120\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5170\tTb927.1.5170\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5200\tTb927.1.5200\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5220\tTb927.1.5220\t\tGO:0016021\tPMID:1672441\tTAS\t\tC\texpression site-associated gene 9 (ESAG9) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5240\tTb927.1.5240\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5300\tTb927.1.5300\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5330\tTb927.1.5330\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.730\tTb927.1.730\t\tGO:0005747\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20140725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11910\tTb927.10.11910\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR007114\tC\tmajor facilitator superfamily, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11980\tTb927.10.11980\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9GU66_DROME\tC\tQA-SNARE protein putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13580\tTb927.10.13580\t\tGO:0016021\tGO_REF:0000002\tISM\tInterPro:IPR011701\tC\tmajor facilitator superfamily protein (MFS), putative\t\tmRNA\ttaxon:185431\t20140919\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15130\tSEC22\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:P22214\tC\tVesicle-trafficking protein SEC22, putative\tSLY2\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0000276\tPMID:19436713\tIDA\t\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0005753\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15850\tPEX12\t\tGO:0016021\tPMID:17188680\tIDA\t\tC\tperoxin 12\t\tmRNA\ttaxon:185431\t20110510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16160\tTb927.10.16160\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0005747\tPMID:21610103\tIDA\t\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20141016\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2230\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20141016\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2430\tTb927.10.2430\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4280\tTb927.10.4280\t\tGO:0005750\tPMID:21610103\tIDA\t\tC\tubiquinol-cytochrome c reductase complex 14 kda protein\t\tmRNA\ttaxon:185431\t20170606\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0005947\tGO_REF:0000012\tISA\tUniProtKB:P21953\tC\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4370\tTb927.10.4370\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5050\tTb927.10.5050\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tmitochondrial ATP synthase epsilon chain\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5050\tTb927.10.5050\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tmitochondrial ATP synthase epsilon chain\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.690\tTb927.10.690\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7140\tMBAP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmembrane-bound acid phosphatase 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7180\tCRAM\t\tGO:0016021\tPMID:1697030\tTAS\t\tC\tcysteine-rich, acidic integral membrane protein precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0005967\tGO_REF:0000012\tISA\tUniProtKB:P08461\tC\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.790\tTb927.10.790\t\tGO:0016021\tGO_REF:0000024\tISS\t\tC\tvesicle-associated membrane protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8030\tATP5\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit 5\tOSCP\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8440\tTHT1-\t\tGO:0016021\tPMID:8423781\tTAS\t\tC\tglucose transporter 1B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8450\tTHT1E\t\tGO:0016021\tPMID:8423781\tTAS\t\tC\tglucose transporter 1E\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8530\tTHT2A\t\tGO:0016021\tPMID:8423781\tTAS\t\tC\tglucose transporter 2A\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9300\tTb927.10.9300\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR004254\tC\tadiponectin receptor protein 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9310\tTb927.10.9310\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR004254\tC\tHaemolysin-III related, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9470\tTb927.10.9470\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9480\tTb927.10.9480\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9490\tTb927.10.9490\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 3 (ESAG3)-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9500\tTb927.10.9500\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9830\tTb927.10.9830\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.100\tTb927.11.100\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.51.0005\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1010\tJ18\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb11.03.0110\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10450\tTb927.11.10450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative\tTb11.01.2220\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10980\tTb927.11.10980\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGot1/Sft2-like family, putative\tTb11.01.2770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11720\tTb927.11.11720\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFG-GAP repeat protein, putative\tTb11.01.3590\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12270\tTb927.11.12270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tdrug resistence protein, putative\tTb11.01.4090\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1270\tTb927.11.1270\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.47.0022\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1300\tTb927.11.1300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUBA/TS-N domain containing protein, putative\tTb11.47.0019\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13000\tTb927.11.13000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphospholipid-transporting ATPase, putative\tTb11.52.0018\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13130\tMBAP1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmembrane-bound acid phosphatase 1 precursor\tTb11.01.4701\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13600\tJ60\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.01.5190\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13830\tJ63\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.01.5390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.140\tTb927.11.140\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.03.0990\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140218\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0016021\tGO_REF:0000002\tISS\t\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14620\tTb927.11.14620\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\tTb11.01.6230|NCDS.Tb927.11.14611\tmRNA\ttaxon:185431\t20090310\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1470\tTb927.11.1470\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t65 kDa invariant surface glycoprotein-like protein\tTb11.47.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14730\tFtsH14\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tMetalloprotease M41 FtsH, putative\tTb11.01.6360\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1480\tTb927.11.1480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.27.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14910\tTb927.11.14910\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein phosphatase 2C, putative\tTb11.01.6540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.150\tTb927.11.150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.03.0970\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15150\tTb927.11.15150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t1-acyl-sn-glycerol-3-phosphate acyltransferase, putative\tTb11.01.6800\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1520\tTb927.11.1520\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 3 (ESAG3) protein, putative\tTb11.55.0028\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1530\tTb927.11.1530\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 3 (ESAG3) protein, putative\tTb11.55.0027\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15330\tTb927.11.15330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphatidylinositol 3-kinase catalytic subunit, putative\tTb11.01.6980\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15440\tTAP151\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15810\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.7090|LIR\tmRNA\ttaxon:185431\t20141210\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15530\tTb927.11.15530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tC-14 sterol reductase, putative\tTb11.01.7170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15760\tTTA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGPI transamidase subunit Tta1\tTb11.01.7400\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15920\tTb927.11.15920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglutathione peroxidase, putative\tTb11.01.7560\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15950\tTb927.11.15950\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\tTb11.01.7590\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15960\tTb927.11.15960\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\tTb11.01.7600\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16110\tTb927.11.16110\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tintegrin alpha chain protein, putative\tTb11.01.7770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16220\tTb927.11.16220\t\tGO:0005750\tPMID:21610103\tIDA\t\tC\tCytochrome b-c1 complex subunit, putative\tTb11.01.7900\tmRNA\ttaxon:185431\t20170606\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16240\tTb927.11.16240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\tTb11.01.7920\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16630\tTb927.11.16630\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmajor facilitator superfamily, putative\tTb11.01.8350\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0016021\tPMID:11152613|GO_REF:0000011\tISM\tInterPro:IPR001140\tC\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17190\tTb927.11.17190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0035\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17320\tTb927.11.17320\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0024\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17370\tTb927.11.17370\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0019\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17580\tTb927.11.17580\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.21.0004\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17720\tTb927.11.17720\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.24.0007\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17770\tTb927.11.17770\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.24.0012\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17890\tTb927.11.17890\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\tTb11.17.0002\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1790\tTb927.11.1790\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.55.0001\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1800\tTb927.11.1800\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.39.0008\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1860\tTb927.11.1860\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0007\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1870\tTb927.11.1870\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0006\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1880\tTb927.11.1880\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0005\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19520\tTb927.11.19520\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0084\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19540\tTb927.11.19540\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.57.0052\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19620\tTb927.11.19620\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, pseudogene), putative\tTb11.32.0002\tpseudogenic_transcript\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19870\tTb927.11.19870\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.35.0001\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20090\tTb927.11.20090\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0007\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20100\tTb927.11.20100\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0008\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20190\tTb927.11.20190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.14.0015\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20240\tTb927.11.20240\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0019\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20550\tTb927.11.20550\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.09.0003\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20700\tTb927.11.20700\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.38.0005\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20730\tTb927.11.20730\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tglycerophosphoryl diester phosphodiesterase, putative\tTb11.01.0580\tmRNA\ttaxon:185431\t20120524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2210\tTb927.11.2210\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tdiacylglycerol acyltransferase, putative\tTb11.18.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2230\tCAT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcarnitine O-acetyltransferase, putative\tTb11.18.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2330\tTb927.11.2330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmolybdopterin synthase sulphurylase protein, putative\tTb11.22.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3130\tGAT2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglycosomal transporter (GAT2)\tTb11.02.0630\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3350\tTb927.11.3350\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphospholipid-transporting ATPase 1-like protein, putative\tTb11.02.0850\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3470\tTb927.11.3470\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tendosomal integral membrane protein, putative\tTb11.02.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3620\tNT8.2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tnucleobase/nucleoside transporter 8.2\tTb11.02.1105|NBT2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3630\tNT8.3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tnucleobase/nucleoside transporter 8.3\tTb11.02.1106|NBT3\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.370\tRAP1\t\tGO:0000784\tPMID:19345190\tEXP\t\tC\trepressor activator protein 1\tTb11.03.0760\tmRNA\ttaxon:185431\t20090417\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3750\tB5R\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNADH-cytochrome b5 reductase, putative\tTb11.02.1230\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4200\tTb927.11.4200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmannose-specific lectin, putative\tTb11.02.1680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4220\tPAT6\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 6, putative\tTb11.02.1710\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.440\tTb927.11.440\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tconserved protein\tTb11.03.0700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4430\tFR1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tferric reductase transmembrane protein, putative\tTb11.02.1990\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15810|GeneDB:Tb927.11.15440\tC\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20141203\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4850\tTb927.11.4850\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.2460\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0000276\tPMID:19436713\tIDA\t\tC\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0005753\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tC\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5350\tHMIT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmyo-inositol/proton symporter (MIT)\tTb11.02.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.570\tTb927.11.570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.03.0510\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5710\tJ29\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb11.02.3430\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5940\tTb927.11.5940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.02.3740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.600\tTb927.11.600\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.03.0475\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6040\tTb927.11.6040\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNodulin-like, putative\tTb11.02.3860\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6250\tTb927.11.6250\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.02.4120\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6570\tTb927.11.6570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNodulin-like, putative\tTb11.02.4420\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6680\tTb927.11.6680\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid permease/transporter, putative\tTb11.02.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7000\tTb927.11.7000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.4850\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7300\tTb927.11.7300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmajor facilitator superfamily, putative\tTb11.02.5200\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7360\tTb927.11.7360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 9, putative\tTb11.02.5260\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7490\tTb927.11.7490\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.02.5480\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7500\tTb927.11.7500\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.02.5490\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7800\tTb927.11.7800\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.5680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8060\tTb927.11.8060\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSNARE associated Golgi protein, putative\tTb11.01.0480\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8380\tCPR\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNADPH--cytochrome P450 reductase, putative\tTb11.01.0170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8740\tTb927.11.8740\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.12.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8790\tTb927.11.8790\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttarget SNARE, putative\tTb11.12.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8820\tTb927.11.8820\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglutathionylspermidine synthetase, putative\tTb11.12.0016\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0016021\tPMID:20833891\tIDA\t\tC\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9000\tTb927.11.9000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0725\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9010\tTb927.11.9010\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0730\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9020\tTb927.11.9020\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9030\tTb927.11.9030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9130\tRPA1\t\tGO:0000784\tGO_REF:0000024\tISO\tUniProtKB:Q5MY89\tC\tReplication factor A protein 1\tTb11.01.0870\tmRNA\ttaxon:185431\t20160802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0005747\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20120821\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2720\tFlaK\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE/STE7 protein kinase, putative\tMEKK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3370\tTb927.2.3370\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3610\tTb927.2.3610\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4760\tTb927.2.4760\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4830\tTb927.2.4830\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4920\tTb927.2.4920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5290\tTb927.2.5290\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5300\tTb927.2.5300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5310\tTb927.2.5310\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5320\tTb927.2.5320\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5330\tTb927.2.5330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5340\tTb927.2.5340\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5350\tTb927.2.5350\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5360\tTb927.2.5360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5410\tTb927.2.5410\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter family-like protein\t1F7.75\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6130\tTb927.2.6130\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6150\tTbNT2/927\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6200\tTbNT3\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6220\tTbNT4\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6240\tTbNT5\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6280\tTbNT7\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6320\tTbNT6\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6410\tTb927.2.6410\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1380\tATPB\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tATP synthase subunit beta, mitochondrial\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1380\tATPB\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tATP synthase subunit beta, mitochondrial\t\tmRNA\ttaxon:185431\t20141208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.150\tTb927.3.150\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1500\tTb927.3.1500\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1510\tTb927.3.1510\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tC\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1690\tTb927.3.1690\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.180\tTb927.3.180\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.190\tTb927.3.190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.210\tTb927.3.210\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2180\tTb927.3.2180\t\tGO:0005753\tPMID:194367139\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2400\tTb927.3.2400\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 10, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2610\tGPIdeAc2\t\tGO:0016021\tPMID:16510441\tISM\t\tC\tGPI inositol deacylase 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2820\tTb927.3.2820\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2880\tTb927.3.2880\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.340\tTb927.3.340\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3490\tTDP1\t\tGO:1902377\tPMID:23361461\tIDA\t\tC\tTrypanosome DNA binding protein 1\tHMGB\tmRNA\ttaxon:185431\t20170823\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3660\tTb927.3.3660\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.7.7330\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20141219\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.370\tTb927.3.370\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3730\tTb927.3.3730\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4220\tTb927.3.4220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tZn-finger domain protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.440\tTb927.3.440\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.490\tTb927.3.490\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4920\tTb927.3.4920\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507951.270\tC\tLETM1 and EF-hand domain-containing protein 1, putative\t\tmRNA\ttaxon:185431\t20120524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5030\tKU70\t\tGO:0000784\tPMID:11919193\tIC\tGO:0000722\tC\tKU70 protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5650\tTb927.3.5650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5660\tGnTI\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-GlcNAc:alpha3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I\tGT11\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.590\tAT-E\t\tGO:0016021\tPMID:10398598\tTAS\t\tC\tadenosine transporter, putative\tNT12\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.710\tTb927.3.710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.860\tACP\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15440\tC\tMitoribosomal SSU assembly factor 32\tmt-LAF11|mt-SAF32|NDUFAB1\tmRNA\ttaxon:185431\t20141210\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2500\tEIF2AK2\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9NIV1\tC\teukaryotic translation initiation factor 2-alpha kinase 2\tK2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0016021\tPMID:11152613|GO_REF:0000024\tISS\tUniProtKB:MRP1_MOUSE\tC\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3190\tTb927.4.3190\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3450\tTb927.4.3450\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3750\tTb927.4.3750\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3860\tTb927.4.3860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3870\tTb927.4.3870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3880\tTb927.4.3880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3930\tTb927.4.3930\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4020\tAAT2-4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tOrnithine/histidine transporter AAT2-4\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4250\tTb927.4.4250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4270\tTb927.4.4270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4290\tTb927.4.4290\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.440\tTb927.4.440\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15810\tC\tNADH:ubiquinone oxidoreductase, ESSS subunit, putative\t\tmRNA\ttaxon:185431\t20150127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4410\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4430\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4440\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4450\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4460\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4470\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4490\tMRPE\t\tGO:0016021\tGO_REF:0000011\tISM\tPfam:PF00664\tC\tmultidrug resistance protein E\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4830\tTb927.4.4830\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4850\tTb927.4.4850\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4870\tTb927.4.4870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4880\tTb927.4.4880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5240\tTb927.4.5240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5250\tTb927.4.5250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5260\tTb927.4.5260\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5270\tTb927.4.5270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5290\tTb927.4.5290\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5400\tTb927.4.5400\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5410\tTb927.4.5410\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5420\tTb927.4.5420\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5430\tTb927.4.5430\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5460\tTb927.4.5460\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5530\tTb927.4.5530\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5560\tTb927.4.5560\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5580\tTb927.4.5580\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5700\tTb927.4.5700\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.650\tJ19\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1450\tTb927.5.1450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1710\tP18\t\tGO:0000276\tPMID:19436713\tIPI\tGeneDB:Tb927.5.1710\tC\tATP synthase F1 subunit p18, mitochondrial\t\tmRNA\ttaxon:185431\t20170518\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.230\tTb927.5.230\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2760\tTb927.5.2760\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3090\tTb927.5.3090\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3150\tTb927.5.3150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein kinase , putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.320\tTb927.5.320\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb927.5.320b\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.330\tTb927.5.330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb927.5.330b\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3320\tTb927.5.3320\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPseudokinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3880\tTb927.5.3880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4540\tTb927.5.4540\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4550\tTb927.5.4550\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4670\tTb927.5.4670\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4690\tTb927.5.4690\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4730\tTb927.5.4730\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4770\tTb927.5.4770\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4810\tTb927.5.4810\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4840\tTb927.5.4840\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4950\tTb927.5.4950\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.5050\tTb927.5.5050\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.5080\tTb927.5.5080\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.520\tTb927.5.520\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR001107\tC\tstomatin-like protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.5240\tTb927.5.5240\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.650\tTb927.5.650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.170\tTb927.6.170\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.180\tTb927.6.180\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q99279\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.190\tTb927.6.190\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.200\tTb927.6.200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.220\tTbNT9\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tpurine nucleoside transporter\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2490\tSDH7\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.509053.140\tC\tsuccinate dehydrogenase subunit 7\t\tmRNA\ttaxon:185431\t20170511\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2710\tTb927.6.2710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tE3 ubiquitin-protein ligase HEL2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.280\tTb927.6.280\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2810\tTb927.6.2810\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.300\tTb927.6.300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.310\tTb927.6.310\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.330\tTb927.6.330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.370\tTb927.6.370\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3730\tJ38\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.380\tTb927.6.380\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4130\tSDH3\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511523.14\tC\tsuccinate dehydrogenase subunit 3\t\tmRNA\ttaxon:185431\t20170511\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.430\tTb927.6.430\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.450\tTb927.6.450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tEP3-2 procyclin\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.460\tPAG3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin associated gene 3 (PAG3) protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.480\tTb927.6.480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tEP3-2 procyclin\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.490\tPAG3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin associated gene 3 (PAG3) protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4990\tTb927.6.4990\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tmitochondrial ATP synthase delta chain\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4990\tTb927.6.4990\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tmitochondrial ATP synthase delta chain\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.510\tGPEET\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin A-alpha\tparpA-alpha\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.520\tEP3-2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tsurface protein EP3-3 procyclin precursor\tparpA-beta\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5240\tTb927.6.5240\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5260\tTb927.6.5260\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.530\tPAG3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin associated gene 3 (PAG3) protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5370\tTb927.6.5370\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5450\tTb927.6.5450\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5550\tTb927.6.5550\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5740\tTb927.6.5740\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.760\tTb927.6.760\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.770\tTb927.6.770\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.780\tTb927.6.780\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.790\tTb927.6.790\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.800\tTb927.6.800\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.100\tTb927.7.100\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative (fragment)\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1470\tATPc3\t\tGO:0000276\tPMID:23326569\tIDA\t\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2230\tTb927.7.2230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5220\tTb927.7.5220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tForkhead Kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5230\tTb927.7.5230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tlanosterol synthase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6040\tTb927.7.6040\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6050\tTb927.7.6050\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6060\tTb927.7.6060\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6070\tTb927.7.6070\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6080\tTb927.7.6080\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6200\tJ26\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6500\tTb927.7.6500\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6540\tTb927.7.6540\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6660\tJ10\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.740\tJ28\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7420\tATPF1A\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tATP synthase alpha chain, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7420\tATPF1A\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tATP synthase alpha chain, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7430\tATPF1A\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tATP synthase alpha chain, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7430\tATPF1A\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tATP synthase alpha chain, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7470\tACP3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7520\tTb927.7.7520\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7530\tTb927.7.7530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.840\tTb927.7.840\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1030\tTb927.8.1030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1160\tTb927.8.1160\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tvacuolar-type Ca2+-ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1180\tTbA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tvacuolar-type Ca2+-ATPase 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.130\tTb927.8.130\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1310\tMCP15\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1650\tTb927.8.1650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein Associated with Differentiation, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.170\tTb927.8.170\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1810\tTb927.8.1810\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\trhomboid-like protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1890\tCYC1\t\tGO:0005746\tGO_REF:0000011\tISM\tInterPro:IPR002326\tC\tcytochrome c1, heme protein, mitochondrial, putative\tCYT1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1940\tTb927.8.1940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tendosomal integral membrane protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.200\tTb927.8.200\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase (pseudogene), putative\t\tpseudogenic_transcript\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2100\tTb927.8.2100\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tvacuolar ATP synthase 16 kDa proteolipid subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2160\tPGPA\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR001140\tC\tmultidrug resistance protein A\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2200\tTb927.8.2200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tterbinafine resistance locus protein (yip1), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2380\tABCG5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2480\tTb927.8.2480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t3-oxo-5-alpha-steroid 4-dehydrogenase-like, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2520\tACS\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tacetyl-CoA synthetase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3240\tTb927.8.3240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tlathosterol oxidase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3320\tTb927.8.3320\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3330\tMCP18\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3400\tTb927.8.3400\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 12, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3620\tFT1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tfolate transporter 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3630\tFT2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tfolate transporter 2\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3650\tFT3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFolate transporter 3\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3880\tTb927.8.3880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3890\tTb927.8.3890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3900\tTb927.8.3900\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4010\tFLA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFlagellum adhesion protein 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4050\tFLA1BP-2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFLA1-binding protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4060\tFLA2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFlagellum adhesion protein 2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4100\tFLA1BP-1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFLA1-binding protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4110\tFLA3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFlagellum adhesion protein 3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4440\tMCP19\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.460\tTb927.8.460\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4600\tTb927.8.4600\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tZinc finger, C3HC4 type (RING finger), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4610\tRABX1\t\tGO:0016021\tPMID:9099693\tIDA\t\tC\tRas-related protein RabX1\tRAB2A\tmRNA\ttaxon:185431\t20140528\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4700\tAATP6\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.480\tTb927.8.480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphatidic acid phosphatase protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4890\tTb927.8.4890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpol-associated gene 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5030\tTb927.8.5030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttrafficking protein particle complex subunit 3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5420\tTb927.8.5420\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmethyltransferase domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0016021\tGO_REF:0000002\tISO\tGeneDB:LinJ.10.0760\tC\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20110223\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5570\tTb927.8.5570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttransporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.560\tTb927.8.560\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5810\tMCP24\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6000\tTb927.8.6000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tfatty acid desaturase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6410\tKAR3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tshort-chain dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.650\tTb927.8.650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation-transporting ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6580\tSDH1\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511909.40\tC\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6620\tTb927.8.6620\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7140\tTb927.8.7140\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7150\tTb927.8.7150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7300\tTb927.8.7300\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7320\tTb927.8.7320\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7410\tTb927.8.7410\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcalreticulin, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7430\tTb927.8.7430\t\tGO:0005750\tGO_REF:0000011\tISM\tInterPro:IPR003422\tC\tubiquinol-cytochrome c reductase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7460\tTb927.8.7460\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmetal-ion transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7560\tTb927.8.7560\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tCorA-like Mg2+ transporter protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7580\tTb927.8.7580\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7590\tTb927.8.7590\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7680:mRNA\tTb927.8.7680\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7700:mRNA\tTb927.8.7700\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7710:mRNA\tTb927.8.7710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7720:mRNA\tTb927.8.7720\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7860:mRNA\tTb927.8.7860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7870:mRNA\tTb927.8.7870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7890:mRNA\tTb927.8.7890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7900:mRNA\tTb927.8.7900\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7920:mRNA\tTb927.8.7920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7930:mRNA\tTb927.8.7930\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7940:mRNA\tTb927.8.7940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8090:mRNA\tTb927.8.8090\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8100:mRNA\tTb927.8.8100\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8220:mRNA\tTb927.8.8220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8230:mRNA\tTb927.8.8230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8240:mRNA\tTb927.8.8240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8250:mRNA\tTb927.8.8250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8260:mRNA\tTb927.8.8260\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8300:mRNA\tTb927.8.8300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8360:mRNA\tTb927.8.8360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10010\tJ34\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb09.211.1550\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1050\tTb927.9.1050\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.160.0110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1110\tTb927.9.1110\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.160.0160\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12400\tTb927.9.12400\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE/STE11 serine/threonine-protein kinase, putative\tTb09.211.3410\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1250\tTb927.9.1250\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.160.0260\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1280\tTb927.9.1280\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.160.0280\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13030\tTb927.9.13030\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9GU66_DROME\tC\tQA-SNARE protein putative\tTb09.211.3920\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14420\tPPIase\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPeptidyl-prolyl cis-trans isomerase C, mitochondrial, putative\tTb09.211.4880\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15460\tTb927.9.15460\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcalcium motive p-type ATPase, putative\tTb09.244.2570\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15660\tACP6\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q26721\tC\tprocyclic-enriched flagellar receptor adenylate cyclase 6\tTb09.244.2380|GRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15700\tTb927.9.15700\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2330|NCDS.Tb927.9.15705\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15710\tTb927.9.15710\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2310|NCDS.Tb927.9.15715\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15730\tTb927.9.15730\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2280|NCDS.Tb927.9.15735\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15760\tTb927.9.15760\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2240\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15790\tTb927.9.15790\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2200|NCDS.Tb927.9.15795|Tb927.9.15795\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15940\tTb927.9.15940\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\tTb09.244.2060\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.160\tTb927.9.160\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.354.0060\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16200\tTb927.9.16200\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.1830\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16320\tTb927.9.16320\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.244.1740\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16460\tTb927.9.16460\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.1600\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16490\tTb927.9.16490\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.244.1580\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16500\tTb927.9.16500\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.1570\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16640\tTb927.9.16640\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.244.1410\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.17050\tTb927.9.17050\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.1000\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.17140\tTb927.9.17140\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.244.0910\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.17850\tTb927.9.17850\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.0250\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.17910\tTb927.9.17910\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.0200\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.18050\tTb927.9.18050\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.0050\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.190\tTb927.9.190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.354.0090\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.2050\tTb927.9.2050\t\tGO:0016021\tGO_REF:0000011\tISM\tPfam:PF04893\tC\tmembrane protein YIP1, putative\tTb09.160.0840\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.270\tTb927.9.270\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.354.0180\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.3120\tTb927.9.3120\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE/STE11 serine/threonine-protein kinase, putative\tTb09.160.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.440\tTb927.9.440\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.142.0100\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.570\tTb927.9.570\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.142.0230\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.580\tTb927.9.580\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.142.0240\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6310\tTb927.9.6310\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\tTb09.160.4600\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.660\tTb927.9.660\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein\tTb09.142.0310\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7320\tTb927.9.7320\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\tTb09.160.5380\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7330\tTb927.9.7330\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\tTb09.160.5390\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7400\tTb927.9.7400\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\tTb09.v1.0310\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7410\tTb927.9.7410\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\tTb09.v1.0320\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7470\tNT10\t\tGO:0016021\tPMID:15478805\tIDA\t\tC\tpurine nucleoside transporter\tTb09.160.5480\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7700\tTb927.9.7700\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 1, putative\tTb09.160.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8160\tJ11\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb09.211.0140\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.940\tTb927.9.940\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, pseudogene), putative\tTb09.160.0010\tpseudogenic_transcript\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 } ], "gorule-0000063": [ { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5100b\tTb11.02.5100b\t\tGO:0005739\tPMID:20660476\tISS\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20130725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0000178\tGO_REF:0000002\tISS\t\tC\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20091113\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0004540\tGO_REF:0000002\tISS\t\tF\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20091113\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0005085\tGO_REF:0000002\tISS\t\tF\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20091113\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0005739\tPMID:15223320\tISS\t\tC\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20130725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380\tRRP44\t\tGO:0006364\tGO_REF:0000002\tISS\t\tP\texosome complex exonuclease RRP44p homologue\tNCDS.Tb927.11.7451\tmRNA\ttaxon:185431\t20091113\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390\tGRBC4\t\tGO:0005739\tPMID:20660476|PMID:18073385\tISS\t\tC\tmRNA processing protein, putative\tNCDS.Tb927.11.7452|MRB5390\tmRNA\ttaxon:185431\t20130725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5410\tAOS1\t\tGO:0003824\tGO_REF:0000002\tISS\t\tF\tubiquitin activating enzyme (E1) subunit Aos1, putative\tNCDS.Tb927.11.7454\tmRNA\ttaxon:185431\t20130726\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0016491\tGO_REF:0000002\tISS\t\tF\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1770\tGRX2\t\tGO:0015036\tGO_REF:0000002\tISS\t\tF\tDithiol glutaredoxin 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1960\tJ16\t\tGO:0006457\tGO_REF:0000024\tISS\t\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10420\tTb927.10.10420\t\tGO:0003756\tGO_REF:0000002\tISS\t\tF\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10600\tTb927.10.10600\t\tGO:0003779\tGO_REF:0000002\tISS\t\tF\tARP2/3 complex 16kDa subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10600\tTb927.10.10600\t\tGO:0005885\tGO_REF:0000002\tISS\t\tC\tARP2/3 complex 16kDa subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10600\tTb927.10.10600\t\tGO:0007010\tGO_REF:0000002\tISS\t\tP\tARP2/3 complex 16kDa subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10810\tTb927.10.10810\t\tGO:0008033\tGO_REF:0000002\tISS\t\tP\tadenosine deaminase-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10810\tTb927.10.10810\t\tGO:0008251\tGO_REF:0000002\tISS\t\tF\tadenosine deaminase-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1140\tTUBE1\t\tGO:0007018\tGO_REF:0000024\tISS\t\tP\tepsilon tubulin\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11700\tTb927.10.11700\t\tGO:0004385\tGO_REF:0000024\tISS\t\tF\tguanylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11700\tTb927.10.11700\t\tGO:0015949\tGO_REF:0000024\tISS\t\tP\tguanylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11800\tTb927.10.11800\t\tGO:0003777\tGO_REF:0000002\tISS\t\tF\tAxonemal inner arm dynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11800\tTb927.10.11800\t\tGO:0007018\tGO_REF:0000002\tISS\t\tP\tAxonemal inner arm dynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12510\tTb927.10.12510\t\tGO:0005886\tGO_REF:0000002\tISS\t\tC\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12840\tMCP12\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13120\tMCP14\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14040\tTb927.10.14040\t\tGO:0016469\tGO_REF:0000024\tISS\t\tC\tvacuolar ATP synthase subunit c, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15220\tTb927.10.15220\t\tGO:0005783\tPMID:20660476\tISS\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20100916\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0000056\tGO_REF:0000002\tISS\t\tP\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20120807\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0090069\tPMID:16260602\tISS\t\tP\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20120807\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15650\tmt-SAF11\t\tGO:0009982\tGO_REF:0000002\tISS\t\tF\tMitoribosomal SSU assembly factor 11\t\tmRNA\ttaxon:185431\t20100721\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15690\tDOC1\t\tGO:0005680\tGO_REF:0000002\tISS\t\tC\tanaphase promoting complex, subunit 10-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15690\tDOC1\t\tGO:0030234\tGO_REF:0000002\tISS\t\tF\tanaphase promoting complex, subunit 10-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15690\tDOC1\t\tGO:0051726\tGO_REF:0000002\tISS\t\tP\tanaphase promoting complex, subunit 10-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15710\tMCP7\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0003723\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0003743\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16070\tEIF4E2\t\tGO:0006413\tPMID:15694484\tISA\t\tP\tEukaryotic translation initiation factor 4E-2\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16100\tTb927.10.16100\t\tGO:0003755\tGO_REF:0000002\tISS\t\tF\tFK506-binding protein (FKBP)-type peptidyl-prolyl isomerase, putative\t\tmRNA\ttaxon:185431\t20120823\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16100\tTb927.10.16100\t\tGO:0031072\tGO_REF:0000002\tISS\t\tF\tFK506-binding protein (FKBP)-type peptidyl-prolyl isomerase, putative\t\tmRNA\ttaxon:185431\t20120823\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.210\tTbGAA1\t\tGO:0046658\tPMID:12582175\tISS\t\tC\tGPI transamidase component GAA1\t\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0000395\tGO_REF:0000002\tISS\t\tP\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0003729\tGO_REF:0000002\tISS\t\tF\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0005685\tGO_REF:0000002\tISS\t\tC\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0005829\tGO_REF:0000002\tISS\t\tC\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2120\tTb927.10.2120\t\tGO:0008270\tGO_REF:0000002\tISS\t\tF\tU1 small nuclear ribonucleoprotein C, putative\t\tmRNA\ttaxon:185431\t20120822\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0004324\tGO_REF:0000024\tISS\t\tF\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.230\tTb927.10.230\t\tGO:0005839\tPMID:11309374\tISS\t\tC\tproteasome subunit alpha type-5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2530\tADKF\t\tGO:0004017\tGO_REF:0000002\tISS\t\tF\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2770\tTb927.10.2770\t\tGO:0003743\tGO_REF:0000024\tISS\t\tF\teukaryotic translation initiation factor 5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2770\tTb927.10.2770\t\tGO:0006413\tGO_REF:0000024\tISS\t\tP\teukaryotic translation initiation factor 5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3260\tLACS5\t\tGO:0030497\tPMID:20382188\tISS\t\tP\tLong-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 5) (LACS 5), putative\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4000\tTb927.10.4000\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tmethylglutaconyl-CoA hydratase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0005739\tPMID:15223320\tISS\t\tC\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4480\tTb927.10.4480\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tDNA damage repair protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4540\tTb927.10.4540\t\tGO:0003779\tGO_REF:0000002\tISS\t\tF\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4540\tTb927.10.4540\t\tGO:0005885\tGO_REF:0000002\tISS\t\tC\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4540\tTb927.10.4540\t\tGO:0007010\tGO_REF:0000002\tISS\t\tP\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4590\tTb927.10.4590\t\tGO:0006465\tGO_REF:0000024\tISS\t\tP\tmitochondrial inner membrane signal peptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4690\tTb927.10.4690\t\tGO:0003777\tGO_REF:0000024\tISS\t\tF\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4690\tTb927.10.4690\t\tGO:0007017\tGO_REF:0000024\tISS\t\tP\tdynein light chain, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4910\tMCP4\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5230\tARL13\t\tGO:0005525\tGO_REF:0000002\tISS\t\tF\tADP-ribosylation factor-like protein 13, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5230\tARL13\t\tGO:0015031\tGO_REF:0000002\tISS\t\tP\tADP-ribosylation factor-like protein 13, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6030\tPSA1\t\tGO:0005839\tPMID:10498178\tISS\t\tC\tproteasome subunit alpha type-1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6080\tTb927.10.6080\t\tGO:0019774\tPMID:7499235\tISS\t\tC\tproteasome subunit beta type-5, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6370\tTb927.10.6370\t\tGO:0008270\tGO_REF:0000024\tISS\t\tF\t60S ribosomal proteins L37, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6810\tTb927.10.6810\t\tGO:0015949\tGO_REF:0000024\tISS\t\tP\tguanylate kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0006334\tGO_REF:0000002\tISS\t\tP\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0031497\tGO_REF:0000002\tISS\t\tP\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0042393\tGO_REF:0000002\tISS\t\tF\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0005524\tGO_REF:0000024\tISS\t\tF\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0005634\tGO_REF:0000024\tISS\t\tC\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.740\tSMC4\t\tGO:0007059\tGO_REF:0000024\tISS\t\tP\tstructural maintenance of chromosome 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0006086\tGO_REF:0000024\tISS\t\tP\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.790\tTb927.10.790\t\tGO:0016021\tGO_REF:0000024\tISS\t\tC\tvesicle-associated membrane protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8020\tPOP\t\tGO:0004252\tGO_REF:0000002\tISS\t\tF\tserine peptidase clan SC, family S9A, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8910\tNUP181\t\tGO:0046907\tPMID:19525551\tISS\t\tP\tNucleoporin NUP181\t\tmRNA\ttaxon:185431\t20130402\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9440\tNDH2\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tNADH dehydrogenase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9750\tupl3\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-protein ligase, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0005545\tPMID:12878588\tISS\t\tF\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0005737\tPMID:12878588\tISS\t\tC\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10000\tVPS24\t\tGO:0016020\tPMID:12878588\tISS\t\tC\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tTb11.01.1760\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0030163\tPMID:12446803\tISS\t\tP\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0006139\tPMID:15694484\tISA\t\tP\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0006412\tPMID:15694484\tISA\t\tP\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10690\tTb927.11.10690\t\tGO:0005783\tPMID:20660476\tISS\t\tC\thypothetical protein, conserved\tTb11.01.2460\tmRNA\ttaxon:185431\t20100916\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0006810\tGO_REF:0000024\tISS\t\tP\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20120821\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0043190\tGO_REF:0000024\tISS\t\tC\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1100\tTb927.11.1100\t\tGO:0005737\tGO_REF:0000002\tISS\t\tC\tcysteine peptidase, Clan CA, family C2, putative\tTb11.47.0036\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11150\tU5-40K\t\tGO:0008380\tPMID:19429779\tISS\t\tP\tU5 snRNP-specific 40 kDa protein\tTb11.01.2940\tmRNA\ttaxon:185431\t20090514\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0003723\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0003743\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0006413\tPMID:15694484\tISA\t\tP\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12090\tTb927.11.12090\t\tGO:0004519\tGO_REF:0000024\tISS\t\tF\tendonuclease III, putative\tTb11.01.3910\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12230\tHslU2\t\tGO:0004176\tGO_REF:0000002\tISS\t\tF\tATP-dependent protease ATPase subunit HslU2\tTb11.01.4050\tmRNA\ttaxon:185431\t20100714\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12350\tmt-SAF35\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tMitoribosomal SSU assembly factor 35\tTb11.01.4170\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12600\tTb927.11.12600\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tATP-dependent DNA helicase, putative\tTb11.01.4440\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12680\tTb927.11.12680\t\tGO:0006457\tGO_REF:0000024\tISS\t\tP\tprefoldin subunit 2, putative\tTb11.01.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12680\tTb927.11.12680\t\tGO:0016272\tGO_REF:0000024\tISS\t\tC\tprefoldin subunit 2, putative\tTb11.01.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12850\tOPB\t\tGO:0004252\tGO_REF:0000002\tISS\t\tF\toligopeptidase b\tTb11.52.0003\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13060\tTb927.11.13060\t\tGO:0005737\tGO_REF:0000002\tISS\t\tC\ttranslation-associated element 2, putative\tTb11.01.4630\tmRNA\ttaxon:185431\t20120816\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13060\tTb927.11.13060\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\ttranslation-associated element 2, putative\tTb11.01.4630\tmRNA\ttaxon:185431\t20120816\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13500\tTb927.11.13500\t\tGO:0044782\tGO_REF:0000001\tISS\t\tP\tpar1\tTb11.01.5100\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0005739\tGO_REF:0000002\tISS\t\tC\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0003756\tGO_REF:0000002\tISS\t\tF\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20100721\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0015036\tGO_REF:0000002\tISS\t\tF\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13940\tTb927.11.13940\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme E2, putative\tTb11.01.5510\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0016021\tGO_REF:0000002\tISS\t\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14210\tTb927.11.14210\t\tGO:0004198\tGO_REF:0000024\tISS\t\tF\tconserved protein\tTb11.01.5800\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14210\tTb927.11.14210\t\tGO:0006508\tGO_REF:0000024\tISS\t\tP\tconserved protein\tTb11.01.5800\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0005739\tGO_REF:0000002\tISS\t\tC\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20100805\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14780\tPMI\t\tGO:0005737\tPMID:11084042\tISS\t\tC\tphosphomannose isomerase\tTb11.01.6410\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0006735\tPMID:18534909\tISS\t\tP\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0008137\tPMID:18534909\tISS\t\tF\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0030964\tPMID:18534909\tISS\t\tC\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15810\tNDUFB9\t\tGO:0031966\tPMID:18534909\tISS\t\tC\tNADH-ubiquinone oxidoreductase B22 subunit\tTb11.01.7460|NI2M\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16150\tTb927.11.16150\t\tGO:0006457\tGO_REF:0000002\tISS\t\tP\ttubulin binding cofactor A, putative\tTb11.01.7825\tmRNA\ttaxon:185431\t20100721\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16790\tECK1\t\tGO:0004672\tGO_REF:0000002\tISS\t\tF\tmitogen-activated protein kinase\tTb11.01.8550\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16870\tNDUFA2\t\tGO:0006120\tPMID:18534909\tISS\t\tP\tNADH dehydrogenase subunit NI8M, putative\tTb11.01.8630\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0005524\tGO_REF:0000024\tISS\t\tF\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0006810\tGO_REF:0000024\tISS\t\tP\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0042626\tGO_REF:0000024\tISS\t\tF\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20730\tTb927.11.20730\t\tGO:0006071\tGO_REF:0000002\tISS\t\tP\tglycerophosphoryl diester phosphodiesterase, putative\tTb11.01.0580\tmRNA\ttaxon:185431\t20120524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20730\tTb927.11.20730\t\tGO:0008889\tGO_REF:0000002\tISS\t\tF\tglycerophosphoryl diester phosphodiesterase, putative\tTb11.01.0580\tmRNA\ttaxon:185431\t20120524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0003723\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0003743\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2260\tEIF4E1\t\tGO:0006413\tPMID:15694484\tISA\t\tP\tEukaryotic translation initiation factor 4E-1\tTb11.18.0004\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2490\tTb927.11.2490\t\tGO:0047496\tGO_REF:0000024\tISS\t\tP\tUnc104-like kinesin, putative\tTb11.02.0090\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.270\tMCP10\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\tTb11.03.0870\tmRNA\ttaxon:185431\t20100805\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2730\tgalE\t\tGO:0003978\tGO_REF:0000002\tISS\t\tF\tUDP-galactose 4-epimerase\tUDPGE|Tb11.02.0330\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3310\tTb927.11.3310\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme, putative\tTb11.02.0815\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3340\tRBP34\t\tGO:0003723\tGO_REF:0000024\tISS\t\tF\tKKT-interacting protein 12\tKKIP12|Tb11.02.0840\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3570\tTb927.11.3570\t\tGO:0008235\tGO_REF:0000002\tISS\t\tF\taminopeptidase, putative\tTb11.02.1070\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3980\tTb927.11.3980\t\tGO:0004222\tGO_REF:0000002\tISS\t\tF\tmitochondrial processing peptidase alpha subunit, putative\tTb11.02.1480\tmRNA\ttaxon:185431\t20100721\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3980\tTb927.11.3980\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tmitochondrial processing peptidase alpha subunit, putative\tTb11.02.1480\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5300\tKIN13-3\t\tGO:0003774\tGO_REF:0000024\tISS\t\tF\tKinesin-13 3, putative\tTb11.02.2970|Kif13-3\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0006810\tGO_REF:0000024\tISS\t\tP\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0042626\tGO_REF:0000024\tISS\t\tF\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0043190\tGO_REF:0000024\tISS\t\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0005739\tPMID:11470527\tISS\t\tC\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6160\tERF3\t\tGO:0006414\tGO_REF:0000024\tISS\t\tP\teukaryotic release factor 3, putative\tTb11.02.4030\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0003723\tGO_REF:0000002\tISS\t\tF\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6740\tPUF10\t\tGO:0016071\tGO_REF:0000002\tISS\t\tP\tpumilio/PUF RNA binding protein 10, putative\tTb11.02.4570|NCDS.Tb927.11.6740\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0004674\tGO_REF:0000002\tISS\t\tF\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20040723\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20040723\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20040723\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0004222\tGO_REF:0000002\tISS\t\tF\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0006508\tGO_REF:0000002\tISS\t\tP\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0007155\tGO_REF:0000002\tISS\t\tP\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0008270\tGO_REF:0000002\tISS\t\tF\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7620\tTb927.11.7620\t\tGO:0016020\tGO_REF:0000002\tISS\t\tC\tMSP-A, putative\tTb11.02.5610\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8090\tTb927.11.8090\t\tGO:0004722\tGO_REF:0000024\tISS\t\tF\tprotein phosphatase 1, putative\tTb11.01.0450\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0003954\tPMID:18534909\tISS\t\tF\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0006735\tPMID:18534909\tISS\t\tP\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0008137\tPMID:18534909\tISS\t\tF\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8910\tNDUFA13\t\tGO:0030964\tPMID:18534909\tISS\t\tC\tNADH dehydrogenase subunit NB6M, putative\tTb11.01.0640|NB6M\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0004175\tPMID:11854272|PMID:12213827\tISS\t\tF\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0005838\tPMID:11854272|PMID:12213827\tISS\t\tC\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9220\tRPN2\t\tGO:0043161\tPMID:11854272|PMID:12213827\tISS\t\tP\tproteasome regulatory non-ATP-ase subunit 2\tTb11.01.