# Group: pombase - Dataset: pombase

## SUMMARY

This report generated on 2026-05-20

  * Associations: 66424
  * Lines in file (incl headers): 77061
  * Lines skipped: 10633
## Header From Original Association File

> !gaf-version: 2.2  
> !generated-by: UniProt  
> !date-generated: 2026-04-30 09:40  
> !go-version: http://purl.obolibrary.org/obo/go/releases/2026-04-27/extensions/go-plus.ofn  

## Contents

[gorule-0000002](#gorule-0000002)

[gorule-0000005](#gorule-0000005)

[gorule-0000006](#gorule-0000006)

[gorule-0000007](#gorule-0000007)

[gorule-0000008](#gorule-0000008)

[gorule-0000011](#gorule-0000011)

[gorule-0000013](#gorule-0000013)

[gorule-0000015](#gorule-0000015)

[gorule-0000016](#gorule-0000016)

[gorule-0000017](#gorule-0000017)

[gorule-0000018](#gorule-0000018)

[gorule-0000020](#gorule-0000020)

[gorule-0000022](#gorule-0000022)

[gorule-0000027](#gorule-0000027)

[gorule-0000028](#gorule-0000028)

[gorule-0000029](#gorule-0000029)

[gorule-0000030](#gorule-0000030)

[gorule-0000037](#gorule-0000037)

[gorule-0000039](#gorule-0000039)

[gorule-0000042](#gorule-0000042)

[gorule-0000043](#gorule-0000043)

[gorule-0000046](#gorule-0000046)

[gorule-0000050](#gorule-0000050)

[gorule-0000055](#gorule-0000055)

[gorule-0000058](#gorule-0000058)

[gorule-0000061](#gorule-0000061)

[gorule-0000063](#gorule-0000063)

[gorule-0000064](#gorule-0000064)

[gorule-0000065](#gorule-0000065)

[other](#other)


## MESSAGES

### gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

* total: 0
### gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations are not allowed for direct annotations to 'protein binding ; GO:0005515 or GO:0005488 binding''

* total: 0
### gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology

* total: 0
### gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

* total: 1
#### Messages
* WARNING - Violates GO Rule: GORULE:0000007: IPI should not be used with catalytic activity molecular function terms -- `ComplexPortal	CPX-25780	rdrc_schpo	enables	GO:0003968	PMID:15607976	IPI		F	RNA-directed RNA polymerase complex	cid12:hrr1:rdp1|RDR complex	protein_complex	taxon:284812	20241210	ComplexPortal		
`
### gorule-0000008

No annotations should be made to uninformative high level terms

* total: 2
#### Messages
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `PomBase	SPAC1039.08	soa1	involved_in	GO:0170039	GO_REF:0000117	IEA	ARBA:ARBA00044577	P	serine O-acetyltransferase		protein	NCBITaxon:4896	20260428	UniProt		PomBase:SPAC1039.08
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `PomBase	SPAC343.16	lys2	involved_in	GO:0170038	GO_REF:0000117	IEA	ARBA:ARBA00044576	P	homoaconitate hydratase Lys2		protein	NCBITaxon:4896	20260428	UniProt		PomBase:SPAC343.16
`
### gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

* total: 0
### gorule-0000013

Taxon-appropriate annotation check

* total: 0
### gorule-0000015

Dual species taxon check

* total: 0
### gorule-0000016

With/From: IC annotations require a With/From GO ID

* total: 5
#### Messages
* WARNING - Violates GO Rule: GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column that is also different from the entry in the "GO ID" column -- `PomBase	SPAC11H11.04	mam2	enables	GO:0005085	GO_REF:0000111	IC		F	pheromone p-factor receptor Mam2		protein	NCBITaxon:4896	20260415	PomBase		PomBase:SPAC11H11.04
`
* WARNING - Violates GO Rule: GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column that is also different from the entry in the "GO ID" column -- `PomBase	SPAC18G6.04c	shm2	is_active_in	GO:0005759	GO_REF:0000111	IC		C	serine hydroxymethyltransferase Shm2		protein	NCBITaxon:4896	20260202	PomBase		PomBase:SPAC18G6.04c
`
* WARNING - Violates GO Rule: GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column that is also different from the entry in the "GO ID" column -- `PomBase	SPAC328.09	odc1	enables	GO:0000515	GO_REF:0000111	IC	GO:0000515	F	mitochondrial carrier, 2-oxoadipate/2-oxoglutarate		protein	NCBITaxon:4896	20250318	PomBase		PomBase:SPAC328.09
`
* WARNING - Violates GO Rule: GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column that is also different from the entry in the "GO ID" column -- `PomBase	SPBC31F10.07	lsb5	enables	GO:0030674	GO_REF:0000111	IC		F	actin cortical patch component Lsb5		protein	NCBITaxon:4896	20260422	PomBase		PomBase:SPBC31F10.07
`
* WARNING - Violates GO Rule: GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column that is also different from the entry in the "GO ID" column -- `PomBase	SPCC584.04	sup35	enables	GO:0000287	PMID:15099522	IC		F	cytoplasmic translation release factor class II, GTPase eRF3	erf3|sup9	protein	NCBITaxon:4896	20231211	DisProt	has_input(ChEBI:18420)	PomBase:SPCC584.04
`
### gorule-0000017