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0008412\tGO_REF:0000024\tISS\t\tF\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1560\tTb927.2.1560\t\tGO:0003755\tGO_REF:0000024\tISS\t\tF\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1560\tTb927.2.1560\t\tGO:0006457\tGO_REF:0000024\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1680\tTb927.2.1680\t\tGO:0003755\tGO_REF:0000024\tISS\t\tF\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1680\tTb927.2.1680\t\tGO:0006457\tGO_REF:0000024\tISS\t\tP\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0004386\tGO_REF:0000024\tISS\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0005524\tGO_REF:0000024\tISS\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2430\tCK2A2\t\tGO:0005524\tGO_REF:0000024\tISS\t\tF\tcasein kinase II, alpha chain\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2440\tRPN6\t\tGO:0004175\tGO_REF:0000002\tISS\t\tF\tproteasome regulatory non-ATPase subunit 6\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2460\tUBC9\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2460\tUBC9\t\tGO:0006464\tGO_REF:0000024\tISS\t\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2970\tMCP13\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3030\tTb927.2.3030\t\tGO:0009841\tGO_REF:0000002\tISS\t\tC\tATP-dependent Clp protease subunit, heat shock protein 78 (HSP78), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3080\tTb927.2.3080\t\tGO:0006633\tGO_REF:0000002\tISS\t\tP\tfatty acid desaturase, putative\t10C8.340\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3620\tTb927.2.3620\t\tGO:0005525\tGO_REF:0000012\tISA\t\tF\tGTP-binding elongation factor Tu family, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3720\tTb927.2.3720\t\tGO:0004842\tGO_REF:0000024\tISS\t\tF\tubiquitin-conjugating enzyme, putative\t\tmRNA\ttaxon:185431\t20100716\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3720\tTb927.2.3720\t\tGO:0006464\tGO_REF:0000024\tISS\t\tP\tubiquitin-conjugating enzyme, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3780\tTb927.2.3780\t\tGO:0005525\tGO_REF:0000024\tISS\t\tF\ttranslation initiation factor IF-2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3930\tMCM3\t\tGO:0006270\tGO_REF:0000024\tISS\t\tP\tDNA replication licensing factor MCM3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4020\tAPPBP1\t\tGO:0003824\tGO_REF:0000024\tISS\t\tF\tubiquitin activating enzyme, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4210\tPEPCK\t\tGO:0004612\tPMID:2671940\tISS\t\tF\tPhosphoenolpyruvate carboxykinase [ATP], glycosomal\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4280\tTb927.2.4280\t\tGO:0006470\tGO_REF:0000024\tISS\t\tP\tkinetoplastid-specific dual specificity phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4870\tTb927.2.4870\t\tGO:0008138\tGO_REF:0000024\tISS\t\tF\tkinetoplastid-specific dual specificity phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4930\tTb927.2.4930\t\tGO:0003824\tGO_REF:0000024\tISS\t\tF\testerase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5020\tTb927.2.5020\t\tGO:0003997\tGO_REF:0000002\tISS\t\tF\tacyl-CoA oxidase, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5230\tTb927.2.5230\t\tGO:0006468\tGO_REF:0000024\tISS\t\tP\tCAMK family pseudokinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5250\tTb927.2.5250\t\tGO:0004835\tGO_REF:0000024\tISS\t\tF\ttubulin-tyrosine ligase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5850\tSm-D2\t\tGO:0017069\tGO_REF:0000002\tISS\t\tF\tsmall nuclear ribonucleoprotein SmD2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5850\tSm-D2\t\tGO:0045291\tPMID:10900267\tISS\t\tP\tsmall nuclear ribonucleoprotein SmD2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5910\tTb927.2.5910\t\tGO:0006412\tGO_REF:0000024\tISS\t\tP\t40S ribosomal protein S13, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6050\tTb927.2.6050\t\tGO:0006890\tGO_REF:0000002\tISS\t\tP\tbeta prime COP protein\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6130\tTb927.2.6130\t\tGO:0042626\tGO_REF:0000024\tISS\t\tF\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6130\tTb927.2.6130\t\tGO:0043190\tGO_REF:0000024\tISS\t\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6150\tTbNT2/927\t\tGO:0015211\tPMID:11937511\tISS\t\tF\tadenosine transporter 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6200\tTbNT3\t\tGO:0015211\tPMID:19937511\tISS\t\tF\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6220\tTbNT4\t\tGO:0015211\tPMID:11937511\tISS\t\tF\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6240\tTbNT5\t\tGO:0015211\tPMID:11937511\tISS\t\tF\tadenosine transporter 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6280\tTbNT7\t\tGO:0015211\tPMID:11937511\tISS\t\tF\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1400\tTb927.3.1400\t\tGO:0019799\tGO_REF:0000012\tISA\t\tF\talpha-tubulin N-acetyltransferase, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1840\tTb927.3.1840\t\tGO:0019408\tPMID:20637498\tISS\t\tP\t3-oxo-5-alpha-steroid 4-dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20100922\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2980\tMCP17\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tMitoferrin\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3740\tNUFIP\t\tGO:0003723\tPMID:35013170\tISS\t\tF\tNuclear FMR1 interacting protein 1\t\tmRNA\ttaxon:185431\t20220422\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4700\tTb927.3.4700\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tDomain of unknown function (DUF4379), putative\t\tmRNA\ttaxon:185431\t20130821\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4700\tTb927.3.4700\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tDomain of unknown function (DUF4379), putative\t\tmRNA\ttaxon:185431\t20100803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1250\tTb927.4.1250\t\tGO:0005524\tGO_REF:0000024\tISS\t\tF\tperoxisome biogenesis factor 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2450\tPDI-1\t\tGO:0004362\tGO_REF:0000024\tISS\t\tF\tthioredoxin, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0042626\tGO_REF:0000024\tISS\t\tF\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0043190\tGO_REF:0000024\tISS\t\tC\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4490\tMRPE\t\tGO:0006810\tPMID:11918801\tISS\t\tP\tmultidrug resistance protein E\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5030\tPP1\t\tGO:0004722\tPMID:2169604\tISS\t\tF\tprotein phosphatase 1\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.870\tIAD-1alpha\t\tGO:0005858\tGO_REF:0000002\tISS\t\tC\tdynein heavy chain, putative\t\tmRNA\ttaxon:185431\t20090527\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1060\tTb927.5.1060\t\tGO:0004222\tGO_REF:0000002\tISS\t\tF\tmitochondrial processing peptidase, beta subunit, putative\t\tmRNA\ttaxon:185431\t20100721\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1550\tMCP23\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100804\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3830\tPYR4\t\tGO:0010181\tPMID:18312275\tISS\t\tF\tdihydroorotate dehydrogenase (fumarate)\tDHODH\tmRNA\ttaxon:185431\t20091123\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3920\tPEX6\t\tGO:0016887\tGO_REF:0000024\tISS\t\tF\tPeroxisome biogenesis factor 6\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.950\tTb927.5.950\t\tGO:0004362\tPMID:18669638\tISS\t\tF\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20110607\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1260\tPSB1\t\tGO:0070011\tPMID:10498178\tISS\t\tF\tproteasome beta-1 subunit, putative\t\tmRNA\ttaxon:185431\t20100721\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1680\tH2F1\t\tGO:0008270\tPMID:19096045\tISS\t\tF\tmitochondrial RNA binding protein 1\tMRB1680\tmRNA\ttaxon:185431\t20120831\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1900\tenp1\t\tGO:0005730\tGO_REF:0000012\tISA\t\tC\tessential nuclear protein 1, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4980\tRPS14\t\tGO:0003735\tPMID:2188114\tISS\t\tF\t40S ribosomal protein S14\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.930\tMCA3\t\tGO:0008233\tPMID:12062425\tISS\t\tF\tmetacaspase MCA3\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1320\tHSP10\t\tGO:0005759\tGO_REF:0000024\tISS\t\tC\t10 kDa heat shock protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1340\tHSP10\t\tGO:0005759\tGO_REF:0000024\tISS\t\tC\t10 kDa heat shock protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1610\tTb927.7.1610\t\tGO:0003824\tGO_REF:0000002\tISS\t\tF\t6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1610\tTb927.7.1610\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\t6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1610\tTb927.7.1610\t\tGO:0006003\tGO_REF:0000002\tISS\t\tP\t6-phosphofructo-2-kinase/fructose-2,6-biphosphatase, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1900\tCRK7\t\tGO:0004674\tGO_REF:0000024\tISS\t\tF\tcdc2-related protein kinase 7, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1900\tCRK7\t\tGO:0051726\tGO_REF:0000002\tISS\t\tP\tcdc2-related protein kinase 7, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2340\tTb927.7.2340\t\tGO:0003735\tGO_REF:0000024\tISS\t\tF\t40S ribosomal protein S15, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2340\tTb927.7.2340\t\tGO:0006412\tGO_REF:0000024\tISS\t\tP\t40S ribosomal protein S15, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2370\tTb927.7.2370\t\tGO:0003735\tGO_REF:0000024\tISS\t\tF\t40S ribosomal protein S15, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2370\tTb927.7.2370\t\tGO:0006412\tGO_REF:0000024\tISS\t\tP\t40S ribosomal protein S15, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2540\tTb927.7.2540\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3120\tSm-D1\t\tGO:0045291\tPMID:10900267\tISS\t\tP\tsmall nuclear ribonucleoprotein SmD1\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3940\tMCP16\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20100804\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.610\tTb927.7.610\t\tGO:0005739\tGO_REF:0000002\tISS\t\tC\tmitochondrial DNA ligase homolog, LIG k-alpha\t\tmRNA\ttaxon:185431\t20100804\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1200\tTbA2\t\tGO:0005388\tPMID:14724285\tISS\t\tF\tvacuolar-type Ca2+-ATPase 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1590\tupl3\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-protein ligase, putative\t\tmRNA\ttaxon:185431\t20100714\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2050\tTb927.8.2050\t\tGO:0005737\tPMID:14718535\tISS\t\tC\tGDP-mannose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20100920\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2310\tTb927.8.2310\t\tGO:0007035\tGO_REF:0000024\tISS\t\tP\t(H+)-ATPase G subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2560\tU5_15K\t\tGO:0005681\tGO_REF:0000024\tISS\t\tC\tspliceosomal U5 snRNP-specific protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2640\tUBA1a\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-activating enzyme E1, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3290\tREV3\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tDNA polymerase zeta catalytic subunit, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3800\tTb927.8.3800\t\tGO:0005576\tPMID:15020239\tISS\t\tC\tguanosine diphosphatase, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4010\tFLA1\t\tGO:0005929\tPMID:8946390\tISS\t\tC\tFlagellum adhesion protein 1\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4410\tTb927.8.4410\t\tGO:0005885\tGO_REF:0000024\tISS\t\tC\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4410\tTb927.8.4410\t\tGO:0030833\tGO_REF:0000024\tISS\t\tP\tARP2/3 complex subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4500\teif4g5\t\tGO:0003723\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4 gamma 5\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4500\teif4g5\t\tGO:0006412\tPMID:15694484\tISA\t\tP\tEukaryotic translation initiation factor 4 gamma 5\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4810\tPHB1\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tprohibitin 1\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5090\tRPA1\t\tGO:0003899\tGO_REF:0000002\tISS\t\tF\tDNA-directed RNA polymerase I largest subunit\tRPA190\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5090\tRPA1\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tDNA-directed RNA polymerase I largest subunit\tRPA190\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5090\tRPA1\t\tGO:0006351\tGO_REF:0000002\tISS\t\tP\tDNA-directed RNA polymerase I largest subunit\tRPA190\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5460\tTb-44\t\tGO:0006816\tPMID:7818488\tISS\t\tP\t44 kDa calflagin\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5880\tTb927.8.5880\t\tGO:0003743\tGO_REF:0000024\tISS\t\tF\teukaryotic translation initiation factor 1A, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5880\tTb927.8.5880\t\tGO:0005737\tGO_REF:0000002\tISS\t\tC\teukaryotic translation initiation factor 1A, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5880\tTb927.8.5880\t\tGO:0006413\tGO_REF:0000024\tISS\t\tP\teukaryotic translation initiation factor 1A, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6090\tTb927.8.6090\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6200\tTb927.8.6200\t\tGO:0006457\tGO_REF:0000002\tISS\t\tP\ttubulin folding cofactor D, putative\t\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6510\tUBC12\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6750\tTCTP1\t\tGO:0005739\tGO_REF:0000002\tISS\t\tC\ttranslationally controlled tumor protein (TCTP), putative\t\tmRNA\ttaxon:185431\t20120816\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6750\tTCTP1\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\ttranslationally controlled tumor protein (TCTP), putative\t\tmRNA\ttaxon:185431\t20120816\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6840\tMLH1\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tmismatch repair protein MLH1\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.690\tPIN1\t\tGO:0003755\tGO_REF:0000024\tISS\t\tF\tPPIase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6970\tTb927.8.6970\t\tGO:0000050\tGO_REF:0000024\tISS\t\tP\t3-methylcrotonyl-CoA carboxylase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.700\tTbPIF7\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tDNA repair and recombination helicase protein PIF7\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7120\tSQS\t\tGO:0006696\tPMID:1807826\tISS\t\tP\tsqualene synthase, putative\t\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7380\tTb927.8.7380\t\tGO:0045454\tGO_REF:0000002\tISS\t\tP\tdihydrolipoamide dehydrogenase, point mutation\t\tmRNA\ttaxon:185431\t20100722\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7400\tRPB1\t\tGO:0003677\tGO_REF:0000024\tISS\t\tF\tRNA polymerase IIA largest subunit\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7400\tRPB1\t\tGO:0003899\tGO_REF:0000024\tISS\t\tF\tRNA polymerase IIA largest subunit\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7400\tRPB1\t\tGO:0006351\tGO_REF:0000024\tISS\t\tP\tRNA polymerase IIA largest subunit\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7520\tTb927.8.7520\t\tGO:0008235\tGO_REF:0000002\tISS\t\tF\taminopeptidase, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.920:mRNA\tPEX4\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.980\tPAGM\t\tGO:0004610\tGO_REF:0000024\tISS\t\tF\tphosphoacetylglucosamine mutase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.980\tPAGM\t\tGO:0006041\tGO_REF:0000024\tISS\t\tP\tphosphoacetylglucosamine mutase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10440\tTb927.9.10440\t\tGO:0003887\tGO_REF:0000002\tISS\t\tF\tDNA polymerase epsilon catalytic subunit, putative\tTb09.211.1820\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10440\tTb927.9.10440\t\tGO:0006261\tGO_REF:0000002\tISS\t\tP\tDNA polymerase epsilon catalytic subunit, putative\tTb09.211.1820\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10580\tTb927.9.10580\t\tGO:0004395\tGO_REF:0000002\tISS\t\tF\t3-demethylubiquinone-9 3-methyltransferase, putative\tTb09.211.1960\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10580\tTb927.9.10580\t\tGO:0006743\tGO_REF:0000002\tISS\t\tP\t3-demethylubiquinone-9 3-methyltransferase, putative\tTb09.211.1960\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10710\tHBS1\t\tGO:0003746\tGO_REF:0000002\tISS\t\tF\telongation factor 1-alpha, putative\tTb09.211.2110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10710\tHBS1\t\tGO:0005853\tGO_REF:0000002\tISS\t\tC\telongation factor 1-alpha, putative\tTb09.211.2110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10710\tHBS1\t\tGO:0006414\tGO_REF:0000002\tISS\t\tP\telongation factor 1-alpha, putative\tTb09.211.2110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11040\tMCP3\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tmitochondrial carrier protein\tTb09.211.2370\tmRNA\ttaxon:185431\t20100804\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11410\tTb927.9.11410\t\tGO:0003735\tGO_REF:0000002\tISS\t\tF\t60S ribosomal protein L23, putative\tTb09.211.2640\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11410\tTb927.9.11410\t\tGO:0005840\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L23, putative\tTb09.211.2640\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11410\tTb927.9.11410\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\t60S ribosomal protein L23, putative\tTb09.211.2640\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11930\tTb927.9.11930\t\tGO:0003684\tGO_REF:0000002\tISS\t\tF\tDNA-repair protein, putative\tTb09.211.3040\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11930\tTb927.9.11930\t\tGO:0006289\tGO_REF:0000002\tISS\t\tP\tDNA-repair protein, putative\tTb09.211.3040\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12320\tTb927.9.12320\t\tGO:0000096\tGO_REF:0000002\tISS\t\tP\tcystathione gamma lyase, putative\tTb09.211.3330\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12320\tTb927.9.12320\t\tGO:0004123\tGO_REF:0000002\tISS\t\tF\tcystathione gamma lyase, putative\tTb09.211.3330\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12650\tUBA1b\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-activating enzyme E1, putative\tTb09.211.3610\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13250\tCPR\t\tGO:0004362\tGO_REF:0000002\tISS\t\tF\tNADPH--cytochrome P450 reductase, putative\tTb09.211.4110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13360\tupl3\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-protein ligase, putative\tTb09.211.4210\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14000\tTb927.9.14000\t\tGO:0003735\tGO_REF:0000002\tISS\t\tF\t60S ribosomal protein L12, putative\tTb09.211.4550\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14000\tTb927.9.14000\t\tGO:0005622\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L12, putative\tTb09.211.4550\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14000\tTb927.9.14000\t\tGO:0005840\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L12, putative\tTb09.211.4550\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14000\tTb927.9.14000\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\t60S ribosomal protein L12, putative\tTb09.211.4550\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14330\tTb927.9.14330\t\tGO:0006298\tGO_REF:0000002\tISS\t\tP\tmismatch repair protein PMS1, putative\tTb09.211.4840\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14330\tTb927.9.14330\t\tGO:0016887\tGO_REF:0000002\tISS\t\tF\tmismatch repair protein PMS1, putative\tTb09.211.4840\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14370\tTb927.9.14370\t\tGO:0003735\tGO_REF:0000002\tISS\t\tF\t60S ribosomal protein L26, putative\tTb09.211.4850\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14370\tTb927.9.14370\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\t60S ribosomal protein L26, putative\tTb09.211.4850\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14480\tTb927.9.14480\t\tGO:0007018\tGO_REF:0000002\tISS\t\tP\tdynein-associated protein, putative\tTb09.211.4920\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15030\tTb927.9.15030\t\tGO:0003887\tGO_REF:0000002\tISS\t\tF\tDNA polymerase epsilon subunit B, putative\tTb09.244.2820|NCDS.Tb927.9.15035\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15030\tTb927.9.15030\t\tGO:0006261\tGO_REF:0000002\tISS\t\tP\tDNA polymerase epsilon subunit B, putative\tTb09.244.2820|NCDS.Tb927.9.15035\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15590\tBARP\t\tGO:0009986\tPMID:10660566\tISS\t\tC\tBARP protein\tTb09.244.2450\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15590\tBARP\t\tGO:0045121\tPMID:10660566\tISS\t\tC\tBARP protein\tTb09.244.2450\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15600\tBARP\t\tGO:0045121\tPMID:10660566\tISS\t\tC\tBARP protein\tTb09.244.2440\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1610\tTb927.9.1610\t\tGO:0008526\tGO_REF:0000002\tISS\t\tF\tCDP-diacylglycerol--inositol 3-phosphatidyltransferase, putative\tTb09.160.0530\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1610\tTb927.9.1610\t\tGO:0008654\tGO_REF:0000002\tISS\t\tP\tCDP-diacylglycerol--inositol 3-phosphatidyltransferase, putative\tTb09.160.0530\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1810\tTb927.9.1810\t\tGO:0003735\tGO_REF:0000002\tISS\t\tF\t60S ribosomal protein L35, putative\tTb09.160.0700\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1810\tTb927.9.1810\t\tGO:0005840\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L35, putative\tTb09.160.0700\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1810\tTb927.9.1810\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\t60S ribosomal protein L35, putative\tTb09.160.0700\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1850\tTb927.9.1850\t\tGO:0003735\tGO_REF:0000002\tISS\t\tF\t60S ribosomal protein L35, putative\tTb09.160.0710\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1850\tTb927.9.1850\t\tGO:0005840\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L35, putative\tTb09.160.0710\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1850\tTb927.9.1850\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\t60S ribosomal protein L35, putative\tTb09.160.0710\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1970\tTb927.9.1970\t\tGO:0016192\tGO_REF:0000024\tISS\t\tP\tsyntaxin binding protein 1, putative\tTb09.160.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.2350\tTb927.9.2350\t\tGO:0004672\tGO_REF:0000002\tISS\t\tF\tcalcium/calmodulin-dependent protein kinase, putative\tTb09.160.1090\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.2350\tTb927.9.2350\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\tcalcium/calmodulin-dependent protein kinase, putative\tTb09.160.1090\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4440\tKREPB9\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tMitochondrial editosome-associated protein KREPB9\tTb09.160.3050\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4620\tUBA3\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-activating enzyme E1, putative\tTb09.160.3210\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4680\tEIF4A1\t\tGO:0003676\tPMID:15694484\tISA\t\tF\tEukaryotic initiation factor 4A-1\tTb09.160.3270\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4680\tEIF4A1\t\tGO:0005524\tPMID:15694484\tISA\t\tF\tEukaryotic initiation factor 4A-1\tTb09.160.3270\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4680\tEIF4A1\t\tGO:0006139\tPMID:15694484\tISA\t\tP\tEukaryotic initiation factor 4A-1\tTb09.160.3270\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4680\tEIF4A1\t\tGO:0006412\tPMID:15694484\tISA\t\tP\tEukaryotic initiation factor 4A-1\tTb09.160.3270\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4680\tEIF4A1\t\tGO:0008026\tPMID:15694484\tISA\t\tF\tEukaryotic initiation factor 4A-1\tTb09.160.3270\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4820\tTb927.9.4820\t\tGO:0006813\tGO_REF:0000002\tISS\t\tP\tcalcium/potassium channel (CAKC), putative\tTb09.160.3380\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4820\tTb927.9.4820\t\tGO:0015269\tGO_REF:0000002\tISS\t\tF\tcalcium/potassium channel (CAKC), putative\tTb09.160.3380\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4900\tCND1\t\tGO:0000796\tGO_REF:0000002\tISS\t\tC\tcondensin subunit 1, putative\tTb09.160.3470\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4900\tCND1\t\tGO:0007076\tGO_REF:0000002\tISS\t\tP\tcondensin subunit 1, putative\tTb09.160.3470\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5170\tTb927.9.5170\t\tGO:0004631\tPMID:1846667\tISS\t\tF\tphosphomevalonate kinase protein, putative\tTb09.160.3690\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5170\tTb927.9.5170\t\tGO:0005634\tPMID:1846667\tISS\t\tC\tphosphomevalonate kinase protein, putative\tTb09.160.3690\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5170\tTb927.9.5170\t\tGO:0005737\tPMID:1846667\tISS\t\tC\tphosphomevalonate kinase protein, putative\tTb09.160.3690\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5170\tTb927.9.5170\t\tGO:0006696\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tTb09.160.3690\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5170\tTb927.9.5170\t\tGO:0010142\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tTb09.160.3690\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5170\tTb927.9.5170\t\tGO:0019287\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tTb09.160.3690\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5170\tTb927.9.5170\t\tGO:0031388\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tTb09.160.3690\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5460\teif4g2\t\tGO:0003676\tPMID:15694484\tISA\t\tF\tEukaryotic translation initiation factor 4 gamma 2\tTb09.160.3980\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5460\teif4g2\t\tGO:0006139\tPMID:15694484\tISA\t\tP\tEukaryotic translation initiation factor 4 gamma 2\tTb09.160.3980\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6070\tRPS3\t\tGO:0003676\tGO_REF:0000002\tISS\t\tF\t40S ribosomal protein S3, putative\tTb09.160.4450\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6430\tTb927.9.6430\t\tGO:0017137\tGO_REF:0000002\tISS\t\tF\tRab geranylgeranyl transferase component A, putative\tTb09.160.4680\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7550\tADSL\t\tGO:0004018\tGO_REF:0000002\tISS\t\tF\tadenylosuccinate lyase, putative\tTb09.160.5560\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7550\tADSL\t\tGO:0006144\tGO_REF:0000002\tISS\t\tP\tadenylosuccinate lyase, putative\tTb09.160.5560\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7590\tL11\t\tGO:0000315\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L11, putative\tTb09.160.5580\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7590\tL11\t\tGO:0003735\tGO_REF:0000002\tISS\t\tF\t60S ribosomal protein L11, putative\tTb09.160.5580\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7590\tL11\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\t60S ribosomal protein L11, putative\tTb09.160.5580\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7620\tL11\t\tGO:0000315\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L11, putative\tTb09.160.5590\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7620\tL11\t\tGO:0003735\tGO_REF:0000002\tISS\t\tF\t60S ribosomal protein L11, putative\tTb09.160.5590\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7620\tL11\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\t60S ribosomal protein L11, putative\tTb09.160.5590\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8000\tTb927.9.8000\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme E2, putative\tTb09.211.0050\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8070\tQM\t\tGO:0003735\tGO_REF:0000002\tISS\t\tF\t60S ribosomal protein L10, putative\tTb09.211.0110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8070\tQM\t\tGO:0005840\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L10, putative\tTb09.211.0110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8070\tQM\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\t60S ribosomal protein L10, putative\tTb09.211.0110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8100\tTb927.9.8100\t\tGO:0003713\tGO_REF:0000002\tISS\t\tF\tnascent polypeptide associated complex subunit, putative\tTb09.211.0120\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8100\tTb927.9.8100\t\tGO:0005854\tGO_REF:0000002\tISS\t\tC\tnascent polypeptide associated complex subunit, putative\tTb09.211.0120\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8100\tTb927.9.8100\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\tnascent polypeptide associated complex subunit, putative\tTb09.211.0120\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8100\tTb927.9.8100\t\tGO:0051083\tGO_REF:0000002\tISS\t\tP\tnascent polypeptide associated complex subunit, putative\tTb09.211.0120\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8130\tTb927.9.8130\t\tGO:0003713\tGO_REF:0000002\tISS\t\tF\tnascent polypeptide associated complex subunit, putative\tTb09.211.0130\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8130\tTb927.9.8130\t\tGO:0005854\tGO_REF:0000002\tISS\t\tC\tnascent polypeptide associated complex subunit, putative\tTb09.211.0130\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8130\tTb927.9.8130\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\tnascent polypeptide associated complex subunit, putative\tTb09.211.0130\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8130\tTb927.9.8130\t\tGO:0051083\tGO_REF:0000002\tISS\t\tP\tnascent polypeptide associated complex subunit, putative\tTb09.211.0130\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8410\tJ27\t\tGO:0005739\tPMID:20660476\tISS\t\tC\tchaperone protein DnaJ, putative\tJ8|Tb09.211.0330\tmRNA\ttaxon:185431\t20130912\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8420\tTb927.9.8420\t\tGO:0003735\tGO_REF:0000002\tISS\t\tF\t60S ribosomal protein L10, putative\tTb09.211.0340\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8420\tTb927.9.8420\t\tGO:0005840\tGO_REF:0000002\tISS\t\tC\t60S ribosomal protein L10, putative\tTb09.211.0340\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8420\tTb927.9.8420\t\tGO:0006412\tGO_REF:0000002\tISS\t\tP\t60S ribosomal protein L10, putative\tTb09.211.0340\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8780\tCAE\t\tGO:0006396\tGO_REF:0000002\tISS\t\tP\tCCA-adding enzyme\tTb09.211.0590\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8780\tCAE\t\tGO:0016779\tGO_REF:0000002\tISS\t\tF\tCCA-adding enzyme\tTb09.211.0590\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8850\tTb927.9.8850\t\tGO:0005200\tGO_REF:0000002\tISS\t\tF\tactin A\tTb09.211.0620\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8850\tTb927.9.8850\t\tGO:0005737\tGO_REF:0000002\tISS\t\tC\tactin A\tTb09.211.0620\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8850\tTb927.9.8850\t\tGO:0007010\tGO_REF:0000002\tISS\t\tP\tactin A\tTb09.211.0620\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8850\tTb927.9.8850\t\tGO:0015629\tGO_REF:0000002\tISS\t\tC\tactin A\tTb09.211.0620\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8880\tTb927.9.8880\t\tGO:0005200\tGO_REF:0000002\tISS\t\tF\tactin B\tTb09.211.0630\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8880\tTb927.9.8880\t\tGO:0005737\tGO_REF:0000002\tISS\t\tC\tactin B\tTb09.211.0630\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8880\tTb927.9.8880\t\tGO:0007010\tGO_REF:0000002\tISS\t\tP\tactin B\tTb09.211.0630\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8880\tTb927.9.8880\t\tGO:0015629\tGO_REF:0000002\tISS\t\tC\tactin B\tTb09.211.0630\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8950\tFACE1\t\tGO:0016020\tPMID:11152613\tISS\t\tC\tCAAX prenyl protease 1, putative\tTb09.211.0680|AFC1|STE24\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9150\tmt-LAF13\t\tGO:0005525\tGO_REF:0000024\tISS\t\tF\tMitoribosomal LSU assembly factor 13\tMTG1|mt-RbgA|Tb09.211.0810\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9320\tMOK\t\tGO:0004674\tGO_REF:0000002\tISS\t\tF\tMAPK/MAK/MRK overlapping kinase, putative\tTb09.211.0960\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9320\tMOK\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\tMAPK/MAK/MRK overlapping kinase, putative\tTb09.211.0960\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9320\tMOK\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\tMAPK/MAK/MRK overlapping kinase, putative\tTb09.211.0960\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9670\tTbPSA6\t\tGO:0005839\tPMID:10498178\tISS\t\tC\tproteasome alpha 1 subunit, putative\tTb09.211.1250\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9840\tGCVH\t\tGO:0005960\tGO_REF:0000002\tISS\t\tC\tlipoic acid containing carrier protein, putative\tTb09.211.1380\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 } ], "gorule-0000064": [], "gorule-0000065": [ { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5050b\tTb11.02.5050b\t\tGO:0006468\tGO_REF:0000002\tISS\tInterPro:IPR000719\tP\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20040723\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0577\tTb11.v5.0577\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcasein kinase I, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1380\tTb927.1.1380\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:CSN8_DROME\tP\tserine/threonine protein phosphatase 2A regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1530\tTb927.1.1530\t\tGO:0006468\tGO_REF:0000012\tISA\tUniProtKB:Q9VDS9_DROME\tP\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3130\tTb927.1.3130\t\tGO:0006468\tGO_REF:0000002\tISA\tUniProtKB:P51957\tP\tAGC/RSK family serine/threonine kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4050\tTb927.1.4050\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:RDGC_DROME\tP\tprotein phosphatase with EF-Hand domains (PPEF)\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0006479\tGO_REF:0000002\tISA\tUniProtKB:Q99873\tP\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4690\tPRMT1-ENZ\t\tGO:0019919\tPMID:16198009\tIDA\t\tP\tProtein arginine N-methyltransferase 1 catalytic subunit\tPRMT1\tmRNA\ttaxon:185431\t20100602\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10350\tTb927.10.10350\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10670\tTb927.10.10670\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinetoplastid-specific dual specificity phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1070\tCRK1\t\tGO:0006468\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tP\tcdc2-related kinase 1\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10870\tTb927.10.10870\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11360\tFAZ33\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:P63150\tP\tFlagellum attachment zone protein 33\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11650\tTb927.10.11650\t\tGO:0006499\tPMID:16020724\tTAS\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20090325\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13010\tPKAC3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcAMP-dependent protein kinase catalytic subunit 3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13480\tTb927.10.13480\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13490\tTb927.10.13490\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13560\tERG19\t\tGO:0016310\tGO_REF:0000011\tISM\tInterPro:IPR006204\tP\tmevalonate-diphosphate decarboxylase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13780\tGSK3s\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tGlycogen synthase kinase 3 short\tLBPK4\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1380\tNEK19\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK19, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14300\tMRK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tMEKK-related kinase 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14420\tNEK16\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK16, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1460\tTb927.10.1460\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14770\tAKB1\t\tGO:0046777\tPMID:25681612\tIDA\t\tP\tAssociated kinase of Tb14-3-3\t\tmRNA\ttaxon:185431\t20150708\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14780\tCBPK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase kinase kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14800\tMPK9\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase 9, putative\tMAPK9\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15020\tDYRK\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/DYRK protein kinase, putative\tYAK\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15300\tTb927.10.15300\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCalcium/calmodulin-dependent protein kinase kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16030\tMAPK2\t\tGO:0006468\tGO_REF:0000024\tISO\tGeneDB:LmxM.19.1440\tP\tmitogen activated protein kinase 2, putative\t\tmRNA\ttaxon:185431\t20110506\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16160\tTb927.10.16160\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1620\tTb927.10.1620\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tphosphoserine/threonine/tyrosine-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1910\tTb927.10.1910\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1940\tTb927.10.1940\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL pseudokinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2040\tTb927.10.2040\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2390\tCK1.3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcasein kinase I, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3230\tTb927.10.3230\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3340\tTb927.10.3340\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.350\tBBP59\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tprotein kinase PK4, putative\tPK4\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3900\tTb927.10.3900\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.460\tNRKC\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNIMA-related protein kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4930\tTb927.10.4930\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4940\tPK50\t\tGO:0006468\tPMID:12123446\tIDA\t\tP\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0006468\tGO_REF:0000002\tISO\tGeneDB:TcCLB.506583.40\tP\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20170303\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4990\tCRK3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 3\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5140\tMPK6\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tMitogen-activated protein kinase 6\tERK8\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0006468\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tP\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20110506\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0043406\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tP\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20160115\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5270\tMKK5\t\tGO:0046777\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tP\tmitogen-activated protein kinase kinase 5\t\tmRNA\ttaxon:185431\t20160115\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5310\tAMPKa1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAMP-activated kinase, alpha 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5590\tTb927.10.5590\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5940\tNEK17-2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNEK family Serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5950\tNEK17\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK17, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0001933\tPMID:30007364\tIMP\t\tP\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20220408\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.640\tPRMT5\t\tGO:0019918\tPMID:17601874\tIDA\t\tP\targinine N-methyltransferase, type II\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6460\tTb927.10.6460\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tprotein phosphatase 2B, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6540\tTb927.10.6540\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6690\tPTP1\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:P26045\tP\tprotein tyrosine phosphatase 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.690\tTb927.10.690\t\tGO:0018345\tPMID:21193548\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7780\tKFR1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tMitogen-activated protein kinase KFR1\tMAPK1\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7940\tTb927.10.7940\t\tGO:0001510\tGO_REF:0000011\tISM\tPfam:PF01728\tP\tmethyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9250\tTb927.10.9250\t\tGO:0007190\tGO_REF:0000012\tISA\tUniProtKB:Q01518\tP\tadenylyl cyclase-associated protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10520\tKKT2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tkinetoplastid kinetochore protein 2\tTb11.01.2290\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11110\tNEK20\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK20, putative\tTb11.01.2900\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1180\tCRK6\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 6, putative\tTb11.47.0031\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12310\tCRK12\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 12\tTb11.01.4130\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12410\tKKT10\t\tGO:0006468\tPMID:32184264\tIDA\t\tP\tDual specificity protein kinase CLK1, putative\tTb11.01.4230|CLK1\tmRNA\ttaxon:185431\t20200629\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0006468\tPMID:31150492\tIDA\t\tP\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20190712\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12420\tKKT19\t\tGO:0006468\tPMID:32184264\tIDA\t\tP\tDual specificity protein kinase CLK2, putative\tTb11.01.4250|CLK2\tmRNA\ttaxon:185431\t20200629\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12480\tKKIP7\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.01.4320\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13880\tTb927.11.13880\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinetoplastid-specific protein tyrosine phosphatase, putative\tTb11.01.5450\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14270\tTb927.11.14270\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE group serine/threonine-protein kinase, putative\tTb11.01.5880\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14910\tTb927.11.14910\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\tTb11.01.6540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15010\tNEK21\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK21, putative\tTb11.01.6650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2040\tTb927.11.2040\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\tTb11.46.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2420\tTTLL6B\t\tGO:0018095\tPMID:32843576\tIMP\t\tP\tTubulin-tyrosine ligase family, putative\tTb11.02.0020\tmRNA\ttaxon:185431\t20210729\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3140\tDYRK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tdual specificity tyrosine-phosphorylation-regulated kinase 2, putative\tTb11.02.0640\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4220\tPAT6\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 6, putative\tTb11.02.1710\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4530\tARD1\t\tGO:0006474\tPMID:11163439\tTAS\t\tP\tN-acetyltransferase subunit ARD1\tTb11.02.2110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4610\tPKA-R\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR002373\tP\tprotein kinase A regulatory subunit\tTb11.02.2210|FM458|RSU\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4990\tTb927.11.4990\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tkinetoplastid-specific phospho-protein phosphatase, putative\tTb11.02.2630\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5340\tTb927.11.5340\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCell division protein kinase, putative\tTb11.02.3010\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5860\tTb927.11.5860\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAGC/RSK family serine/threonine kinase, putative\tTb11.02.3640\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6280\tPPDK\t\tGO:0016310\tGO_REF:0000011\tISM\tInterPro:IPR002192\tP\tpyruvate phosphate dikinase\tTb11.02.4150\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6690\tTb927.11.6690\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNEK family Serine/threonine-protein kinase, putative\tTb11.02.4530\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6990\tTb927.11.6990\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCalcium/calmodulin-dependent protein kinase kinase, putative\tTb11.02.4830\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7010\tTb927.11.7010\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCalcium/calmodulin-dependent protein kinase kinase, putative\tTb11.02.4860\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7160\tCRK8\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 8, putative\tTb11.02.5010\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20040723\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7320\tTb927.11.7320\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tdual specificity phopshatase, putative\tTb11.02.5220\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7360\tTb927.11.7360\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 9, putative\tTb11.02.5260\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.760\tTb927.11.760\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000222\tP\tprotein phosphatase 2C, putative\tTb11.03.0390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.790\tTb927.11.790\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAGC/RSK family serine/threonine kinase, putative\tTb11.03.0340\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7950\tTb927.11.7950\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinetoplastid-specific dual specificity phosphatase, putative\tTb11.02.5810\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8150\tTb927.11.8150\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tULK family pseudokinase, putative\tTb11.01.0400\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8170\tMPK8\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tMitogen-activated protein kinase 8, putative\tTb11.01.0380\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8220\tAUK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\taurora B kinase\tTb11.01.0330\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.850\tTb927.11.850\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAtypical serine/threonine protein kinase BUD32, putative\tTb11.03.0290\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0006468\tPMID:20833891\tIDA\t\tP\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0046777\tPMID:20833891\tIDA\t\tP\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9190\tVPS15\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase VPS15\tTb11.01.0930\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1820\tTb927.2.1820\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2120\tNEK22\t\tGO:0006468\tGO_REF:0000011\tISM\t\tP\tMitogen-activated kinase kinase kinase, putative\t25N14.205\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2430\tCK2A2\t\tGO:0006468\tGO_REF:0000012\tISA\tUniProtKB:P40231\tP\tcasein kinase II, alpha chain\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2720\tFlaK\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE7 protein kinase, putative\tMEKK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4200\tTb927.2.4200\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/CLK family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4280\tTb927.2.4280\t\tGO:0006470\tGO_REF:0000024\tISS\t\tP\tkinetoplastid-specific dual specificity phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4510\tCRK9\t\tGO:0006468\tPMID:32068297\tIMP\t\tP\tcdc2-related kinase 9\t\tmRNA\ttaxon:185431\t20200722\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4870\tTb927.2.4870\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinetoplastid-specific dual specificity phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5050\tTb927.2.5050\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5230\tTb927.2.5230\t\tGO:0006468\tGO_REF:0000024\tISS\t\tP\tCAMK family pseudokinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1240\tTb927.3.1240\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tSerine/threonine-protein phosphatase 2A, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1570\tLBPK3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcalcium/calmodulin-dependent protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1610\tTb927.3.1610\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/CLK family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0006468\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tP\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1850\tTb927.3.1850\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/MAPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2060\tTb927.3.2060\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE20-like serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2110\tTIM50\t\tGO:0001933\tPMID:31391278\tIMP\t\tP\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20191125\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2400\tTb927.3.2400\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 10, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2440\tAEK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAGC essential kinase 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2690\tTb927.3.2690\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAGC/RSK family serine/threonine kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3080\tNEK6\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tserine/threonine-protein kinase Nek, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3190\tNEK7\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK7, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3290\tTb927.3.3290\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3920\tAUK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tserine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4490\tTb927.3.4490\t\tGO:0018342\tPMID:9719512\tIDA\t\tP\tprotein farnesyltransferase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4560\tTb927.3.4560\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4670\tCRK10\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 10, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4860\tMKK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase kinase 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4940\tTb927.3.4940\t\tGO:0018171\tPMID:21247153\tISO\tGeneDB:TcCLB.507951.299\tP\t5-histidylcysteine sulfoxide synthase, putative\t\tmRNA\ttaxon:185431\t20110531\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5380\tTTLL6A\t\tGO:0018095\tPMID:32843576\tIMP\t\tP\tTubulin-tyrosine ligase family, putative\t\tmRNA\ttaxon:185431\t20210729\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5650\tTb927.3.5650\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.690\tTb927.3.690\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/RCK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1700\tTb927.4.1700\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCK1/TTBK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1870\tTb927.4.1870\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tSerine/threonine-protein phosphatase 2A catalytic subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2110\tTb927.4.2110\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2460\tTb927.4.2460\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tPseudokinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2500\tEIF2AK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\teukaryotic translation initiation factor 2-alpha kinase 2\tK2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2500\tEIF2AK2\t\tGO:0010998\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506559.129|GeneDB:LinJ.34.1910\tP\teukaryotic translation initiation factor 2-alpha kinase 2\tK2\tmRNA\ttaxon:185431\t20160801\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2500\tEIF2AK2\t\tGO:0010999\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506559.129\tP\teukaryotic translation initiation factor 2-alpha kinase 2\tK2\tmRNA\ttaxon:185431\t20160801\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3420\tWEE1\t\tGO:0038083\tPMID:24223931\tIDA\t\tP\twee1-like protein kinase\t\tmRNA\ttaxon:185431\t20131122\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3420\tWEE1\t\tGO:0045736\tGO_REF:0000002\tISS\tUniProtKB:WEE2_MOUSE\tP\twee1-like protein kinase\t\tmRNA\ttaxon:185431\t20131122\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3420\tWEE1\t\tGO:0046777\tPMID:24223931\tIDA\t\tP\twee1-like protein kinase\t\tmRNA\ttaxon:185431\t20131122\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3560\tTb927.4.3560\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tprotein phoshatase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3610\tTb927.4.3610\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tprotein phosphatase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3620\tPP1-6\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tserine threonine-protein phosphatase PP1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3630\tPP1-5\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tserine threonine-protein phosphatase PP1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3640\tPP1-4\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tserine threonine-protein phosphatase PP1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3770\tTb927.4.3770\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcalcium/calmodulin-dependent protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4330\tALPH2\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tApaH-like phosphatase ALPH2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4590\tTb927.4.4590\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAGC family serine/threonine kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5180\tTLK1\t\tGO:0006468\tPMID:17940067\tIDA\t\tP\ttousled-like kinase I\tLBPK1\tmRNA\ttaxon:185431\t20220408\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5180\tTLK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\ttousled-like kinase I\tLBPK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5310\tRDK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tRepressor of differentiation kinase 2\tNEK12.2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5390\tNRKA\t\tGO:0006468\tPMID:8515773\tISM\t\tP\tserine/threonine-protein kinase NrkA\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1650\tTb927.5.1650\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/DYRK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1660\tPDP\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tpyruvate dehydrogenase phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2820\tNEK6\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK6, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3150\tTb927.5.3150\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tprotein kinase , putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3160\tTb927.5.3160\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/CLK family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3960\tPRMT6\t\tGO:0019919\tPMID:20418380\tIDA\t\tP\targinine N-methyltransferase, type I\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4380\tKPP1\t\tGO:0006470\tPMID:29666191\tIMP\t\tP\tKinetoplastid-specific Protein Phosphatase 1\t\tmRNA\ttaxon:185431\t20180817\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4380\tKPP1\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tKinetoplastid-specific Protein Phosphatase 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4430\tTb927.5.4430\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcalcium/calmodulin-dependent protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.790\tCK1.1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcasein kinase I isoform 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.800\tCK1.2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcasein kinase I, isoform 2\tLBPK2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1780\tMAPK4\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen activated protein kinase 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1800\tTb927.6.1800\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2030\tTb927.6.2030\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2250\tRAC\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\trac serine-threonine kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2450\tPKB\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tProtein kinase B, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2980\teIF2K3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tEukaryotic translation initiation factor 2-alpha kinase 3, putative\teIF2AK3|PK3\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3110\tCRK11\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3430\tNEK10\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK10, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4220\tMAPK5\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase 5\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4630\tTb927.6.4630\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4970\tTb927.6.4970\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tserine/arginine-rich protein specific kinase SRPK, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.640\tALPH1\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.750\tTb927.6.750\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tkinetoplastid-specific phospho-protein phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1900\tCRK7\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related protein kinase 7, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2420\tGSK3A\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tglycogen synthase kinase-3 alpha, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2750\tTb927.7.2750\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcalcium/calmodulin-dependent protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3210\tTb927.7.3210\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tPseudokinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3580\tNEK11\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK11, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3650\tTb927.7.3650\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3880\tBBP87\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/DYRK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4020\tTb927.7.4020\t\tGO:0016311\tGO_REF:0000011\tISM\tPfam:PF00481\tP\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4090\tTb927.7.4090\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/DYRK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.460\tPFT\t\tGO:0018342\tPMID:9719512\tIDA\t\tP\tprotein farnesyltransferase beta subunit\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5220\tTb927.7.5220\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tForkhead Kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5490\tPRMT7\t\tGO:0018216\tPMID:19254949\tIDA\t\tP\targinine N-methyltransferase, type III\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5490\tPRMT7\t\tGO:0035246\tGO_REF:0000024\tISO\tGeneDB:LmjF.06.0870\tP\targinine N-methyltransferase, type III\t\tmRNA\ttaxon:185431\t20160125\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5770\tPK53\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNuclear Dbf2-related kinase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6220\tTb927.7.6220\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcalcium/calmodulin-dependent protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6310\tPLK\t\tGO:0006468\tPMID:26929336\tIDA\t\tP\tpolo-like protein kinase\t\tmRNA\ttaxon:185431\t20160713\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6310\tPLK\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000959\tP\tpolo-like protein kinase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6680\tTb927.7.6680\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7360\tCRK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcdc2-related kinase 2\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.960\tTb927.7.960\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCMGC/SRPK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1100\tTb927.8.1100\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1670\tNEK14\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK14, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1690\tNEK14\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK14, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1780\tTb927.8.1780\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE7 protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2500\tTb927.8.2500\t\tGO:0001510\tGO_REF:0000011\tISM\tPfam:PF01728\tP\tribosomal RNA methyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3400\tTb927.8.3400\t\tGO:0018345\tPMID:21193548\tISM\tPfam:PF01529\tP\tpalmitoyl acyltransferase 12, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4260\tTb927.8.4260\t\tGO:0006468\tGO_REF:0000002\tISM\tInterPro:IPR008266|PANTHER:PTHR23257|Prosite:PS00108\tP\tserine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20131125\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5390\tCRK4\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcell division control protein 2 homolog 4\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5500\tTb927.8.5500\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcalcium/calmodulin-dependent protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5730\tSLK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE20-like serine/threonine-protein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5780\tTb927.8.5780\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000387\tP\tphosphatase of regenerating liver-type phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5950\tMKK4\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase kinase 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6490\tBBP122\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCalcium/calmodulin-dependent protein kinase kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6810\tTb927.8.6810\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6930\tNRKB\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tserine/threonine-protein kinase NRKB, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7110\tNEK12.1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK12.1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7220\tTLK2\t\tGO:0006468\tPMID:17940067\tIDA\t\tP\ttousled-like kinase II\t\tmRNA\ttaxon:185431\t20220408\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7220\tTLK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\ttousled-like kinase II\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7390\tTb927.8.7390\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tprotein phosphatase 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7450\tTb927.8.7450\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR004166\tP\tmyosin heavy chain kinase A, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8040:mRNA\tALPH3\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tApaH-like phosphatase ALPH3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.870:mRNA\tTb927.8.870\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10920\tKKT3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tProtein kinase PK6, putative\tTb09.211.2260|PK6\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11100\tPKAC1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcAMP-dependent protein kinase catalytic subunit 1\tTb09.211.2410\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12400\tTb927.9.12400\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\tTb09.211.3410\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12880\tSLK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE20-like serine/threonine-protein kinase 2, putative\tTb09.211.3820\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14430\tCK2A1\t\tGO:0006468\tPMID:11755190\tIDA\t\tP\tCasein kinase II\tTb09.211.4890\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1500\tNEK15\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK15, putative\tTb09.160.0450\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1540\tTb927.9.1540\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tprotein phosphatase 2B, putative\tTb09.160.0480\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1570\tTb927.9.1570\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcalcium/calmodulin-dependent protein kinase, putative\tTb09.160.0500\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1670\tAUK3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tAurora kinase 3, putative\tTb09.160.0570\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.2140\tTb927.9.2140\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcalcium/calmodulin-dependent protein kinase, putative\tTb09.160.0930\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.2240\tTb927.9.2240\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tPseudokinase, putative\tTb09.160.0990\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.2350\tTb927.9.2350\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\tcalcium/calmodulin-dependent protein kinase, putative\tTb09.160.1090\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.3120\tTb927.9.3120\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\tTb09.160.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4910\tPDK1\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\t3-phosphoinositide-dependent protein kinase 1, putative\tTb09.160.3480\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6090\tTb927.9.6090\t\tGO:0006470\tPMID:20551176\tIDA\t\tP\tPTP1-interacting protein, 39 kDa\tTb09.160.4460\tmRNA\ttaxon:185431\t20110105\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6100\tPIP39\t\tGO:0006470\tPMID:20551176\tIDA\t\tP\tPTP1-interacting protein, 39 kDa\tTb09.160.4480\tmRNA\ttaxon:185431\t20171123\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6560\tTb927.9.6560\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tNAK family pseudokinase, putative\tTb09.160.4770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7700\tTb927.9.7700\t\tGO:0018345\tPMID:21193548\tISM\tInterPro:IPR001594\tP\tpalmitoyl acyltransferase 1, putative\tTb09.160.5650\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9320\tMOK\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\tMAPK/MAK/MRK overlapping kinase, putative\tTb09.211.0960\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9990\tTb927.9.9990\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinetoplastid-specific dual specificity phosphatase, putative\tTb09.211.1530\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 } ], "gorule-0000013": [ { "level": "ERROR", "line": "TriTrypDB\tTb927.1.1130\tTb927.1.1130\t\tGO:0009331\tGO_REF:0000012\tISA\tUniProtKB:GPDM_MOUSE\tC\tglycerol-3-phosphate dehydrogenase (FAD-dependent), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000013: Taxon-appropriate annotation check", "obj": "", "taxon": "", "rule": 13 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.3530\tG3PDH\t\tGO:0009331\tGO_REF:0000011\tISM\tPfam:PF01210\tC\tglycerol-3-phosphate dehydrogenase [NAD+], glycosomal\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000013: Taxon-appropriate annotation check", "obj": "", "taxon": "", "rule": 13 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0070531\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20130904\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000013: Taxon-appropriate annotation check", "obj": "", "taxon": "", "rule": 13 } ], "gorule-0000027": [ { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5050b\tTb11.02.5050b\t\tGO:0004674\tGO_REF:0000002\tISS\tInterPro:IPR008271\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20040723\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5050b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5050b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5050b\tTb11.02.5050b\t\tGO:0005524\tGO_REF:0000002\tISS\tInterPro:IPR000719\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20040723\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5050b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5050b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5050b\tTb11.02.5050b\t\tGO:0006468\tGO_REF:0000002\tISS\tInterPro:IPR000719\tP\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20040723\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5050b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5050b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5060b\tTb11.02.5060b\t\tGO:0003677\tGO_REF:0000002\tISS\tInterPro:IPR000330\tF\tSNF2 DNA repair protein, putative\t\tmRNA\ttaxon:185431\t20041001\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5060b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5060b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5060b\tTb11.02.5060b\t\tGO:0005524\tGO_REF:0000002\tISS\tInterPro:IPR000330|InterPro:IPR001650\tF\tSNF2 DNA repair protein, putative\t\tmRNA\ttaxon:185431\t20041001\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5060b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5060b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5060b\tTb11.02.5060b\t\tGO:0006338\tGO_REF:0000002\tISS\tGB:AAF24984.1\tP\tSNF2 DNA repair protein, putative\t\tmRNA\ttaxon:185431\t20041001\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GB not found in list of database names in dbxrefs", "obj": "GB:AAF24984.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5060b\tTb11.02.5060b\t\tGO:0006338\tGO_REF:0000002\tISS\tGB:AAF24984.1\tP\tSNF2 DNA repair protein, putative\t\tmRNA\ttaxon:185431\t20041001\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5060b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5060b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5090b\tTb11.02.5090b\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tproliferator-activated receptor-interacting protein (PRIP) interacting protein (PIMT), putative, pseudogene\t\tpseudogenic_transcript\ttaxon:185431\t20170912\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5090b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5090b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5100b\tTb11.02.5100b\t\tGO:0005739\tPMID:20660476\tISS\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20130725\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5100b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5100b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5105b\tTb11.02.5105b\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5105b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5105b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5110b\tTb11.02.5110b\t\tGO:0000808\tGO_REF:0000002\tISS\tUniProt:O16810\tC\torigin recognition complex subunit 1 (ORC1), putative\t\tmRNA\ttaxon:185431\t20041206\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5110b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5110b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5110b\tTb11.02.5110b\t\tGO:0003677\tGO_REF:0000002\tISS\tUniProt:O16810\tF\torigin recognition complex subunit 1 (ORC1), putative\t\tmRNA\ttaxon:185431\t20041206\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5110b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5110b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5110b\tTb11.02.5110b\t\tGO:0006260\tGO_REF:0000002\tISS\tUniProt:O16810\tP\torigin recognition complex subunit 1 (ORC1), putative\t\tmRNA\ttaxon:185431\t20041206\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5110b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5110b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5120b\tTb11.02.5120b\t\tGO:0003723\tPMID:18951088\tISO\tGeneDB:Tb927.11.7218\tF\tmitochondrial edited mRNA stability factor 1 subunit, putative\t\tmRNA\ttaxon:185431\t20130730\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5120b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5120b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5120b\tTb11.02.5120b\t\tGO:0048255\tPMID:18951088\tISO\tGeneDB:Tb927.11.7218\tP\tmitochondrial edited mRNA stability factor 1 subunit, putative\t\tmRNA\ttaxon:185431\t20130730\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5120b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5120b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0000178\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5380\tC\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20091113\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5380b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5380b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0004540\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5380\tF\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20091113\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5380b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5380b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0005085\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5380\tF\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20091113\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5380b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5380b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5380b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5380b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0005739\tPMID:15223320\tISO\tGeneDB:Tb11.02.5380\tC\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20130725\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5380b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5380b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5380b\tTb11.02.5380b\t\tGO:0006364\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5380\tP\texosome complex exonuclease RRP44p homologue, putative\t\tmRNA\ttaxon:185431\t20091113\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5380b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5380b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390b\tTb11.02.5390b\t\tGO:0000963\tPMID:18073385\tISO\tGeneDB:Tb11.02.5390\tP\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5390b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5390b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390b\tTb11.02.5390b\t\tGO:0003729\tPMID:18073385\tISO\tGeneDB:Tb11.02.5390\tF\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5390b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5390b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5390b\tTb11.02.5390b\t\tGO:0005739\tPMID:20660476|PMID:18073385\tISO\tGeneDB:Tb11.02.5390\tC\tmRNA processing protein, putative\t\tmRNA\ttaxon:185431\t20130725\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5390b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5390b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400\tTb11.02.5400\t\tGO:0004122\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137\tF\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TIGR_TIGRFAMS not found in list of database names in dbxrefs", "obj": "TIGR_TIGRFAMS:TIGR01137", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400\tTb11.02.5400\t\tGO:0019344\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137\tP\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TIGR_TIGRFAMS not found in list of database names in dbxrefs", "obj": "TIGR_TIGRFAMS:TIGR01137", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400b\tTb11.02.5400b\t\tGO:0004122\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137|GeneDB:Tb11.02.5400\tF\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TIGR_TIGRFAMS not found in list of database names in dbxrefs", "obj": "TIGR_TIGRFAMS:TIGR01137", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400b\tTb11.02.5400b\t\tGO:0004122\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137|GeneDB:Tb11.02.5400\tF\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5400b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5400b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400b\tTb11.02.5400b\t\tGO:0019344\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137|GeneDB:Tb11.02.5400\tP\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TIGR_TIGRFAMS not found in list of database names in dbxrefs", "obj": "TIGR_TIGRFAMS:TIGR01137", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5400b\tTb11.02.5400b\t\tGO:0019344\tGO_REF:0000002\tISS\tTIGR_TIGRFAMS:TIGR01137|GeneDB:Tb11.02.5400\tP\tcystathionine beta-synthase, putative\t\tmRNA\ttaxon:185431\t20120801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5400b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5400b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5410b\tTb11.02.5410b\t\tGO:0003824\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5410\tF\tubiquitin activating enzyme, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5410b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5410b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420b\tTb11.02.5420b\t\tGO:0016021\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5420\tC\tNADPH-cytochrome p450 reductase, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5420b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5420b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420b\tTb11.02.5420b\t\tGO:0016491\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5420\tF\tNADPH-cytochrome p450 reductase, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.02.5420b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.02.5420b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0002082\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tP\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj28_V3.1070 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj28_V3.1070", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0002082\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tP\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.0400 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.0400", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0005743\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj28_V3.1070 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj28_V3.1070", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0005743\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.0400 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.0400", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0005743\tPMID:19834910\tRCA\t\tC\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20091020\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.0400 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.0400", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0070069\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj28_V3.1070 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj28_V3.1070", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.0400\tP27\t\tGO:0070069\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\t\tmRNA\ttaxon:185431\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.0400 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.0400", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:0000281\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.1380 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.1380", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:0005856\tPMID:35447115\tIDA\t\tC\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.1380 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.1380", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:0032991\tPMID:35447115\tIPI\t\tC\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.1380 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.1380", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:0050821\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.1380 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.1380", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1380\tCAP46\t\tGO:1903673\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 46 kDa\t\tmRNA\ttaxon:185431\t20220429\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.1380 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.1380", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.1790\tTb11.1790\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tretrotransposon hot spot protein (RHS, pseudogene), putative\t\tpseudogenic_transcript\ttaxon:185431\t20170912\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb11.1790 does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb11.1790", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0149\tTb11.v5.0149\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0149\tTb11.v5.0149\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0149\tTb11.v5.0149\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0233\tTb11.v5.0233\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0233\tTb11.v5.0233\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0233\tTb11.v5.0233\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0534\tTb11.v5.0534\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0534\tTb11.v5.0534\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0534\tTb11.v5.0534\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tprotein kinase, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0539\tBBS4\t\tGO:0034452\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tBardet-Biedl syndrome 4 protein, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0539\tBBS4\t\tGO:0034464\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tC\tBardet-Biedl syndrome 4 protein, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0539\tBBS4\t\tGO:0043014\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tBardet-Biedl syndrome 4 protein, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.v5.0539\tBBS4\t\tGO:0048487\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tBardet-Biedl syndrome 4 protein, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1130\tTb927.1.1130\t\tGO:0006072\tGO_REF:0000012\tISA\tUniProtKB:GPDM_MOUSE\tP\tglycerol-3-phosphate dehydrogenase (FAD-dependent), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GPDM_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GPDM_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1130\tTb927.1.1130\t\tGO:0009331\tGO_REF:0000012\tISA\tUniProtKB:GPDM_MOUSE\tC\tglycerol-3-phosphate dehydrogenase (FAD-dependent), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GPDM_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GPDM_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1140\tTb927.1.1140\t\tGO:0032880\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tP\tTransmembrane protein 231, putative\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TM231_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TM231_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1140\tTb927.1.1140\t\tGO:0035869\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tC\tTransmembrane protein 231, putative\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TM231_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TM231_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1140\tTb927.1.1140\t\tGO:0060170\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tC\tTransmembrane protein 231, putative\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TM231_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TM231_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1140\tTb927.1.1140\t\tGO:0060271\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tP\tTransmembrane protein 231, putative\t\tmRNA\ttaxon:185431\t20140801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TM231_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TM231_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1150\tTb927.1.1150\t\tGO:0005200\tGO_REF:0000012\tISA\tUniProtKB:TBG1_HUMAN\tF\tzeta tubulin\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TBG1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TBG1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1270\tTb927.1.1270\t\tGO:0000096\tGO_REF:0000012\tISA\tUniProtKB:MHT1_YEAST\tP\thomocysteine S-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MHT1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MHT1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1370\tTb927.1.1370\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:RRP5_YEAST\tF\trRNA biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRP5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRP5_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1370\tTb927.1.1370\t\tGO:0006364\tGO_REF:0000012\tISA\tUniProtKB:RRP5_YEAST\tP\trRNA biogenesis protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRP5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRP5_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1380\tTb927.1.1380\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:CSN8_DROME\tP\tserine/threonine protein phosphatase 2A regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CSN8_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CSN8_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1380\tTb927.1.1380\t\tGO:0008287\tGO_REF:0000012\tISA\tUniProtKB:CSN8_DROME\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CSN8_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CSN8_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1530\tTb927.1.1530\t\tGO:0004672\tGO_REF:0000012\tISA\tUniProtKB:M3K1_ARATH\tF\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: M3K1_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:M3K1_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1530\tTb927.1.1530\t\tGO:0006468\tGO_REF:0000012\tISA\tUniProtKB:Q9VDS9_DROME\tP\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9VDS9_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9VDS9_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1560\tTb927.1.1560\t\tGO:0016887\tGO_REF:0000012\tISA\tUniProtKB:SEC18_YEAST\tF\tvesicular-fusion protein nsf, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SEC18_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SEC18_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1580\tTb927.1.1580\t\tGO:0005507\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tF\tcytochrome c oxidase assembly factor, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SCO2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SCO2_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1580\tTb927.1.1580\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tC\tcytochrome c oxidase assembly factor, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SCO2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SCO2_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1580\tTb927.1.1580\t\tGO:0008535\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tP\tcytochrome c oxidase assembly factor, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SCO2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SCO2_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1620\tTb927.1.1620\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:DDX51_DROME\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DDX51_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DDX51_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1980\tTb927.1.1980\t\tGO:0005789\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\t\tmRNA\ttaxon:185431\t20140812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YIF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YIF1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1980\tTb927.1.1980\t\tGO:0006888\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tP\tprotein transport protein YIF1, putative\t\tmRNA\ttaxon:185431\t20140812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YIF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YIF1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1980\tTb927.1.1980\t\tGO:0030134\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\t\tmRNA\ttaxon:185431\t20140812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YIF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YIF1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1980\tTb927.1.1980\t\tGO:0030173\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\t\tmRNA\ttaxon:185431\t20140812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YIF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YIF1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2430\tH3\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: H3_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:H3_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2450\tTb927.1.2450\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: H3_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:H3_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2470\tTb927.1.2470\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: H3_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:H3_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2490\tTb927.1.2490\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: H3_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:H3_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2510\tTb927.1.2510\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: H3_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:H3_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2530\tTb927.1.2530\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: H3_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:H3_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2550\tTb927.1.2550\t\tGO:0003677\tGO_REF:0000012\tISA\tUniProtKB:H3_DROME\tF\thistone H3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: H3_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:H3_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3000\tTb927.1.3000\t\tGO:0006508\tGO_REF:0000012\tISA\tUniProtKB:ILL2_ARATH\tP\tamidohydrolase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ILL2_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ILL2_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3000\tTb927.1.3000\t\tGO:0016787\tGO_REF:0000012\tISA\tUniProtKB:ILL2_ARATH\tF\tamidohydrolase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ILL2_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ILL2_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3110\tTb927.1.3110\t\tGO:0005483\tGO_REF:0000012\tISA\tUniProtKB:SNAP_DROME\tF\tsoluble N-ethylmaleimide sensitive factor (NSF) attachment protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SNAP_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SNAP_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3130\tTb927.1.3130\t\tGO:0004672\tGO_REF:0000012\tISA\tUniProtKB:GIN4_YEAST\tF\tAGC/RSK family serine/threonine kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GIN4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GIN4_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3200\tSGT1\t\tGO:0000151\tGO_REF:0000012\tISA\tUniProtKB:SGT1_YEAST\tC\tSuppressor of G2 allele of SKP1, putative\t\tmRNA\ttaxon:185431\t20140818\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SGT1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SGT1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3230\tTb927.1.3230\t\tGO:0005524\tGO_REF:0000012\tISA\tUniProtKB:CD48D_ARATH\tF\tcell division cycle protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CD48D_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CD48D_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0015991\tGO_REF:0000012\tISA\tUniProtKB:VATF_YEAST\tP\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: VATF_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:VATF_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0046961\tGO_REF:0000012\tISA\tUniProtKB:VATF_YEAST\tF\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: VATF_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:VATF_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4050\tTb927.1.4050\t\tGO:0004722\tGO_REF:0000012\tISA\tUniProtKB:RDGC_DROME\tF\tprotein phosphatase with EF-Hand domains (PPEF)\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RDGC_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RDGC_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4050\tTb927.1.4050\t\tGO:0006470\tGO_REF:0000012\tISA\tUniProtKB:RDGC_DROME\tP\tprotein phosphatase with EF-Hand domains (PPEF)\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RDGC_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RDGC_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4050\tTb927.1.4050\t\tGO:0008287\tGO_REF:0000012\tISA\tUniProtKB:PPP5_ARATH\tC\tprotein phosphatase with EF-Hand domains (PPEF)\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PPP5_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PPP5_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4100\tCOXIV\t\tGO:0005751\tPMID:12467979\tISO\tGeneDB:LtaP12.0690\tC\tcytochrome oxidase subunit IV\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LtaP12.0690 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LtaP12.0690", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4420\tTb927.1.4420\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:MDR1B_MOUSE\tP\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MDR1B_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MDR1B_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4420\tTb927.1.4420\t\tGO:0042626\tGO_REF:0000012\tISA\tUniProtKB:AB9B_ARATH\tF\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AB9B_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AB9B_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4420\tTb927.1.4420\t\tGO:0043190\tGO_REF:0000012\tISA\tUniProtKB:AB9B_ARATH\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AB9B_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AB9B_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.540\tRPC128\t\tGO:0003899\tGO_REF:0000012\tISA\tUniProtKB:RPC2_YEAST\tF\tDNA-directed RNA polymerase III, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RPC2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RPC2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.540\tRPC128\t\tGO:0005666\tGO_REF:0000012\tISA\tUniProtKB:RPC2_YEAST\tC\tDNA-directed RNA polymerase III, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RPC2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RPC2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.540\tRPC128\t\tGO:0006383\tGO_REF:0000012\tISA\tUniProtKB:RPC2_YEAST\tP\tDNA-directed RNA polymerase III, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RPC2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RPC2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.580\tTb927.1.580\t\tGO:0015114\tGO_REF:0000012\tISA\tUniProtKB:PHT21_ARATH\tF\tphosphate-repressible phosphate permease, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PHT21_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PHT21_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.600\tTb927.1.600\t\tGO:0015114\tGO_REF:0000012\tISA\tUniProtKB:PHT21_ARATH\tF\tphosphate-repressible phosphate permease, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PHT21_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PHT21_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.870\tDHSp\t\tGO:0008612\tGO_REF:0000012\tISA\tUniProtKB:DHYS_DROME\tP\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DHYS_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DHYS_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10320\tTb927.10.10320\t\tGO:0005875\tGO_REF:0000012\tISA\tUniProtKB:DYLT_DROME\tC\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DYLT_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DYLT_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10320\tTb927.10.10320\t\tGO:0007017\tGO_REF:0000012\tISA\tUniProtKB:DYLT1_MOUSE\tP\tdynein light chain Tctex-type, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DYLT1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DYLT1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10390\tTR\t\tGO:0015042\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01423\tF\ttrypanothione reductase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01423", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10700\tPRP31\t\tGO:0003723\tPMID:11166385\tISA\tUniProtKB:AAK09083\tF\tsplicing factor Prp31\t\tmRNA\ttaxon:185431\t20090507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAK09083 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAK09083", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10700\tPRP31\t\tGO:0008380\tPMID:11166385\tISA\tUniProtKB:AAK09083\tP\tsplicing factor Prp31\t\tmRNA\ttaxon:185431\t20090507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAK09083 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAK09083", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10870\tTb927.10.10870\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tCMGC family protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11020\tMSH2\t\tGO:0005515\tPMID:32373549\tIPI\tGeneDB:MSH6|GeneDB:Tb927.9.5240\tF\tDNA mismatch repair protein MSH2, putative\t\tmRNA\ttaxon:185431\t20200522\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MSH6 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:MSH6", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11540\tRPS3\t\tGO:0042254\tGO_REF:0000012\tISA\tUniProtKB:RS3_DROME\tP\t40S ribosomal protein S3, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RS3_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RS3_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11590\tTb927.10.11590\t\tGO:0004516\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01514\tF\tnicotinate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01514", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11590\tTb927.10.11590\t\tGO:0019358\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01514\tP\tnicotinate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01514", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11980\tTb927.10.11980\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9GU66_DROME\tC\tQA-SNARE protein putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9GU66_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9GU66_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1210\tTb927.10.1210\t\tGO:0008352\tGO_REF:0000012\tISA\tUniProtKB:E1JJ62_DROME\tC\tkatanin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: E1JJ62_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:E1JJ62_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12210\tTb927.10.12210\t\tGO:0004750\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01163\tF\tribulose-5-phosphate 3-epimerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01163", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12210\tTb927.10.12210\t\tGO:0006098\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01163\tP\tribulose-5-phosphate 3-epimerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01163", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12370\tGCS\t\tGO:0000302\tPMID:19818018\tIMP\tGeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase\t\tmRNA\ttaxon:185431\t20100222\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj18_V3.1660 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj18_V3.1660", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12370\tGCS\t\tGO:0006750\tPMID:19818018\tIMP\tGeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase\t\tmRNA\ttaxon:185431\t20100222\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj18_V3.1660 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj18_V3.1660", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12370\tGCS\t\tGO:0019342\tPMID:19818018\tIMP\tGeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase\t\tmRNA\ttaxon:185431\t20100222\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj18_V3.1660 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj18_V3.1660", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12500\tTb927.10.12500\t\tGO:0005524\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01647\tF\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01647", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12500\tTb927.10.12500\t\tGO:0005886\tGO_REF:0000012\tISA\tUniProtKB:PMA1_YEAST\tC\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PMA1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PMA1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12510\tTb927.10.12510\t\tGO:0005524\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01647\tF\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01647", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1260\tTb927.10.1260\t\tGO:0004816\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00457\tF\taspartyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00457", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1260\tTb927.10.1260\t\tGO:0006421\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00457\tP\taspartyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00457", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12980\tTb927.10.12980\t\tGO:0030488\tGO_REF:0000012\tISA\tUniProtKB:NCL1_YEAST\tP\tMultisite-specific tRNA:(cytosine-C(5))-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20140918\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NCL1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NCL1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13040\tACP4\t\tGO:0004016\tPMID:24879126\tIGI\tUniProtKB:CYAA_YEAST\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20150609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CYAA_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CYAA_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13270\tTb927.10.13270\t\tGO:0030515\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tF\tPeriodic tryptophan protein 2 homolog, putative\t\tmRNA\ttaxon:185431\t20140918\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PWP2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PWP2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13270\tTb927.10.13270\t\tGO:0032040\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tC\tPeriodic tryptophan protein 2 homolog, putative\t\tmRNA\ttaxon:185431\t20140918\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PWP2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PWP2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13270\tTb927.10.13270\t\tGO:0034388\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tC\tPeriodic tryptophan protein 2 homolog, putative\t\tmRNA\ttaxon:185431\t20140918\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PWP2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PWP2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0004422\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tF\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01203", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1390\tHGXPRT\t\tGO:0006166\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tP\tHypoxanthine-guanine-xanthine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01203", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0004422\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tF\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01203", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1400\tHGPRT\t\tGO:0006166\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tP\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01203", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tF\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0007059\tGO_REF:0000050\tISM\tJCVI_TIGRFAMS:TIGR02168\tP\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20140919\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR02168", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0007088\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tP\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0030529\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tC\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0042175\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tC\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0051321\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tP\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14180\tSEC13\t\tGO:0006900\tPMID:8432727\tISA\tUniProtKB:SEC13_YEAST\tP\tprotein transport protein SEC13\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SEC13_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SEC13_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14200\tTb927.10.14200\t\tGO:0016020\tGO_REF:0000012\tISA\tUniProtKB:STX5_MOUSE\tC\tsyntaxin 5\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: STX5_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:STX5_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14360\tU2_40K\t\tGO:0045292\tPMID:8458336\tISS\tUniProtKB:RU2A_HUMAN\tP\tU2 small nuclear ribonucleoprotein 40K\tU2A\tmRNA\ttaxon:185431\t20130822\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RU2A_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RU2A_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14580\tTb927.10.14580\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01038\tF\t60S ribosomal protein L17, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01038", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14580\tTb927.10.14580\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01038\tP\t60S ribosomal protein L17, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01038", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0004422\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tF\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01203", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1470\tHGPRT\t\tGO:0006166\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01203\tP\thypoxanthine-guanine phosphoribosyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01203", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14810\tmbf1\t\tGO:0003713\tGO_REF:0000002\tISS\tUniProtKB:MBF1_YEAST\tF\tmultiprotein-bridging factor 1, putative\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MBF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MBF1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14810\tmbf1\t\tGO:0045944\tGO_REF:0000002\tISS\tUniProtKB:MBF1_YEAST\tP\tmultiprotein-bridging factor 1, putative\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MBF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MBF1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14980\tIFT52\t\tGO:0042073\tGO_REF:0000012\tISA\tUniProtKB:Q944U2_CHLRE\tP\tintraflagellar transport protein 52\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q944U2_CHLRE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q944U2_CHLRE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1500\tMetRS\t\tGO:0004825\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00398\tF\tmethionyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00398", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1500\tMetRS\t\tGO:0006431\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00398\tP\tmethionyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00398", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15010\tTb927.10.15010\t\tGO:0009107\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00510\tP\tlipoic acid synthetase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00510", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15010\tTb927.10.15010\t\tGO:0016992\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00510\tF\tlipoic acid synthetase, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20131007\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00510", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15120\tTb927.10.15120\t\tGO:0003735\tGO_REF:0000012\tISA\tUniProtKB:RS132_ARATH\tF\t40S ribosomal protein S13, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RS132_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RS132_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15410\tgMDH\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01772\tP\tglycosomal malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01772", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15490\tGMD\t\tGO:0000271\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01472\tP\tGDP-mannose 4,6 dehydratase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01472", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15490\tGMD\t\tGO:0008446\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01472\tF\tGDP-mannose 4,6 dehydratase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01472", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1550\tRPN5\t\tGO:0004175\tPMID:11854272\tIGI\tUniProtKB:RPN5_YEAST\tF\tproteasome regulatory non-ATP-ase subunit 5\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RPN5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RPN5_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15590\tMIP\t\tGO:0003755\tGO_REF:0000012\tISA\tUniProtKB:F6X9I3_MOUSE\tF\tmacrophage infectivity potentiator, precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: F6X9I3_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:F6X9I3_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15590\tMIP\t\tGO:0005528\tGO_REF:0000012\tISA\tUniProtKB:F6X9I3_MOUSE\tF\tmacrophage infectivity potentiator, precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: F6X9I3_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:F6X9I3_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15650\tmt-SAF11\t\tGO:0006400\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00071\tP\tMitoribosomal SSU assembly factor 11\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00071", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15720\tRPN9\t\tGO:0004175\tPMID:11854272\tIGI\tUniProtKB:RPN9_YEAST\tF\tproteasome regulatory non-ATP-ase subunit 9\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RPN9_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RPN9_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15800\tTb927.10.15800\t\tGO:0007010\tGO_REF:0000024\tISS\tGeneDB:PF14_0124\tP\tactin related protein 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PF14_0124 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:PF14_0124", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16160\tTb927.10.16160\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0004016\tPMID:24879126\tIGI\tUniProtKB:CYAA_YEAST\tF\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20150604\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CYAA_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CYAA_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.170\tCBF5\t\tGO:0004730\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00431\tF\tpseudouridine synthase, Cbf5p\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00431", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.170\tCBF5\t\tGO:0006400\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00431\tP\tpseudouridine synthase, Cbf5p\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00431", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.200\tTb927.10.200\t\tGO:0008553\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tF\tvacuolar ATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01100", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.200\tTb927.10.200\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tP\tvacuolar ATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01100", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.200\tTb927.10.200\t\tGO:0016471\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tC\tvacuolar ATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01100", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2090\tEEF1A\t\tGO:0003746\tGO_REF:0000012\tISA\tUniProtKB:EF1A2_MOUSE\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: EF1A2_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:EF1A2_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2100\tEEF1A\t\tGO:0003746\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00485\tF\telongation factor 1-alpha\tTEF1\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00485", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2430\tTb927.10.2430\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2560\tmMDH\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01772\tP\tmitochondrial malate dehydrogenase\t\tmRNA\ttaxon:185431\t20090409\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01772", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2570\tTb927.10.2570\t\tGO:0005764\tPMID:9858640\tISA\tUniProtKB:AAD16005\tC\tlysosomal alpha-mannosidase precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAD16005 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAD16005", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2750\tDHSc\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:LdBPK_340350.1\tC\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20101116\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_340350.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_340350.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2750\tDHSc\t\tGO:0034038\tGO_REF:0000002\tISO\tGeneDB:LdBPK_340350.1\tF\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20091109\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_340350.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_340350.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2750\tDHSc\t\tGO:0043687\tGO_REF:0000002\tISO\tGeneDB:LdBPK_340350.1\tP\tdeoxyhypusine synthase\t\tmRNA\ttaxon:185431\t20091109\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_340350.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_340350.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.290\tTb927.10.290\t\tGO:0005839\tGO_REF:0000012\tISA\tUniProtKB:PSA2A_ARATH\tC\tproteasome alpha 2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PSA2A_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PSA2A_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2960\tGUF1\t\tGO:0005525\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01393\tF\tTranslation factor GUF1, mitochondrial, putative\tLepA\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01393", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0000375\tGO_REF:0000012\tISA\tUniProtKB:Q4CM27_TRYCC\tP\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q4CM27_TRYCC does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q4CM27_TRYCC", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0006397\tGO_REF:0000012\tISA\tUniProtKB:Q4CM27_TRYCC\tP\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q4CM27_TRYCC does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q4CM27_TRYCC", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3200\tU2AF35\t\tGO:0008380\tGO_REF:0000012\tISA\tUniProtKB:Q4CM27_TRYCC\tP\tU2 splicing auxiliary factor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q4CM27_TRYCC does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q4CM27_TRYCC", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.340\tTb927.10.340\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:Q9UA39_CRIFA\tC\tmitochondrial structure specific endonuclease I (SSE-1), putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9UA39_CRIFA does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9UA39_CRIFA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3520\tRPT4\t\tGO:0016887\tPMID:11854272\tIGI\tUniProtKB:PRS10_YEAST\tF\tprotease regulatory ATPase subunit 4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PRS10_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PRS10_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3560\tPRMT1-PRO\t\tGO:0035097\tGO_REF:0000012\tISA\tUniProtKB:CARM1_DROME\tC\tProtein arginine N-methyltransferase 1, prozyme\tPRMT3\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CARM1_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CARM1_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0008553\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00309\tF\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00309", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00309\tP\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00309", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0016471\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00309\tC\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00309", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4620\tPPIase\t\tGO:0005528\tGO_REF:0000012\tISA\tUniProtKB:FKB12_DROME\tF\tpeptidyl-prolyl cis-trans isomerase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FKB12_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FKB12_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4640\tEIF3L\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tF\teukaryotic translation initiation factor 3 subunit l\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: EIF3L_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:EIF3L_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4640\tEIF3L\t\tGO:0005852\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tC\teukaryotic translation initiation factor 3 subunit l\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: EIF3L_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:EIF3L_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4640\tEIF3L\t\tGO:0006413\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tP\teukaryotic translation initiation factor 3 subunit l\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: EIF3L_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:EIF3L_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5030\tTb927.10.5030\t\tGO:0020037\tGO_REF:0000024\tISS\tProsite:PS00190\tF\tubiquitin/ribosomal protein S27a, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00190 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00190", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5070\tRH2A\t\tGO:0004523\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00729\tF\tribonuclease H, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00729", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5070\tRH2A\t\tGO:0006401\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00729\tP\tribonuclease H, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00729", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5130\tTb927.10.5130\t\tGO:0005739\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tC\tProtein C21orf2 homolog, putative\t\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CU002_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CU002_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5130\tTb927.10.5130\t\tGO:0007010\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tP\tProtein C21orf2 homolog, putative\t\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CU002_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CU002_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5130\tTb927.10.5130\t\tGO:0008360\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tP\tProtein C21orf2 homolog, putative\t\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CU002_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CU002_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5130\tTb927.10.5130\t\tGO:0060271\tGO_REF:0000002\tISA\tUniProtKB:CU002_MOUSE\tP\tProtein C21orf2 homolog, putative\t\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CU002_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CU002_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5560\tGPI10\t\tGO:0006506\tPMID:10954751\tIGI\tUniProtKB:BAA94827\tP\tGPI alpha-mannosyltransferase III\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BAA94827 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BAA94827", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01018\tF\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01018", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5610\tTb927.10.5610\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01018\tP\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01018", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5670\tNAT1\t\tGO:0008080\tGO_REF:0000012\tISA\tUniProtKB:NAT1_YEAST\tF\tN-acetyltransferase subunit Nat1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NAT1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NAT1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0005634\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tC\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CDC48_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CDC48_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0016887\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tF\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CDC48_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CDC48_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0030970\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tP\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CDC48_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CDC48_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0051228\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tP\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CDC48_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CDC48_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5770\tVCP\t\tGO:0098554\tPMID:11279035\tIGI\tUniProtKB:CDC48_YEAST\tC\tTransitional endoplasmic reticulum ATPase, putative\tCDC48\tmRNA\ttaxon:185431\t20150414\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CDC48_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CDC48_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6370\tTb927.10.6370\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00280\tF\t60S ribosomal proteins L37, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00280", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6370\tTb927.10.6370\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00280\tP\t60S ribosomal proteins L37, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00280", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HSP60_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HSP60_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HSP60_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HSP60_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0034452\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0034464\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tC\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0043014\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6830\tBBS4\t\tGO:0048487\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6880\tGAP\t\tGO:0006096\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01534\tP\tglyceraldehyde 3-phosphate dehydrogenase, cytosolic\t\tmRNA\ttaxon:185431\t20090406\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01534", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.690\tTb927.10.690\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7140\tMBAP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmembrane-bound acid phosphatase 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7190\tTb927.10.7190\t\tGO:0004045\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00256\tF\tD-tyrosyl-tRNA deacylase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00256", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7430\tTb927.10.7430\t\tGO:0005525\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00650\tF\tGTP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00650", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0004742\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01349\tF\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01349", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0000278\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01241\tP\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01241", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:YME1_YEAST\tC\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YME1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YME1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0006508\tGO_REF:0000024\tISS\tGeneDB:PFL1925w\tP\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PFL1925w does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:PFL1925w", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7800\tTb927.10.7800\t\tGO:0007165\tGO_REF:0000012\tISA\tUniProtKB:CSN2_DROME\tP\tcop9 signalosome complex subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CSN2_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CSN2_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.790\tTb927.10.790\t\tGO:0005484\tGO_REF:0000012\tISA\tUniProtKB:Q7JYX5_DROME\tF\tvesicle-associated membrane protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q7JYX5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q7JYX5_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.790\tTb927.10.790\t\tGO:0016079\tGO_REF:0000012\tISA\tUniProtKB:Q7JYX5_DROME\tP\tvesicle-associated membrane protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q7JYX5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q7JYX5_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0005794\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0005802\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0005905\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0006886\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tP\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tP\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0030130\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8230\tPDI2\t\tGO:0003756\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01126\tF\tbloodstream- specific protein 2 precursor\tBS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01126", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8230\tPDI2\t\tGO:0005737\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01068\tC\tbloodstream- specific protein 2 precursor\tBS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01068", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8230\tPDI2\t\tGO:0006457\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01126\tP\tbloodstream- specific protein 2 precursor\tBS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01126", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9190\tIleRS\t\tGO:0004822\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00392\tF\tisoleucyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00392", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9190\tIleRS\t\tGO:0006428\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00392\tP\tisoleucyl-tRNA synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00392", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0005794\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0005802\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0005905\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0006886\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tP\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tP\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9230\tTb927.10.9230\t\tGO:0030130\tGO_REF:0000012\tISA\tUniProtKB:AP1B1_MOUSE\tC\tbeta adaptin, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AP1B1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AP1B1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:0004756\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00476\tF\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00476", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:0006418\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00476\tP\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00476", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9420\tTb927.10.9420\t\tGO:0008320\tGO_REF:0000012\tISA\tUniProtKB:BCS1_YEAST\tF\tmitochondrial chaperone BCS1, putative\t\tmRNA\ttaxon:185431\t20141125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BCS1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BCS1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9420\tTb927.10.9420\t\tGO:0032979\tGO_REF:0000012\tISA\tUniProtKB:BCS1_YEAST\tP\tmitochondrial chaperone BCS1, putative\t\tmRNA\ttaxon:185431\t20141125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BCS1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BCS1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9430\tPRS\t\tGO:0004749\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01251\tF\tphosphoribosylpyrophosphate synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01251", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9430\tPRS\t\tGO:0005524\tGO_REF:0000012\tISA\tUniProtKB:AAA29262.1\tF\tphosphoribosylpyrophosphate synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAA29262.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAA29262.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9430\tPRS\t\tGO:0009152\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01251\tP\tphosphoribosylpyrophosphate synthetase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01251", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9600\tTb927.10.9600\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tCMGC/DYRK protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9860\tTb927.10.9860\t\tGO:0006451\tGO_REF:0000002\tISA\tUniProtKB:MTQ1\tP\tMitochondrial N(5)-glutamine methyltransferase MTQ1, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MTQ1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MTQ1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9860\tTb927.10.9860\t\tGO:0008757\tGO_REF:0000002\tISA\tUniProtKB:MTQ1_YEAST\tF\tMitochondrial N(5)-glutamine methyltransferase MTQ1, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MTQ1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MTQ1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9900\tTb927.10.9900\t\tGO:0004672\tGO_REF:0000012\tISA\tUniProtKB:Q9VYI6_DROME\tF\tABC1 protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9VYI6_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9VYI6_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10060\tTb927.11.10060\t\tGO:0004077\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00121\tF\tBiotin--acetyl-CoA-carboxylase ligase, putative\tTb11.01.1820\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00121", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10060\tTb927.11.10060\t\tGO:0009102\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00121\tP\tBiotin--acetyl-CoA-carboxylase ligase, putative\tTb11.01.1820\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00121", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1010\tJ18\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb11.03.0110\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10110\tTb927.11.10110\t\tGO:0007010\tGO_REF:0000024\tISS\tGeneDB:PF14_0124\tP\tactin-like protein, putative\tTb11.01.1870\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PF14_0124 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:PF14_0124", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10340\tpgam5\t\tGO:0004721\tGO_REF:0000012\tISA\tUniProtKB:PGAM5_DROME\tF\tSerine/threonine-protein phosphatase PGAM5, mitochondrial, putative\tTb11.01.2110\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PGAM5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PGAM5_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10340\tpgam5\t\tGO:0010821\tGO_REF:0000012\tISA\tUniProtKB:PGAM5_DROME\tP\tSerine/threonine-protein phosphatase PGAM5, mitochondrial, putative\tTb11.01.2110\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PGAM5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PGAM5_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10340\tpgam5\t\tGO:0043539\tGO_REF:0000012\tISA\tUniProtKB:PGAM5_DROME\tF\tSerine/threonine-protein phosphatase PGAM5, mitochondrial, putative\tTb11.01.2110\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PGAM5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PGAM5_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10450\tTb927.11.10450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative\tTb11.01.2220\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1050\tTb927.11.1050\t\tGO:0006396\tGO_REF:0000024\tISS\tGeneDB:PF08_0055\tP\tribosome production factor 1, putative\tTb11.03.0050\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PF08_0055 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:PF08_0055", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10670\tTb927.11.10670\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:GO:0016787\tF\tglycosyl hydrolase, putative\tTb11.01.2440\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GO:0016787 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:GO:0016787", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10980\tTb927.11.10980\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGot1/Sft2-like family, putative\tTb11.01.2770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11290\tHSP70.1\t\tGO:0006457\tGO_REF:0000011\tISM\tProsite:PS00297|Pfam:PF00012|Prosite:PS00329\tP\theat shock protein 70, putative\tHSP70.c|Tb11.01.3080\tmRNA\ttaxon:185431\t20140702\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00297 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00297", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11290\tHSP70.1\t\tGO:0006457\tGO_REF:0000011\tISM\tProsite:PS00297|Pfam:PF00012|Prosite:PS00329\tP\theat shock protein 70, putative\tHSP70.c|Tb11.01.3080\tmRNA\ttaxon:185431\t20140702\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00329 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00329", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11330\tHSP70.4\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00012|Prosite:PS00297|Prosite:PS00329\tP\theat shock protein 70\tTb11.01.3110\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00297 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00297", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11330\tHSP70.4\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00012|Prosite:PS00297|Prosite:PS00329\tP\theat shock protein 70\tTb11.01.3110\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00329 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00329", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11440\tTb927.11.11440\t\tGO:0004844\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01084\tF\tA/G-specific adenine glycosylase, putative\tTb11.01.3270\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01084", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11440\tTb927.11.11440\t\tGO:0006281\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01084\tP\tA/G-specific adenine glycosylase, putative\tTb11.01.3270\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01084", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0008553\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01040\tF\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01040", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01040\tP\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01040", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11720\tTb927.11.11720\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFG-GAP repeat protein, putative\tTb11.01.3590\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11900\tCOPG\t\tGO:0006890\tGO_REF:0000012\tISA\tUniProtKB:COPG_DROME\tP\tCoatomer subunit gamma\tTb11.01.3740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: COPG_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:COPG_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0043626\tGO_REF:0000002\tISO\tGeneDB:LdBPK_090400.1\tC\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20111003\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_090400.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_090400.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12250\tMCM4\t\tGO:0044770\tGO_REF:0000002\tISO\tGeneDB:LdBPK_090400.1\tP\tDNA replication licensing factor MCM4\tTb11.01.4070\tmRNA\ttaxon:185431\t20111003\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_090400.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_090400.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12270\tTb927.11.12270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tdrug resistence protein, putative\tTb11.01.4090\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1260\tTb927.11.1260\t\tGO:0004008\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01511\tF\tcopper-transporting ATPase-like protein, putative\tTb11.47.0023\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01511", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1260\tTb927.11.1260\t\tGO:0005375\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01511\tF\tcopper-transporting ATPase-like protein, putative\tTb11.47.0023\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01511", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1260\tTb927.11.1260\t\tGO:0006825\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01511\tP\tcopper-transporting ATPase-like protein, putative\tTb11.47.0023\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01511", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1300\tTb927.11.1300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUBA/TS-N domain containing protein, putative\tTb11.47.0019\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13000\tTb927.11.13000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphospholipid-transporting ATPase, putative\tTb11.52.0018\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13130\tMBAP1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmembrane-bound acid phosphatase 1 precursor\tTb11.01.4701\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0005262\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tF\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MCU_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MCU_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0006851\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tP\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MCU_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MCU_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0015292\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tF\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MCU_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MCU_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0031305\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tC\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MCU_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MCU_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0051561\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tP\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MCU_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MCU_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:1990246\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tC\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MCU_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MCU_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13600\tJ60\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.01.5190\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0005634\tGO_REF:0000024\tISO\tUniProtKB:Q9U6M1|UniProtKB:TET1_MOUSE\tC\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TET1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TET1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0070580\tPMID:22514282|PMID:17389644|PMID:19136460|PMID:PMID:15694344\tIMP\t\tP\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20160126\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PMID:15694344 does not match any id_syntax patterns for PMID in dbxrefs", "obj": "PMID:PMID:15694344", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0004362\tGO_REF:0000012\tISA\tUniProtKB:CYB5_DROME\tF\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CYB5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CYB5_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0004016\tPMID:24879126\tIGI\tUniProtKB:CYAA_YEAST\tF\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20150609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CYAA_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CYAA_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13830\tJ63\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.01.5390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13960\tLSM4\t\tGO:0005634\tPMID:19429779\tIPI\tGeneDB:Tb927\tC\tU6 snRNA-associated Sm-like protein LSm4p\tTb11.01.5535\tmRNA\ttaxon:185431\t20160816\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13960\tLSM4\t\tGO:0030629\tGO_REF:0000012\tISA\tUniProtKB:LSM4_YEAST\tF\tU6 snRNA-associated Sm-like protein LSm4p\tTb11.01.5535\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LSM4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LSM4_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13980\tODA7\t\tGO:0044458\tGO_REF:0000002\tISO\tUniProtKB:DAAF1_CHLRE\tP\tComponent of motile flagella 65\tTb11.01.5550|CMF65\tmRNA\ttaxon:185431\t20150625\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DAAF1_CHLRE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DAAF1_CHLRE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.140\tTb927.11.140\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.03.0990\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140218\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14080\tCYC2\t\tGO:0016538\tPMID:10722661\tIGI\tUniProtKB:CG12_YEAST\tF\tcyclin 2\tTb11.01.5660\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CG12_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CG12_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14120\tTb927.11.14120\t\tGO:0005737\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00468\tC\tphenylalanyl-tRNA synthetase alpha chain, putative\tTb11.01.5710\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00468", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14280\tTb927.11.14280\t\tGO:0000917\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00172\tP\tseptum formation protein MAF homologue, putative\tTb11.01.5890\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00172", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14290\tTb927.11.14290\t\tGO:0016788\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00040\tF\tvacuolar sorting protein, putative\tTb11.01.5900\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00040", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14310\tSm-G\t\tGO:0045291\tGO_REF:0000012\tISA\tUniProtKB:RUXG_YEAST\tP\tsmall nuclear ribonucleoprotein Sm-G\tTb11.01.5915\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RUXG_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RUXG_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0004591\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tF\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00239", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00239", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0006554\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00239", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0045252\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00239", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1470\tTb927.11.1470\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t65 kDa invariant surface glycoprotein-like protein\tTb11.47.