IDA annotations must not have a With/From entry

* total: 0
### gorule-0000018

IPI annotations require a With/From entry

* total: 295
#### Messages
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1071.06	arp9	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Arp9		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC1071.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1071.06	arp9	part_of	GO:0016586	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Arp9		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC1071.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC10F6.09c	psm3	part_of	GO:0030892	PMID:11069892	IPI		C	mitotic/meiotic cohesin complex ATPase subunit Psm3/Smc3	smc3	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC10F6.09c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1142.03c	swi2	part_of	GO:0034974	PMID:14663140	IPI		C	DNA recombination mediator Swi2	SPAC17G6.20c	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC1142.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC11E3.05	sea3	part_of	GO:0061700	PMID:33534698	IPI		C	GATOR2-SEACAT complex/GATOR1-SEACIT GTPase complex ubiquitin-protein ligase E3 subunit Sea3		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC11E3.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC11H11.06	arp2	part_of	GO:0005885	PMID:16087707	IPI		C	ARP2/3 actin-organizing complex actin-related protein subunit Arp2	SPAC22F8.01	protein	NCBITaxon:4896	20250813	ComplexPortal		PomBase:SPAC11H11.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1250.01	snf21	part_of	GO:0016586	PMID:18622392	IPI		C	RSC-type complex ATPase Snf21	SPAC29A4.21|brg1	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC1250.01
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC12B10.07	acp1	part_of	GO:0008290	PMID:16866873	IPI		C	F-actin capping protein alpha subunit		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPAC12B10.07
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC12G12.01c	sea4	part_of	GO:0061700	PMID:33534698	IPI		C	GATOR2-SEACAT complex ubiquitin-protein ligase E3 subunit Sea4	SPAC630.02	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC12G12.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC12G12.05c	taf9	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex/transcription factor TFIID complex subunit Taf9		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC12G12.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC12G12.13c	cid14	part_of	GO:0031499	PMID:17512405	IPI		C	TRAMP complex poly(A) polymerase subunit Cid14		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC12G12.13c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC13A11.03	mcp7	part_of	GO:0120231	PMID:32414915	IPI		C	meiosis specific coiled-coil protein Mcp7	mnd1|mug32	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC13A11.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC13A11.04c	ubp8	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex ubiquitin C-terminal hydrolase Ubp8		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC13A11.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC13G7.07	arb2	part_of	GO:0033167	PMID:17310250	IPI		C	argonaute binding protein 2		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC13G7.07
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC140.03	arb1	part_of	GO:0033167	PMID:17310250	IPI		C	argonaute inhibitor protein 1	csp12	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC140.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1486.02c	dsc2	part_of	GO:0044695	PMID:23760507	IPI		C	Golgi Dsc E3 ligase complex transmembrane subunit, C-terminal UBA domain Dsc2	ucp14	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPAC1486.02c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC14C4.02c	smc5	part_of	GO:0030915	PMID:16478984	IPI		C	Smc5-6 complex SMC P-loop ATPase subunit Smc5	spr18	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC14C4.02c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC14C4.16	dad3	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Dad3		protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPAC14C4.16
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1556.08c	cbs2	part_of	GO:0031588	PMID:17937917	IPI		C	serine/threonine protein kinase AMPK (gamma) subunit Cbs2	SPAC1F12.01c	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC1556.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC15A10.02	taf12	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex/transcription factor TFIID complex subunit A Taf12		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC15A10.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC15F9.02	seh1	part_of	GO:0061700	PMID:33534698	IPI		C	GATOR2-SEACAT complex WD repeat subunit Seh1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC15F9.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1687.01	rpc19	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I and III subunit Rpc19	SPAPYUL23.01|rpa17	protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPAC1687.01
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC16A10.05c	dad1	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Dad1		protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPAC16A10.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC16A10.06c	nse2	part_of	GO:0030915	PMID:16478984	IPI		C	Smc5-6 complex non-SMC SUMO ligase subunit Nse2		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC16A10.06c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC16C9.04c	mot2	part_of	GO:0030015	PMID:27851962	IPI		C	CCR4-Not complex ubiquitin-protein ligase E3 subunit 4	not4	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC16C9.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC16C9.05	cph1	part_of	GO:0032221	PMID:37076472	IPI		C	Clr6 histone deacetylase associated PHD finger protein Cph1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC16C9.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC17C9.01c	nuc2	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex TPR lobe subcomplex subunit Apc3	SPAC1851.01|apc3	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPAC17C9.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC17G6.10	ssr1	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Ssr1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC17G6.10