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14730\tFtsH14\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tMetalloprotease M41 FtsH, putative\tTb11.01.6360\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1480\tTb927.11.1480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.27.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14910\tTb927.11.14910\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein phosphatase 2C, putative\tTb11.01.6540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.150\tTb927.11.150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.03.0970\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HSP60_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HSP60_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HSP60_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HSP60_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15150\tTb927.11.15150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t1-acyl-sn-glycerol-3-phosphate acyltransferase, putative\tTb11.01.6800\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15170\ttsr3\t\tGO:0030490\tGO_REF:0000002\tISS\tUniProtKB:TSR3_YEAST\tP\tribosome biogenesis protein TSR3, putative\tTb11.01.6830\tmRNA\ttaxon:185431\t20140313\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TSR3_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TSR3_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15290\tMtq2\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:MTQ2_SCHPO\tC\teRF1 methyltransferase catalytic subunit, putative\tTb11.01.6940\tmRNA\ttaxon:185431\t20140606\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MTQ2_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MTQ2_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15290\tMtq2\t\tGO:0006417\tGO_REF:0000012\tISA\tUniProtKB:MTQ2_YEAST\tP\teRF1 methyltransferase catalytic subunit, putative\tTb11.01.6940\tmRNA\ttaxon:185431\t20140606\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MTQ2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MTQ2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15290\tMtq2\t\tGO:0008276\tGO_REF:0000012\tISA\tUniProtKB:HEMK2_HUMAN\tF\teRF1 methyltransferase catalytic subunit, putative\tTb11.01.6940\tmRNA\ttaxon:185431\t20140606\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HEMK2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HEMK2_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15330\tTb927.11.15330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphatidylinositol 3-kinase catalytic subunit, putative\tTb11.01.6980\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15530\tTb927.11.15530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tC-14 sterol reductase, putative\tTb11.01.7170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15730\tTb927.11.15730\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tTb11.01.7370\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15730\tTb927.11.15730\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tTb11.01.7370\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15730\tTb927.11.15730\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tTb11.01.7370\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15750\tTb927.11.15750\t\tGO:0006091\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01429\tP\tAMP deaminase, putative\tTb11.01.7390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01429", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15760\tTTA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGPI transamidase subunit Tta1\tTb11.01.7400\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15830\tTb927.11.15830\t\tGO:0030488\tGO_REF:0000002\tISA\tUniProtKB:TRM3_YEAST\tP\tRNA methyltransferase, putative\tTb11.01.7490\tmRNA\ttaxon:185431\t20130823\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TRM3_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TRM3_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15920\tTb927.11.15920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglutathione peroxidase, putative\tTb11.01.7560\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15950\tTb927.11.15950\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\tTb11.01.7590\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15960\tTb927.11.15960\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\tTb11.01.7600\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16030\tRPN7\t\tGO:0004175\tPMID:11854272\tIGI\tUniProtKB:RPN6_YEAST\tF\tproteasome regulatory non-ATP-ase subunit 7\tTb11.01.7690\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RPN6_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RPN6_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16110\tTb927.11.16110\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tintegrin alpha chain protein, putative\tTb11.01.7770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16240\tTb927.11.16240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\tTb11.01.7920\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16290\tATG4.1\t\tGO:0006914\tGO_REF:0000012\tISA\tUniProtKB:ATG4_YEAST\tP\tAUT2/APG4/ATG4 cysteine peptidase, putative\tTb11.01.7970\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ATG4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ATG4_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16310\tMYO13\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LdBPK_324020.1\tC\tUnconventional myosin\tTb11.01.7990\tmRNA\ttaxon:185431\t20150311\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_324020.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_324020.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16630\tTb927.11.16630\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmajor facilitator superfamily, putative\tTb11.01.8350\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16770\tTb927.11.16770\t\tGO:0004342\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00502\tF\tglucosamine-6-phosphate isomerase, putative\tTb11.01.8520\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00502", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16770\tTb927.11.16770\t\tGO:0006046\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00502\tP\tglucosamine-6-phosphate isomerase, putative\tTb11.01.8520\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00502", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0004016\tPMID:1545803|PMID:24879126\tIGI\tUniProtKB:CYAA_YEAST\tF\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20150608\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CYAA_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CYAA_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0006812\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01297\tP\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01297", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0008324\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01297\tF\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01297", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0015562\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01297\tF\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01297", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1990\tTb927.11.1990\t\tGO:0004814\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00456\tF\targinyl-tRNA synthetase, putative\tTb11.46.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00456", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1990\tTb927.11.1990\t\tGO:0005737\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00456\tC\targinyl-tRNA synthetase, putative\tTb11.46.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00456", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1990\tTb927.11.1990\t\tGO:0006420\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00456\tP\targinyl-tRNA synthetase, putative\tTb11.46.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00456", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.200\tRPB6z\t\tGO:0006351\tGO_REF:0000012\tISA\tUniProtKB:RPAB2_YEAST\tP\tDNA-directed RNA polymerase I subunit, putative\tTb11.03.0935|1RPB6\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RPAB2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RPAB2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20730\tTb927.11.20730\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tglycerophosphoryl diester phosphodiesterase, putative\tTb11.01.0580\tmRNA\ttaxon:185431\t20120524\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2130\tRPN3\t\tGO:0004175\tPMID:11854272\tIGI\tUniProtKB:RPN3_YEAST\tF\tproteasome regulatory non-ATP-ase subunit 3\tTb11.18.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RPN3_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RPN3_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2140\tTb927.11.2140\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tTb11.18.0012\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2140\tTb927.11.2140\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tTb11.18.0012\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2140\tTb927.11.2140\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tTb11.18.0012\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2210\tTb927.11.2210\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tdiacylglycerol acyltransferase, putative\tTb11.18.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2230\tCAT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcarnitine O-acetyltransferase, putative\tTb11.18.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2300\tERF1\t\tGO:0003747\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00108\tF\teukaryotic peptide chain release factor subunit 1, putative\tTb11.22.0012\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00108", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2330\tTb927.11.2330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmolybdopterin synthase sulphurylase protein, putative\tTb11.22.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2360\tTb927.11.2360\t\tGO:0004826\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00471\tF\tphenylalanyl-tRNA synthetase (beta subunit), putative\tTb11.22.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00471", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2360\tTb927.11.2360\t\tGO:0006432\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00471\tP\tphenylalanyl-tRNA synthetase (beta subunit), putative\tTb11.22.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00471", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2360\tTb927.11.2360\t\tGO:0009328\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00471\tC\tphenylalanyl-tRNA synthetase (beta subunit), putative\tTb11.22.0005\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00471", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2410\tTb927.11.2410\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LdBPK_271630.1\tC\tFlabarin, putative\tTb11.22.0001\tmRNA\ttaxon:185431\t20171122\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_271630.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_271630.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2730\tgalE\t\tGO:0006012\tPMID:11983889\tIGI\tUniProtKB:GALE_ECOLI\tP\tUDP-galactose 4-epimerase\tUDPGE|Tb11.02.0330\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GALE_ECOLI does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GALE_ECOLI", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0004749\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01251\tF\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01251", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0005524\tGO_REF:0000012\tISA\tUniProtKB:AAA29262.1\tF\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAA29262.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAA29262.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0009152\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01251\tP\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01251", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3070\tRRB1\t\tGO:0005730\tGO_REF:0000002\tISA\tUniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tC\tribosome assembly protein RRB1, putative\tTb11.02.0570\tmRNA\ttaxon:185431\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRB1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRB1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3070\tRRB1\t\tGO:0005730\tGO_REF:0000002\tISA\tUniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tC\tribosome assembly protein RRB1, putative\tTb11.02.0570\tmRNA\ttaxon:185431\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRB1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRB1_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3070\tRRB1\t\tGO:0042254\tGO_REF:0000002\tISA\tUniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tP\tribosome assembly protein RRB1, putative\tTb11.02.0570\tmRNA\ttaxon:185431\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRB1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRB1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3070\tRRB1\t\tGO:0042254\tGO_REF:0000002\tISA\tUniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tP\tribosome assembly protein RRB1, putative\tTb11.02.0570\tmRNA\ttaxon:185431\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRB1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRB1_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3090\tFOPNL\t\tGO:0031514\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_MOUSE\tC\tLisH domain-containing protein FOPNL, putative\tTb11.02.0590|FOR20\tmRNA\ttaxon:185431\t20140424\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FOPNL_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FOPNL_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3090\tFOPNL\t\tGO:0036064\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_MOUSE\tC\tLisH domain-containing protein FOPNL, putative\tTb11.02.0590|FOR20\tmRNA\ttaxon:185431\t20140424\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FOPNL_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FOPNL_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3090\tFOPNL\t\tGO:0060271\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_HUMAN\tP\tLisH domain-containing protein FOPNL, putative\tTb11.02.0590|FOR20\tmRNA\ttaxon:185431\t20140424\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FOPNL_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FOPNL_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3120\tNOG1\t\tGO:0005525\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00650\tF\tOligopeptidase B\tOPB3|Tb11.02.0620\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00650", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3130\tGAT2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglycosomal transporter (GAT2)\tTb11.02.0630\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3350\tTb927.11.3350\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphospholipid-transporting ATPase 1-like protein, putative\tTb11.02.0850\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3470\tTb927.11.3470\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tendosomal integral membrane protein, putative\tTb11.02.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3620\tNT8.2\t\tGO:0015851\tPMID:12946846\tIGI\tUniProtKB:FUN26_YEAST\tP\tnucleobase/nucleoside transporter 8.2\tTb11.02.1105|NBT2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FUN26_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FUN26_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3620\tNT8.2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tnucleobase/nucleoside transporter 8.2\tTb11.02.1105|NBT2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3630\tNT8.3\t\tGO:0015205\tGO_REF:0000012\tISA\tUniProtKB:AAM64205.1\tF\tnucleobase/nucleoside transporter 8.3\tTb11.02.1106|NBT3\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAM64205.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAM64205.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3630\tNT8.3\t\tGO:0015851\tGO_REF:0000012\tISA\tUniProtKB:AAM64205.1\tP\tnucleobase/nucleoside transporter 8.3\tTb11.02.1106|NBT3\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAM64205.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAM64205.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3630\tNT8.3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tnucleobase/nucleoside transporter 8.3\tTb11.02.1106|NBT3\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3660\tTb927.11.3660\t\tGO:0005875\tGO_REF:0000012\tISA\tUniProtKB:DYLT_DROME\tC\tdynein light chain Tctex-type, putative\tTb11.02.1135\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DYLT_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DYLT_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3730\tLeuRS\t\tGO:0004823\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00395\tF\tleucyl-tRNA synthetase, putative\tTb11.02.1210\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00395", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3730\tLeuRS\t\tGO:0006429\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00395\tP\tleucyl-tRNA synthetase, putative\tTb11.02.1210\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00395", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3740\tRPT2\t\tGO:0016887\tPMID:11854272\tIGI\tUniProtKB:PRS4_YEAST\tF\tproteasome regulatory ATPase subunit 2\tTb11.02.1220\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PRS4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PRS4_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3750\tB5R\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNADH-cytochrome b5 reductase, putative\tTb11.02.1230\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3780\tTb927.11.3780\t\tGO:0004252\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tF\tserine peptidase, clan SB, family S8-like protein\tTb11.02.1280\tmRNA\ttaxon:185431\t20101007\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_130940.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_130940.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3780\tTb927.11.3780\t\tGO:0030154\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tserine peptidase, clan SB, family S8-like protein\tTb11.02.1280\tmRNA\ttaxon:185431\t20141202\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_130940.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_130940.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3780\tTb927.11.3780\t\tGO:0045454\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tserine peptidase, clan SB, family S8-like protein\tTb11.02.1280\tmRNA\ttaxon:185431\t20141202\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_130940.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_130940.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3870\tTb927.11.3870\t\tGO:0008352\tGO_REF:0000012\tISA\tUniProtKB:Q9NHF1_DROME\tC\tkatanin, putative\tTb11.02.1370\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9NHF1_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9NHF1_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3880\tTRYPARP\t\tGO:0007010\tGO_REF:0000024\tISS\tGeneDB:PF14_0124\tP\tactin, putative\tTb11.02.1380\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PF14_0124 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:PF14_0124", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4200\tTb927.11.4200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmannose-specific lectin, putative\tTb11.02.1680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4220\tPAT6\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 6, putative\tTb11.02.1710\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.440\tTb927.11.440\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tconserved protein\tTb11.03.0700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4430\tFR1\t\tGO:0005886\tGO_REF:0000012\tISA\tGB:AEG66929\tC\tferric reductase transmembrane protein, putative\tTb11.02.1990\tmRNA\ttaxon:185431\t20141203\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GB not found in list of database names in dbxrefs", "obj": "GB:AEG66929", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4430\tFR1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tferric reductase transmembrane protein, putative\tTb11.02.1990\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4820\tTb927.11.4820\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01038\tF\t60S ribosomal protein L17, putative\tTb11.02.2430\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01038", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4820\tTb927.11.4820\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01038\tP\t60S ribosomal protein L17, putative\tTb11.02.2430\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01038", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4850\tTb927.11.4850\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.2460\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5140\tTb927.11.5140\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:GO:0004221\tC\tcysteine peptidase, Clan CA, family C12, putative\tTb11.02.2800\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GO:0004221 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:GO:0004221", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5140\tTb927.11.5140\t\tGO:0005838\tGO_REF:0000011\tISM\tInterPro:Q9XSJ0\tC\tcysteine peptidase, Clan CA, family C12, putative\tTb11.02.2800\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9XSJ0 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:Q9XSJ0", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5260\tTb927.11.5260\t\tGO:0006338\tGO_REF:0000012\tISA\tUniProtKB:AAF24984.1\tP\tSNF2 family protein\tTb11.02.2930\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAF24984.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAF24984.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5350\tHMIT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmyo-inositol/proton symporter (MIT)\tTb11.02.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5400\tSRP54\t\tGO:0003924\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01425\tF\tsignal recognition particle 54 kDa\tTb11.02.3070\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01425", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5490\tTb927.11.5490\t\tGO:0046488\tGO_REF:0000012\tISA\tUniProtKB:FIG4_MOUSE\tP\tPolyphosphoinositide phosphatase, putative\tTb11.02.3170\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FIG4_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FIG4_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0007018\tGO_REF:0000012\tISA\tUniProtKB:Q9V3Q0_DROME\tP\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9V3Q0_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9V3Q0_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5680\tLC1\t\tGO:0030286\tGO_REF:0000012\tISA\tUniProtKB:Q9V3Q0_DROME\tC\tdynein light chain 1, axonemal\tTb11.02.3390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9V3Q0_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9V3Q0_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.570\tTb927.11.570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.03.0510\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5710\tJ29\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb11.02.3430\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5940\tTb927.11.5940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.02.3740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6040\tTb927.11.6040\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNodulin-like, putative\tTb11.02.3860\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6160\tERF3\t\tGO:0003746\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00485\tF\teukaryotic release factor 3, putative\tTb11.02.4030\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00485", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6180\tTb927.11.6180\t\tGO:0003735\tGO_REF:0000011\tISM\tInterPro:PR002672\tF\t60S ribosomal protein L28, putative\tTb11.02.4050\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PR002672 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:PR002672", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0005784\tGO_REF:0000012\tISA\tUniProtKB:SC61A_YEAST\tC\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20141203\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SC61A_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SC61A_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0015450\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00967\tF\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00967", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6280\tPPDK\t\tGO:0050242\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01828\tF\tpyruvate phosphate dikinase\tTb11.02.4150\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01828", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6300\tTb927.11.6300\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01028\tF\t40S ribosomal protein S5, putative\tTb11.02.4170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01028", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6300\tTb927.11.6300\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01028\tP\t40S ribosomal protein S5, putative\tTb11.02.4170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01028", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0006098\tPMID:10867008\tISA\tUniProtKB:DEVB_ACTAC|UniProtKB:SOL1_YEAST\tP\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20090407\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DEVB_ACTAC does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DEVB_ACTAC", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0006098\tPMID:10867008\tISA\tUniProtKB:DEVB_ACTAC|UniProtKB:SOL1_YEAST\tP\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20090407\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SOL1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SOL1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6330\t6PGL\t\tGO:0006098\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01198\tP\t6-phosphogluconolactonase\tTb11.02.4200\tmRNA\ttaxon:185431\t20090407\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01198", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6570\tTb927.11.6570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNodulin-like, putative\tTb11.02.4420\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0004362\tGO_REF:0000012\tISA\tUniProtKB:Q9VJC0_DROME\tF\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9VJC0_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9VJC0_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6680\tTb927.11.6680\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid permease/transporter, putative\tTb11.02.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7000\tTb927.11.7000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.4850\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7100\tTb927.11.7100\t\tGO:0005829\tGO_REF:0000012\tISA\tUniProtKB:TMA20_YEAST\tC\tcytoplasmic translation machinery associated protein, putative\tTb11.02.4950\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TMA20_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TMA20_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7100\tTb927.11.7100\t\tGO:0005840\tGO_REF:0000012\tISA\tUniProtKB:TMA20_YEAST\tC\tcytoplasmic translation machinery associated protein, putative\tTb11.02.4950\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TMA20_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TMA20_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7100\tTb927.11.7100\t\tGO:0042254\tGO_REF:0000012\tISA\tUniProtKB:TMA20_YEAST\tP\tcytoplasmic translation machinery associated protein, putative\tTb11.02.4950\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TMA20_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TMA20_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7211\tTb927.11.7211\t\tGO:0006338\tGO_REF:0000002\tISS\tGB:AAF24984.1\tP\tSNF2 DNA repair protein, putative\tTb11.02.5060\tmRNA\ttaxon:185431\t20041001\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GB not found in list of database names in dbxrefs", "obj": "GB:AAF24984.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7300\tTb927.11.7300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmajor facilitator superfamily, putative\tTb11.02.5200\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7360\tTb927.11.7360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 9, putative\tTb11.02.5260\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.740\tEIF5A\t\tGO:0003743\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00037\tF\teukaryotic translation initiation factor 5A\tTb11.03.0410\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00037", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.740\tEIF5A\t\tGO:0006413\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00037\tP\teukaryotic translation initiation factor 5A\tTb11.03.0410\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00037", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0008553\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tF\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01100", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tP\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01100", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0016471\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tC\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01100", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7490\tTb927.11.7490\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.02.5480\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7500\tTb927.11.7500\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.02.5490\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7800\tTb927.11.7800\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.5680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8060\tTb927.11.8060\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSNARE associated Golgi protein, putative\tTb11.01.0480\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0000724\tGO_REF:0000002\tISA\tUniProtKB:RAD51_HUMAN\tP\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RAD51_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RAD51_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0008352\tGO_REF:0000012\tISA\tUniProtKB:Q9NHF1_DROME\tC\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9NHF1_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9NHF1_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8350\tKAT60A\t\tGO:0016197\tGO_REF:0000012\tISA\tUniProtKB:VPS4B_MOUSE\tP\tkatanin p60 ATPase containing subunit A, putative\tTb11.01.0200\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: VPS4B_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:VPS4B_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8380\tCPR\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNADPH--cytochrome P450 reductase, putative\tTb11.01.0170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8740\tTb927.11.8740\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.12.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0000462\tPMID:16687655\tISS\tUniProtKB:FAL1_YEAST\tP\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FAL1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FAL1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0005730\tPMID:16687655\tISS\tUniProtKB:FAL1_YEAST\tC\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FAL1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FAL1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8790\tTb927.11.8790\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttarget SNARE, putative\tTb11.12.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.880\tCYPA\t\tGO:0003755\tGO_REF:0000012\tISA\tUniProtKB:CYP3_CAEEL\tF\tcyclophilin type peptidyl-prolyl cis-trans isomerase\tTb11.03.0250\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CYP3_CAEEL does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CYP3_CAEEL", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8820\tTb927.11.8820\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglutathionylspermidine synthetase, putative\tTb11.12.0016\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9000\tTb927.11.9000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0725\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9010\tTb927.11.9010\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0730\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9020\tTb927.11.9020\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9030\tTb927.11.9030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9330\tTb927.11.9330\t\tGO:0006281\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00604\tP\thelicase-like protein\tTb11.01.1100\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00604", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0006744\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01474\tP\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01474", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9450\tPPIase\t\tGO:0003755\tGO_REF:0000012\tISA\tUniProtKB:CYP8_CAEEL\tF\tcyclophilin type peptidyl-prolyl cis-trans isomerase, putative\tTb11.01.1215\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CYP8_CAEEL does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CYP8_CAEEL", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9640\tTb927.11.9640\t\tGO:0004820\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00389\tF\tglycyl-tRNA synthetase, putative\tTb11.01.1400\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00389", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9640\tTb927.11.9640\t\tGO:0006426\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00389\tP\tglycyl-tRNA synthetase, putative\tTb11.01.1400\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00389", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9640\tTb927.11.9640\t\tGO:0009345\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00389\tC\tglycyl-tRNA synthetase, putative\tTb11.01.1400\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00389", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9670\tGCVT\t\tGO:0019464\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00528\tP\tglycine cleavage system T protein, putative\tTb11.01.1440\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00528", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9700\tTb927.11.9700\t\tGO:0003700\tGO_REF:0000012\tISA\tUniProtKB:Q7KM15_DROME\tF\ttranscription factor BTF3, putative\tTb11.01.1465\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q7KM15_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q7KM15_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9700\tTb927.11.9700\t\tGO:0005854\tGO_REF:0000012\tISA\tUniProtKB:Q7KM15_DROME\tC\ttranscription factor BTF3, putative\tTb11.01.1465\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q7KM15_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q7KM15_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0004591\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tF\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00239", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00239", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0006554\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00239", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0045252\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00239", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2130\tTb927.2.2130\t\tGO:0003924\tGO_REF:0000012\tISA\tUniProtKB:Q9V3I2_DROME\tF\tsmall GTP-binding protein RAB6, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9V3I2_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9V3I2_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2130\tTb927.2.2130\t\tGO:0005886\tGO_REF:0000012\tISA\tUniProtKB:Q9V3I2_DROME\tC\tsmall GTP-binding protein RAB6, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9V3I2_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9V3I2_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2130\tTb927.2.2130\t\tGO:0016191\tGO_REF:0000012\tISA\tUniProtKB:Q9V3I2_DROME\tP\tsmall GTP-binding protein RAB6, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9V3I2_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9V3I2_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2130\tTb927.2.2130\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:Q9V3I2_DROME\tP\tsmall GTP-binding protein RAB6, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9V3I2_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9V3I2_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2440\tRPN6\t\tGO:0004175\tGO_REF:0000012\tISA\tUniProtKB:PSD11_DROME\tF\tproteasome regulatory non-ATPase subunit 6\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PSD11_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PSD11_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2720\tFlaK\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE/STE7 protein kinase, putative\tMEKK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3080\tTb927.2.3080\t\tGO:0006633\tGO_REF:0000012\tISA\tUniProtKB:Q96VC2_MUCCI\tP\tfatty acid desaturase, putative\t10C8.340\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q96VC2_MUCCI does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q96VC2_MUCCI", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3370\tTb927.2.3370\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4060\tIC138\t\tGO:0030286\tGO_REF:0000012\tISA\tUniProtKB:DC1I1_MOUSE\tC\tWD repeat-containing protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DC1I1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DC1I1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4280\tTb927.2.4280\t\tGO:0008138\tGO_REF:0000012\tISA\tUniProtKB:MKP1_ARATH\tF\tkinetoplastid-specific dual specificity phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MKP1_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MKP1_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4330\tPFR5\t\tGO:0005198\tGO_REF:0000012\tISA\tUniProtKB:O81156_EUGGR\tF\tparaflagellar rod protein 5, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: O81156_EUGGR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:O81156_EUGGR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4330\tPFR5\t\tGO:0060285\tGO_REF:0000012\tISA\tUniProtKB:O81156_EUGGR\tP\tparaflagellar rod protein 5, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: O81156_EUGGR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:O81156_EUGGR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4590\tTb927.2.4590\t\tGO:0004084\tGO_REF:0000012\tISA\tUniProtKB:Q9VYD5_DROME\tF\tbranched-chain amino acid aminotransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9VYD5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9VYD5_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4610\tTb927.2.4610\t\tGO:0004084\tGO_REF:0000012\tISA\tUniProtKB:Q9VYD5_DROME\tF\tbranched-chain amino acid aminotransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9VYD5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9VYD5_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4720\tALG12\t\tGO:0005788\tGO_REF:0000012\tISA\tUniProtKB:12093361\tC\tdolichyl-P-Man:GDP-Man7GlcNAc2-PP-dolichyl alpha-1,6-mannosyltransferase, putative\t\tmRNA\ttaxon:185431\t20150929\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 12093361 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:12093361", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4720\tALG12\t\tGO:0006488\tGO_REF:0000012\tISA\tUniProtKB:ALG12_HUMAN\tP\tdolichyl-P-Man:GDP-Man7GlcNAc2-PP-dolichyl alpha-1,6-mannosyltransferase, putative\t\tmRNA\ttaxon:185431\t20150929\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ALG12_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ALG12_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4760\tTb927.2.4760\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4830\tTb927.2.4830\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4920\tTb927.2.4920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5290\tTb927.2.5290\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5300\tTb927.2.5300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5310\tTb927.2.5310\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5320\tTb927.2.5320\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5330\tTb927.2.5330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5340\tTb927.2.5340\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5350\tTb927.2.5350\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5360\tTb927.2.5360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5410\tTb927.2.5410\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:Q8YV35_NOSS1\tP\tABC transporter family-like protein\t1F7.75\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q8YV35_NOSS1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q8YV35_NOSS1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5410\tTb927.2.5410\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter family-like protein\t1F7.75\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5660\tADKA\t\tGO:0004017\tGO_REF:0000012\tISA\tUniProtKB:KAD_TRYBR\tF\tadenylate kinase, putative\t\tmRNA\ttaxon:185431\t20090602\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: KAD_TRYBR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:KAD_TRYBR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5750\tTb927.2.5750\t\tGO:0006281\tGO_REF:0000012\tISA\tUniProtKB:TYDP1_DROME\tP\ttyrosyl-DNA Phosphodiesterase (Tdp1), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TYDP1_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TYDP1_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5750\tTb927.2.5750\t\tGO:0017005\tGO_REF:0000012\tISA\tUniProtKB:TYDP1_DROME\tF\ttyrosyl-DNA Phosphodiesterase (Tdp1), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TYDP1_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TYDP1_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5910\tTb927.2.5910\t\tGO:0003735\tGO_REF:0000012\tISA\tUniProtKB:RS132_ARATH\tF\t40S ribosomal protein S13, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RS132_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RS132_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6050\tTb927.2.6050\t\tGO:0006890\tGO_REF:0000012\tISA\tUniProtKB:COPB2_DROME\tP\tbeta prime COP protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: COPB2_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:COPB2_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6050\tTb927.2.6050\t\tGO:0030126\tGO_REF:0000012\tISA\tUniProtKB:COPB2_DROME\tC\tbeta prime COP protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: COPB2_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:COPB2_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6130\tTb927.2.6130\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1570\tLBPK3\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tcalcium/calmodulin-dependent protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1610\tTb927.3.1610\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tCMGC/CLK family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0004672\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tF\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9U8F8_TRYCR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9U8F8_TRYCR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0005524\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tF\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9U8F8_TRYCR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9U8F8_TRYCR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tC\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9U8F8_TRYCR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9U8F8_TRYCR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tC\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9U8F8_TRYCR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9U8F8_TRYCR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0005856\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tC\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9U8F8_TRYCR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9U8F8_TRYCR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0006468\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tP\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9U8F8_TRYCR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9U8F8_TRYCR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tC\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9U8F8_TRYCR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9U8F8_TRYCR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2170\tTb927.3.2170\t\tGO:0003924\tGO_REF:0000012\tISA\tUniProtKB:ETUD1_HUMAN\tF\ttranslation elongation factor EF-2, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ETUD1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ETUD1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2170\tTb927.3.2170\t\tGO:0042256\tGO_REF:0000012\tISA\tUniProtKB:ETUD1_HUMAN\tP\ttranslation elongation factor EF-2, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ETUD1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ETUD1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2400\tTb927.3.2400\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 10, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2820\tTb927.3.2820\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3310\tTb927.3.3310\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:01294\tF\t60S ribosomal protein L13, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 01294 does not match any id_syntax patterns for Pfam in dbxrefs", "obj": "Pfam:01294", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3310\tTb927.3.3310\t\tGO:0005840\tGO_REF:0000011\tISM\tPfam:01294\tC\t60S ribosomal protein L13, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 01294 does not match any id_syntax patterns for Pfam in dbxrefs", "obj": "Pfam:01294", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3320\tTb927.3.3320\t\tGO:0003735\tGO_REF:0000011\tISM\tPfam:01294\tF\t60S ribosomal protein L13, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 01294 does not match any id_syntax patterns for Pfam in dbxrefs", "obj": "Pfam:01294", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3320\tTb927.3.3320\t\tGO:0005840\tGO_REF:0000011\tISM\tPfam:01294\tC\t60S ribosomal protein L13, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 01294 does not match any id_syntax patterns for Pfam in dbxrefs", "obj": "Pfam:01294", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3450\tARL3A\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tC\tADP-ribosylation factor-like protein 3, putative\t\tmRNA\ttaxon:185431\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3450\tARL3A\t\tGO:0008283\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3, putative\t\tmRNA\ttaxon:185431\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3450\tARL3A\t\tGO:0020018\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tC\tADP-ribosylation factor-like protein 3, putative\t\tmRNA\ttaxon:185431\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3450\tARL3A\t\tGO:0044782\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3, putative\t\tmRNA\ttaxon:185431\t20160921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3450\tARL3A\t\tGO:0046903\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3, putative\t\tmRNA\ttaxon:185431\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3450\tARL3A\t\tGO:0060170\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tC\tADP-ribosylation factor-like protein 3, putative\t\tmRNA\ttaxon:185431\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3610\tPEX7\t\tGO:0005053\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290770.1|GeneDB:LmjF.29.0740\tF\tperoxisomal targeting signal 2 receptor, putative\t\tmRNA\ttaxon:185431\t20141209\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3610\tPEX7\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290770.1|GeneDB:LmjF.29.0740\tC\tperoxisomal targeting signal 2 receptor, putative\t\tmRNA\ttaxon:185431\t20141209\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3610\tPEX7\t\tGO:0006625\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290770.1|GeneDB:LmjF.29.0740\tP\tperoxisomal targeting signal 2 receptor, putative\t\tmRNA\ttaxon:185431\t20141209\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3610\tPEX7\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290770.1|GeneDB:LmjF.29.0740\tC\tperoxisomal targeting signal 2 receptor, putative\t\tmRNA\ttaxon:185431\t20141209\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3670\tTRRM3\t\tGO:0003723\tPMID:16339728\tISS\tInterPro:IPR000504|UniProtKB:SGN1_YEAST\tF\tTriple RNA binding domain protein 3\t\tmRNA\ttaxon:185431\t20150602\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SGN1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SGN1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3730\tTb927.3.3730\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4220\tTb927.3.4220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tZn-finger domain protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4810\tsld5\t\tGO:0000727\tGO_REF:0000012\tISA\tUniProtKB:SLD5_YEAST\tP\tdna replication complex gins protein sld5\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SLD5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SLD5_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4810\tsld5\t\tGO:0006261\tGO_REF:0000012\tISA\tUniProtKB:SLD5_YEAST\tP\tdna replication complex gins protein sld5\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SLD5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SLD5_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5020\tFLAM6\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tFlagellar Member 6\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5020\tFLAM6\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tFlagellar Member 6\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5020\tFLAM6\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tFlagellar Member 6\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5320\tTb927.3.5320\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:UBX5_YEAST\tC\tUBX domain-containing protein\t\tmRNA\ttaxon:185431\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBX5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBX5_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5320\tTb927.3.5320\t\tGO:0005737\tGO_REF:0000002\tISA\tUniProtKB:UBX5_YEAST\tC\tUBX domain-containing protein\t\tmRNA\ttaxon:185431\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBX5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBX5_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5320\tTb927.3.5320\t\tGO:0031625\tGO_REF:0000002\tISA\tUniProtKB:UBXN7_HUMAN\tF\tUBX domain-containing protein\t\tmRNA\ttaxon:185431\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBXN7_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBXN7_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5320\tTb927.3.5320\t\tGO:0043130\tGO_REF:0000002\tISA\tUniProtKB:UBXN7_HUMAN\tF\tUBX domain-containing protein\t\tmRNA\ttaxon:185431\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBXN7_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBXN7_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5580\tTb927.3.5580\t\tGO:0006436\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00233\tP\ttryptophanyl-tRNA synthetase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00233", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5650\tTb927.3.5650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5660\tGnTI\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-GlcNAc:alpha3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I\tGT11\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.690\tTb927.3.690\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tCMGC/RCK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.710\tTb927.3.710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.780\tTbPSA7\t\tGO:0019773\tGO_REF:0000012\tISA\tUniProtKB:Q9NDA3_9TRYP\tC\tproteasome alpha 7 subunit\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9NDA3_9TRYP does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9NDA3_9TRYP", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1700\tTb927.4.1700\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tCK1/TTBK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1840\tTb927.4.1840\t\tGO:0004181\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\t\tmRNA\ttaxon:185431\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1840\tTb927.4.1840\t\tGO:0005524\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\t\tmRNA\ttaxon:185431\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1840\tTb927.4.1840\t\tGO:0005829\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tC\tmetallo-peptidase, Clan MC, Family M14\t\tmRNA\ttaxon:185431\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1840\tTb927.4.1840\t\tGO:0008270\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\t\tmRNA\ttaxon:185431\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1840\tTb927.4.1840\t\tGO:0043531\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\t\tmRNA\ttaxon:185431\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1920\tGPI16\t\tGO:0003923\tPMID:20382188\tISS\tUniProtKB:GPI16_YEAST\tF\tGPI transamidase subunit 16, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GPI16_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GPI16_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1920\tGPI16\t\tGO:0016255\tPMID:20382188\tISS\tUniProtKB:GPI16_YEAST\tP\tGPI transamidase subunit 16, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GPI16_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GPI16_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1920\tGPI16\t\tGO:0042765\tPMID:20382188\tISS\tUniProtKB:GPI16_YEAST\tC\tGPI transamidase subunit 16, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GPI16_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GPI16_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2350\tTWF\t\tGO:0000022\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tP\ttwinfilin\t\tmRNA\ttaxon:185431\t20160105\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_342060.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_342060.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2350\tTWF\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tC\ttwinfilin\t\tmRNA\ttaxon:185431\t20160105\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_342060.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_342060.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2350\tTWF\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tC\ttwinfilin\t\tmRNA\ttaxon:185431\t20160105\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_342060.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_342060.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2350\tTWF\t\tGO:0072686\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tC\ttwinfilin\t\tmRNA\ttaxon:185431\t20160105\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_342060.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_342060.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0015691\tGO_REF:0000012\tISA\tUniProtKB:YCFI_YEAST\tP\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YCFI_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YCFI_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0016021\tPMID:11152613|GO_REF:0000024\tISS\tUniProtKB:MRP1_MOUSE\tC\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MRP1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MRP1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2710\tTb927.4.2710\t\tGO:0004842\tGO_REF:0000002\tISA\tUniProtKB:UBC4_YEAST\tF\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20141211\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBC4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBC4_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3190\tTb927.4.3190\t\tGO:0004842\tGO_REF:0000002\tISS\tUniProtKB:UBC6_YEAST\tF\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBC6_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBC6_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3190\tTb927.4.3190\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3420\tWEE1\t\tGO:0045736\tGO_REF:0000002\tISS\tUniProtKB:WEE2_MOUSE\tP\twee1-like protein kinase\t\tmRNA\ttaxon:185431\t20131122\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: WEE2_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:WEE2_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3460\tTb927.4.3460\t\tGO:0004842\tGO_REF:0000002\tISS\tUniProtKB:UBC6_YEAST\tF\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBC6_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBC6_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3490\tRPB6\t\tGO:0006351\tGO_REF:0000012\tISA\tUniProtKB:RPAB2_YEAST\tP\tDNA-directed RNA polymerases II and III subunit RPB6, putative\t2RPB6\tmRNA\ttaxon:185431\t20110425\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RPAB2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RPAB2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3550\tTb927.4.3550\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01077\tF\t60S ribosomal protein L13a, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01077", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3550\tTb927.4.3550\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01077\tP\t60S ribosomal protein L13a, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01077", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3550\tTb927.4.3550\t\tGO:0015934\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01077\tC\t60S ribosomal protein L13a, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01077", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3750\tTb927.4.3750\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3860\tTb927.4.3860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3870\tTb927.4.3870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3880\tTb927.4.3880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3930\tTb927.4.3930\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4020\tAAT2-4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tOrnithine/histidine transporter AAT2-4\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4250\tTb927.4.4250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4270\tTb927.4.4270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4290\tTb927.4.4290\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4410\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4430\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4440\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4450\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4460\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4470\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4590\tTb927.4.4590\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tAGC family serine/threonine kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4680\tpsf3\t\tGO:0006260\tGO_REF:0000012\tISA\tUniProtKB:PSF3_SCHPO\tP\tDNA replication complex GINS protein PSF3\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PSF3_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PSF3_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4680\tpsf3\t\tGO:0071163\tGO_REF:0000012\tISA\tUniProtKB:PSF3_SCHPO\tP\tDNA replication complex GINS protein PSF3\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PSF3_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PSF3_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4740\tDHCS\t\tGO:0046513\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tP\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LAG1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LAG1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4740\tDHCS\t\tGO:0050291\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tF\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LAG1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LAG1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4740\tDHCS\t\tGO:0061576\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tC\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LAG1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LAG1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4830\tTb927.4.4830\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4850\tTb927.4.4850\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4870\tTb927.4.4870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4880\tTb927.4.4880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5180\tTLK1\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\ttousled-like kinase I\tLBPK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5240\tTb927.4.5240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5250\tTb927.4.5250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5260\tTb927.4.5260\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5270\tTb927.4.5270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5290\tTb927.4.5290\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.650\tJ19\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1450\tTb927.5.1450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1610\tTb927.5.1610\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01077\tF\t60S ribosomal protein L13a, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01077", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1610\tTb927.5.1610\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01077\tP\t60S ribosomal protein L13a, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01077", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1610\tTb927.5.1610\t\tGO:0015934\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01077\tC\t60S ribosomal protein L13a, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01077", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1650\tTb927.5.1650\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tCMGC/DYRK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2290\tU5-200K\t\tGO:0000398\tPMID:21537670\tIPI\tGeneDB:Tb10_snRNA_2:snRNA\tP\tU5 small nuclear ribonucleoprotein 200 kDa helicase, putative\tBRR2\tmRNA\ttaxon:185431\t20210323\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb10_snRNA_2:snRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb10_snRNA_2:snRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2290\tU5-200K\t\tGO:0030623\tPMID:21537670\tIPI\tGeneDB:Tb10_snRNA_2:snRNA\tF\tU5 small nuclear ribonucleoprotein 200 kDa helicase, putative\tBRR2\tmRNA\ttaxon:185431\t20210323\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb10_snRNA_2:snRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb10_snRNA_2:snRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2760\tTb927.5.2760\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2770\tSET15\t\tGO:0005737\tPMID:34407985PMID:34407985\tIDA\t\tC\tSET domain protein 15\t\tmRNA\ttaxon:185431\t20220204\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 34407985PMID:34407985 does not match any id_syntax patterns for PMID in dbxrefs", "obj": "PMID:34407985PMID:34407985", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.286b\tAT1\t\tGO:0005345\tPMID:14555482\tEXP\t\tF\tadenosine transporter 1\t\tmRNA\ttaxon:185431\t20090527\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.5.286b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb927.5.286b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.286b\tAT1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadenosine transporter 1\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.5.286b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb927.5.286b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.289b\tTb927.5.289b\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.5.289b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb927.5.289b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.291b\tESP5\t\tGO:0005768\tPMID:25931509\tIDA\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20150722\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.5.291b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb927.5.291b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.295b\tRHS1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tretrotransposon hotspot (RHS) protein 1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.5.295b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb927.5.295b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.309b\tTb927.5.309b\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tinvariant surface glycoprotein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.5.309b does not match any id_syntax patterns for TriTrypDB in dbxrefs", "obj": "TriTrypDB:Tb927.5.309b", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3120\tEIF2B\t\tGO:0001731\tGO_REF:0000012\tISA\tUniProtKB:IF2B_YEAST\tP\teukaryotic translation initiation factor 2 beta subunit, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IF2B_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:IF2B_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3120\tEIF2B\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:IF2B_YEAST\tF\teukaryotic translation initiation factor 2 beta subunit, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IF2B_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:IF2B_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3120\tEIF2B\t\tGO:0005850\tGO_REF:0000012\tISA\tUniProtKB:IF2B_YEAST\tC\teukaryotic translation initiation factor 2 beta subunit, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IF2B_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:IF2B_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3120\tEIF2B\t\tGO:0031369\tGO_REF:0000012\tISA\tUniProtKB:IF2B_YEAST\tF\teukaryotic translation initiation factor 2 beta subunit, putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IF2B_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:IF2B_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3150\tTb927.5.3150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein kinase , putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.320\tTb927.5.320\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb927.5.320b\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.330\tTb927.5.330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb927.5.330b\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3320\tTb927.5.3320\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPseudokinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3710\tISCL\t\tGO:0006685\tGO_REF:0000024\tISO\tGeneDB:LmjF08.0200genedb:LmjF08.0200\tP\tneutral sphingomyelinase\tISC1|NSMASE\tmRNA\ttaxon:185431\t20100120\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LmjF08.0200genedb:LmjF08.0200 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LmjF08.0200genedb:LmjF08.0200", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3810\tPYR6-5\t\tGO:0004588\tPMID:9878395\tISM\tJCVI_TIGRFAMS:TIGR00336\tF\torotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00336", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3810\tPYR6-5\t\tGO:0009220\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00336\tP\torotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00336", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3810\tPYR6-5\t\tGO:0020015\tGO_REF:0000012\tISA\tUniProtKB:O76139_TRYCR\tC\torotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: O76139_TRYCR does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:O76139_TRYCR", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3880\tTb927.5.3880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4030\tTbLSm7\t\tGO:0000398\tGO_REF:0000012\tISA\tUniProtKB:LSM7_YEAST\tP\tU6 snRNA-associated Sm-like protein LSm7p\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LSM7_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LSM7_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4030\tTbLSm7\t\tGO:0000956\tGO_REF:0000012\tISA\tUniProtKB:LSM7_YEAST\tP\tU6 snRNA-associated Sm-like protein LSm7p\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LSM7_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LSM7_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4030\tTbLSm7\t\tGO:0005688\tGO_REF:0000012\tISA\tUniProtKB:LSM7_YEAST\tC\tU6 snRNA-associated Sm-like protein LSm7p\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LSM7_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LSM7_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4030\tTbLSm7\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:LSM7_YEAST\tC\tU6 snRNA-associated Sm-like protein LSm7p\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LSM7_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LSM7_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4030\tTbLSm7\t\tGO:0030490\tGO_REF:0000012\tISA\tUniProtKB:LSM7_YEAST\tP\tU6 snRNA-associated Sm-like protein LSm7p\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LSM7_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LSM7_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4170\tTb927.5.4170\t\tGO:0000786\tGO_REF:0000012\tISA\tUniProtKB:H4_DROME\tC\thistone H4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: H4_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:H4_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4540\tTb927.5.4540\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4550\tTb927.5.4550\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.650\tTb927.5.650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.760\tCSBPII_45\t\tGO:0051219\tPMID:15470247\tISO\tUniProtKB:Q643Z2_CRIFA\tF\tCell cycle sequence binding phosphoprotein, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q643Z2_CRIFA does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q643Z2_CRIFA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.170\tTb927.6.170\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1820\tTb927.6.1820\t\tGO:0006487\tGO_REF:0000012\tISA\tUniProtKB:CAX4_YEAST\tP\tdolichyl pyrophosphate phosphatase, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CAX4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CAX4_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1820\tTb927.6.1820\t\tGO:0030176\tGO_REF:0000012\tISA\tUniProtKB:CAX4_YEAST\tC\tdolichyl pyrophosphate phosphatase, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CAX4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CAX4_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.190\tTb927.6.190\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1900\tenp1\t\tGO:0000462\tGO_REF:0000012\tISA\tUniProtKB:BYST_MOUSE\tP\tessential nuclear protein 1, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BYST_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BYST_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1900\tenp1\t\tGO:0006364\tGO_REF:0000012\tISA\tUniProtKB:ENP1_YEAST\tP\tessential nuclear protein 1, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ENP1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ENP1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1900\tenp1\t\tGO:0030515\tGO_REF:0000012\tISA\tUniProtKB:ENP1_YEAST\tF\tessential nuclear protein 1, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ENP1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ENP1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.200\tTb927.6.200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2030\tTb927.6.2030\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2450\tPKB\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tProtein kinase B, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2700\tSm-E\t\tGO:0045291\tGO_REF:0000012\tISA\tUniProtKB:RUXE_YEAST\tP\tsmall nuclear ribonucleoprotein Sm-E\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RUXE_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RUXE_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2710\tTb927.6.2710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tE3 ubiquitin-protein ligase HEL2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.280\tTb927.6.280\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2810\tTb927.6.2810\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2940\tPPCDC\t\tGO:0004633\tGO_REF:0000024\tISS\tUniProtKB:COAC_HUMAN\tF\tphosphopantothenoylcysteine decarboxylase, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: COAC_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:COAC_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2940\tPPCDC\t\tGO:0015937\tGO_REF:0000024\tISS\tUniProtKB:COAC_HUMAN\tP\tphosphopantothenoylcysteine decarboxylase, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: COAC_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:COAC_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.300\tTb927.6.300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.310\tTb927.6.310\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.330\tTb927.6.330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3500\tJ59\t\tGO:0006897\tGO_REF:0000012\tISA\tUniProtKB:AAK54248.1\tP\tendosomal trafficking protein RME-8, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAK54248.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAK54248.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3690\tCFIIm\t\tGO:0000214\tGO_REF:0000012\tISO\tUniProtKB:CLP1_HUMAN\tC\tpre-mRNA cleavage complex II Clp1-like, conserved\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CLP1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CLP1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3690\tCFIIm\t\tGO:0006388\tGO_REF:0000012\tISO\tUniProtKB:CLP1_HUMAN\tP\tpre-mRNA cleavage complex II Clp1-like, conserved\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CLP1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CLP1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3690\tCFIIm\t\tGO:0030423\tGO_REF:0000012\tISO\tUniProtKB:CLP1_HUMAN\tP\tpre-mRNA cleavage complex II Clp1-like, conserved\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CLP1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CLP1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3690\tCFIIm\t\tGO:0051736\tGO_REF:0000012\tISO\tUniProtKB:CLP1_HUMAN\tF\tpre-mRNA cleavage complex II Clp1-like, conserved\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CLP1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CLP1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.370\tTb927.6.370\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3730\tJ38\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3780\tTb927.6.3780\t\tGO:0004842\tGO_REF:0000012\tISA\tUniProtKB:ARI2_HUMAN\tF\tE3 ubiquitin-protein ligase, putative\t\tmRNA\ttaxon:185431\t20130812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ARI2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ARI2_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3780\tTb927.6.3780\t\tGO:0070936\tGO_REF:0000012\tISA\tUniProtKB:ARI2_HUMAN\tP\tE3 ubiquitin-protein ligase, putative\t\tmRNA\ttaxon:185431\t20150217\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ARI2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ARI2_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.380\tTb927.6.380\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4280\tGAPDH\t\tGO:0004365\tPMID:2040304\tISO\tUniProtKB:G3P1_YEAST\tF\tglyceraldehyde 3-phosphate dehydrogenase, glycosomal\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: G3P1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:G3P1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4280\tGAPDH\t\tGO:0006096\tPMID:2040304\tISO\tUniProtKB:G3P1_YEAST\tP\tglyceraldehyde 3-phosphate dehydrogenase, glycosomal\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: G3P1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:G3P1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.430\tTb927.6.430\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4300\tGAPDH\t\tGO:0004365\tPMID:2040304\tISO\tUniProtKB:G3P1_YEAST\tF\tglyceraldehyde 3-phosphate dehydrogenase, glycosomal\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: G3P1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:G3P1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4300\tGAPDH\t\tGO:0006096\tPMID:2040304\tISO\tUniProtKB:G3P1_YEAST\tP\tglyceraldehyde 3-phosphate dehydrogenase, glycosomal\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: G3P1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:G3P1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4340\tSm15K\t\tGO:0030629\tGO_REF:0000012\tISA\tUniProtKB:LSM5_YEAST\tF\tsmall nuclear ribonucleoprotein, putative\tSSm2-1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LSM5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LSM5_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.450\tTb927.6.450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tEP3-2 procyclin\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.460\tPAG3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin associated gene 3 (PAG3) protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.480\tTb927.6.480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tEP3-2 procyclin\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.490\tPAG3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin associated gene 3 (PAG3) protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.510\tGPEET\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin A-alpha\tparpA-alpha\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.520\tEP3-2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tsurface protein EP3-3 procyclin precursor\tparpA-beta\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.530\tPAG3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin associated gene 3 (PAG3) protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.760\tTb927.6.760\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.770\tTb927.6.770\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.780\tTb927.6.780\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.790\tTb927.6.790\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.800\tTb927.6.800\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.850\tNOT2\t\tGO:0000122\tPMID:18442996\tISO\tUniProtKB:CNOT2_HUMAN\tP\tccr4-not transcription complex subunit 2\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CNOT2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CNOT2_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.850\tNOT2\t\tGO:0001104\tPMID:18442996\tISO\tUniProtKB:CNOT2_HUMAN\tF\tccr4-not transcription complex subunit 2\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CNOT2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CNOT2_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.940\tMCA2\t\tGO:0008233\tGO_REF:0000012\tISA\tUniProtKB:MCA1_SCHPO\tF\tmetacaspase MCA2\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MCA1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MCA1_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1720\tNFU1\t\tGO:0016226\tGO_REF:0000012\tISA\tUniProtKB:NFU1_HUMAN\tP\tHIRA-interacting protein 5, putative\tHIRIP5\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NFU1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NFU1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1780\tTb927.7.1780\t\tGO:0006166\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01090\tP\tAdenine phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01090", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1790\tTb927.7.1790\t\tGO:0003999\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01090\tF\tAdenine phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01090", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1790\tTb927.7.1790\t\tGO:0006166\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01090\tP\tAdenine phosphoribosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01090", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.190\tTHOP1\t\tGO:0035556\tGO_REF:0000002\tISA\tUniProtKB:THOP1_MOUSE\tP\tthimet oligopeptidase, putative\tPRD1\tmRNA\ttaxon:185431\t20130823\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: THOP1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:THOP1_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1910\tGCVP\t\tGO:0004375\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00461\tF\tpyridoxal phosphate containing glycine decarboxylase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00461", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1910\tGCVP\t\tGO:0019464\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00461\tP\tpyridoxal phosphate containing glycine decarboxylase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00461", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2070\tTb927.7.2070\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:002939\tP\theat shock protein DNAJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 002939 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:002939", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.220\tCDS\t\tGO:0004605\tPMID:24533860\tIGI\tUniProtKB:CDS1_YEAST\tF\tCDP-DAG synthase\t\tmRNA\ttaxon:185431\t20140805\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CDS1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CDS1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.220\tCDS\t\tGO:0016024\tPMID:24533860\tIGI\tUniProtKB:CDS1_YEAST\tP\tCDP-DAG synthase\t\tmRNA\ttaxon:185431\t20140805\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CDS1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CDS1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2230\tTb927.7.2230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2320\tTb927.7.2320\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2320\tTb927.7.2320\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2320\tTb927.7.2320\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2480\tPAR42\t\tGO:0003755\tGO_REF:0000002\tISO\tUniProtKB:PIN1_HUMAN\tF\tParvulin 42\t\tmRNA\ttaxon:185431\t20140606\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PIN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PIN1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3360\tFPPS\t\tGO:0004161\tGO_REF:0000002\tISS\tUniProtKB:FPPS_YEAST\tF\tfarnesyl pyrophosphate synthase\t\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FPPS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FPPS_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3360\tFPPS\t\tGO:0004337\tGO_REF:0000002\tISS\tUniProtKB:FPPS_YEAST\tF\tfarnesyl pyrophosphate synthase\t\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FPPS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FPPS_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3360\tFPPS\t\tGO:0045337\tGO_REF:0000002\tISS\tUniProtKB:FPPS_YEAST\tP\tfarnesyl pyrophosphate synthase\t\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FPPS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FPPS_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3490\tSYJ2\t\tGO:0004445\tGO_REF:0000012\tISA\tUniProtKB:SYJ1_SCHPO\tF\tsynaptojanin, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYJ1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYJ1_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3580\tNEK11\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tSerine/threonine-protein kinase NEK11, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3620\tTyrRS\t\tGO:0004831\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00234\tF\ttyrosyl-tRNA synthetase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00234", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3620\tTyrRS\t\tGO:0006437\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00234\tP\ttyrosyl-tRNA synthetase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00234", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3950\tKRET1\t\tGO:0000166\tPMID:11893335\tISS\tProsite:PS00522\tF\tRNA-editing 3' terminal uridylyl transferase 1\tTUTase|RET1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00522 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00522", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3950\tKRET1\t\tGO:0004652\tPMID:11893335\tISS\tProsite:PS00522\tF\tRNA-editing 3' terminal uridylyl transferase 1\tTUTase|RET1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00522 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00522", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4090\tTb927.7.4090\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tCMGC/DYRK protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4390\tTb927.7.4390\t\tGO:0004795\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00260\tF\tthreonine synthase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00260", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4390\tTb927.7.4390\t\tGO:0009088\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00260\tP\tthreonine synthase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00260", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4900\tXRNA\t\tGO:0004534\tGO_REF:0000024\tISS\tUniProtKB:XRN1_YEAST\tF\t5'-3' exoribonuclease A\tXRN1|KEM\tmRNA\ttaxon:185431\t20150318\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: XRN1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:XRN1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4970\tGS\t\tGO:0005737\tGO_REF:0000002\tISA\tUniProtKB:GLNA_MOUSE\tC\tglutamine synthetase, putative\tTb07.27E10.120\tmRNA\ttaxon:185431\t20130823\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GLNA_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GLNA_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4970\tGS\t\tGO:0005739\tGO_REF:0000002\tISA\tUniProtKB:GLNA_MOUSE\tC\tglutamine synthetase, putative\tTb07.27E10.120\tmRNA\ttaxon:185431\t20130823\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GLNA_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GLNA_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5220\tTb927.7.5220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tForkhead Kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5230\tTb927.7.5230\t\tGO:0000250\tPMID:11071292\tIGI\tUniProtKB:ERG7_YEAST\tF\tlanosterol synthase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ERG7_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ERG7_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5230\tTb927.7.5230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tlanosterol synthase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6040\tTb927.7.6040\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6050\tTb927.7.6050\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6060\tTb927.7.6060\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6070\tTb927.7.6070\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6080\tTb927.7.6080\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6200\tJ26\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6660\tJ10\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.740\tJ28\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7470\tACP3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7520\tTb927.7.7520\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7530\tTb927.7.7530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1030\tTb927.8.1030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1110\tTb927.8.1110\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01018\tF\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01018", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1110\tTb927.8.1110\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01018\tP\t40S ribosomal protein S9, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01018", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1160\tTb927.8.1160\t\tGO:0005388\tGO_REF:0000012\tISA\tUniProtKB:AAL55433.1\tF\tvacuolar-type Ca2+-ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAL55433.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAL55433.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1160\tTb927.8.1160\t\tGO:0006874\tGO_REF:0000012\tISA\tUniProtKB:AAL55433.1\tP\tvacuolar-type Ca2+-ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAL55433.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAL55433.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1160\tTb927.8.1160\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tvacuolar-type Ca2+-ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1160\tTb927.8.1160\t\tGO:0016049\tGO_REF:0000012\tISA\tUniProtKB:AAL55433.1\tP\tvacuolar-type Ca2+-ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAL55433.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAL55433.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1160\tTb927.8.1160\t\tGO:0020022\tGO_REF:0000012\tISA\tUniProtKB:AAL55433.1\tC\tvacuolar-type Ca2+-ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAL55433.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAL55433.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1180\tTbA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tvacuolar-type Ca2+-ATPase 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1310\tMCP15\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1650\tTb927.8.1650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein Associated with Differentiation, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1670\tNEK14\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tSerine/threonine-protein kinase NEK14, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1690\tNEK14\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tSerine/threonine-protein kinase NEK14, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1810\tTb927.8.1810\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\trhomboid-like protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1940\tTb927.8.1940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tendosomal integral membrane protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.200\tTb927.8.200\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase (pseudogene), putative\t\tpseudogenic_transcript\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2100\tTb927.8.2100\t\tGO:0008553\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tF\tvacuolar ATP synthase 16 kDa proteolipid subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01100", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2100\tTb927.8.2100\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tP\tvacuolar ATP synthase 16 kDa proteolipid subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01100", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2100\tTb927.8.2100\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tvacuolar ATP synthase 16 kDa proteolipid subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2100\tTb927.8.2100\t\tGO:0016471\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tC\tvacuolar ATP synthase 16 kDa proteolipid subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01100", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2130\tTb927.8.2130\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2130\tTb927.8.2130\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2130\tTb927.8.2130\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2200\tTb927.8.2200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tterbinafine resistance locus protein (yip1), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2200\tTb927.8.2200\t\tGO:0042493\tGO_REF:0000012\tISA\tUniProtKB:AAO73006.1\tP\tterbinafine resistance locus protein (yip1), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAO73006.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAO73006.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2380\tABCG5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2480\tTb927.8.2480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t3-oxo-5-alpha-steroid 4-dehydrogenase-like, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2520\tACS\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tacetyl-CoA synthetase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2610\tTb927.8.2610\t\tGO:0003871\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01371\tF\t5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01371", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2610\tTb927.8.2610\t\tGO:0009086\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01371\tP\t5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01371", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3240\tTb927.8.3240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tlathosterol oxidase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3330\tMCP18\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3400\tTb927.8.3400\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 12, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3620\tFT1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tfolate transporter 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3630\tFT2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tfolate transporter 2\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3650\tFT3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFolate transporter 3\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3690\tIDH\t\tGO:0004450\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00127\tF\tisocitrate dehydrogenase [NADP], mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00127", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3690\tIDH\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00127\tP\tisocitrate dehydrogenase [NADP], mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00127", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3750\tNOP56\t\tGO:0006364\tGO_REF:0000002\tISS\tUniProtKB:NOP56_YEAST\tP\tnucleolar protein 56\t\tmRNA\ttaxon:185431\t20140220\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NOP56_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NOP56_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3750\tNOP56\t\tGO:0031428\tGO_REF:0000002\tISS\tUniProtKB:NOP56_YEAST\tC\tnucleolar protein 56\t\tmRNA\ttaxon:185431\t20140220\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NOP56_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NOP56_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3750\tNOP56\t\tGO:0032040\tGO_REF:0000002\tISS\tUniProtKB:NOP56_YEAST\tC\tnucleolar protein 56\t\tmRNA\ttaxon:185431\t20140220\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NOP56_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NOP56_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3880\tTb927.8.3880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3890\tTb927.8.3890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3900\tTb927.8.3900\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4010\tFLA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFlagellum adhesion protein 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4050\tFLA1BP-2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFLA1-binding protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4060\tFLA2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFlagellum adhesion protein 2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4100\tFLA1BP-1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFLA1-binding protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4110\tFLA3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFlagellum adhesion protein 3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4260\tTb927.8.4260\t\tGO:0004674\tGO_REF:0000002\tISM\tInterPro:IPR008271|PANTHER:PTHR23257|Prosite:PS00108\tF\tserine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20131125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00108 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00108", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4260\tTb927.8.4260\t\tGO:0005524\tGO_REF:0000002\tISM\tProsite:PS00107|InterPro:IPR000719\tF\tserine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20131125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00107 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00107", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4260\tTb927.8.4260\t\tGO:0006468\tGO_REF:0000002\tISM\tInterPro:IPR008266|PANTHER:PTHR23257|Prosite:PS00108\tP\tserine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20131125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00108 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00108", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4330\tRAB11\t\tGO:0016191\tGO_REF:0000012\tISA\tUniProtKB:Q3UZ37_MOUSE\tP\tsmall GTP-binding protein Rab11\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q3UZ37_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q3UZ37_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4330\tRAB11\t\tGO:0016192\tGO_REF:0000012\tISA\tUniProtKB:Q3UZ37_MOUSE\tP\tsmall GTP-binding protein Rab11\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q3UZ37_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q3UZ37_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4440\tMCP19\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4540\tPBP1\t\tGO:0010494\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tC\tPAB1-binding protein , putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PBP1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PBP1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4540\tPBP1\t\tGO:0034063\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tP\tPAB1-binding protein , putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PBP1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PBP1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4540\tPBP1\t\tGO:0045727\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tP\tPAB1-binding protein , putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PBP1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PBP1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4600\tTb927.8.4600\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tZinc finger, C3HC4 type (RING finger), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4700\tAATP6\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.480\tTb927.8.480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphatidic acid phosphatase protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4890\tTb927.8.4890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpol-associated gene 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5030\tTb927.8.5030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttrafficking protein particle complex subunit 3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5420\tTb927.8.5420\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmethyltransferase domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0002036\tPMID:22994895\tISO\tGeneDB:LdBPK_100770.1\tP\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0005886\tPMID:22994895\tISO\tGeneDB:LdBPK_100770.1\tC\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0006971\tPMID:22994895\tISO\tGeneDB:LdBPK_100770.1\tP\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0015193\tPMID:22994895\tISO\tGeneDB:LdBPK_100770.1\tF\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0015193\tPMID:22994895\tIGI\tUniProtKB:PUT4_YEAST\tF\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PUT4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PUT4_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0022858\tPMID:22994895\tISO\tGeneDB:LdBPK_100770.1\tF\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0035524\tPMID:22994895\tISO\tGeneDB:LdBPK_100770.1\tP\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0051955\tPMID:22994895\tISO\tGeneDB:LdBPK_100770.1\tP\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0070881\tPMID:22994895\tISO\tGeneDB:LdBPK_100770.1\tP\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0080144\tPMID:22994895\tISO\tGeneDB:LdBPK_100770.1\tP\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.550\tTb927.8.550\t\tGO:0008113\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00401\tF\tpeptide methionine sulfoxide reductase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00401", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5500\tTb927.8.5500\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tcalcium/calmodulin-dependent protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5530\tTb927.8.5530\t\tGO:0008180\tGO_REF:0000002\tISA\tUniProtKB:CSN5B_ARATH\tC\tCOP9 signalosome complex subunit 5, putative\t\tmRNA\ttaxon:185431\t20130903\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CSN5B_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CSN5B_ARATH", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5570\tTb927.8.5570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttransporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.560\tTb927.8.560\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5600\tTb927.8.5600\t\tGO:0004801\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00874\tF\ttransaldolase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00874", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5600\tTb927.8.5600\t\tGO:0006098\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00874\tP\ttransaldolase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00874", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5630\tPYR3\t\tGO:0019856\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00857\tP\tdihydroorotase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00857", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5810\tMCP24\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5980\tTb927.8.5980\t\tGO:0006281\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00604\tP\tTFIIH basal transcription factor complex helicase subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00604", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6000\tTb927.8.6000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tfatty acid desaturase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6060\tAKCT\t\tGO:0006567\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01822\tP\t2-amino-3-ketobutyrate coenzyme A ligase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01822", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6110\tHMGS\t\tGO:0004421\tGO_REF:0000012\tISA\tUniProtKB:HMCS_YEAST\tF\t3-hydroxy-3-methylglutaryl-CoA synthase, putative\t\tmRNA\ttaxon:185431\t20140808\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HMCS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HMCS_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6110\tHMGS\t\tGO:0006696\tGO_REF:0000012\tISA\tUniProtKB:HMCS_YEAST\tP\t3-hydroxy-3-methylglutaryl-CoA synthase, putative\t\tmRNA\ttaxon:185431\t20140808\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HMCS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HMCS_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6170\tTK\t\tGO:0005737\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00232\tC\ttransketolase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00232", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6180\tTb927.8.6180\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01080\tF\t60S ribosomal protein L26, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01080", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6180\tTb927.8.6180\t\tGO:0006412\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01080\tP\t60S ribosomal protein L26, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01080", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6410\tKAR3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tshort-chain dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.650\tTb927.8.650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation-transporting ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6500\tCDC20\t\tGO:0000278\tGO_REF:0000024\tISO\tGeneDB:LdBPK_241790.1\tP\tcell division cycle protein 20, putative\t\tmRNA\ttaxon:185431\t20150312\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_241790.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_241790.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6500\tCDC20\t\tGO:0051726\tGO_REF:0000024\tISO\tGeneDB:LdBPK_241790.1\tP\tcell division cycle protein 20, putative\t\tmRNA\ttaxon:185431\t20150312\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_241790.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_241790.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6580\tSDH1\t\tGO:0000104\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01812\tF\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01812", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6580\tSDH1\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01812\tP\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01812", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6620\tTb927.8.6620\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6840\tMLH1\t\tGO:0016887\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00585\tF\tmismatch repair protein MLH1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00585", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7140\tTb927.8.7140\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7150\tTb927.8.7150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7260\tTb927.8.7260\t\tGO:0020023\tGO_REF:0000012\tISA\tUniProtKB:AAA30209\tC\tkinetoplast-associated protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAA30209 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAA30209", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.740\tNOPP44/46-3\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:AAC47134.1\tF\tnucleolar RNA-binding protein (fragment)\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAC47134.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAC47134.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.740\tNOPP44/46-3\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:AAC47134.1\tC\tnucleolar RNA-binding protein (fragment)\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAC47134.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAC47134.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7410\tTb927.8.7410\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:AAD22175.1\tP\tcalreticulin, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAD22175.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAD22175.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7410\tTb927.8.7410\t\tGO:0015926\tGO_REF:0000012\tISA\tUniProtKB:AAD22175.1\tF\tcalreticulin, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAD22175.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAD22175.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7410\tTb927.8.7410\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcalreticulin, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7410\tTb927.8.7410\t\tGO:0016757\tGO_REF:0000012\tISA\tUniProtKB:AAD22175.1\tF\tcalreticulin, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAD22175.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAD22175.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7410\tTb927.8.7410\t\tGO:0030246\tGO_REF:0000012\tISA\tUniProtKB:AAD22175.1\tF\tcalreticulin, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAD22175.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAD22175.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7460\tTb927.8.7460\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmetal-ion transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7460\tTb927.8.7460\t\tGO:0046873\tGO_REF:0000012\tISA\tUniProtKB:Q9V471_DROME\tF\tmetal-ion transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9V471_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9V471_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.750\tNOPP44/46-2\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:AAC47134.1\tF\tnucleolar RNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAC47134.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAC47134.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.750\tNOPP44/46-2\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:AAC47134.1\tC\tnucleolar RNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAC47134.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAC47134.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.750\tNOPP44/46-2\t\tGO:0016070\tGO_REF:0000012\tISA\tUniProtKB:AAC47134.1\tP\tnucleolar RNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: AAC47134.1 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:AAC47134.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7560\tTb927.8.7560\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tCorA-like Mg2+ transporter protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7580\tTb927.8.7580\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7590\tTb927.8.7590\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.760:mRNA\tNOPP44/46-1\t\tGO:0003676\tPMID:9701560\tIDA\t\tF\tnucleolar RNA-binding protein\tNOPP44/46\tmRNA\ttaxon:185431\t20100104\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.760:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.760:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.760:mRNA\tNOPP44/46-1\t\tGO:0004712\tPMID:8183324\tIDA\t\tF\tnucleolar RNA-binding protein\tNOPP44/46\tmRNA\ttaxon:185431\t20100104\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.760:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.760:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.760:mRNA\tNOPP44/46-1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tnucleolar RNA-binding protein\tNOPP44/46\tmRNA\ttaxon:185431\t20170912\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.760:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.760:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.760:mRNA\tNOPP44/46-1\t\tGO:0016070\tPMID:8663171\tTAS\t\tP\tnucleolar RNA-binding protein\tNOPP44/46\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.760:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.760:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7610:mRNA\tAATP1\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7610:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7610:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7610:mRNA\tAATP1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7610:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7610:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7610:mRNA\tAATP1\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7610:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7610:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7610:mRNA\tAATP1\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR002422\tC\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7610:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7610:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7610:mRNA\tAATP1\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7610:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7610:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7620:mRNA\tAATP1\t\tGO:0005275\tGO_REF:0000011\tISM\t\tF\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7620:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7620:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7620:mRNA\tAATP1\t\tGO:0006865\tGO_REF:0000011\tISM\t\tP\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7620:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7620:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7620:mRNA\tAATP1\t\tGO:0016020\tGO_REF:0000011\tISM\t\tC\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7620:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7620:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7630:mRNA\tAATP1\t\tGO:0005275\tGO_REF:0000011\tISM\t\tF\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7630:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7630:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7630:mRNA\tAATP1\t\tGO:0006865\tGO_REF:0000011\tISM\t\tP\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7630:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7630:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7630:mRNA\tAATP1\t\tGO:0016020\tGO_REF:0000011\tISM\t\tC\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7630:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7630:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7640:mRNA\tAATP1\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7640:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7640:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7640:mRNA\tAATP1\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7640:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7640:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7640:mRNA\tAATP1\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7640:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7640:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7650:mRNA\tTb927.8.7650\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7650:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7650:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7650:mRNA\tTb927.8.7650\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7650:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7650:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7650:mRNA\tTb927.8.7650\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR002422\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7650:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7650:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7670:mRNA\tTb927.8.7670\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7670:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7670:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7670:mRNA\tTb927.8.7670\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7670:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7670:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7670:mRNA\tTb927.8.7670\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR002422\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7670:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7670:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7680:mRNA\tTb927.8.7680\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7680:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7680:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7680:mRNA\tTb927.8.7680\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7680:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7680:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7680:mRNA\tTb927.8.7680\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7680:mRNA\tTb927.8.7680\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7680:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7680:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7700:mRNA\tTb927.8.7700\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7700:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7700:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7700:mRNA\tTb927.8.7700\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7700:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7700:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7700:mRNA\tTb927.8.7700\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7700:mRNA\tTb927.8.7700\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7700:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7700:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.770:mRNA\tTb927.8.770\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.770:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.770:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.770:mRNA\tTb927.8.770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.770:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.770:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7710:mRNA\tTb927.8.7710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7710:mRNA\tTb927.8.7710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7710:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7710:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7720:mRNA\tTb927.8.7720\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7720:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7720:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7720:mRNA\tTb927.8.7720\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7720:mRNA\tTb927.8.7720\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7720:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7720:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7720:mRNA\tTb927.8.7720\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7720:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7720:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7720:mRNA\tTb927.8.7720\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7720:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7720:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0005515\tPMID:26272611\tIPI\tGeneDB:Tb927.7.6310\tF\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20160713\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7730:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7730:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7730:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7730:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7730:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7730:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7730:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7730:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0046513\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tP\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LAG1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LAG1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0046513\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tP\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7730:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7730:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0050291\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tF\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LAG1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LAG1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0050291\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tF\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7730:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7730:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0061576\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tC\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LAG1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LAG1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0061576\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tC\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7730:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7730:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7730:mRNA\tDHCS\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tSphingosine N-acyltransferase, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7730:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7730:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7740:mRNA\tTb927.8.7740\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7740:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7740:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7740:mRNA\tTb927.8.7740\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7740:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7740:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7760:mRNA\tTb927.8.7760\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7760:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7760:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7760:mRNA\tTb927.8.7760\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7760:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7760:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7770:mRNA\tTb927.8.7770\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\taldehyde dehydrogenase family, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7770:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7770:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7770:mRNA\tTb927.8.7770\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\taldehyde dehydrogenase family, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7770:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7770:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7820:mRNA\tTb927.8.7820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\t'Cold-shock' DNA-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7820:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7820:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7820:mRNA\tTb927.8.7820\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\t'Cold-shock' DNA-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7820:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7820:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7820:mRNA\tTb927.8.7820\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\t'Cold-shock' DNA-binding domain containing protein, putative\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7820:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7820:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7830:mRNA\tTb927.8.7830\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7830:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7830:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7840:mRNA\tTb927.8.7840\t\tGO:0000132\tGO_REF:0000012\tISA\tUniProtKB:P36022\tP\tdynein heavy chain, cytosolic, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7840:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7840:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7840:mRNA\tTb927.8.7840\t\tGO:0005881\tGO_REF:0000012\tISA\tUniProtKB:P36022\tC\tdynein heavy chain, cytosolic, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7840:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7840:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7860:mRNA\tTb927.8.7860\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7860:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7860:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7860:mRNA\tTb927.8.7860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7860:mRNA\tTb927.8.7860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7860:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7860:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7860:mRNA\tTb927.8.7860\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7860:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7860:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7870:mRNA\tTb927.8.7870\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7870:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7870:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7870:mRNA\tTb927.8.7870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7870:mRNA\tTb927.8.7870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7870:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7870:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7870:mRNA\tTb927.8.7870\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7870:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7870:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7890:mRNA\tTb927.8.7890\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7890:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7890:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7890:mRNA\tTb927.8.7890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7890:mRNA\tTb927.8.7890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7890:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7890:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7890:mRNA\tTb927.8.7890\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7890:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7890:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7900:mRNA\tTb927.8.7900\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7900:mRNA\tTb927.8.7900\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7900:mRNA\tTb927.8.7900\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7900:mRNA\tTb927.8.7900\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7920:mRNA\tTb927.8.7920\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7920:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7920:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7920:mRNA\tTb927.8.7920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7920:mRNA\tTb927.8.7920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7920:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7920:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7920:mRNA\tTb927.8.7920\t\tGO:0097542\tPMID:33104188\tIDA\t\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20220225\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7920:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7920:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7930:mRNA\tTb927.8.7930\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7930:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7930:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7930:mRNA\tTb927.8.7930\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7930:mRNA\tTb927.8.7930\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7930:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7930:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7930:mRNA\tTb927.8.7930\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7930:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7930:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7940:mRNA\tTb927.8.7940\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7940:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7940:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7940:mRNA\tTb927.8.7940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7940:mRNA\tTb927.8.7940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7940:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7940:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7940:mRNA\tTb927.8.7940\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7940:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7940:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7960:mRNA\tTb927.8.7960\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7960:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7960:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0000139\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511385.30\tC\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20120418\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7980:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7980:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511385.30\tC\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20120418\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7980:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7980:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0006874\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4380\tP\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20150323\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7980:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7980:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0009678\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01104\tF\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01104", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0009678\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01104\tF\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7980:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7980:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0015992\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01104\tP\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01104", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0015992\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01104\tP\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7980:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7980:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7980:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7980:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4380|GeneDB:TcCLB.511385.30\tC\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20150323\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7980:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7980:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0051452\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4380\tP\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20150323\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.7980:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.7980:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8000:mRNA\tTb927.8.8000\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8000:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8000:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8000:mRNA\tTb927.8.8000\t\tGO:0005929\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8000:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8000:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8000:mRNA\tTb927.8.8000\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8000:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8000:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8010:mRNA\tTb927.8.8010\t\tGO:0036064\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8010:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8010:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8020:mRNA\tTb927.8.8020\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmonoglyceride lipase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8020:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8020:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8020:mRNA\tTb927.8.8020\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tmonoglyceride lipase, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8020:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8020:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8020:mRNA\tTb927.8.8020\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:IPR003089\tF\tmonoglyceride lipase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8020:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8020:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8030:mRNA\tTb927.8.8030\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\temp24/gp25L/p24 family/GOLD, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8030:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8030:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8030:mRNA\tTb927.8.8030\t\tGO:0005794\tGO_REF:0000109\tIDA\t\tC\temp24/gp25L/p24 family/GOLD, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8030:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8030:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8040:mRNA\tALPH3\t\tGO:0004722\tGO_REF:0000011\tISM\tPfam:PF00149\tF\tApaH-like phosphatase ALPH3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8040:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8040:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8040:mRNA\tALPH3\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tApaH-like phosphatase ALPH3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8040:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8040:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8040:mRNA\tALPH3\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:IPR004843\tF\tApaH-like phosphatase ALPH3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8040:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8040:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8050:mRNA\tNUP75\t\tGO:0005643\tPMID:26891179\tIPI\tGeneDB:Tb927.4.4310\tC\tNucleoporin NUP75\t\tmRNA\ttaxon:185431\t20170217\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8050:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8050:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8050:mRNA\tNUP75\t\tGO:0005643\tPMID:19525551\tIDA\t\tC\tNucleoporin NUP75\t\tmRNA\ttaxon:185431\t20090619\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8050:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8050:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8050:mRNA\tNUP75\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\tNucleoporin NUP75\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8050:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8050:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8090:mRNA\tTb927.8.8090\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8090:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8090:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8090:mRNA\tTb927.8.8090\t\tGO:0006506\tPMID:2525555\tTAS\t\tP\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8090:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8090:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8090:mRNA\tTb927.8.8090\t\tGO:0008194\tPMID:2525555\tTAS\t\tF\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8090:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8090:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8090:mRNA\tTb927.8.8090\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8090:mRNA\tTb927.8.8090\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8090:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8090:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8100:mRNA\tTb927.8.8100\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8100:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8100:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8100:mRNA\tTb927.8.8100\t\tGO:0006506\tPMID:2525555\tTAS\t\tP\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8100:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8100:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8100:mRNA\tTb927.8.8100\t\tGO:0008194\tPMID:2525555\tTAS\t\tF\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8100:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8100:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8100:mRNA\tTb927.8.8100\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8100:mRNA\tTb927.8.8100\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8100:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8100:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.810:mRNA\tTb927.8.810\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tradial spoke protein RSP9, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.810:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.810:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8120:mRNA\tTb927.8.8120\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8120:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8120:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8120:mRNA\tTb927.8.8120\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8120:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8120:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8140:mRNA\tTb927.8.8140\t\tGO:0005525\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tsmall GTP-binding rab protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8140:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8140:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8140:mRNA\tTb927.8.8140\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tsmall GTP-binding rab protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8140:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8140:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8140:mRNA\tTb927.8.8140\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tsmall GTP-binding rab protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8140:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8140:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8140:mRNA\tTb927.8.8140\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tsmall GTP-binding rab protein, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8140:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8140:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8160:mRNA\tTb927.8.8160\t\tGO:0120260\tPMID:32518185\tIDA\t\tC\tSUMO-interacting motif-containing protein\t\tmRNA\ttaxon:185431\t20210115\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8160:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8160:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8170:mRNA\tREMC5A\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10830\tP\tmitochondrial RNA binding protein 1, putative\tMRB8170\tmRNA\ttaxon:185431\t20160921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8170:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8170:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8170:mRNA\tREMC5A\t\tGO:0003723\tGO_REF:0000002\tIDA\t\tF\tmitochondrial RNA binding protein 1, putative\tMRB8170\tmRNA\ttaxon:185431\t20120905\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8170:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8170:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8170:mRNA\tREMC5A\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding protein 1, putative\tMRB8170\tmRNA\ttaxon:185431\t20140522\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8170:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8170:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8170:mRNA\tREMC5A\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding protein 1, putative\tMRB8170\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8170:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8170:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8170:mRNA\tREMC5A\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmitochondrial RNA binding protein 1, putative\tMRB8170\tmRNA\ttaxon:185431\t20160712\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8170:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8170:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8170:mRNA\tREMC5A\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10830\tC\tmitochondrial RNA binding protein 1, putative\tMRB8170\tmRNA\ttaxon:185431\t20160921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8170:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8170:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8170:mRNA\tREMC5A\t\tGO:0032774\tGO_REF:0000002\tIDA\t\tP\tmitochondrial RNA binding protein 1, putative\tMRB8170\tmRNA\ttaxon:185431\t20120905\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8170:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8170:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8180:mRNA\tREMC4\t\tGO:0000963\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10830\tP\tmitochondrial RNA binding complex 1 subunit\tMRB8180\tmRNA\ttaxon:185431\t20160921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8180:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8180:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8180:mRNA\tREMC4\t\tGO:0003723\tPMID:22396527\tIDA\t\tF\tmitochondrial RNA binding complex 1 subunit\tMRB8180\tmRNA\ttaxon:185431\t20120910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8180:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8180:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8180:mRNA\tREMC4\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB8180\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8180:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8180:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8180:mRNA\tREMC4\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB8180\tmRNA\ttaxon:185431\t20140522\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8180:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8180:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8180:mRNA\tREMC4\t\tGO:0016554\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tMRB8180\tmRNA\ttaxon:185431\t20120910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8180:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8180:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8180:mRNA\tREMC4\t\tGO:0031019\tPMID:22396527\tIPI\tGeneDB:Tb927.10.10830\tC\tmitochondrial RNA binding complex 1 subunit\tMRB8180\tmRNA\ttaxon:185431\t20160921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8180:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8180:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8180:mRNA\tREMC4\t\tGO:0031019\tPMID:26991453\tRCA\t\tC\tmitochondrial RNA binding complex 1 subunit\tMRB8180\tmRNA\ttaxon:185431\t20160712\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8180:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8180:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8180:mRNA\tREMC4\t\tGO:0048255\tPMID:22396527\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tMRB8180\tmRNA\ttaxon:185431\t20120910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8180:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8180:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8190:mRNA\tTb927.8.8190\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8190:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8190:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8190:mRNA\tTb927.8.8190\t\tGO:0005739\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8190:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8190:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8200:mRNA\tTb927.8.8200\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tFlagellar-associated protein 59, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8200:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8200:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8200:mRNA\tTb927.8.8200\t\tGO:0005930\tGO_REF:0000109\tIDA\t\tC\tFlagellar-associated protein 59, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8200:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8200:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.820:mRNA\tTb927.8.820\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tVID27 cytoplasmic protein, putative\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.820:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.820:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.820:mRNA\tTb927.8.820\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tVID27 cytoplasmic protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.820:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.820:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.820:mRNA\tTb927.8.820\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tVID27 cytoplasmic protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.820:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.820:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.820:mRNA\tTb927.8.820\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tVID27 cytoplasmic protein, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.820:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.820:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8210:mRNA\tCSTF64\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tCleavage stimulating factor 64, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8210:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8210:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8210:mRNA\tCSTF64\t\tGO:0005847\tPMID:26727667\tIPI\tGeneDB:Tb927.11.14560\tC\tCleavage stimulating factor 64, putative\t\tmRNA\ttaxon:185431\t20161129\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8210:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8210:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8220:mRNA\tTb927.8.8220\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8220:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8220:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8220:mRNA\tTb927.8.8220\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8220:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8220:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8220:mRNA\tTb927.8.8220\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8220:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8220:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8220:mRNA\tTb927.8.8220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8220:mRNA\tTb927.8.8220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8220:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8220:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8230:mRNA\tTb927.8.8230\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8230:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8230:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8230:mRNA\tTb927.8.8230\t\tGO:0005635\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8230:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8230:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8230:mRNA\tTb927.8.8230\t\tGO:0005783\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20180307\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8230:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8230:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8230:mRNA\tTb927.8.8230\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8230:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8230:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8230:mRNA\tTb927.8.8230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8230:mRNA\tTb927.8.8230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8230:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8230:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8240:mRNA\tTb927.8.8240\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8240:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8240:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8240:mRNA\tTb927.8.8240\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8240:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8240:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8240:mRNA\tTb927.8.8240\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8240:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8240:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8240:mRNA\tTb927.8.8240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8240:mRNA\tTb927.8.8240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8240:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8240:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8250:mRNA\tTb927.8.8250\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8250:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8250:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8250:mRNA\tTb927.8.8250\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8250:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8250:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8250:mRNA\tTb927.8.8250\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8250:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8250:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8250:mRNA\tTb927.8.8250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8250:mRNA\tTb927.8.8250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8250:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8250:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8260:mRNA\tTb927.8.8260\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8260:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8260:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8260:mRNA\tTb927.8.8260\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8260:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8260:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8260:mRNA\tTb927.8.8260\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8260:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8260:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8260:mRNA\tTb927.8.8260\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8260:mRNA\tTb927.8.8260\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8260:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8260:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8260:mRNA\tTb927.8.8260\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8260:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8260:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8260:mRNA\tTb927.8.8260\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20180308\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8260:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8260:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8290:mRNA\tAAT10-1\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tOrnithine transporter AAT10-1\tAATP5\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8290:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8290:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8290:mRNA\tAAT10-1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tOrnithine transporter AAT10-1\tAATP5\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8290:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8290:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8290:mRNA\tAAT10-1\t\tGO:0097627\tPMID:28679527\tIDA\t\tF\tOrnithine transporter AAT10-1\tAATP5\tmRNA\ttaxon:185431\t20210115\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8290:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8290:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8300:mRNA\tTb927.8.8300\t\tGO:0005275\tGO_REF:0000011\tISM\tInterPro:IPR002422\tF\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8300:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8300:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8300:mRNA\tTb927.8.8300\t\tGO:0005886\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8300:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8300:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8300:mRNA\tTb927.8.8300\t\tGO:0006865\tGO_REF:0000011\tISM\tInterPro:IPR002422\tP\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8300:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8300:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8300:mRNA\tTb927.8.8300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8300:mRNA\tTb927.8.8300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8300:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8300:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8300:mRNA\tTb927.8.8300\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20160814\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8300:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8300:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8310:mRNA\tJ70\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8310:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8310:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8310:mRNA\tJ70\t\tGO:0006457\tGO_REF:0000011\tISM\tPfam:PF00226\tP\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8310:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8310:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8330:mRNA\tCAP5.5V\t\tGO:0000226\tPMID:19656721\tIMP\t\tP\tcysteine peptidase, putative\t\tmRNA\ttaxon:185431\t20200310\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8330:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8330:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8330:mRNA\tCAP5.5V\t\tGO:0000902\tPMID:19656721\tIMP\t\tP\tcysteine peptidase, putative\t\tmRNA\ttaxon:185431\t20200310\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8330:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8330:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8330:mRNA\tCAP5.5V\t\tGO:0004198\tGO_REF:0000011\tISM\tInterPro:IPR001300\tF\tcysteine peptidase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8330:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8330:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8330:mRNA\tCAP5.5V\t\tGO:0005622\tGO_REF:0000011\tISM\tInterPro:IPR001300\tC\tcysteine peptidase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8330:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8330:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8330:mRNA\tCAP5.5V\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tcysteine peptidase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8330:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8330:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8330:mRNA\tCAP5.5V\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001300\tP\tcysteine peptidase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8330:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8330:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8340:mRNA\tTb927.8.8340\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCRAL/TRIO domain containing protein, putative\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8340:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8340:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8350:mRNA\tKIN13-4b\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tKinesin-13 4b, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8350:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8350:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8350:mRNA\tKIN13-4b\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tKinesin-13 4b, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8350:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8350:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8350:mRNA\tKIN13-4b\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tKinesin-13 4b, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8350:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8350:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8350:mRNA\tKIN13-4b\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tKinesin-13 4b, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8350:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8350:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8360:mRNA\tTb927.8.8360\t\tGO:0004016\tGO_REF:0000011\tISM\tInterPro:IPR001054\tF\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8360:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8360:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8360:mRNA\tTb927.8.8360\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140522\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8360:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8360:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8360:mRNA\tTb927.8.8360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8360:mRNA\tTb927.8.8360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8360:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8360:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8360:mRNA\tTb927.8.8360\t\tGO:0035556\tGO_REF:0000011\tISM\tPfam:PF00211\tP\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.8360:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.8360:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.840:mRNA\tTb927.8.840\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.840:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.840:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.840:mRNA\tTb927.8.840\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.840:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.840:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.860:mRNA\tTb927.8.860\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.860:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.860:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.870:mRNA\tTb927.8.870\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.870:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.870:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.870:mRNA\tTb927.8.870\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.870:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.870:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.870:mRNA\tTb927.8.870\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.870:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.870:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.870:mRNA\tTb927.8.870\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.870:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.870:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.870:mRNA\tTb927.8.870\t\tGO:0031981\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.870:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.870:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.870:mRNA\tTb927.8.870\t\tGO:0097014\tGO_REF:0000109\tIDA\t\tC\tCAMK/CAMKL family protein kinase, putative\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.870:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.870:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.890:mRNA\tRab1A\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tRas-related protein Rab1A\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.890:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.890:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.890:mRNA\tRab1A\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tRas-related protein Rab1A\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.890:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.890:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.890:mRNA\tRab1A\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\tRas-related protein Rab1A\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.890:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.890:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.890:mRNA\tRab1A\t\tGO:0020016\tGO_REF:0000109\tIDA\t\tC\tRas-related protein Rab1A\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.890:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.890:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0000365\tPMID:24922194\tIMP\t\tP\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20190104\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0003723\tPMID:10477180\tIDA\t\tF\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0003729\tPMID:26784394\tIDA\t\tF\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20160607\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20170912\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0005634\tPMID:10477180\tIDA\t\tC\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0005654\tGO_REF:0000109\tIDA\t\tC\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20170801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0006364\tPMID:24922194\tIMP\t\tP\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20190104\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0016607\tPMID:24922194\tIDA\t\tC\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20190104\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.900:mRNA\tTSR1\t\tGO:0045292\tPMID:24922194\tIMP\t\tP\tsplicing factor TSR1\t\tmRNA\ttaxon:185431\t20190104\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.900:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.900:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.910:mRNA\tTb927.8.910\t\tGO:0005730\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.910:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.910:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.910:mRNA\tTb927.8.910\t\tGO:0005737\tGO_REF:0000109\tIDA\t\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20180305\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.910:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.910:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.910:mRNA\tTb927.8.910\t\tGO:0010608\tPMID:24945722\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.910:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.910:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.910:mRNA\tTb927.8.910\t\tGO:0010608\tPMID:26784394\tIDA\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20160712\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.910:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.910:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.920:mRNA\tPEX4\t\tGO:0004842\tGO_REF:0000002\tISS\t\tF\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.8.920:mRNA does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.8.920:mRNA", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10010\tJ34\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb09.211.1550\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10230\tP23\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LdBPK_354540.1\tC\tCo-chaperone protein P23\tTb09.211.1690|ACDP23A\tmRNA\ttaxon:185431\t20160801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_354540.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_354540.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10250\tSm-F\t\tGO:0045291\tGO_REF:0000012\tISA\tUniProtKB:RUXF_YEAST\tP\tsmall nuclear ribonucleoprotein Sm-F\tTb09.211.1695\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RUXF_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RUXF_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10640\tTb927.9.10640\t\tGO:0004438\tGO_REF:0000012\tISA\tUniProtKB:SAC1_YEAST\tF\tsynaptojanin (N-terminal domain), putative\tTb09.211.2020\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SAC1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SAC1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10670\tBBS1\t\tGO:0034464\tGO_REF:0000012\tISA\tUniProtKB:BBS1_HUMAN\tC\tbardet-biedl syndrome 1 protein\tTb09.211.2080\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11840\tPNO1\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:PNO1_HUMAN\tF\tpre-rRNA-processing protein PNO1, putative\tTb09.211.2960\tmRNA\ttaxon:185431\t20170823\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PNO1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PNO1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11840\tPNO1\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:PNO1_HUMAN\tC\tpre-rRNA-processing protein PNO1, putative\tTb09.211.2960\tmRNA\ttaxon:185431\t20140731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PNO1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PNO1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12400\tTb927.9.12400\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE/STE11 serine/threonine-protein kinase, putative\tTb09.211.3410\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12790\tTb927.9.12790\t\tGO:0004168\tGO_REF:0000012\tISA\tUniProtKB:DOLK_HUMAN\tF\tdolichol kinase, putative\tTb09.211.3740\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DOLK_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DOLK_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12790\tTb927.9.12790\t\tGO:0030176\tGO_REF:0000012\tISA\tUniProtKB:DOLK_HUMAN\tC\tdolichol kinase, putative\tTb09.211.3740\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DOLK_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DOLK_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12790\tTb927.9.12790\t\tGO:0043048\tGO_REF:0000012\tISA\tUniProtKB:DOLK_HUMAN\tP\tdolichol kinase, putative\tTb09.211.3740\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DOLK_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DOLK_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12820\tTb927.9.12820\t\tGO:0007018\tGO_REF:0000012\tISA\tUniProtKB:Q7KUM9_DROME\tP\tdynein light chain, putative\tTb09.211.3770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q7KUM9_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q7KUM9_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12820\tTb927.9.12820\t\tGO:0030286\tGO_REF:0000012\tISA\tUniProtKB:Q7KUM9_DROME\tC\tdynein light chain, putative\tTb09.211.3770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q7KUM9_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q7KUM9_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12820\tTb927.9.12820\t\tGO:0042623\tGO_REF:0000012\tISA\tUniProtKB:Q7KUM9_DROME\tF\tdynein light chain, putative\tTb09.211.3770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q7KUM9_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q7KUM9_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12880\tSLK2\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tSTE20-like serine/threonine-protein kinase 2, putative\tTb09.211.3820\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13030\tTb927.9.13030\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9GU66_DROME\tC\tQA-SNARE protein putative\tTb09.211.3920\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9GU66_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9GU66_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14160\tRISP\t\tGO:0004362\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01416\tF\trieske iron-sulfur protein, mitochondrial precursor\tTb09.211.4700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01416", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14160\tRISP\t\tGO:0008121\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01416\tF\trieske iron-sulfur protein, mitochondrial precursor\tTb09.211.4700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01416", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14160\tRISP\t\tGO:0009060\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01416\tP\trieske iron-sulfur protein, mitochondrial precursor\tTb09.211.4700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01416", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14160\tRISP\t\tGO:0045275\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01416\tC\trieske iron-sulfur protein, mitochondrial precursor\tTb09.211.4700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01416", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14420\tPPIase\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPeptidyl-prolyl cis-trans isomerase C, mitochondrial, putative\tTb09.211.4880\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15460\tTb927.9.15460\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcalcium motive p-type ATPase, putative\tTb09.244.2570\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15980\tAT-A\t\tGO:0005337\tGO_REF:0000002\tISS\tUniProtKB:S29A3_RAT|InterPro:IPR002259\tF\tnucleoside transporter 1, putative\tTb09.244.2020|NT11\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: S29A3_RAT does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:S29A3_RAT", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15980\tAT-A\t\tGO:1901642\tGO_REF:0000002\tISS\tUniProtKB:S29A3_RAT|InterPro:IPR002259\tP\tnucleoside transporter 1, putative\tTb09.244.2020|NT11\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: S29A3_RAT does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:S29A3_RAT", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1670\tAUK3\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR0008271\tF\tAurora kinase 3, putative\tTb09.160.0570\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IPR0008271 does not match any id_syntax patterns for InterPro in dbxrefs", "obj": "InterPro:IPR0008271", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0000152\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0004843\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tF\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20150216\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0005634\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0006302\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tP\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0008237\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tF\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0030234\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tF\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20150216\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0070531\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0070536\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tP\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0070552\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1970\tTb927.9.1970\t\tGO:0000149\tGO_REF:0000012\tISA\tUniProtKB:ROP_DROME\tF\tsyntaxin binding protein 1, putative\tTb09.160.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ROP_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ROP_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.2580\tTb927.9.2580\t\tGO:0008612\tGO_REF:0000012\tISA\tUniProtKB:DOHH_HUMAN\tP\tdeoxyhypusine hydroxylase, putative\tTb09.160.1240\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DOHH_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DOHH_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.2580\tTb927.9.2580\t\tGO:0019135\tGO_REF:0000012\tISA\tUniProtKB:DOHH_HUMAN\tF\tdeoxyhypusine hydroxylase, putative\tTb09.160.1240\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DOHH_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DOHH_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.3120\tTb927.9.3120\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE/STE11 serine/threonine-protein kinase, putative\tTb09.160.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.3530\tLsm6\t\tGO:0030629\tGO_REF:0000012\tISA\tUniProtKB:LSM6_YEAST\tF\tU6 snRNA-associated Sm-like protein LSm6p\tTb09.160.2150\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LSM6_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LSM6_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4370\tTb927.9.4370\t\tGO:0004672\tGO_REF:0000012\tISA\tUniProtKB:Q9W4F8_DROME\tF\tGTPase activating protein, putative\tTb09.160.2980\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9W4F8_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9W4F8_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4500\tHSP70.a\t\tGO:0006457\tGO_REF:0000012\tISA\tUniProtKB:S01036\tP\theat shock protein, putative\tTb09.160.3090\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: S01036 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:S01036", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5210\tTb927.9.5210\t\tGO:0004819\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00440\tF\tglutaminyl-tRNA synthetase, putative\tTb09.160.3730\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00440", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5210\tTb927.9.5210\t\tGO:0005737\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00440\tC\tglutaminyl-tRNA synthetase, putative\tTb09.160.3730\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00440", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5210\tTb927.9.5210\t\tGO:0006425\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00440\tP\tglutaminyl-tRNA synthetase, putative\tTb09.160.3730\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00440", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0000836\tGO_REF:0000002\tISA\tUniProtKB:HRD1_YEAST\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0004842\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST\tF\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0004842\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST\tF\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0005783\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYVN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYVN1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0005789\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN|UniProtKB:HRD1_YEAST\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYVN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYVN1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0005789\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN|UniProtKB:HRD1_YEAST\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0006986\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYVN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYVN1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0030433\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST|UniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_SCHPO", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0030433\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST|UniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0030433\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST|UniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYVN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYVN1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0034620\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYVN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYVN1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5350\tTb927.9.5350\t\tGO:0007010\tGO_REF:0000024\tISS\tGeneDB:PF14_0124\tP\tactin related protein 3, putative\tTb09.160.3850\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PF14_0124 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:PF14_0124", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5440\tTb927.9.5440\t\tGO:0007010\tGO_REF:0000024\tISS\tGeneDB:PF14_0124\tP\tactin, putative\tTb09.160.3960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PF14_0124 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:PF14_0124", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5460\teif4g2\t\tGO:0006139\tGO_REF:0000012\tISA\tUniProtKB:IF4G1_HUMAN|UniProtKB:IF4F1_YEAST\tP\tEukaryotic translation initiation factor 4 gamma 2\tTb09.160.3980\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IF4G1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:IF4G1_HUMAN", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5460\teif4g2\t\tGO:0006139\tGO_REF:0000012\tISA\tUniProtKB:IF4G1_HUMAN|UniProtKB:IF4F1_YEAST\tP\tEukaryotic translation initiation factor 4 gamma 2\tTb09.160.3980\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IF4F1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:IF4F1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5650\tUFC1\t\tGO:0005739\tPMID:21264253\tISO\tGeneDB:LinJ15.1270\tC\tE2-like ubiquitin-conjugation enzyme, putative\tTb09.160.4150\tmRNA\ttaxon:185431\t20110201\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LinJ15.1270 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LinJ15.1270", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5650\tUFC1\t\tGO:0032182\tPMID:21264253\tISO\tGeneDB:LinJ15.1270\tF\tE2-like ubiquitin-conjugation enzyme, putative\tTb09.160.4150\tmRNA\ttaxon:185431\t20110201\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LinJ15.1270 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LinJ15.1270", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6060\tERV1\t\tGO:0005758\tGO_REF:0000012\tISA\tUniProtKB:ERV1_YEAST\tC\tPresent in the outer mitochondrial membrane proteome 4\tPOMP4|Tb09.160.4440\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ERV1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ERV1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6060\tERV1\t\tGO:0016972\tGO_REF:0000012\tISA\tUniProtKB:ERV1_YEAST\tF\tPresent in the outer mitochondrial membrane proteome 4\tPOMP4|Tb09.160.4440\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ERV1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ERV1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6060\tERV1\t\tGO:0045041\tGO_REF:0000012\tISA\tUniProtKB:ERV1_YEAST\tP\tPresent in the outer mitochondrial membrane proteome 4\tPOMP4|Tb09.160.4440\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ERV1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ERV1_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6070\tRPS3\t\tGO:0003735\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01008\tF\t40S ribosomal protein S3, putative\tTb09.160.4450\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01008", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6070\tRPS3\t\tGO:0042254\tGO_REF:0000012\tISA\tUniProtKB:RS3_DROME\tP\t40S ribosomal protein S3, putative\tTb09.160.4450\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RS3_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RS3_DROME", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6310\tTb927.9.6310\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\tTb09.160.4600\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6430\tTb927.9.6430\t\tGO:0005968\tGO_REF:0000024\tISS\tUniProtKB:UniProtKB:P26374\tC\tRab geranylgeranyl transferase component A, putative\tTb09.160.4680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UniProtKB:P26374 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UniProtKB:P26374", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6880\tTb927.9.6880\t\tGO:0004115\tGO_REF:0000012\tISA\tUniProtKB:PDE4A_MOUSE\tF\tcAMP-specific phosphodiesterase, putative\tTb09.160.5030\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PDE4A_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PDE4A_MOUSE", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6940\tTb927.9.6940\t\tGO:0000287\tGO_REF:0000024\tISO\tGeneDB:LdBPK_040070.1\tF\tDNA topoisomerase type IB small subunit\tTb09.160.5070\tmRNA\ttaxon:185431\t20110706\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_040070.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_040070.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6940\tTb927.9.6940\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:LdBPK_040070.1\tF\tDNA topoisomerase type IB small subunit\tTb09.160.5070\tmRNA\ttaxon:185431\t20110706\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_040070.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_040070.1", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7700\tTb927.9.7700\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:BAC22089\tP\tpalmitoyl acyltransferase 1, putative\tTb09.160.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BAC22089 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BAC22089", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7700\tTb927.9.7700\t\tGO:0006897\tGO_REF:0000012\tISA\tUniProtKB:BAC22089\tP\tpalmitoyl acyltransferase 1, putative\tTb09.160.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BAC22089 does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BAC22089", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7700\tTb927.9.7700\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 1, putative\tTb09.160.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8160\tJ11\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb09.211.0140\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9000\tidi1\t\tGO:0008299\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR02151\tP\tisopentenyl-diphosphate delta-isomerase (type II)\tTb09.211.0700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR02151", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9020\tRBG2\t\tGO:0002181\tGO_REF:0000012\tISA\tUniProtKB:RBG2_YEAST\tP\tribosome-interacting GTPase 2, putative\tTb09.211.0720\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RBG2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RBG2_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9060\tLSM12\t\tGO:0010494\tGO_REF:0000002\tISA\tUniProtKB:LSM12_YEAST\tC\tLsm12 protein, putative\tTb09.211.0740\tmRNA\ttaxon:185431\t20120720\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LSM12_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LSM12_YEAST", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9120\tTb927.9.9120\t\tGO:0006400\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00091\tP\ttRNA (guanine-N(7)-)-methyltransferase, putative\tTb09.211.0790\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00091", "taxon": "NCBITaxon:185431", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9120\tTb927.9.9120\t\tGO:0008176\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00091\tF\ttRNA (guanine-N(7)-)-methyltransferase, putative\tTb09.211.0790\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR00091", "taxon": "NCBITaxon:185431", "rule": 27 } ], "gorule-0000020": [ { "level": "ERROR", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0000002\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20180824\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0000002", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0000002\tPMID:23125353\tIMP\t\tP\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20170615\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0000002", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.3290\tp166\t\tGO:0000002\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 166\tTb11.02.0800\tmRNA\ttaxon:185431\t20180824\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0000002", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.2.6100\tTb927.2.6100\t\tGO:0000002\tPMID:23650088\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20200409\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0000002", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.1000\tPIF8\t\tGO:0000002\tPMID:22220754\tIMP\t\tP\tDNA repair and recombination helicase protein PIF1, putative\t\tmRNA\ttaxon:185431\t20170518\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0000002", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.10860\tNOB1\t\tGO:0000478\tPMID:27965085\tIDA\t\tP\tNin one binding (NOB1) Zn-ribbon like, putative\tTb11.01.2630\tmRNA\ttaxon:185431\t20170707\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0000478", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.4310\tPHB2\t\tGO:0001302\tGO_REF:0000012\tISA\tUniProtKB:P40961\tP\tprohibitin 2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0001302", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.210\tPRODH\t\tGO:0001306\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506411.30\tP\tProline dehydrogenase, mitochondrial\t\tmRNA\ttaxon:185431\t20160728\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0001306", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.8450\tADKG\t\tGO:0004127\tPMID:15657034\tIDA\t\tF\tadenylate kinase\tTb09.211.0350\tmRNA\ttaxon:185431\t20090602\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0004127", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0004738\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01349\tF\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0004738", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.3890\tTb927.11.3890\t\tGO:0004809\tGO_REF:0000011\tISM\tInterPro:IPR002905\tF\tN(2), N(2)-dimethylguanosine tRNA methyltransferase, putative\tTb11.02.1390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0004809", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.3280\tKIN13-5\t\tGO:0005623\tPMID:20808899\tIDA\t\tC\tKinesin-13 5, putative\tTb11.02.0790\tmRNA\ttaxon:185431\t20100909\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005623", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0005844\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tC\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.10560\tEIF4G4\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\teukaryotic translation initiation factor 4 gamma 4\tTb11.01.2330\tmRNA\ttaxon:185431\t20200402\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.11770\tEIF4E3\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\tEukaryotic translation initiation factor 4E-3\tTb11.01.3630\tmRNA\ttaxon:185431\t20200402\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.740\tEIF5A\t\tGO:0005844\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506925.120\tC\teukaryotic translation initiation factor 5A\tTb11.03.0410\tmRNA\ttaxon:185431\t20160728\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.2.3030\tTb927.2.3030\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\tATP-dependent Clp protease subunit, heat shock protein 78 (HSP78), putative\t\tmRNA\ttaxon:185431\t20200401\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.4.1270\tTb927.4.1270\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\truvB-like DNA helicase, putative\t\tmRNA\ttaxon:185431\t20200401\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.6.1870\tEIF4E4\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\tEukaryotic translation initiation factor 4E-4\t\tmRNA\ttaxon:185431\t20200402\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.6.4440\tRBP42\t\tGO:0005844\tPMID:22966087\tIDA\t\tC\tRNA-binding protein 42 (RNA-binding motif protein 42)\t\tmRNA\ttaxon:185431\t20130820\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.4540\tPBP1\t\tGO:0005844\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tC\tPAB1-binding protein , putative\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.4820\tEIF4G3\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\teukaryotic translation initiation factor 4 gamma 3\t\tmRNA\ttaxon:185431\t20200402\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.4680\tEIF4A1\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\tEukaryotic initiation factor 4A-1\tTb09.160.3270\tmRNA\ttaxon:185431\t20200402\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.8740\tDRBD3\t\tGO:0005844\tPMID:26287607\tHDA\t\tC\tDouble RNA binding domain protein 3\tTb09.211.0560|PTB1\tmRNA\ttaxon:185431\t20200402\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.160\tKPAP2\t\tGO:0006378\tPMID:17543398\tEXP\t\tP\tKinetoplast poly(A) polymerase 2\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.12750\tCPSF30\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tcleavage and polyadenylation specificity factor 30 kDa subunit\tTb11.01.4600\tmRNA\ttaxon:185431\t20161129\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.14380\tKPAF2\t\tGO:0006378\tPMID:21474072\tIDA\t\tP\tPentatricopeptide repeat protein (PPR), putative\tTb11.01.5980\tmRNA\ttaxon:185431\t20110531\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0006378\tGO_REF:0000012\tISA\tUniProtKB:Q96AF0\tP\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20161129\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0006378\tGO_REF:0000012\tISA\tUniProtKB:Q9LKF9\tP\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20161130\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.7960\tKPAP1\t\tGO:0006378\tPMID:18464794\tEXP\t\tP\tkinetoplast poly(A) polymerase 1\tTb11.02.5820|TUT5\tmRNA\ttaxon:185431\t20100706\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.2.3180\tKPAF1\t\tGO:0006378\tPMID:21474072\tIDA\t\tP\tPentatricopeptide repeat protein (PPR), putative\tPPR1\tmRNA\ttaxon:185431\t20110527\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.4.1340\tCPSF73\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tCleavage and polyadenylation specificity factor subunit\tCPSF3\tmRNA\ttaxon:185431\t20161201\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.4320\tFIP1\t\tGO:0006378\tPMID:26727667\tIPI\tGeneDB:Tb927.11.14560\tP\tPre-mRNA polyadenylation factor FIP1\t\tmRNA\ttaxon:185431\t20161201\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.6.1830\tCSTF50\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tCleavage stimulation factor subunit 50, putative\t\tmRNA\ttaxon:185431\t20161129\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.6.3690\tCFIIm\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tpre-mRNA cleavage complex II Clp1-like, conserved\t\tmRNA\ttaxon:185431\t20161201\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.1620\tCFIm25\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tnucleotide hydrolase, putative\t\tmRNA\ttaxon:185431\t20161201\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.3780\tPAP2\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tPolynucleotide adenylyltransferase 2\t\tmRNA\ttaxon:185431\t20170705\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.7490\tTb927.8.7490\t\tGO:0006378\tPMID:26727667\tIMP\t\tP\tsymplekin\t\tmRNA\ttaxon:185431\t20161201\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.14560\tCPSF160\t\tGO:0006379\tGO_REF:0000012\tISA\tUniProtKB:Q96AF0\tP\tCleavage and polyadenylation specificity factor CPSF160, putative\tTb11.01.6170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006379", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.230\tCPSF100\t\tGO:0006379\tGO_REF:0000012\tISA\tUniProtKB:Q9LKF9\tP\tcleavage and polyadenylation specificity factor subunit 2\tTb11.03.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006379", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.2.6000\tGPI-PLC\t\tGO:0006507\tPMID:9574933\tTAS\t\tP\tglycosylphosphatidylinositol-specific phospholipase C\t1F7.370\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006507", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0006568\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006568", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0006568\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006568", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.1970\tTb927.9.1970\t\tGO:0006904\tGO_REF:0000011\tISM\tInterPro:IPR001619\tP\tsyntaxin binding protein 1, putative\tTb09.160.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006904", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.3560\tPRMT1-PRO\t\tGO:0008469\tGO_REF:0000012\tISA\tUniProtKB:CARM1_DROME\tF\tProtein arginine N-methyltransferase 1, prozyme\tPRMT3\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0008469", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.640\tPRMT5\t\tGO:0008469\tPMID:17601874\tIDA\t\tF\targinine N-methyltransferase, type II\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0008469", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.3960\tPRMT6\t\tGO:0008469\tPMID:20418380\tIDA\t\tF\targinine N-methyltransferase, type I\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0008469", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.2900\tKAP95\t\tGO:0008565\tGO_REF:0000024\tISS\t\tF\timportin beta-1 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0008565", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.8450\tADKG\t\tGO:0009041\tPMID:15657034\tIDA\t\tF\tadenylate kinase\tTb09.211.0350\tmRNA\ttaxon:185431\t20090602\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0009041", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.7100\tACC\t\tGO:0009343\tGO_REF:0000011\tISM\tInterPro:IPR000022\tC\tacetyl-CoA carboxylase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0009343", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.13640\tJBP1\t\tGO:0016458\tPMID:10562569\tTAS\t\tP\tJ-binding protein\tTb11.01.5220\tmRNA\ttaxon:185431\t20090901\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016458", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.7420\tBDF2\t\tGO:0016570\tPMID:19136002\tISO\tGeneDB:TcCLB.506553.20\tP\tbromodomain factor 2 protein, putative\t\tmRNA\ttaxon:185431\t20110502\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016570", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.3560\tPRMT1-PRO\t\tGO:0016571\tGO_REF:0000012\tISA\tUniProtKB:Q8K1Y5\tP\tProtein arginine N-methyltransferase 1, prozyme\tPRMT3\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016571", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.8310\tHAT3\t\tGO:0016573\tGO_REF:0000012\tISA\tUniProtKB:Q8CHK4\tP\thistone acetyltransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016573", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0016573\tGO_REF:0000012\tISA\tUniProtKB:Q08649\tP\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016573", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0016573\tPMID:18631159\tIDA\t\tP\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20170427\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016573", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.11530\tHAT2\t\tGO:0016573\tPMID:32198348\tIMP\t\tP\thistone acetyltransferase, putative\tTb11.01.3380\tmRNA\ttaxon:185431\t20200715\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016573", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.4560\tHAT1\t\tGO:0016573\tPMID:32198348\tIMP\t\tP\tSAS2-related acetyltransferase 1\tESA1\tmRNA\ttaxon:185431\t20200715\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016573", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.3310\tELP3b\t\tGO:0016573\tPMID:21357738\tTAS\t\tP\tElongator-like Protein 3b\t\tmRNA\ttaxon:185431\t20110712\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016573", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0016575\tGO_REF:0000012\tISA\tUniProtKB:HDAC1_MOUSE\tP\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016575", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.15600\tHDAC2\t\tGO:0016575\tGO_REF:0000011\tISM\tInterPro:IPR000286\tP\thistone deacetylase 2\tTb11.01.7240|HDO2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016575", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.2900\tHDAC4\t\tGO:0016575\tGO_REF:0000012\tISA\tUniProtKB:HDAC1_MOUSE\tP\thistone deacetylase 4\tHDO4\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016575", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.4690\tPOLIB\t\tGO:0016797\tGO_REF:0000011\tISM\tInterPro:IPR006055\tF\tmitochondrial DNA polymerase I protein B\tTb11.02.2300\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016797", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.1.570\tDOT1B\t\tGO:0018024\tPMID:16916638\tIDA\t\tF\tHistone H3-K76 methyltransferase\t\tmRNA\ttaxon:185431\t20090717\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0018024", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.17040\tACP1\t\tGO:0019933\tPMID:10637587\tTAS\t\tP\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.01.8820|GRESAG4\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0019933", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0031935\tPMID:21076155\tIMP\t\tP\tISWI complex protein\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031935", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.1.630\tASF1A\t\tGO:0031936\tGO_REF:0000002\tISA\tUniProtKB:Q9Y294\tP\thistone chaperone ASF1A\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031936", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.1680\tHDAC1\t\tGO:0031936\tPMID:20624216\tIMP\t\tP\thistone deacetylase 1\tDAC1|HDO1\tmRNA\ttaxon:185431\t20100914\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031936", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.2.2190\tHDAC3\t\tGO:0031936\tPMID:20624217\tIMP\t\tP\thistone deacetylase 3\t\tmRNA\ttaxon:185431\t20100914\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031936", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.11960\tPNUTS\t\tGO:0031940\tPMID:32084124\tIMP\t\tP\tSerine/threonine-protein phosphatase 1 regulatory subunit, putative\t\tmRNA\ttaxon:185431\t20200723\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031940", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0033955\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20180824\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.6060\tUMSBP2\t\tGO:0033955\tPMID:18048338\tIMP\t\tP\tuniversal minicircle sequence binding protein 2\t\tmRNA\ttaxon:185431\t20141124\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.6070\tUMSBP1\t\tGO:0033955\tPMID:18048338\tIMP\t\tP\tuniversal minicircle sequence binding protein 1\t\tmRNA\ttaxon:185431\t20141124\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.10240\tHsIV\t\tGO:0033955\tPMID:18421378\tIMP\t\tP\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tTb11.01.2000\tmRNA\ttaxon:185431\t20141126\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.2440\tTBCCD1\t\tGO:0033955\tPMID:24101722\tIMP\t\tP\tTubulin cofactor C domain-containing protein 1\tTb11.02.0040\tmRNA\ttaxon:185431\t20140414\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.3290\tp166\t\tGO:0033955\tPMID:29434039\tIMP\t\tP\tTripartite attachment complex protein 166\tTb11.02.0800\tmRNA\ttaxon:185431\t20180824\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.830\tTAC65\t\tGO:0033955\tPMID:27436903\tIMP\t\tP\tTripartite attachment complex protein 65\t\tmRNA\ttaxon:185431\t20160725\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.2390\tTAC102\t\tGO:0033955\tPMID:27168148\tIMP\t\tP\tTripartite attachment complex protein 102\t\tmRNA\ttaxon:185431\t20160531\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.5700\tpATOM36\t\tGO:0033955\tPMID:27436903\tIMP\t\tP\tperipherally associated ATOM36\t\tmRNA\ttaxon:185431\t20160725\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.3960\tPRMT6\t\tGO:0034969\tPMID:20418380\tIDA\t\tP\targinine N-methyltransferase, type I\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0034969", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.5490\tPRMT7\t\tGO:0034969\tPMID:19254949\tIDA\t\tP\targinine N-methyltransferase, type III\t\tmRNA\ttaxon:185431\t20100521\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0034969", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.7210\tEIF2AK1\t\tGO:0035174\tGO_REF:0000002\tISS\t\tF\teukaryotic translation initiation factor 2-alpha kinase 1, putative\tTb11.02.5050\tmRNA\ttaxon:185431\t20040723\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0035174", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.13210\tTb927.10.13210\t\tGO:0035268\tPMID:14973778\tIC\t\tP\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\t\tmRNA\ttaxon:185431\t20100823\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0035268", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.890\tOST\t\tGO:0035268\tPMID:20382188\tIMP\t\tP\toligosaccharyl transferase subunit, putative\t\tmRNA\ttaxon:185431\t20100903\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0035268", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0042624\tGO_REF:0000002\tISS\t\tF\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20120807\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0042624", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.3.3160\tPAP1\t\tGO:0043629\tPMID:28456523\tIMP\t\tP\tKKT-interacting protein 8\tKKIP8\tmRNA\ttaxon:185431\t20170515\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043629", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb11.02.5120b\tTb11.02.5120b\t\tGO:0043631\tPMID:18951088\tISO\tGeneDB:Tb927.11.7218\tP\tmitochondrial edited mRNA stability factor 1 subunit, putative\t\tmRNA\ttaxon:185431\t20130730\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.380\tKRIPP5\t\tGO:0043631\tPMID:18951088\tIDA\t\tP\tmitochondrial RNA binding complex 1 subunit\tPPR5\tmRNA\ttaxon:185431\t20120912\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.6850\tMRPS18\t\tGO:0043631\tPMID:18951088\tIDA\t\tP\tMitochondrial ribosomal protein S18, putative\tbS18m\tmRNA\ttaxon:185431\t20120917\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.1250\tmS35\t\tGO:0043631\tPMID:22396527\tIDA\t\tP\tMitochondrial SSU ribosomal protein, putative\tTb11.47.0024\tmRNA\ttaxon:185431\t20120912\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.15850\tmt-SAF5\t\tGO:0043631\tPMID:22396527\tIDA\t\tP\tMitoribosomal SSU assembly factor 5\tTb11.01.7510\tmRNA\ttaxon:185431\t20120912\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.2530\tmS52\t\tGO:0043631\tPMID:18951088\tIDA\t\tP\tMitochondrial SSU ribosomal protein, putative\tTb11.02.0130\tmRNA\ttaxon:185431\t20120917\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.7218\tMERS2\t\tGO:0000963\tPMID:22396527\tIC\tGO:0048255|GO:0043631\tP\tmitochondrial edited mRNA stability factor 1 subunit\tTb11.02.5120\tmRNA\ttaxon:185431\t20160922\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.7218\tMERS2\t\tGO:0043631\tPMID:18951088\tIDA\t\tP\tmitochondrial edited mRNA stability factor 1 subunit\tTb11.02.5120\tmRNA\ttaxon:185431\t20120917\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.3.3450\tARL3A\t\tGO:0044008\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3, putative\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044008", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.3.4860\tMKK1\t\tGO:0044008\tPMID:22985893\tIMP\t\tP\tmitogen-activated protein kinase kinase 1\t\tmRNA\ttaxon:185431\t20151006\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044008", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.9270\tZFK\t\tGO:0044131\tPMID:11454198\tIMP\t\tP\tzinc finger protein kinase, putative\tTb11.01.1030\tmRNA\ttaxon:185431\t20140106\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044131", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.3550\tTb927.11.3550\t\tGO:0044376\tGO_REF:0000024\tISO\tUniProtKB:P47122\tP\tXPA-interacting protein, putative\tTb11.02.1040\tmRNA\ttaxon:185431\t20171121\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044376", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.660\tTb927.10.660\t\tGO:0047101\tGO_REF:0000012\tISA\tUniProtKB:P12694\tF\t2-oxoisovalerate dehydrogenase alpha subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0047101", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.4680\tNH5\tNOT\tGO:0050072\tPMID:26038549\tIDA\t\tF\tMutt-Nudix-related hydrolase 5, putative\tNudix5\tmRNA\ttaxon:185431\t20150714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0050072", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.9810\tNH3\tNOT\tGO:0050072\tPMID:26038549\tIDA\t\tF\tNUDIX hydrolase 3, putative\tNudix3|Tb11.01.1570\tmRNA\ttaxon:185431\t20150714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0050072", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.4350\tNH2\tNOT\tGO:0050072\tPMID:26038549\tIDA\t\tF\tNudix hydrolase 2\tNudix2\tmRNA\ttaxon:185431\t20150714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0050072", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.6.2670\tNH4\t\tGO:0050072\tPMID:26038549\tIDA\t\tF\tNudix hydrolase 4\tNudix4\tmRNA\ttaxon:185431\t20150714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0050072", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.1.1230\tJ47\t\tGO:0051082\tGO_REF:0000002\tISM\t\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.1.1960\tJ16\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.1.4300\tJ17\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.1060\tTCP-1-delta\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, delta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.12380\tJ42\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.12530\tJ13\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.12640\tJ37\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.14730\tJ15\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.2290\tJ3\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR001305\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.5040\tJ20\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:P10809\tF\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:P10809\tF\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.6610\tJ22\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0051082\tGO_REF:0000002\tISS\t\tF\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.7620\tFtsH76\t\tGO:0051082\tGO_REF:0000002\tISS\t\tF\tmitochondrial ATP-dependent zinc metallopeptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.8190\tTb927.10.8190\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, theta subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.8540\tJ6\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR002939\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.9840\tJ33\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.14250\tTCP-1-epsilon\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, epsilon subunit, putative\tTb11.01.5860\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:CH60_MOUSE\tF\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.16150\tTb927.11.16150\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR004226\tF\ttubulin binding cofactor A, putative\tTb11.01.7825\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.16740\tJ45\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR001305\tF\tchaperone protein DnaJ, putative\tTb11.01.8480\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.16760\tTCP-1-alpha\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, alpha subunit, putative\tTb11.01.8510\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.1900\tTb927.11.1900\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, beta subunit, putative\tTb11.42.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.3240\tTCP-1-zeta\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, zeta subunit, putative\tTb11.02.0750\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.2.3030\tTb927.2.3030\t\tGO:0051082\tGO_REF:0000011\tISM\t\tF\tATP-dependent Clp protease subunit, heat shock protein 78 (HSP78), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.2.3960\tJ56\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.2.5160\tJ2\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR001305\tF\tChaperone protein DnaJ 2\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.3.1430\tJ46\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR001305\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.3.1760\tJ36\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.3.2290\tJ32\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.4.2970\tJ12\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.4.3980\tJ41\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.4.650\tJ19\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.2880\tJ14\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.6.2480\tJ49\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.6.3120\tJ24\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.6.3730\tJ38\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.6.3850\tJ9\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.1320\tHSP10\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR001476\tF\t10 kDa heat shock protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.1340\tHSP10\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00166\tF\t10 kDa heat shock protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.2070\tTb927.7.2070\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:002939\tF\theat shock protein DNAJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.4590\tJ35\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.540\tJ21\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.6200\tJ26\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.6660\tJ10\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.680\tJ25\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.740\tJ28\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.990\tJ31\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.3150\tTCP-1-gamma\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, gamma subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.10010\tJ34\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\tTb09.211.1550\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.10950\tJ43\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\tTb09.211.2290\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.11270\tTCP-1-eta\t\tGO:0051082\tGO_REF:0000012\tISA\tUniProtKB:Q99832\tF\tT-complex protein 1, eta subunit, putative\tTb09.211.2570\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.12730\tJ50\t\tGO:0051082\tGO_REF:0000011\tISM\tInterPro:IPR001305\tF\tchaperone protein DnaJ, putative\tTb09.211.3680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.14180\tJ39\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\tTb09.211.4720\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.8160\tJ11\t\tGO:0051082\tGO_REF:0000011\tISM\tPfam:PF00226\tF\tchaperone protein DnaJ, putative\tTb09.211.0140\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.8410\tJ27\t\tGO:0051082\tGO_REF:0000011\tISM\t\tF\tchaperone protein DnaJ, putative\tJ8|Tb09.211.0330\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0051082", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.1880\tISP2\t\tGO:0052190\tGO_REF:0000024\tISO\tGeneDB:LmjF.15.0510\tP\tecotin family (I11), putative\t\tmRNA\ttaxon:185431\t20110418\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052190", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.4.1050\tIP5K\t\tGO:0052746\tPMID:28792096\tIDA\t\tP\tinositol-pentakisphosphate 2-kinase\t\tmRNA\ttaxon:185431\t20170922\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052746", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.4400\tIP6K\t\tGO:0052746\tPMID:28792096\tIDA\t\tP\tinositol hexakisphosphate kinase\t\tmRNA\ttaxon:185431\t20170922\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052746", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.12470\tIPMK\t\tGO:0052746\tPMID:28792096\tIDA\t\tP\tinositol polyphosphate multikinase\tTb09.211.3460\tmRNA\ttaxon:185431\t20170922\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052746", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb11.02.5420b\tTb11.02.5420b\t\tGO:0055114\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5420\tP\tNADPH-cytochrome p450 reductase, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.1.4100\tCOXIV\t\tGO:0055114\tPMID:12467979\tTAS\t\tP\tcytochrome oxidase subunit IV\t\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.10420\tTb927.10.10420\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.12540\tNDUFS1\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.280\tCOXVI\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tcytochrome oxidase subunit VI\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.7090\tAOX\t\tGO:0055114\tPMID:12188215\tTAS\t\tP\tAlternative oxidase, mitochondrial\tTAO\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.11780\tTb927.11.11780\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tacyl-CoA dehydrogenase, putative\tTb11.01.3640\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.1310\tB5R\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADH-cytochrome b5 reductase, putative\tTb11.47.0018\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20100714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.1370\tGRX1\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tDithiol glutaredoxin 1\tTb11.47.0012\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.15550\tB5R\t\tGO:0055114\tGO_REF:0000011\tISM\tInterPro:IPR001433\tP\tNADH-cytochrome b5 reductase, putative\tTb11.01.7190\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.16160\tTb927.11.16160\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tATP binding protein-like protein\tTb11.01.7830\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.16730\tGCVL-2\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tdihydrolipoyl dehydrogenase\tTb11.01.8470\tmRNA\ttaxon:185431\t20100714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.180\tTb927.11.180\t\tGO:0055114\tGO_REF:0000011\tISM\tInterPro:IPR000049\tP\telectron transfer flavoprotein, putative\tTb11.03.0950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.3750\tB5R\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADH-cytochrome b5 reductase, putative\tTb11.02.1230\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.4430\tFR1\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tferric reductase transmembrane protein, putative\tTb11.02.1990\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.6970\tTb927.11.6970\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADH-cytochrome b5 reductase-like protein\tTb11.02.4800\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.7540\tTb927.11.7540\t\tGO:0055114\tGO_REF:0000011\tISM\tInterPro:IPR001308\tP\telectron-transfer-flavoprotein, alpha polypeptide, putative\tTb11.02.5530\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.8380\tCPR\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADPH--cytochrome P450 reductase, putative\tTb11.01.0170\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.9560\tTb927.11.9560\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\toxidoreductase, putative\tTb11.01.1320\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.4.2450\tPDI-1\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tthioredoxin, putative\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.950\tTb927.5.950\t\tGO:0055114\tPMID:18669638\tISS\t\tP\tmonothiol glutaredoxin, putative\t\tmRNA\ttaxon:185431\t20110607\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.1890\tCYC1\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tcytochrome c1, heme protein, mitochondrial, putative\tCYT1\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.1990\tmPRX\t\tGO:0055114\tPMID:11522350\tTAS\t\tP\tperoxidoxin\tTRYP2\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.3380\tSDH2N\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tsuccinate dehydrogenase iron-sulfur subunit\t\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.7380\tTb927.8.7380\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tdihydrolipoamide dehydrogenase, point mutation\t\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.13250\tCPR\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tNADPH--cytochrome P450 reductase, putative\tTb09.211.4110\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.2450\tTb927.9.2450\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\telecton transport protein SCO1/SCO2, putative\tTb09.160.1140\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.3590\tTb927.9.3590\t\tGO:0055114\tPMID:18669638\tISS\t\tP\tmonothiol glutaredoxin, putative\tTb09.160.2210\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.5770\tTRYP1\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\ttryparedoxin peroxidase\tTb09.160.4250|Tb927.9.5750\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.5860\tTRYP1\t\tGO:0055114\tPMID:11522350\tTAS\t\tP\ttryparedoxin peroxidase\tTb09.160.4280|Tb927.9.5840\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.8680\tTb927.9.8680\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tcytochrome c oxidase assembly factor, putative\tTb09.211.0510\tmRNA\ttaxon:185431\t20100714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.3.1840\tTb927.3.1840\t\tGO:0070085\tPMID:20637498\tISS\t\tP\t3-oxo-5-alpha-steroid 4-dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20100922\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0070085", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.1680\tTb927.9.1680\t\tGO:0070537\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tP\tLys-63-specific deubiquitinase BRCC36, putative\tTb09.160.0580\tmRNA\ttaxon:185431\t20130904\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0070537", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.11970\tGlnAT\t\tGO:0070548\tPMID:19443056\tIDA\t\tF\tglutamine aminotransferase (GlnAT)\t\tmRNA\ttaxon:185431\t20130524\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0070548", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "GeneDB\tTb927.8.8210:mRNA\tCSTF64\t\tGO:0098789\tPMID:26727667\tIPI\tGeneDB:Tb927.11.14560\tP\tCleavage stimulating factor 64, putative\t\tmRNA\ttaxon:185431\t20161129\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0098789", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.6310\tPLK\t\tGO:1901916\tPMID:26929336\tIDA\t\tF\tpolo-like protein kinase\t\tmRNA\ttaxon:185431\t20160713\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:1901916", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.15050\tDRC4\t\tGO:1904526\tGO_REF:0000012\tISA\tUniProtKB:Q60779\tP\ttrypanin-like protein\tTb09.244.2800|GAS8\tmRNA\ttaxon:185431\t20160719\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:1904526", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.9410\tSPS2\t\tGO:1904577\tPMID:33017394\tIMP\t\tP\tSelenophosphate synthetase 2\tSEPHS2\tmRNA\ttaxon:185431\t20210726\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:1904577", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.180\tATPF1G\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tATP synthase F1 subunit gamma protein, putative\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5050\tTb927.10.5050\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tmitochondrial ATP synthase epsilon chain\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5050\tTb927.10.5050\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tmitochondrial ATP synthase epsilon chain\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1380\tATPB\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tATP synthase subunit beta, mitochondrial\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1380\tATPB\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tATP synthase subunit beta, mitochondrial\t\tmRNA\ttaxon:185431\t20141208\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4990\tTb927.6.4990\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tmitochondrial ATP synthase delta chain\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4990\tTb927.6.4990\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tmitochondrial ATP synthase delta chain\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7420\tATPF1A\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tATP synthase alpha chain, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7420\tATPF1A\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tATP synthase alpha chain, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7430\tATPF1A\t\tGO:0000275\tPMID:29247468\tIDA\t\tC\tATP synthase alpha chain, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20180905\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7430\tATPF1A\t\tGO:0000275\tPMID:19436713\tIDA\t\tC\tATP synthase alpha chain, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0000276\tPMID:19436713\tIDA\t\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000276", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0000276\tPMID:19436713\tIDA\t\tC\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000276", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1710\tP18\t\tGO:0000276\tPMID:19436713\tIPI\tGeneDB:Tb927.5.1710\tC\tATP synthase F1 subunit p18, mitochondrial\t\tmRNA\ttaxon:185431\t20170518\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000276", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1470\tATPc3\t\tGO:0000276\tPMID:23326569\tIDA\t\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000276", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1630\tABCE1\t\tGO:0000291\tPMID:14668021\tIDA\t\tP\tatp-binding cassette sub-family e member 1\tRL1\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000291", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.370\tRAP1\t\tGO:0000784\tPMID:19345190\tEXP\t\tC\trepressor activator protein 1\tTb11.03.0760\tmRNA\ttaxon:185431\t20090417\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000784", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9130\tRPA1\t\tGO:0000784\tGO_REF:0000024\tISO\tUniProtKB:Q5MY89\tC\tReplication factor A protein 1\tTb11.01.0870\tmRNA\ttaxon:185431\t20160802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000784", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5030\tKU70\t\tGO:0000784\tPMID:11919193\tIC\tGO:0000722\tC\tKU70 protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000784", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5780\tMTRNAP\t\tGO:0001065\tPMID:11859084\tIMP\t\tF\tDNA-directed RNA polymerase, mitochondrial\tTb11.02.3530\tmRNA\ttaxon:185431\t20150622\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0001065", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.850\tNOT2\t\tGO:0001104\tPMID:18442996\tISO\tUniProtKB:CNOT2_HUMAN\tF\tccr4-not transcription complex subunit 2\t\tmRNA\ttaxon:185431\t20140609\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0001104", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.835\tTER\t\tGO:0003721\tPMID:23523918\tIMP\t\tF\ttelomerase RNA component\t\tsnoRNA\ttaxon:185431\t20130828\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003721", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4010\tTb927.1.4010\t\tGO:0003896\tPMID:21257796\tIDA\t\tF\tprimase 2\t\tmRNA\ttaxon:185431\t20120425\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2520\tppl2\tNOT\tGO:0003896\tPMID:24267450\tIDA\t\tF\tPrimPol-like protein 2\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3110\tpril\t\tGO:0003896\tGO_REF:0000011\tISM\tInterPro:IPR007238\tF\tDNA primase large subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4070\tppl1\t\tGO:0003896\tPMID:24267450\tIDA\t\tF\tPrimPol-like protein 1\t\tmRNA\ttaxon:185431\t20140303\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2550\tPRI1\t\tGO:0003896\tPMID:20065037\tIDA\t\tF\tmitochondrial DNA primase\t\tmRNA\ttaxon:185431\t20100204\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1690\tSIR2RP1\t\tGO:0003956\tPMID:19895577\tIDA\t\tF\tSilent information regulator 2 related protein 1\tSIR2\tmRNA\ttaxon:185431\t20091126\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003956", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.910\tTbPIF6\t\tGO:0004003\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF6\t\tmRNA\ttaxon:185431\t20110824\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11800\tTbPIF3\t\tGO:0004003\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF3\tTb11.01.3660\tmRNA\ttaxon:185431\t20110829\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12600\tTb927.11.12600\t\tGO:0004003\tGO_REF:0000011\tISM\tInterPro:IPR000212\tF\tATP-dependent DNA helicase, putative\tTb11.01.4440\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14790\tPIF4\t\tGO:0004003\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF4\tTb11.01.6420\tmRNA\ttaxon:185431\t20110829\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6890\tPIF1\t\tGO:0004003\tPMID:20042610\tIDA\t\tF\tDNA repair and recombination helicase protein PIF1\tTb11.02.4730\tmRNA\ttaxon:185431\t20110822\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6900\tPIF2\t\tGO:0004003\tPMID:19646907\tIDA\t\tF\tDNA repair and recombination helicase protein PIF2\tTb11.02.4740\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1620\tTb927.1.1620\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:DDX51_DROME\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5280\tTb927.10.5280\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tF\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7280\tTb927.10.7280\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tF\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9130\tTb927.10.9130\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tF\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5730\tTb927.11.5730\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q92620\tF\tpre-mRNA-splicing factor ATP-dependent RNA helicase, putative\tTb11.02.3460\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0004004\tPMID:21321231\tIDA\t\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20160927\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4680\tEIF4A1\t\tGO:0004004\tGO_REF:0000024\tISO\tGeneDB:LinJ.01.0800|GeneDB:LinJ.01.0790\tF\tEukaryotic initiation factor 4A-1\tTb09.160.3270\tmRNA\ttaxon:185431\t20090402\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1260\tTb927.11.1260\t\tGO:0004008\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01511\tF\tcopper-transporting ATPase-like protein, putative\tTb11.47.0023\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004008", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9560\tTb927.10.9560\t\tGO:0004024\tGO_REF:0000011\tISM\tInterPro:IPR002085\tF\toxidoreductase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004024", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3970\tTb927.8.3970\t\tGO:0004024\tGO_REF:0000011\tISM\tInterPro:IPR002085\tF\toxidoreductase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004024", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7190\tENR1\t\tGO:0004024\tGO_REF:0000011\tISM\tInterPro:IPR002085\tF\tNADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit, putative\tTb09.160.5260\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004024", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4700\tTb927.11.4700\t\tGO:0004033\tGO_REF:0000011\tISM\tPfam:PF00248\tF\tprostaglandin f synthase\tTb11.02.2310\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004033", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5360\tTb927.11.5360\t\tGO:0004033\tGO_REF:0000012\tISA\tUniProtKB:P14065\tF\taldo/keto reductase, putative\tTb11.02.3040\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004033", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3530\tG3PDH\t\tGO:0004367\tPMID:8920003\tIDA\t\tF\tglycerol-3-phosphate dehydrogenase [NAD+], glycosomal\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004367", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10580\tTb927.9.10580\t\tGO:0004395\tGO_REF:0000002\tISS\t\tF\t3-demethylubiquinone-9 3-methyltransferase, putative\tTb09.211.1960\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004395", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.160\tKPAP2\t\tGO:0004652\tPMID:17543398\tEXP\t\tF\tKinetoplast poly(A) polymerase 2\t\tmRNA\ttaxon:185431\t20100706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004652", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7960\tKPAP1\t\tGO:0004652\tPMID:18464794\tEXP\t\tF\tkinetoplast poly(A) polymerase 1\tTb11.02.5820|TUT5\tmRNA\ttaxon:185431\t20100706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004652", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3950\tKRET1\t\tGO:0004652\tPMID:11893335\tISS\tProsite:PS00522\tF\tRNA-editing 3' terminal uridylyl transferase 1\tTUTase|RET1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004652", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6090\tTb927.9.6090\t\tGO:0004724\tPMID:20551176\tIDA\t\tF\tPTP1-interacting protein, 39 kDa\tTb09.160.4460\tmRNA\ttaxon:185431\t20110105\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004724", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6100\tPIP39\t\tGO:0004724\tPMID:20551176\tIDA\t\tF\tPTP1-interacting protein, 39 kDa\tTb09.160.4480\tmRNA\ttaxon:185431\t20171123\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004724", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8440\tTHT1-\t\tGO:0005355\tPMID:8423781\tIMP\t\tF\tglucose transporter 1B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005355", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8450\tTHT1E\t\tGO:0005355\tPMID:8423781\tIMP\t\tF\tglucose transporter 1E\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005355", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1890\tCYC1\t\tGO:0005746\tGO_REF:0000011\tISM\tInterPro:IPR002326\tC\tcytochrome c1, heme protein, mitochondrial, putative\tCYT1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005746", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.730\tTb927.1.730\t\tGO:0005747\tPMID:21610103\tIDA\t\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20140725\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0005747\tPMID:21610103\tIDA\t\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20141016\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2230\tTb927.10.2230\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2230\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\t\tmRNA\ttaxon:185431\t20141016\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15440\tTAP151\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15810\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.7090|LIR\tmRNA\ttaxon:185431\t20141210\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4490\tTb927.11.4490\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15810|GeneDB:Tb927.11.15440\tC\tlong-chain-fatty-acid-CoA ligase, putative\tTb11.02.2070\tmRNA\ttaxon:185431\t20141203\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9930\tNIDM\t\tGO:0005747\tPMID:21610103\tIDA\t\tC\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb11.01.1690\tmRNA\ttaxon:185431\t20120821\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3660\tTb927.3.3660\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.7.7330\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\t\tmRNA\ttaxon:185431\t20141219\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.860\tACP\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15440\tC\tMitoribosomal SSU assembly factor 32\tmt-LAF11|mt-SAF32|NDUFAB1\tmRNA\ttaxon:185431\t20141210\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.440\tTb927.4.440\t\tGO:0005747\tPMID:21610103\tIPI\tGeneDB:Tb927.11.15810\tC\tNADH:ubiquinone oxidoreductase, ESSS subunit, putative\t\tmRNA\ttaxon:185431\t20150127\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2490\tSDH7\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.509053.140\tC\tsuccinate dehydrogenase subunit 7\t\tmRNA\ttaxon:185431\t20170511\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005749", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4130\tSDH3\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511523.14\tC\tsuccinate dehydrogenase subunit 3\t\tmRNA\ttaxon:185431\t20170511\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005749", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6580\tSDH1\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511909.40\tC\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005749", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4280\tTb927.10.4280\t\tGO:0005750\tPMID:21610103\tIDA\t\tC\tubiquinol-cytochrome c reductase complex 14 kda protein\t\tmRNA\ttaxon:185431\t20170606\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005750", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16220\tTb927.11.16220\t\tGO:0005750\tPMID:21610103\tIDA\t\tC\tCytochrome b-c1 complex subunit, putative\tTb11.01.7900\tmRNA\ttaxon:185431\t20170606\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005750", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7430\tTb927.8.7430\t\tGO:0005750\tGO_REF:0000011\tISM\tInterPro:IPR003422\tC\tubiquinol-cytochrome c reductase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005750", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4100\tCOXIV\t\tGO:0005751\tPMID:12467979\tISO\tGeneDB:LtaP12.0690\tC\tcytochrome oxidase subunit IV\t\tmRNA\ttaxon:185431\t20150713\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005751", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0005753\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tC\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8030\tATP5\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit 5\tOSCP\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9830\tTb927.10.9830\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1270\tTb927.11.1270\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.47.0022\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0005753\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tC\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.600\tTb927.11.600\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.03.0475\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6250\tTb927.11.6250\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\tTb11.02.4120\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3610\tTb927.2.3610\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1690\tTb927.3.1690\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2180\tTb927.3.2180\t\tGO:0005753\tPMID:194367139\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2880\tTb927.3.2880\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3450\tTb927.4.3450\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3090\tTb927.5.3090\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.840\tTb927.7.840\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170525\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3320\tTb927.8.3320\t\tGO:0005753\tPMID:19436713\tIDA\t\tC\tMitochondrial ATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170524\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4330\tTb927.10.4330\t\tGO:0005947\tGO_REF:0000012\tISA\tUniProtKB:P21953\tC\t2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005947", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7570\tPDH-E2\t\tGO:0005967\tGO_REF:0000012\tISA\tUniProtKB:P08461\tC\tdihydrolipoamide acetyltransferase E2 subunit, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005967", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12600\tTb927.11.12600\t\tGO:0006268\tGO_REF:0000011\tISM\tInterPro:IPR000212\tP\tATP-dependent DNA helicase, putative\tTb11.01.4440\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006268", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9170\tTb927.11.9170\t\tGO:0006268\tGO_REF:0000011\tISM\tInterPro:IPR000380\tP\tDNA topoisomerase III, putative\tTb11.01.0910\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006268", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9520\tTb927.11.9520\t\tGO:0006268\tGO_REF:0000011\tISM\tInterPro:IPR000380\tP\tDNA topoisomerase III, putative\tTb11.01.1280\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006268", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8890\tTb927.10.8890\t\tGO:0006323\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tP\tkinetoplast DNA-associated protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006323", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8950\tKAP4-1\t\tGO:0006323\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tP\tHMG box-containing protein 2 isoform 1, mitochondrial\tHMG2-1\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006323", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8970\tKAP4-2\t\tGO:0006323\tGO_REF:0000012\tISA\tUniProtKB:Q07053\tP\tHMG box-containing protein 2 isoform 2, mitochondrial\tmtHMG2-2\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006323", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16400\tKAP3\t\tGO:0006323\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511029.20\tP\tkinetoplast-associated protein 3, putative\tTb11.01.8090\tmRNA\ttaxon:185431\t20100908\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006323", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0006333\tGO_REF:0000012\tISA\tUniProtKB:Q9D0N7\tP\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006333", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6940\tTb927.9.6940\t\tGO:0006333\tPMID:15478803\tTAS\t\tP\tDNA topoisomerase type IB small subunit\tTb09.160.5070\tmRNA\ttaxon:185431\t20090429\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006333", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3140\tSIR2rp2\t\tGO:0006342\tGO_REF:0000011\tISM\tInterPro:IPR003000\tP\tSir2-related protein 2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006342", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6400\tHSP60\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006461", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6510\tHSP60\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\tchaperonin HSP60, mitochondrial precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006461", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15040\tHSP60\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:HSP60_SCHPO\tP\theat shock protein 60\tTb11.01.6680|Cpn60\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006461", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1670\tNFS\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:Q9Y697\tP\tcysteine desulfurase\tTb11.55.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006461", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4380\tSAM50\t\tGO:0006461\tPMID:20659504\tIDA\t\tP\tsorting assembly machinery 50 kDa subunit, putative\tTOB55\tmRNA\ttaxon:185431\t20100805\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006461", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.11840\tPNO1\t\tGO:0006461\tPMID:27965085\tIPI\tGeneDB:Tb927.11.10860\tP\tpre-rRNA-processing protein PNO1, putative\tTb09.211.2960\tmRNA\ttaxon:185431\t20170502\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006461", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12930\tSCLY\t\tGO:0006461\tGO_REF:0000012\tISA\tUniProtKB:Q9Y697\tP\tselenocysteine lyase\tTb09.211.3850|Tb927.9.12910\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006461", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13870\tTb927.10.13870\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004344\tP\ttubulin tyrosine ligase protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4460\tTb927.10.4460\t\tGO:0006464\tGO_REF:0000012\tISA\tUniProtKB:Q9UIC8\tP\tleucine carboxyl methyltransferase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5670\tNAT1\t\tGO:0006464\tPMID:11163439\tIC\tGO:0008080\tP\tN-acetyltransferase subunit Nat1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13940\tTb927.11.13940\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\tTb11.01.5510\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14200\tCDC34\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme CDC34\tTb11.01.5790\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14520\tTb927.11.14520\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000181\tP\tPolypeptide deformylase 1\tTb11.01.6120\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3310\tTb927.11.3310\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme, putative\tTb11.02.0815\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6810\tTTL\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004344\tP\ttubulin-tyrsoine ligase-like protein, putative\tTb11.02.4640\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9390\tTb927.11.9390\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004143\tP\tOctanoyltransferase, putative\tTb11.01.1160\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9920\tTb927.11.9920\t\tGO:0006464\tGO_REF:0000012\tISA\tUniProtKB:P14792\tP\tpolyubiquitin, putative\tTb11.01.1680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2460\tUBC9\t\tGO:0006464\tGO_REF:0000024\tISS\t\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3720\tTb927.2.3720\t\tGO:0006464\tGO_REF:0000024\tISS\t\tP\tubiquitin-conjugating enzyme, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2710\tTb927.4.2710\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3190\tTb927.4.3190\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3460\tTb927.4.3460\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1000\tTb927.5.1000\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2540\tTb927.7.2540\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6960\tTb927.7.6960\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tnon-canonical ubiquiting-conjugating enzyme 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6960\tTb927.7.6960\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tnon-canonical ubiquiting-conjugating enzyme 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2640\tUBA1a\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000127\tP\tubiquitin-activating enzyme E1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.550\tTb927.8.550\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR002569\tP\tpeptide methionine sulfoxide reductase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6090\tTb927.8.6090\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.630\tTb927.8.630\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004143\tP\tlipoate-protein ligase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6510\tUBC12\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.920\tPEX4\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12650\tUBA1b\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000127\tP\tubiquitin-activating enzyme E1, putative\tTb09.211.3610\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12780\tLCM1\t\tGO:0006464\tGO_REF:0000012\tISA\tUniProtKB:Q9UIC8\tP\tJumonji domain protein LCM1\tTb09.211.3730\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4620\tUBA3\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000127\tP\tubiquitin-activating enzyme E1, putative\tTb09.160.3210\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8000\tTb927.9.8000\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR000608\tP\tubiquitin-conjugating enzyme E2, putative\tTb09.211.0050\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9580\tTb927.9.9580\t\tGO:0006464\tGO_REF:0000011\tISM\tInterPro:IPR004344\tP\ttubulin tyrosine ligase protein, putative\tTb09.211.1170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006464", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4590\tTb927.10.4590\t\tGO:0006465\tGO_REF:0000024\tISS\t\tP\tmitochondrial inner membrane signal peptidase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006465", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2050\tTb927.8.2050\t\tGO:0006486\tGO_REF:0000012\tISA\tUniProtKB:P41940\tP\tGDP-mannose pyrophosphorylase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006486", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9200\tTb927.9.9200\t\tGO:0006490\tPMID:20382188\tIMP\t\tP\talpha-1,2-mannosyltransferase, putative\tTb09.211.0860\tmRNA\ttaxon:185431\t20100824\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006490", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3950\tALAT\t\tGO:0006524\tPMID:19443056\tIDA\t\tP\talanine aminotransferase\t\tmRNA\ttaxon:185431\t20090630\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006524", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4970\tGS\t\tGO:0006542\tGO_REF:0000002\tISM\tInterPro:IPR008147\tP\tglutamine synthetase, putative\tTb07.27E10.120\tmRNA\ttaxon:185431\t20130823\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006542", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1450\tTb927.11.1450\t\tGO:0006554\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.47.0004\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006554", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9980\tTb927.11.9980\t\tGO:0006554\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00239\tP\t2-oxoglutarate dehydrogenase E1 component, putative\tTb11.01.1740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006554", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11030\tATOM11\t\tGO:0006626\tPMID:25808593\tIDA\t\tP\tPresent in the outer mitochondrial membrane proteome 21\tPOMP21\tmRNA\ttaxon:185431\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0006626\tPMID:32105215\tIMP\t\tP\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20200722\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11460\tATOM69\t\tGO:0006626\tPMID:25808593\tIDA\t\tP\tPresent in the outer mitochondrial membrane proteome 9\tTb11.01.3290|POMP9\tmRNA\ttaxon:185431\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0006626\tPMID:18325611\tIMP\t\tP\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5600\tATOM14\t\tGO:0006626\tPMID:25808593\tIDA\t\tP\ttRNA import complex component, putative\tTb11.02.3310|POMP14\tmRNA\ttaxon:185431\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7780\tATOM46\t\tGO:0006626\tPMID:25808593\tIDA\t\tP\tPresent in the outer mitochondrial membrane proteome 16\tTb11.02.5660|POMP16\tmRNA\ttaxon:185431\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2470\tTIM54\t\tGO:0006626\tPMID:33084070\tIMP\t\tP\tMitochondrial import inner membrane translocase subunit 54\t\tmRNA\ttaxon:185431\t20210719\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4380\tATOM12\t\tGO:0006626\tPMID:25808593\tIDA\t\tP\tPresent in the outer mitochondrial membrane proteome 40\tPOMP40\tmRNA\ttaxon:185431\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6060\tERV1\t\tGO:0006626\tPMID:28366668\tIMP\t\tP\tPresent in the outer mitochondrial membrane proteome 4\tPOMP4|Tb09.160.4440\tmRNA\ttaxon:185431\t20200405\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4520\tMPPB\t\tGO:0006627\tGO_REF:0000012\tISA\tUniProtKB:P10507\tP\tmetallo-peptidase, Clan ME, Family M16\tTb09.160.3110|IL12.450\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006627", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1020\tSPT\t\tGO:0006643\tPMID:20382188\tEXP\t\tP\tserine-palmitoyl-CoA transferase, putative\t\tmRNA\ttaxon:185431\t20100712\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006643", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0006725\tGO_REF:0000011\tISM\tInterPro:IPR000733\tP\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006725", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1400\tTb927.9.1400\t\tGO:0006725\tGO_REF:0000011\tISM\tInterPro:IPR000733\tP\tNADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit, putative\tTb09.160.0390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006725", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6710\tTb927.9.6710\t\tGO:0006725\tGO_REF:0000011\tISM\tInterPro:IPR000733\tP\tflavoprotein monooxygenase, putative\tTb09.160.4910\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006725", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15130\tSEC22\t\tGO:0006903\tGO_REF:0000012\tISA\tUniProtKB:Q94AU2\tP\tVesicle-trafficking protein SEC22, putative\tSLY2\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006903", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13790\tTb927.10.13790\t\tGO:0007050\tPMID:30153427\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20181207\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0007050", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10380\tTb927.10.10380\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14550\tHEL67\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase HEL67\tVASA|DBP1\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1720\tTb927.10.1720\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3990\tDHH1\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDHH1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.540\tSUB2\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase SUB2, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6260\tTb927.10.6260\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6290\tTb927.10.6290\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6630\tDBP2A\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDEAD box protein 2A, putative\tHEL64\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7080\tTb927.10.7080\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7440\tMTR4\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase MTR4\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9780\tTb927.10.9780\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12110\tTb927.11.12110\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tRNA helicase, putative\tTb11.01.3930\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13810\tTb927.11.13810\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.5370\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14630\tTb927.11.14630\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DNA DEAD/DEAH box helicase, putative\tTb11.01.6260\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15460\tTb927.11.15460\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.7100\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16570\tTb927.11.16570\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.01.8290\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4980\tTb927.11.4980\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.2620\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7070\tTb927.11.7070\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb11.02.4920\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8770\tFAL1\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase FAL1, putative\tTb11.12.0011|EIF4A2|EIF4AIII\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8870\tMHEL61\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tTb11.01.0610|KREH1|REH1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.620\tTb927.3.620\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2630\tTb927.4.2630\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1560\tTb927.5.1560\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3600\tTb927.5.3600\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4270\tTb927.5.4270\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4420\tTb927.5.4420\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tnucleolar RNA helicase Gu, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3580\tTb927.6.3580\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H DNA helicase recQ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2970\tTb927.7.2970\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7300\tTb927.7.7300\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1510\tDBP2B\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent RNA helicase DBP2B, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3350\tTb927.8.3350\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tDNA polymerase theta (helicase domain only), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3830\tTb927.8.3830\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6690\tTb927.8.6690\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H DNA helicase recQ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.700\tTbPIF7\t\tGO:0008026\tPMID:19646907\tIC\t\tF\tDNA repair and recombination helicase protein PIF7\t\tmRNA\ttaxon:185431\t20110829\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10960\tTb927.9.10960\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb09.211.2300\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12510\tDED1\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\tATP-dependent DEAD/H RNA helicase, putative\tTb09.211.3510\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13610\tTb927.9.13610\t\tGO:0008026\tGO_REF:0000011\tISM\tInterPro:IPR001410\tF\thelicase, putative\tTb09.211.4430\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.4680\tEIF4A1\t\tGO:0008026\tPMID:15694484\tISA\t\tF\tEukaryotic initiation factor 4A-1\tTb09.160.3270\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008026", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15910\tGUP1\t\tGO:0008374\tPMID:18036137\tIDA\t\tF\tGlycerol uptake protein 1\t\tmRNA\ttaxon:185431\t20170720\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008374", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7510\tTb927.10.7510\t\tGO:0008536\tGO_REF:0000011\tISM\tInterPro:IPR000408\tF\tchromatin binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008536", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6780\tTb927.11.6780\t\tGO:0008536\tGO_REF:0000011\tISM\tInterPro:IPR000408\tF\tregulator of chromatin condensation, putative\tTb11.02.4610\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008536", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3370\tTb927.8.3370\t\tGO:0008536\tGO_REF:0000012\tISA\tUniProtKB:P47123\tF\tRan-binding protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008536", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2610\tTb927.8.2610\t\tGO:0009086\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01371\tP\t5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0009086", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.580\tTb927.1.580\t\tGO:0015114\tGO_REF:0000012\tISA\tUniProtKB:PHT21_ARATH\tF\tphosphate-repressible phosphate permease, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.600\tTb927.1.600\t\tGO:0015114\tGO_REF:0000012\tISA\tUniProtKB:PHT21_ARATH\tF\tphosphate-repressible phosphate permease, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015114", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1520\tAQP1\t\tGO:0015238\tGO_REF:0000002\tISO\tGeneDB:LmjF.31.0020|GeneDB:LmxM.30.0020\tF\tAquaglyceroporin 1\t\tmRNA\ttaxon:185431\t20131121\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015238", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11160\tPHO91\t\tGO:0015321\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508831.60\tF\tLow-affinity phosphate transporter PHO91 (fragment)\tTb11.01.2950\tmRNA\ttaxon:185431\t20160802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015321", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8440\tTHT1-\t\tGO:0015758\tPMID:8423781\tTAS\t\tP\tglucose transporter 1B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015758", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8450\tTHT1E\t\tGO:0015758\tPMID:8423781\tTAS\t\tP\tglucose transporter 1E\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015758", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0015991\tGO_REF:0000012\tISA\tUniProtKB:VATF_YEAST\tP\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015991", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.200\tTb927.10.200\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tP\tvacuolar ATP synthase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015991", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR00309\tP\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015991", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01040\tP\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015991", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tP\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015991", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2100\tTb927.8.2100\t\tGO:0015991\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01100\tP\tvacuolar ATP synthase 16 kDa proteolipid subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015991", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12500\tTb927.10.12500\t\tGO:0015992\tGO_REF:0000011\tISM\tInterPro:IPR000695\tP\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015992", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12510\tTb927.10.12510\t\tGO:0015992\tGO_REF:0000011\tISM\tInterPro:IPR000695\tP\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015992", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1570\tATPc2\t\tGO:0015992\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tP\tATPase subunit 9, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015992", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5280\tATPc1\t\tGO:0015992\tGO_REF:0000012\tISA\tUniProtKB:Q06055\tP\tATPase subunit 9, putative\tTb11.02.2950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015992", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1380\tATPB\t\tGO:0015992\tGO_REF:0000011\tISM\tInterPro:IPR000194\tP\tATP synthase subunit beta, mitochondrial\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015992", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0015992\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01104\tP\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015992", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420\tCPR\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tNADPH-cytochrome p450 reductase, putative\tNCDS.Tb927.11.7455\tmRNA\ttaxon:185431\t20100720\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb11.02.5420b\tTb11.02.5420b\t\tGO:0016021\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.5420\tC\tNADPH-cytochrome p450 reductase, putative\t\tmRNA\ttaxon:185431\t20130726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.05\tTb927.1.05\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.2040\tTb927.1.2040\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4870\tTb927.1.4870\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4890\tTb927.1.4890\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4900\tTb927.1.4900\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4910\tTb927.1.4910\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5080\tTb927.1.5080\t\tGO:0016021\tPMID:1672441\tTAS\t\tC\texpression site-associated gene 9 (ESAG9) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5100\tTb927.1.5100\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5110\tTb927.1.5110\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5120\tTb927.1.5120\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5170\tTb927.1.5170\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5200\tTb927.1.5200\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5220\tTb927.1.5220\t\tGO:0016021\tPMID:1672441\tTAS\t\tC\texpression site-associated gene 9 (ESAG9) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5240\tTb927.1.5240\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5300\tTb927.1.5300\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.5330\tTb927.1.5330\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10800\tTb927.10.10800\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10880\tABCF1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette sub-family F member 1, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11910\tTb927.10.11910\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR007114\tC\tmajor facilitator superfamily, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.11980\tTb927.10.11980\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9GU66_DROME\tC\tQA-SNARE protein putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13580\tTb927.10.13580\t\tGO:0016021\tGO_REF:0000002\tISM\tInterPro:IPR011701\tC\tmajor facilitator superfamily protein (MFS), putative\t\tmRNA\ttaxon:185431\t20140919\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.13830\tPAM27\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPresequence translocase-associated motor 27\tJ23\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15130\tSEC22\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:P22214\tC\tVesicle-trafficking protein SEC22, putative\tSLY2\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15530\tTb927.10.15530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transport system ATP-binding protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15850\tPEX12\t\tGO:0016021\tPMID:17188680\tIDA\t\tC\tperoxin 12\t\tmRNA\ttaxon:185431\t20110510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16160\tTb927.10.16160\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.16190\tACP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclic-enriched flagellar receptor adenylate cyclase 2\tGRESAG4\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2430\tTb927.10.2430\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3170\tGCN20\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGCN20-type ATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.4370\tTb927.10.4370\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.690\tTb927.10.690\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 3, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7140\tMBAP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmembrane-bound acid phosphatase 2\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7180\tCRAM\t\tGO:0016021\tPMID:1697030\tTAS\t\tC\tcysteine-rich, acidic integral membrane protein precursor\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7360\tTb927.10.7360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7700\tABCG\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tATP-binding cassette protein subfamily G\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.790\tTb927.10.790\t\tGO:0016021\tGO_REF:0000024\tISS\t\tC\tvesicle-associated membrane protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8440\tTHT1-\t\tGO:0016021\tPMID:8423781\tTAS\t\tC\tglucose transporter 1B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8450\tTHT1E\t\tGO:0016021\tPMID:8423781\tTAS\t\tC\tglucose transporter 1E\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8530\tTHT2A\t\tGO:0016021\tPMID:8423781\tTAS\t\tC\tglucose transporter 2A\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9300\tTb927.10.9300\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR004254\tC\tadiponectin receptor protein 1\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9310\tTb927.10.9310\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR004254\tC\tHaemolysin-III related, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9470\tTb927.10.9470\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9480\tTb927.10.9480\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9490\tTb927.10.9490\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 3 (ESAG3)-like protein\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9500\tTb927.10.9500\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.100\tTb927.11.100\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.51.0005\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10020\tTb927.11.10020\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tshort-chain dehydrogenase, putative\tTb11.01.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1010\tJ18\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb11.03.0110\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10450\tTb927.11.10450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative\tTb11.01.2220\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1070\tgat3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglycosomal transporter (GAT3), putative\tTb11.03.0030\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10980\tTb927.11.10980\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGot1/Sft2-like family, putative\tTb11.01.2770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11720\tTb927.11.11720\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFG-GAP repeat protein, putative\tTb11.01.3590\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12080\tGPI12\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tN-acetyl-D-glucosaminylphosphatidylinositol de-N-acetylase\tTb11.01.3900\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12270\tTb927.11.12270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tdrug resistence protein, putative\tTb11.01.4090\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12650\tTb927.11.12650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 5, putative\tTb11.01.4490\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1300\tTb927.11.1300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUBA/TS-N domain containing protein, putative\tTb11.47.0019\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13000\tTb927.11.13000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphospholipid-transporting ATPase, putative\tTb11.52.0018\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13130\tMBAP1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmembrane-bound acid phosphatase 1 precursor\tTb11.01.4701\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13580\tTb927.11.13580\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tubiquinone biosynthesis protein-like protein\tTb11.01.5180\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13600\tJ60\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.01.5190\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13650\tCYB5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcytochrome b5, putative\tTb11.01.5225\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13740\tACP5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tgene related to expression site-associated gene 4 protein (GRESAG4)\tTb11.01.5310|GRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13830\tJ63\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.01.5390\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.140\tTb927.11.140\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\texpression site-associated gene 4 (ESAG4) protein, putative\tTb11.03.0990\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20140218\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14070\tRDK1\t\tGO:0016021\tGO_REF:0000002\tISS\t\tC\tRepressor of differentiation kinase 1\tTb11.01.5650\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14360\tMCP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.01.5960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14620\tTb927.11.14620\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\tTb11.01.6230|NCDS.Tb927.11.14611\tmRNA\ttaxon:185431\t20090310\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1470\tTb927.11.1470\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t65 kDa invariant surface glycoprotein-like protein\tTb11.47.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14730\tFtsH14\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tMetalloprotease M41 FtsH, putative\tTb11.01.6360\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1480\tTb927.11.1480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.27.0001\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14910\tTb927.11.14910\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein phosphatase 2C, putative\tTb11.01.6540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.150\tTb927.11.150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.03.0970\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15150\tTb927.11.15150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t1-acyl-sn-glycerol-3-phosphate acyltransferase, putative\tTb11.01.6800\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1520\tTb927.11.1520\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 3 (ESAG3) protein, putative\tTb11.55.0028\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1530\tTb927.11.1530\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 3 (ESAG3) protein, putative\tTb11.55.0027\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15330\tTb927.11.15330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphatidylinositol 3-kinase catalytic subunit, putative\tTb11.01.6980\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15530\tTb927.11.15530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tC-14 sterol reductase, putative\tTb11.01.7170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15760\tTTA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tGPI transamidase subunit Tta1\tTb11.01.7400\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15840\tTb927.11.15840\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tL-Lysine transport protein, putative\tTb11.01.7500\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15860\tTb927.11.15860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tL-Lysine transport protein, putative\tTb11.01.7520\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15920\tTb927.11.15920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglutathione peroxidase, putative\tTb11.01.7560\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15950\tTb927.11.15950\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\tTb11.01.7590\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15960\tTb927.11.15960\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\tTb11.01.7600\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16110\tTb927.11.16110\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tintegrin alpha chain protein, putative\tTb11.01.7770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16240\tTb927.11.16240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\tTb11.01.7920\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16560\tNST2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tCMP-sialic acid transporter, putative\tTb11.01.8280\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16630\tTb927.11.16630\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmajor facilitator superfamily, putative\tTb11.01.8350\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16930\tABCB7\t\tGO:0016021\tPMID:11152613|GO_REF:0000011\tISM\tInterPro:IPR001140\tC\tABC transporter of the mitochondrion, putative\tTb11.01.8700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17190\tTb927.11.17190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0035\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17320\tTb927.11.17320\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0024\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17370\tTb927.11.17370\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0019\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17580\tTb927.11.17580\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.21.0004\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17720\tTb927.11.17720\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.24.0007\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17770\tTb927.11.17770\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.24.0012\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.17890\tTb927.11.17890\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene 1 (ESAG1) protein, putative\tTb11.17.0002\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1910\tTb927.11.1910\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter protein, putative\tTb11.42.0002\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19520\tTb927.11.19520\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.57.0084\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19540\tTb927.11.19540\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.57.0052\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19620\tTb927.11.19620\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, pseudogene), putative\tTb11.32.0002\tpseudogenic_transcript\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.19870\tTb927.11.19870\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.35.0001\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20090\tTb927.11.20090\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0007\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20100\tTb927.11.20100\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0008\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20190\tTb927.11.20190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.14.0015\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20240\tTb927.11.20240\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.14.0019\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20550\tTb927.11.20550\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb11.09.0003\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20700\tTb927.11.20700\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb11.38.0005\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.20730\tTb927.11.20730\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tglycerophosphoryl diester phosphodiesterase, putative\tTb11.01.0580\tmRNA\ttaxon:185431\t20120524\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2210\tTb927.11.2210\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tdiacylglycerol acyltransferase, putative\tTb11.18.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2230\tCAT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcarnitine O-acetyltransferase, putative\tTb11.18.0006\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2330\tTb927.11.2330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmolybdopterin synthase sulphurylase protein, putative\tTb11.22.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2380\tPGKL\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphoglycerate kinase, putative\tTb11.22.0003\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3030\tPRS\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphoribosylpyrophosphate synthetase, putative\tTb11.02.0530\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3130\tGAT2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglycosomal transporter (GAT2)\tTb11.02.0630\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3270\tSQE\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tsqualene monooxygenase, putative\tTb11.02.0780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3350\tTb927.11.3350\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphospholipid-transporting ATPase 1-like protein, putative\tTb11.02.0850\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3470\tTb927.11.3470\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tendosomal integral membrane protein, putative\tTb11.02.0960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3620\tNT8.2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tnucleobase/nucleoside transporter 8.2\tTb11.02.1105|NBT2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3630\tNT8.3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tnucleobase/nucleoside transporter 8.3\tTb11.02.1106|NBT3\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3750\tB5R\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNADH-cytochrome b5 reductase, putative\tTb11.02.1230\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4200\tTb927.11.4200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmannose-specific lectin, putative\tTb11.02.1680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4220\tPAT6\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 6, putative\tTb11.02.1710\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.440\tTb927.11.440\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tconserved protein\tTb11.03.0700\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4430\tFR1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tferric reductase transmembrane protein, putative\tTb11.02.1990\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.4850\tTb927.11.4850\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.2460\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5290\tMCP9\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\tTb11.02.2960\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5350\tHMIT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmyo-inositol/proton symporter (MIT)\tTb11.02.3020\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.540\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tTb11.03.0540\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.570\tTb927.11.570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tDnaJ domain containing protein, putative\tTb11.03.0510\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5710\tJ29\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb11.02.3430\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5940\tTb927.11.5940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb11.02.3740\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6040\tTb927.11.6040\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNodulin-like, putative\tTb11.02.3860\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6120\tTb927.11.6120\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\tTb11.02.3950\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6220\tPAT7\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPalmitoyl acyltransferase 7\tTb11.02.4090\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6230\tTb927.11.6230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein transport protein SEC61 subunit alpha, putative\tTb11.02.4100\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6570\tTb927.11.6570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNodulin-like, putative\tTb11.02.4420\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6640\tCYB5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcytochrome b5, putative\tTb11.02.4485\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.6680\tTb927.11.6680\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid permease/transporter, putative\tTb11.02.4520\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7000\tTb927.11.7000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.4850\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7230\tTb927.11.7230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 8, putative\tTb11.02.5140\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7300\tTb927.11.7300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmajor facilitator superfamily, putative\tTb11.02.5200\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7360\tTb927.11.7360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 9, putative\tTb11.02.5260\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7490\tTb927.11.7490\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.02.5480\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7500\tTb927.11.7500\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.02.5490\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7800\tTb927.11.7800\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\tTb11.02.5680\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8060\tTb927.11.8060\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSNARE associated Golgi protein, putative\tTb11.01.0480\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8380\tCPR\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tNADPH--cytochrome P450 reductase, putative\tTb11.01.0170\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8740\tTb927.11.8740\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein of unknown function (DUF423), putative\tTb11.12.0008\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8790\tTb927.11.8790\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttarget SNARE, putative\tTb11.12.0013\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8820\tTb927.11.8820\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tglutathionylspermidine synthetase, putative\tTb11.12.0016\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8940\tLDK\t\tGO:0016021\tPMID:20833891\tIDA\t\tC\tprotein lipid droplet kinase (LDK)\tTb11.01.0670\tmRNA\ttaxon:185431\t20100920\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9000\tTb927.11.9000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0725\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9010\tTb927.11.9010\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0730\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9020\tTb927.11.9020\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0760\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9030\tTb927.11.9030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation transporter, putative\tTb11.01.0770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9070\tPAT4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 4, putative\tTb11.01.0810\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9360\tTb927.11.9360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprenyltransferase, putative\tTb11.01.1130\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2720\tFlaK\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE/STE7 protein kinase, putative\tMEKK1\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.3370\tTb927.2.3370\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4760\tTb927.2.4760\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4830\tTb927.2.4830\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4920\tTb927.2.4920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5290\tTb927.2.5290\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5300\tTb927.2.5300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5310\tTb927.2.5310\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5320\tTb927.2.5320\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5330\tTb927.2.5330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5340\tTb927.2.5340\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5350\tTb927.2.5350\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5360\tTb927.2.5360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5410\tTb927.2.5410\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter family-like protein\t1F7.75\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6130\tTb927.2.6130\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6150\tTbNT2/927\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6200\tTbNT3\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6220\tTbNT4\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6240\tTbNT5\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6280\tTbNT7\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6320\tTbNT6\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6410\tTb927.2.6410\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.150\tTb927.3.150\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1500\tTb927.3.1500\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1510\tTb927.3.1510\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1630\tCK1\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9U8F8_TRYCR\tC\tcasein kinase 1, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.180\tTb927.3.180\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.190\tTb927.3.190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.210\tTb927.3.210\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2400\tTb927.3.2400\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 10, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2610\tGPIdeAc2\t\tGO:0016021\tPMID:16510441\tISM\t\tC\tGPI inositol deacylase 2\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.2820\tTb927.3.2820\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tTFIIF-stimulated CTD phosphatase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.340\tTb927.3.340\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.370\tTb927.3.370\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3730\tTb927.3.3730\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4220\tTb927.3.4220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tZn-finger domain protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.440\tTb927.3.440\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.490\tTb927.3.490\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4920\tTb927.3.4920\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507951.270\tC\tLETM1 and EF-hand domain-containing protein 1, putative\t\tmRNA\ttaxon:185431\t20120524\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5650\tTb927.3.5650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE group serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.5660\tGnTI\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-GlcNAc:alpha3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I\tGT11\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.590\tAT-E\t\tGO:0016021\tPMID:10398598\tTAS\t\tC\tadenosine transporter, putative\tNT12\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.710\tTb927.3.710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2500\tEIF2AK2\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9NIV1\tC\teukaryotic translation initiation factor 2-alpha kinase 2\tK2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0016021\tPMID:11152613|GO_REF:0000024\tISS\tUniProtKB:MRP1_MOUSE\tC\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2510\tMRPA\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tp-glycoprotein\tPGPA\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3190\tTb927.4.3190\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3750\tTb927.4.3750\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3860\tTb927.4.3860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3870\tTb927.4.3870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3880\tTb927.4.3880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3930\tTb927.4.3930\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4020\tAAT2-4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tOrnithine/histidine transporter AAT2-4\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4250\tTb927.4.4250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4270\tTb927.4.4270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4290\tTb927.4.4290\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4410\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4430\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4440\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4450\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4460\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4470\tGRESAG 4.4\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tadenylyl cyclase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4490\tMRPE\t\tGO:0016021\tGO_REF:0000011\tISM\tPfam:PF00664\tC\tmultidrug resistance protein E\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4830\tTb927.4.4830\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4850\tTb927.4.4850\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4870\tTb927.4.4870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4880\tTb927.4.4880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5240\tTb927.4.5240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5250\tTb927.4.5250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5260\tTb927.4.5260\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5270\tTb927.4.5270\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5290\tTb927.4.5290\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5400\tTb927.4.5400\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5410\tTb927.4.5410\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5420\tTb927.4.5420\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5430\tTb927.4.5430\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5460\tTb927.4.5460\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5530\tTb927.4.5530\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5560\tTb927.4.5560\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5580\tTb927.4.5580\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5700\tTb927.4.5700\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.650\tJ19\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1450\tTb927.5.1450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.230\tTb927.5.230\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2760\tTb927.5.2760\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3150\tTb927.5.3150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprotein kinase , putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.320\tTb927.5.320\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb927.5.320b\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.330\tTb927.5.330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\tTb927.5.330b\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3320\tTb927.5.3320\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPseudokinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3880\tTb927.5.3880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4540\tTb927.5.4540\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4550\tTb927.5.4550\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4670\tTb927.5.4670\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4690\tTb927.5.4690\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4730\tTb927.5.4730\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4770\tTb927.5.4770\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4810\tTb927.5.4810\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4840\tTb927.5.4840\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4950\tTb927.5.4950\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.5050\tTb927.5.5050\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.5080\tTb927.5.5080\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.520\tTb927.5.520\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR001107\tC\tstomatin-like protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.5240\tTb927.5.5240\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.650\tTb927.5.650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.170\tTb927.6.170\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.180\tTb927.6.180\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q99279\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.190\tTb927.6.190\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.200\tTb927.6.200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.220\tTbNT9\t\tGO:0016021\tPMID:10514517\tIDA\t\tC\tpurine nucleoside transporter\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2710\tTb927.6.2710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tE3 ubiquitin-protein ligase HEL2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.280\tTb927.6.280\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2810\tTb927.6.2810\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.300\tTb927.6.300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.310\tTb927.6.310\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.330\tTb927.6.330\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.370\tTb927.6.370\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3730\tJ38\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.380\tTb927.6.380\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.430\tTb927.6.430\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.450\tTb927.6.450\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tEP3-2 procyclin\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.460\tPAG3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin associated gene 3 (PAG3) protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.480\tTb927.6.480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tEP3-2 procyclin\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.490\tPAG3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin associated gene 3 (PAG3) protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.510\tGPEET\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin A-alpha\tparpA-alpha\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.520\tEP3-2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tsurface protein EP3-3 procyclin precursor\tparpA-beta\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5240\tTb927.6.5240\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5260\tTb927.6.5260\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.530\tPAG3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tprocyclin associated gene 3 (PAG3) protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5370\tTb927.6.5370\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5450\tTb927.6.5450\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5550\tTb927.6.5550\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5740\tTb927.6.5740\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.760\tTb927.6.760\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.770\tTb927.6.770\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.780\tTb927.6.780\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.790\tTb927.6.790\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.800\tTb927.6.800\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.100\tTb927.7.100\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative (fragment)\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2230\tTb927.7.2230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3350\tPAT11\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 11, putative\t\tmRNA\ttaxon:185431\t20110802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5220\tTb927.7.5220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tForkhead Kinase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5230\tTb927.7.5230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tlanosterol synthase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6040\tTb927.7.6040\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6050\tTb927.7.6050\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6060\tTb927.7.6060\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6070\tTb927.7.6070\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6080\tTb927.7.6080\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6200\tJ26\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6500\tTb927.7.6500\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6540\tTb927.7.6540\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6660\tJ10\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.740\tJ28\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7470\tACP3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tgene related to expression site-associated gene 4 protein (GRESAG4)\tGRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7520\tTb927.7.7520\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7530\tTb927.7.7530\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1030\tTb927.8.1030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1160\tTb927.8.1160\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tvacuolar-type Ca2+-ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1180\tTbA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tvacuolar-type Ca2+-ATPase 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.130\tTb927.8.130\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1310\tMCP15\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1650\tTb927.8.1650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tProtein Associated with Differentiation, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.170\tTb927.8.170\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1810\tTb927.8.1810\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\trhomboid-like protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1940\tTb927.8.1940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tendosomal integral membrane protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.200\tTb927.8.200\t\tGO:0016021\tPMID:11152613\tISS\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase (pseudogene), putative\t\tpseudogenic_transcript\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2100\tTb927.8.2100\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tvacuolar ATP synthase 16 kDa proteolipid subunit, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2160\tPGPA\t\tGO:0016021\tGO_REF:0000011\tISM\tInterPro:IPR001140\tC\tmultidrug resistance protein A\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2200\tTb927.8.2200\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tterbinafine resistance locus protein (yip1), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2380\tABCG5\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2480\tTb927.8.2480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\t3-oxo-5-alpha-steroid 4-dehydrogenase-like, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2520\tACS\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tacetyl-CoA synthetase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3240\tTb927.8.3240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tlathosterol oxidase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3330\tMCP18\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3400\tTb927.8.3400\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 12, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3620\tFT1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tfolate transporter 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3630\tFT2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tfolate transporter 2\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3650\tFT3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFolate transporter 3\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3880\tTb927.8.3880\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3890\tTb927.8.3890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.3900\tTb927.8.3900\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4010\tFLA1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFlagellum adhesion protein 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4050\tFLA1BP-2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFLA1-binding protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4060\tFLA2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFlagellum adhesion protein 2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4100\tFLA1BP-1\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFLA1-binding protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4110\tFLA3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tFlagellum adhesion protein 3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4440\tMCP19\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.460\tTb927.8.460\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4600\tTb927.8.4600\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tZinc finger, C3HC4 type (RING finger), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4610\tRABX1\t\tGO:0016021\tPMID:9099693\tIDA\t\tC\tRas-related protein RabX1\tRAB2A\tmRNA\ttaxon:185431\t20140528\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4700\tAATP6\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.480\tTb927.8.480\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tphosphatidic acid phosphatase protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.4890\tTb927.8.4890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpol-associated gene 1\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5030\tTb927.8.5030\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttrafficking protein particle complex subunit 3, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5420\tTb927.8.5420\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmethyltransferase domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0016021\tGO_REF:0000002\tISO\tGeneDB:LinJ.10.0760\tC\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20110223\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5570\tTb927.8.5570\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\ttransporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.560\tTb927.8.560\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5810\tMCP24\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmitochondrial carrier protein\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6000\tTb927.8.6000\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tfatty acid desaturase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6410\tKAR3\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tshort-chain dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.650\tTb927.8.650\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcation-transporting ATPase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6620\tTb927.8.6620\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7140\tTb927.8.7140\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7150\tTb927.8.7150\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7300\tTb927.8.7300\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7320\tTb927.8.7320\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7410\tTb927.8.7410\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcalreticulin, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7460\tTb927.8.7460\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tmetal-ion transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7560\tTb927.8.7560\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tCorA-like Mg2+ transporter protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7580\tTb927.8.7580\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tRING-variant domain containing protein, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7590\tTb927.8.7590\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7680:mRNA\tTb927.8.7680\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7700:mRNA\tTb927.8.7700\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7710:mRNA\tTb927.8.7710\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7720:mRNA\tTb927.8.7720\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7860:mRNA\tTb927.8.7860\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7870:mRNA\tTb927.8.7870\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7890:mRNA\tTb927.8.7890\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7900:mRNA\tTb927.8.7900\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7920:mRNA\tTb927.8.7920\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7930:mRNA\tTb927.8.7930\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7940:mRNA\tTb927.8.7940\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.7980:mRNA\tVP2\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPyrophosphate-energized vacuolar membrane proton pump 2, putative\tPPase2\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8090:mRNA\tTb927.8.8090\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8100:mRNA\tTb927.8.8100\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8220:mRNA\tTb927.8.8220\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8230:mRNA\tTb927.8.8230\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8240:mRNA\tTb927.8.8240\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8250:mRNA\tTb927.8.8250\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8260:mRNA\tTb927.8.8260\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8300:mRNA\tTb927.8.8300\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tamino acid transporter, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8360:mRNA\tTb927.8.8360\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\treceptor-type adenylate cyclase GRESAG 4, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10010\tJ34\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb09.211.1550\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1050\tTb927.9.1050\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.160.0110\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1110\tTb927.9.1110\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.160.0160\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12400\tTb927.9.12400\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE/STE11 serine/threonine-protein kinase, putative\tTb09.211.3410\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1250\tTb927.9.1250\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.160.0260\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1280\tTb927.9.1280\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.160.0280\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13030\tTb927.9.13030\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9GU66_DROME\tC\tQA-SNARE protein putative\tTb09.211.3920\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14420\tPPIase\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tPeptidyl-prolyl cis-trans isomerase C, mitochondrial, putative\tTb09.211.4880\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15460\tTb927.9.15460\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tcalcium motive p-type ATPase, putative\tTb09.244.2570\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15660\tACP6\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q26721\tC\tprocyclic-enriched flagellar receptor adenylate cyclase 6\tTb09.244.2380|GRESAG4\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15700\tTb927.9.15700\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2330|NCDS.Tb927.9.15705\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15710\tTb927.9.15710\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2310|NCDS.Tb927.9.15715\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15730\tTb927.9.15730\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2280|NCDS.Tb927.9.15735\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15760\tTb927.9.15760\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2240\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15790\tTb927.9.15790\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG)-related, putative\tTb09.244.2200|NCDS.Tb927.9.15795|Tb927.9.15795\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15940\tTb927.9.15940\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein, putative\tTb09.244.2060\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.160\tTb927.9.160\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.354.0060\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16200\tTb927.9.16200\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.1830\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16320\tTb927.9.16320\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.244.1740\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16460\tTb927.9.16460\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.1600\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16490\tTb927.9.16490\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.244.1580\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16500\tTb927.9.16500\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.1570\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.16640\tTb927.9.16640\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.244.1410\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.17050\tTb927.9.17050\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.1000\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.17140\tTb927.9.17140\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.244.0910\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.17850\tTb927.9.17850\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.0250\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.17910\tTb927.9.17910\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.0200\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.18050\tTb927.9.18050\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.244.0050\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.190\tTb927.9.190\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.354.0090\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.2050\tTb927.9.2050\t\tGO:0016021\tGO_REF:0000011\tISM\tPfam:PF04893\tC\tmembrane protein YIP1, putative\tTb09.160.0840\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.270\tTb927.9.270\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.354.0180\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.3120\tTb927.9.3120\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tSTE/STE11 serine/threonine-protein kinase, putative\tTb09.160.1780\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.440\tTb927.9.440\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.142.0100\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.570\tTb927.9.570\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, atypical), putative\tTb09.142.0230\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.580\tTb927.9.580\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG), putative\tTb09.142.0240\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6310\tTb927.9.6310\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, putative\tTb09.160.4600\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.660\tTb927.9.660\t\tGO:0016021\tPMID:8892306\tTAS\t\tC\texpression site-associated gene (ESAG) protein\tTb09.142.0310\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7320\tTb927.9.7320\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\tTb09.160.5380\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7330\tTb927.9.7330\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\tTb09.160.5390\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7400\tTb927.9.7400\t\tGO:0016021\tPMID:11087933\tTAS\t\tC\texpression site-associated gene 11 (ESAG11) protein, putative\tTb09.v1.0310\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7410\tTb927.9.7410\t\tGO:0016021\tPMID:2720787\tTAS\t\tC\texpression site-associated gene 2 (ESAG2) protein, putative\tTb09.v1.0320\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7470\tNT10\t\tGO:0016021\tPMID:15478805\tIDA\t\tC\tpurine nucleoside transporter\tTb09.160.5480\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7700\tTb927.9.7700\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tpalmitoyl acyltransferase 1, putative\tTb09.160.5650\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8160\tJ11\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tchaperone protein DnaJ, putative\tTb09.211.0140\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.940\tTb927.9.940\t\tGO:0016021\tPMID:6811137\tTAS\t\tC\tvariant surface glycoprotein (VSG, pseudogene), putative\tTb09.160.0010\tpseudogenic_transcript\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10850\tAGO1\t\tGO:0016246\tPMID:14670085\tIMP\t\tP\tProtein argonaute-1\tAGO\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016246", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8880\tRIF4\t\tGO:0016246\tPMID:22654659\tIMP\t\tP\tRNA interference factor 4\t\tmRNA\ttaxon:185431\t20171009\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016246", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1620\tPIPKA\t\tGO:0016307\tPMID:24639465\tIMP\t\tF\tphosphatidylinositol phosphate kinase alpha\tPIP5KII-alpha\tmRNA\ttaxon:185431\t20150618\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016307", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4490\tNAT2\t\tGO:0016401\tGO_REF:0000011\tISM\tPfam:PF00583\tF\tN-acetyltransferase 2, putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016401", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14040\tTb927.10.14040\t\tGO:0016820\tGO_REF:0000011\tISM\tInterPro:IPR004907\tF\tvacuolar ATP synthase subunit c, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016820", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12170\tTb927.10.12170\t\tGO:0017137\tGO_REF:0000011\tISM\tPfam:PF03208\tF\tRAB-interacting protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0017137", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12190\tTb927.10.12190\t\tGO:0017137\tGO_REF:0000011\tISM\tPfam:PF03208\tF\tRAB-interacting protein, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0017137", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6430\tTb927.9.6430\t\tGO:0017137\tGO_REF:0000002\tISS\t\tF\tRab geranylgeranyl transferase component A, putative\tTb09.160.4680\tmRNA\ttaxon:185431\t20100715\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0017137", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7230\tNTR\t\tGO:0017144\tPMID:20028822\tIDA\t\tP\tNADH dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20100611\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0017144", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.470\tTb927.10.470\t\tGO:0019285\tGO_REF:0000012\tISA\tUniProtKB:Q8CMY2\tP\tcholine dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0019285", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5920\tMST\t\tGO:0019343\tPMID:12419809\tISO\tGeneDB:LmjF.05.0970\tP\tmercaptopyruvate sulfurtransferase, putative\t\tmRNA\ttaxon:185431\t20091009\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0019343", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1840\tTb927.3.1840\t\tGO:0019408\tPMID:20637498\tISS\t\tP\t3-oxo-5-alpha-steroid 4-dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20100922\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0019408", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3660\tcASAT\t\tGO:0019509\tPMID:11443076\tIDA\t\tP\taspartate aminotransferase\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0019509", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5090\tmASAT\t\tGO:0019509\tPMID:11443076\tIDA\t\tP\taspartate aminotransferase, mitochondrial\tTb11.02.2740\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0019509", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.1980\tTb927.1.1980\t\tGO:0030173\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\t\tmRNA\ttaxon:185431\t20140812\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030173", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.220\tCDS\t\tGO:0030173\tPMID:24533860\tIDA\t\tC\tCDP-DAG synthase\t\tmRNA\ttaxon:185431\t20140805\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030173", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4530\tELO4\t\tGO:0030176\tPMID:20382188\tEXP\t\tC\tLong chain fatty acyl elongase\t\tmRNA\ttaxon:185431\t20100726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1820\tTb927.6.1820\t\tGO:0030176\tGO_REF:0000012\tISA\tUniProtKB:CAX4_YEAST\tC\tdolichyl pyrophosphate phosphatase, putative\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4160\tELO3\t\tGO:0030176\tGO_REF:0000011\tISM\tPfam:PF01151\tC\tFatty acid elongase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4170\tELO2\t\tGO:0030176\tGO_REF:0000011\tISM\tPfam:PF01151\tC\tFatty acid elongase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4180\tELO1\t\tGO:0030176\tGO_REF:0000011\tISM\tPfam:PF01151\tC\tFatty acid elongase\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12790\tTb927.9.12790\t\tGO:0030176\tGO_REF:0000012\tISA\tUniProtKB:DOLK_HUMAN\tC\tdolichol kinase, putative\tTb09.211.3740\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3690\tCFIIm\t\tGO:0030423\tGO_REF:0000012\tISO\tUniProtKB:CLP1_HUMAN\tP\tpre-mRNA cleavage complex II Clp1-like, conserved\t\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030423", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5260\tHRD1\t\tGO:0030433\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST|UniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tTb09.160.3780\tmRNA\ttaxon:185431\t20130910\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14150\tERBP1\t\tGO:0030529\tGO_REF:0000012\tISA\tUniProtKB:BFR1_YEAST\tC\tEnigmRBP1\t\tmRNA\ttaxon:185431\t20130911\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030529", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15380\tTb927.10.15380\t\tGO:0030529\tGO_REF:0000011\tISM\tInterPro:IPR007144\tC\tU3 snoRNA-associated protein UTP11, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030529", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.720\tZFP3\t\tGO:0030529\tPMID:19247446\tIDA\t\tC\tzinc finger protein 3\t\tmRNA\ttaxon:185431\t20090715\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030529", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.8740\tDRBD3\t\tGO:0030529\tPMID:18611951\tIDA\t\tC\tDouble RNA binding domain protein 3\tTb09.211.0560|PTB1\tmRNA\ttaxon:185431\t20090831\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030529", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.13290\tTIM17\t\tGO:0031305\tPMID:18325611\tIDA\t\tC\tmitochondrial import inner membrane translocase subunit tim17\tTb11.01.4870\tmRNA\ttaxon:185431\t20090805\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031305", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1350\tMCU\t\tGO:0031305\tGO_REF:0000012\tISA\tUniProtKB:MCU_HUMAN\tC\tcalcium uniporter protein, mitochondrial\tTb11.47.0014\tmRNA\ttaxon:185431\t20140717\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031305", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2510\tVDAC1\t\tGO:0031307\tPMID:19617393\tIDA\t\tC\tvoltage-dependent anion-selective channel 1\tPorin1\tmRNA\ttaxon:185431\t20101007\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031307", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.2520\tVDAC2\t\tGO:0031307\tPMID:19617393\tIDA\t\tC\tvoltage-dependent anion-selective channel 2\tPorin2\tmRNA\ttaxon:185431\t20101007\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031307", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.9660\tATOM40\t\tGO:0031307\tPMID:22000100\tIDA\t\tC\tArchaic translocase outer mitochondrial membrane 40\tTb09.211.1240\tmRNA\ttaxon:185431\t20150326\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031307", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5170\tTb927.9.5170\t\tGO:0031388\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tTb09.160.3690\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031388", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7050\tCAF1B\t\tGO:0031497\tGO_REF:0000002\tISS\t\tP\tChromatin assembly factor 1 subunit B\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031497", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14320\tFAZ9\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tArmadillo/beta-catenin-like repeat, putative\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1450\tCAAP1\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tCentrin arm-associated protein 1\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15750\tp197\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tTripartite attachment complex protein 197\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2860\tPOC1\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tPOC1 centriolar protein homolog\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3010\tTb927.10.3010\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3930\tTb927.10.3930\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein S3A, putative\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5330\tTb927.10.5330\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5340\tRPS18\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein S18, putative\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.850\tTb927.10.850\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8940\tKH1\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tflagellum targeting protein kharon1, putative\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9160\tCYC12\t\tGO:0032403\tPMID:26954683\tIPI\tGeneDB:Tb927.3.4170|GeneDB:Tb927.2.4510\tF\tCyclin 12, L-type\t\tmRNA\ttaxon:185431\t20160704\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10790\tTb927.11.10790\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein SA, putative\tTb11.01.2560\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11560\tTOP2B\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\tDNA topoisomerase II beta, putative\tTb11.01.3390|Tb927.11.11540\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.15140\tCAP62\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tCytoskeleton-associated protein 62 kDa\tTb11.01.6790\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16310\tMYO13\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\tUnconventional myosin\tTb11.01.7990\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2050\tTb927.11.2050\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t60S acidic ribosomal protein P0, putative\tTb11.46.0002\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2590\tFAZ12\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tFlagellum attachment zone protein 12\tTb11.02.0190\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3510\tTb927.11.3510\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\thypothetical protein, conserved\tTb11.02.1000\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3590\tTb927.11.3590\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t40S ribosomal protein S4, putative\tTb11.02.1085\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4510\tCRK9\t\tGO:0032403\tPMID:26954683\tIPI\tGeneDB:Tb927.10.9160|GeneDB:Tb927.3.4170\tF\tcdc2-related kinase 9\t\tmRNA\ttaxon:185431\t20160706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.5160\tJ2\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\tChaperone protein DnaJ 2\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1020\tFAZ13\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tFlagellum attachment zone protein 13\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4170\tCRK9AP\t\tGO:0032403\tPMID:26954683\tIPI\tGeneDB:Tb927.2.4510|GeneDB:Tb927.10.9160\tF\tCRK9-associated protein\t\tmRNA\ttaxon:185431\t20160704\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2040\tALBA3\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\tDNA/RNA-binding protein Alba 3\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2640\tTb927.4.2640\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3340\tTb927.4.3340\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5340\tFAZ11\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tFlagellum attachment zone protein 11\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1110\tTb927.5.1110\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t60S ribosomal protein L8, putative\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.4340\tBBP65\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tbasal body component, putative\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.830\tTAC65\t\tGO:0032403\tPMID:27436903\tIPI\tGeneDB:Tb927.7.5700\tF\tTripartite attachment complex protein 65\t\tmRNA\ttaxon:185431\t20160725\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1160\tTb927.6.1160\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\tleucine-rich repeat protein (LRRP), putative\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3480\tDRBD5\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\tRNA-binding protein, putative\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4280\tGAPDH\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\tglyceraldehyde 3-phosphate dehydrogenase, glycosomal\t\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.2640\tCAP51\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tCytoskeleton associated protein 51\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3330\tFAZ10\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tFlagellar attachment zone protein 10\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3550\tWCB\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tcytoskeleton associated protein, putative\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7000\tTb927.7.7000\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\thook complex protein, conserved\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6370\tFPC4\t\tGO:0032403\tPMID:29091964\tIPI\tGeneDB:Tb927.11.12150\tF\tcytoskeleton associated protein, putative\t\tmRNA\ttaxon:185431\t20171220\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6370\tFPC4\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tcytoskeleton associated protein, putative\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6980\tFAZ14\t\tGO:0032403\tPMID:26504079\tIPI\tGeneDB:Tb927.11.3300\tF\tFlagellum attachment zone protein 14\t\tmRNA\ttaxon:185431\t20151209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10310\tMCP11\t\tGO:0032403\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tF\tmitochondrial carrier protein 11\tTb09.211.1750\tmRNA\ttaxon:185431\t20160718\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13650\tARF1\t\tGO:0032403\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tF\tADP-ribosylation factor, putative\tTb09.211.4460\tmRNA\ttaxon:185431\t20160718\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13655\tARF1\t\tGO:0032403\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tF\tADP-ribosylation factor, putative\tNCDS.Tb927.9.13655\tmRNA\ttaxon:185431\t20160718\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13680\tARF1\t\tGO:0032403\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tF\tADP-ribosylation factor, putative\tTb09.211.4470\tmRNA\ttaxon:185431\t20160718\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13710\tARF1\t\tGO:0032403\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tF\tADP-ribosylation factor, putative\tTb09.211.4480\tmRNA\ttaxon:185431\t20160718\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13740\tARF1\t\tGO:0032403\tPMID:26721397\tIPI\tGeneDB:Tb927.10.6830\tF\tADP-ribosylation factor, putative\tTb09.211.4490|NCDS.Tb927.9.13715\tmRNA\ttaxon:185431\t20160718\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13785\tKMP11-5\t\tGO:0032403\tPMID:25972344\tIPI\tGeneDB:Tb927.1.4310|GeneDB:Tb927.4.2080\tF\tkinetoplastid membrane protein 11-5\tNCDS.Tb927.9.13775\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13795\tKMP11-4\t\tGO:0032403\tPMID:25972344\tIPI\tGeneDB:Tb927.1.4310|GeneDB:Tb927.4.2080\tF\tkinetoplastid membrane protein 11-4\tNCDS.Tb927.9.13785|Tb927.9.13810\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13820\tKMP11-3\t\tGO:0032403\tPMID:25972344\tIPI\tGeneDB:Tb927.1.4310|GeneDB:Tb927.4.2080\tF\tkinetoplastid membrane protein 11-3\tTb09.211.4511\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13860\tKMP11-2\t\tGO:0032403\tPMID:25972344\tIPI\tGeneDB:Tb927.1.4310|GeneDB:Tb927.4.2080\tF\tkinetoplastid membrane protein 11-2\tTb09.211.4512|Tb927.9.13880\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13920\tKMP11-1\t\tGO:0032403\tPMID:25972344\tIPI\tGeneDB:Tb927.1.4310|GeneDB:Tb927.4.2080\tF\tkinetoplastid membrane protein 11-1\tTb09.211.4513\tmRNA\ttaxon:185431\t20160803\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14000\tTb927.9.14000\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t60S ribosomal protein L12, putative\tTb09.211.4550\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15110\tTb927.9.15110\t\tGO:0032403\tPMID:23451133\tIPI\tGeneDB:Tb927.7.1770\tF\t60S ribosomal protein L5, putative\tTb09.244.2740\tmRNA\ttaxon:185431\t20141201\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032403", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0033676\tGO_REF:0000002\tISO\tGeneDB:LmjF.28.0550\tF\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0033676", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.6360\tFPRC\t\tGO:0034613\tPMID:31540971\tIMP\t\tP\tFAZ-tip-localizing protein required for cytokinesis\t\tmRNA\ttaxon:185431\t20191114\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8240\tCIF4\t\tGO:0034613\tPMID:31540971\tIMP\t\tP\tCytokinesis initiation factor 4\t\tmRNA\ttaxon:185431\t20191023\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8710\tCETN3\t\tGO:0034613\tPMID:31515877\tIMP\t\tP\tcentrin-3\t\tmRNA\ttaxon:185431\t20191122\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14680\tATR\t\tGO:0034613\tPMID:31968257\tIMP\t\tP\tphosphatidylinositol 3-related kinase, putative\tTb11.01.6300\tmRNA\ttaxon:185431\t20200717\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2610\tCAP50\t\tGO:0034613\tPMID:35447115\tIMP\t\tP\tCytoskeleton-associated protein 50 kDa\tTb11.02.0210\tmRNA\ttaxon:185431\t20220425\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.570\tBOH2\t\tGO:0034613\tPMID:32675283\tIMP\t\tP\tBait on Hook 2\t\tmRNA\ttaxon:185431\t20200907\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3130\tTZP103\t\tGO:0034613\tPMID:30810527\tIMP\t\tP\tBasalin\t\tmRNA\ttaxon:185431\t20200412\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.920\tIAD5-1\t\tGO:0034613\tPMID:31515877\tIMP\t\tP\tDynein heavy chain, axonemal\t\tmRNA\ttaxon:185431\t20191122\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1080\tCETN2\t\tGO:0034613\tPMID:32675283\tIMP\t\tP\tcentrin-2\t\tmRNA\ttaxon:185431\t20210106\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15050\tDRC4\t\tGO:0034613\tGO_REF:0000012\tISA\tUniProtKB:Q60779\tP\ttrypanin-like protein\tTb09.244.2800|GAS8\tmRNA\ttaxon:185431\t20160719\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1790\tTb927.11.1790\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.55.0001\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035328", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1800\tTb927.11.1800\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.39.0008\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035328", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1860\tTb927.11.1860\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0007\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035328", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1870\tTb927.11.1870\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0006\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035328", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1880\tTb927.11.1880\t\tGO:0035328\tPMID:23133390\tIDA\t\tC\thistone H1\tTb11.42.0005\tmRNA\ttaxon:185431\t20160923\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035328", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0035690\tPMID:26150481\tIMP\t\tP\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20151123\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035690", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.7480\tTb927.11.7480\t\tGO:0035690\tPMID:26150481\tIMP\t\tP\tvacuolar type h+ ATPase subunit, putative\tTb11.02.5470\tmRNA\ttaxon:185431\t20151123\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035690", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3300\tTb927.1.3300\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tzinc-binding phosphatase, putative\t\tmRNA\ttaxon:185431\t20141204\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.3820\tTb927.1.3820\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tATP synthase subunit, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1030\tCBP1A\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1040\tCBP1B\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1050\tCBP1C\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tserine peptidase, Clan SC, Family S10\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12040\tMAPK11\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tmitogen-activated protein kinase 11, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12490\tTb927.10.12490\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tkinesin, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12500\tTb927.10.12500\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12510\tTb927.10.12510\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tP-type H+-ATPase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14160\tAQP3\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tAquaglyceroporin 3\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14170\tAQP2\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\taquaglyceroporin 2\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14890\tKIFC1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tC-terminal motor kinesin, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1490\tMKT1L\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tTemperature dependent protein affecting M2 dsRNA replication, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15310\tTb927.10.15310\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.15320\tTb927.10.15320\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.1910\tTb927.10.1910\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tSTE/STE11 serine/threonine-protein kinase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.200\tTb927.10.200\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tvacuolar ATP synthase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.2490\tG6PD\t\tGO:0042493\tGO_REF:0000002\tISO\tGeneDB:LmjF.34.0080\tP\tglucose-6-phosphate 1-dehydrogenase\t\tmRNA\ttaxon:185431\t20131121\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.3760\tTb927.10.3760\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tvacuolar ATP synthase subunit d, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5810\tTb927.10.5810\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tThe ARF-like 2 binding protein BART, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.730\tTb927.10.730\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tATP synthase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8040\tBAD1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadaptin complex 1 subunit, putative\t\tmRNA\ttaxon:185431\t20141125\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8370\tmt-SAF29\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tMitoribosomal SSU assembly factor 29\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.8370\tmt-SAF29\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tMitoribosomal SSU assembly factor 29\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.9900\tTb927.10.9900\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tABC1 protein, putative\t\tmRNA\ttaxon:185431\t20151124\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10650\tAP3B3\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tAdaptor protein complex AP-3 subunit beta-3\tTb11.01.2420\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11430\tCUL1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcullin 1, putative\tTb11.01.3260\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.11690\tVAB\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tVacuolar proton pump subunit B, putative\tTb11.01.3560\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12240\tTb927.11.12240\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C19, putative\tTb11.01.4060\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.1240\tTb927.11.1240\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\tTb11.47.0025\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12860\tCARP2a\t\tGO:0042493\tPMID:23877697\tIMP\t\tP\tcAMP response protein, putative\tTb11.52.0004\tmRNA\ttaxon:185431\t20130830\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12860\tCARP2a\t\tGO:0042493\tPMID:23877697\tIMP\t\tP\tcAMP response protein, putative\tTb11.52.0004\tmRNA\ttaxon:185431\t20130830\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14350\tMCP22\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tmitochondrial carrier protein\tTb11.01.5950\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.14920\tTb927.11.14920\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\tTb11.01.6550\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.16210\tCARP1\t\tGO:0042493\tPMID:23877697\tIMP\t\tP\tcAMP response protein 1, putative\tTb11.01.7890\tmRNA\ttaxon:185431\t20130830\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3700\tTb927.11.3700\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tUncharacterised ACR, YagE family COG1723, putative\tTb11.02.1180\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.810\tTb927.11.810\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\tTb11.03.0330\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8130\tTb927.11.8130\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tATP synthase subunit H, putative\tTb11.01.0415\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9420\tTb927.11.9420\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tATP synthase, putative\tTb11.01.1190\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.4370\tTRYS\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\ttrypanothione synthetase\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6150\tTbNT2/927\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadenosine transporter 2\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6200\tTbNT3\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6220\tTbNT4\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6240\tTbNT5\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadenosine transporter 2\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6280\tTbNT7\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.6320\tTbNT6\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadenosine transporter 2, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1060\tCARP4\t\tGO:0042493\tPMID:23877697\tIMP\t\tP\tcAMP Response Protein 4\tTb927.3.1040|Tb03.27F10.200|Tb03.27F10.220|CMF34\tmRNA\ttaxon:185431\t20130829\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1800\tTb927.3.1800\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4000\tTb927.3.4000\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tclathrin coat assembly protein ap19, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4190\tTb927.3.4190\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tendosomal integral membrane protein, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.1080\tVAA\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tV-type ATPase, A subunit, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2020\tAP3M\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tAP-3 complex subunit mu, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2170\tTb927.4.2170\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2320\tTb927.4.2320\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4490\tMRPE\t\tGO:0042493\tPMID:11918801\tIMP\t\tP\tmultidrug resistance protein E\t\tmRNA\ttaxon:185431\t20150105\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.4510\tTb927.4.4510\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tprotein phosphatase 2C, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.590\tTb927.4.590\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tPQQ-like domain/Protein of unknown function (DUF1620), putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.760\tTb927.4.760\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tgamma-adaptin 1, putative\t\tmRNA\ttaxon:185431\t20150105\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1300\tVAa\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tvacuolar proton translocating ATPase subunit A, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.1810\tp67\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tlysosomal/endosomal membrane protein p67\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2760\tTb927.5.2760\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tUDP-Gal or UDP-GlcNAc-dependent glycosyltransferase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.286b\tAT1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tadenosine transporter 1\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.350\tISG75\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\t75 kDa invariant surface glycoprotein, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.360\tISG75\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\t75 kDa invariant surface glycoprotein\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3610\tTb927.5.3610\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tadaptor complex protein (AP) 3 delta subunit 1, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.370\tISG75\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\t75 kDa invariant surface glycoprotein, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.390\tISG75\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\t75 kDa invariant surface glycoprotein, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.400\tISG75\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\t75 kDa invariant surface glycoprotein, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.550\tVAd\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tV-type proton ATPase subunit D, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1000\tCPA\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1010\tCP\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1020\tRhodesain\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCP|CATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1030\tCP\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1040\tCP\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1050\tCP\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1060\tCP\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1520\tAQP1\t\tGO:0042493\tGO_REF:0000002\tISO\tGeneDB:LmjF.31.0020\tP\tAquaglyceroporin 1\t\tmRNA\ttaxon:185431\t20131121\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.220\tTbNT9\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tpurine nucleoside transporter\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.2600\tTb927.6.2600\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tProtein of unknown function (DUF1077), putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.3520\tTb927.6.3520\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tUncharacterised ACR, YagE family COG1723, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4000\tSGT\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tsmall glutamine-rich tetratricopeptide repeat protein, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4410\tAdoMetDC\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tS-adenosylmethionine decarboxylase\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.4460\tAdoMetDC\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tS-adenosylmethionine decarboxylase\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.5050\tTb927.6.5050\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tV-type ATPase, C subunit, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.970\tCP\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.980\tCP\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.990\tCP\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcysteine peptidase, Clan CA, family C1, Cathepsin L-like\tCATL\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1290\tTb927.7.1290\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tProtein of unknown function (DUF2012), putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3180\tTb927.7.3180\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tMu-adaptin 1, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4500\tTb927.7.4500\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tPX domain containing protein, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.4750\tTb927.7.4750\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5500\tTb927.7.5500\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5500\tTb927.7.5500\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5560\tTb927.7.5560\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tglucosamine-fructose-6-phosphate aminotransferase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.6260\tTb927.7.6260\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tTPR repeat, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.7230\tNTR\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tNADH dehydrogenase, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1480\tTb927.8.1480\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tRAVE protein 1 C terminal, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.1570\tTb927.8.1570\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tUncharacterised protein family (UPF0172), putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2100\tTb927.8.2100\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tvacuolar ATP synthase 16 kDa proteolipid subunit, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2160\tPGPA\t\tGO:0042493\tPMID:11918801\tIMP\t\tP\tmultidrug resistance protein A\t\tmRNA\ttaxon:185431\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2200\tTb927.8.2200\t\tGO:0042493\tGO_REF:0000012\tISA\tUniProtKB:AAO73006.1\tP\tterbinafine resistance locus protein (yip1), putative\t\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.2310\tTb927.8.2310\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\t(H+)-ATPase G subunit, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5450\tAAT6\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tEflornithine transporter AAT6\tAAP24\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.5950\tMKK4\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tmitogen-activated protein kinase kinase 4, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6680\tTb927.8.6680\t\tGO:0042493\tPMID:26150481\tIMP\t\tP\tclathrin assembly sigma-adaptin protein 3, putative\t\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "GeneDB\tTb927.8.8290:mRNA\tAAT10-1\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tOrnithine transporter AAT10-1\tAATP5\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12430\tTb927.9.12430\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\triboflavin kinase, putative\tTb09.211.3420|Tb927.9.12410\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13380\tATG24\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tAutophagy-related protein 24\tTb09.211.4240|SNX4\tmRNA\ttaxon:185431\t20150625\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.1350\tTb927.9.1350\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\tTb09.160.0350\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.14470\tTb927.9.14470\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tubiquitin carboxyl-terminal hydrolase, putative\tTb09.211.4910\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.15460\tTb927.9.15460\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tcalcium motive p-type ATPase, putative\tTb09.244.2570\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6360\tTb927.9.6360\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\tTb09.160.4630\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6370\tTb927.9.6370\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tMFS transporter, putative\tTb09.v2.0020\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6380\tTb927.9.6380\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\thypothetical protein, conserved\tTb09.v2.0030\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.7470\tNT10\t\tGO:0042493\tPMID:22278056\tIMP\t\tP\tpurine nucleoside transporter\tTb09.160.5480\tmRNA\ttaxon:185431\t20170726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.2970\tTSIF\t\tGO:0042534\tPMID:19911988\tIDA\t\tP\tsuppressive immunomodulating factor\t\tmRNA\ttaxon:185431\t20100218\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042534", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.10980\tTb927.10.10980\t\tGO:0042623\tGO_REF:0000012\tISA\tUniProtKB:P12861\tF\theat shock protein 90, putative\t\tmRNA\ttaxon:185431\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042623", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.2650\tTb927.11.2650\t\tGO:0042623\tGO_REF:0000012\tISA\tUniProtKB:P12861\tF\theat shock protein 84, putative\tTb11.02.0250\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042623", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.12820\tTb927.9.12820\t\tGO:0042623\tGO_REF:0000012\tISA\tUniProtKB:Q7KUM9_DROME\tF\tdynein light chain, putative\tTb09.211.3770\tmRNA\ttaxon:185431\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042623", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2430\tLCCR4\t\tGO:0042779\tPMID:33406257\tIMP\t\tP\tEndonuclease/Exonuclease/phosphatase family, putative\t\tmRNA\ttaxon:185431\t20210323\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042779", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.8190\tRAD51\t\tGO:0043142\tGO_REF:0000002\tISO\tGeneDB:LmjF.28.0550\tF\tDNA repair protein RAD51\tTb11.01.0360\tmRNA\ttaxon:185431\t20130913\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043142", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.4310\tFAZ2\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 2\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.12920\tFAZ18\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 18\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.14320\tFAZ9\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tArmadillo/beta-catenin-like repeat, putative\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.840\tFAZ6\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 6\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.12530\tFAZ3\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 3\tTb11.01.4370\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.3300\tSAS-4\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tSpindle assembly abnormal 4\tTb11.02.0810|CENPJ\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.9290\tFAZ20\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tPseudokinase, putative\tTb11.01.1050\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3300\tFAZ19\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 19\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.2080\tCC2D\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tCoiled-coil and C2 domain-containing protein\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.3740\tFAZ1\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tflagellar attachment zone protein 1\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.4.5340\tFAZ11\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 11\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.5.3010\tGRBC6\t\tGO:0043234\tPMID:22396527\tIPI\tGeneDB:Tb927.2.3180|GeneDB:Tb927.2.3800|GeneDB:Tb927.3.1820|GeneDB:Tb927.8.8170|GeneDB:Tb927.10.10130|GeneDB:Tb927.10.10830|GeneDB:Tb927.10.11870|GeneDB:Tb927.11.1250|GeneDB:Tb927.11.2530|GeneDB:Tb11.02.5390|GeneDB:Tb927.11.15850|GeneDB:Tb927.11.16860\tC\tMRB1 complex subunit MRB3010\tMRB3010\tmRNA\ttaxon:185431\t20150105\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3330\tFAZ10\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellar attachment zone protein 10\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.6980\tFAZ14\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 14\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.8.7070\tFAZ15\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 15\t\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.10530\tFAZ4\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tFlagellum attachment zone protein 4\tTb09.211.1910\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13785\tKMP11-5\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tkinetoplastid membrane protein 11-5\tNCDS.Tb927.9.13775\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13795\tKMP11-4\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tkinetoplastid membrane protein 11-4\tNCDS.Tb927.9.13785|Tb927.9.13810\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13820\tKMP11-3\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tkinetoplastid membrane protein 11-3\tTb09.211.4511\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13860\tKMP11-2\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tkinetoplastid membrane protein 11-2\tTb09.211.4512|Tb927.9.13880\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.13920\tKMP11-1\t\tGO:0043234\tPMID:27226595\tIPI\tGeneDB:Tb927.11.15800\tC\tkinetoplastid membrane protein 11-1\tTb09.211.4513\tmRNA\ttaxon:185431\t20160602\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.4380\tSAM50\t\tGO:0043623\tGO_REF:0000002\tIDA\t\tP\tsorting assembly machinery 50 kDa subunit, putative\tTOB55\tmRNA\ttaxon:185431\t20090617\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043623", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.5450\tNLP\t\tGO:0044212\tPMID:26378228\tIDA\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20170823\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0044212", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.10330\tRCCP\t\tGO:0044212\tPMID:26378228\tIDA\t\tF\tISWI complex protein\tTb11.01.2100\tmRNA\ttaxon:185431\t20160706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0044212", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1810\tISWI\t\tGO:0044212\tPMID:26378228\tIDA\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20160706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0044212", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.1060\tFYRP\t\tGO:0044212\tPMID:26378228\tIDA\t\tF\tISWI complex protein\t\tmRNA\ttaxon:185431\t20160706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0044212", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.1700\tTb927.3.1700\t\tGO:0046467\tPMID:20382188\tEXP\t\tP\tdiacylglycerol acyltransferase, putative\t\tmRNA\ttaxon:185431\t20100730\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0046467", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.7930\tPGAM\t\tGO:0046537\tPMID:10691985\tTAS\t\tF\t2,3-bisphosphoglycerate-independent phosphoglycerate mutase\t\tmRNA\ttaxon:185431\t20090407\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0046537", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.10.210\tTbGAA1\t\tGO:0046658\tPMID:12582175\tISS\t\tC\tGPI transamidase component GAA1\t\tmRNA\ttaxon:185431\t20100921\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0046658", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.3000\tCDA\t\tGO:0047844\tPMID:31391279\tIDA\t\tF\tcytidine deaminase\tTb09.160.1680\tmRNA\ttaxon:185431\t20200116\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0047844", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.5890\tSPPS\t\tGO:0050347\tGO_REF:0000024\tISO\tGeneDB:TcCLB.509445.30\tF\tsolanesyl-diphosphate synthase, putative\tTb09.160.4300\tmRNA\ttaxon:185431\t20140611\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0050347", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.11.5970\tTb927.11.5970\t\tGO:0050429\tPMID:25769297\tIDA\t\tF\tphosphoinositide-specific phospholipase C\tTb11.02.3780\tmRNA\ttaxon:185431\t20171005\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0050429", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3770\tnnr\t\tGO:0052857\tGO_REF:0000012\tISA\tUniProtKB:P31806\tF\tBifunctional NAD(P)H-hydrate repair enzyme\tyjeF\tmRNA\ttaxon:185431\t20160126\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0052857", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.6.1260\tPSB1\t\tGO:0070011\tPMID:10498178\tISS\t\tF\tproteasome beta-1 subunit, putative\t\tmRNA\ttaxon:185431\t20100721\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0070011", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.5450\tLPN\t\tGO:0070584\tPMID:29679486\tIMP\t\tP\tlipin\t\tmRNA\ttaxon:185431\t20180816\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0070584", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.6060\tERV1\t\tGO:0070584\tPMID:28366668\tIMP\t\tP\tPresent in the outer mitochondrial membrane proteome 4\tPOMP4|Tb09.160.4440\tmRNA\ttaxon:185431\t20200405\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0070584", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3160\tPAP1\t\tGO:0071050\tPMID:28456523\tIMP\t\tP\tKKT-interacting protein 8\tKKIP8\tmRNA\ttaxon:185431\t20170515\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071050", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3780\tPAP2\t\tGO:0071050\tPMID:28456523\tIMP\t\tP\tPolynucleotide adenylyltransferase 2\t\tmRNA\ttaxon:185431\t20170515\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071050", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.120\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.1.70\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.1210\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.280\tRHS2\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 2 (RHS2), putative\t\tmRNA\ttaxon:185431\t20190720\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.340\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20190722\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.380\tRHS2\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 2 (RHS2), putative\t\tmRNA\ttaxon:185431\t20190720\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.400\tRHS2\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 2 (RHS2), putative\t\tmRNA\ttaxon:185431\t20190720\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.450\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.470\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.510\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.2.560\tRHS4\t\tGO:0071850\tPMID:30544263\tIMP\t\tP\tretrotransposon hot spot protein 4 (RHS4), putative\t\tmRNA\ttaxon:185431\t20200406\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071850", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.7.3520\tMPC2\t\tGO:1902361\tPMID:26748989\tIMP\t\tP\tMitochondrial pyruvate carrier 2\t\tmRNA\ttaxon:185431\t20160725\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:1902361", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.9.3780\tMPC1\t\tGO:1902361\tPMID:26748989\tIMP\t\tP\tMitochondrial pyruvate carrier 1\tTb09.160.2380\tmRNA\ttaxon:185431\t20160725\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:1902361", "taxon": "NCBITaxon:185431", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tTb927.3.3490\tTDP1\t\tGO:1902377\tPMID:23361461\tIDA\t\tC\tTrypanosome DNA binding protein 1\tHMGB\tmRNA\ttaxon:185431\t20170823\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:1902377", "taxon": "NCBITaxon:185431", "rule": 20 } ], "gorule-0000001": [ { "level": "ERROR", "line": "TriTrypDB\tTb927.1.1240\tTb927.1.1240\t\tGO:0005829\tGO_REF:0000002\tNR\t\tC\tcytidine triphosphate synthase, putative\t\tmRNA\ttaxon:185431\t20100816\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.1110\tTb927.10.1110\t\tGO:0005871\tGO_REF:0000002\tNR\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20110420\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.14720\tPEX13\t\tGO:0007031\tPMID:19185591\tNR\t\tP\tperoxin 13\t\tmRNA\ttaxon:185431\t20101015\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.14720\tPEX13\t\tGO:0015919\tPMID:19185591\tNR\t\tP\tperoxin 13\t\tmRNA\ttaxon:185431\t20101015\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.14720\tPEX13\t\tGO:0046860\tPMID:19185591\tNR\t\tC\tperoxin 13\t\tmRNA\ttaxon:185431\t20101015\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.15400\tTb927.10.15400\t\tGO:0005871\tGO_REF:0000002\tNR\t\tC\tkinesin, putative\t\tmRNA\ttaxon:185431\t20110420\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.4950\tSSm2-2\t\tGO:0016607\tPMID:17105994\tNR\t\tC\tU2 small nuclear ribonucleoprotein 16.5K\t\tmRNA\ttaxon:185431\t20160816\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.8020\tPOP\t\tGO:0019786\tGO_REF:0000002\tNR\t\tF\tserine peptidase clan SC, family S9A, putative\t\tmRNA\ttaxon:185431\t20100618\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.10.890\tFCP4\t\tGO:0005871\tGO_REF:0000002\tNR\t\tC\tkinesin, putative\tKIN15\tmRNA\ttaxon:185431\t20110420\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.11.5530\tTb927.11.5530\t\tGO:0015934\tGO_REF:0000002\tNR\t\tC\tLSU ribosomal protein, mitochondrial, putative\tTb11.02.3230\tmRNA\ttaxon:185431\t20170601\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.3.1700\tTb927.3.1700\t\tGO:0016021\tGO_REF:0000002\tNR\t\tC\tdiacylglycerol acyltransferase, putative\t\tmRNA\ttaxon:185431\t20100730\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.5.1140\tC/EK1\t\tGO:0005737\tGO_REF:0000002\tNR\t\tC\tcholine/ethanolamine kinase\t\tmRNA\ttaxon:185431\t20100803\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.3250\tTb927.7.3250\t\tGO:0006810\tPMID:11227758\tNR\t\tP\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.7.3260\tTb927.7.3260\t\tGO:0006810\tPMID:11227758\tNR\t\tP\texpression site-associated gene (ESAG) protein, putative\t\tmRNA\ttaxon:185431\t20220901\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.8.5140\tTb927.8.5140\t\tGO:0005829\tGO_REF:0000002\tNR\t\tC\tdiacylglycerol kinase, putative\t\tmRNA\ttaxon:185431\t20100803\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "GeneDB\tTb927.8.920:mRNA\tPEX4\t\tGO:0005634\tPMID:28727848\tIDA\t\tC\tubiquitin-conjugating enzyme E2, putative\t\tmRNA\ttaxon:1\t\t\t\t", "type": "Invalid date", "message": "GORULE:0000001: empty", "obj": "''", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.10370\tTb927.9.10370\t\tGO:0005929\tGO_REF:0000002\tNR\t\tC\tTAX-1\tTb09.211.1790\tmRNA\ttaxon:185431\t20111123\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tTb927.9.9940\tPACRGB\t\tGO:0005929\tGO_REF:0000002\tNR\t\tC\tparkin coregulated gene protein\tTb09.211.1470\tmRNA\ttaxon:185431\t20111123\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 } ] } }