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC17G6.10	ssr1	part_of	GO:0016586	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Ssr1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC17G6.10
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC17G8.04c	arc5	part_of	GO:0005885	PMID:16087707	IPI		C	ARP2/3 actin-organizing complex subunit Arc5	arc15	protein	NCBITaxon:4896	20250813	ComplexPortal		PomBase:SPAC17G8.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC17H9.20	psc3	part_of	GO:0030892	PMID:11069892	IPI		C	mitotic cohesin complex, STAG protein subunit Psc3	SPAC607.01	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC17H9.20
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1805.07c	dad2	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Dad2	hos2	protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPAC1805.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1834.01	erf1	part_of	GO:0018444	PMID:19417105	IPI		C	cytoplasmic translation release factor class I eRF1	sup45	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC1834.01
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1851.03	ckb1	part_of	GO:0005956	PMID:25410910	IPI		C	CK2 family regulatory subunit Ckb1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC1851.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC18B11.07c	rhp6	part_of	GO:0033503	PMID:17363370	IPI		C	histone H2B-K119 ubiquitin ligase complex (HULC), ubiquitin conjugating enzyme E2 subunit Rhp6/Rad6	rad6|sng1|ubc2	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC18B11.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC18G6.02c	chp1	part_of	GO:0030958	PMID:14704433	IPI		C	heterochromatin (HP1) family chromodomain protein Chp1		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC18G6.02c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC18G6.09c	edc1	part_of	GO:0098745	PMID:27183195	IPI		C	Dcp2-Dcp1 mRNA-decapping complex subunit Edc1	dbs1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC18G6.09c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1952.05	gcn5	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex histone acetyltransferase catalytic subunit Gcn5	kat2	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC1952.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC19A8.05c	sst4	part_of	GO:0033565	PMID:17951524	IPI		C	sorting receptor for ubiquitinated membrane proteins, ESCRT 0 complex subunit Sst4	vps27	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC19A8.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC19A8.12	dcp2	part_of	GO:0098745	PMID:27183195	IPI		C	mRNA decapping complex catalytic subunit Dcp2		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC19A8.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC19B12.12c	yip11	part_of	GO:0032797	PMID:33754639	IPI		C	SMN complex subunit Yip11/Gem2	yip1|yip1-a	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC19B12.12c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC19G12.01c	cut20	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex platform subcomplex scaffold WD repeat subunit Apc4/Cut20	SPAPJ698.04c|apc4|lid1	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPAC19G12.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC19G12.12	dlp1	part_of	GO:0032478	PMID:14519123	IPI		C	decaprenyl diphosphate synthase subunit 2 Dlp1		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPAC19G12.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC19G12.15c	tpp1	part_of	GO:0005946	PMID:12153582	IPI		C	trehalose-6-phosphate phosphatase Tpp1		protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPAC19G12.15c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1B2.05	mcm5	part_of	GO:0042555	PMID:10770926	IPI		C	MCM complex subunit Mcm5	SPAC3F10.01|nda4	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC1B2.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1B3.05	not3	part_of	GO:0030015	PMID:27851962	IPI		C	CCR4-Not complex NOT box subunit 3/5		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC1B3.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1B3.12c	rpb10	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase I, II, and III subunit Rpb10		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC1B3.12c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1B3.12c	rpb10	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I, II, and III subunit Rpb10		protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPAC1B3.12c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC1F3.07c	rsc58	part_of	GO:0016586	PMID:18622392	IPI		C	RSC complex subunit Rsc58		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC1F3.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC20G8.06	not1	part_of	GO:0030015	PMID:27851962	IPI		C	CCR4-Not complex scaffold subunit 1		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC20G8.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC20H4.02	dsc3	part_of	GO:0044695	PMID:23760507	IPI		C	Golgi Dsc E3 ligase complex subunit Dsc3		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPAC20H4.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC21E11.03c	pcr1	part_of	GO:1990243	PMID:9391101	IPI		C	DNA-binding pioneer transcription factor Pcr1	mts2	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC21E11.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC21E11.06	tif224	part_of	GO:0005851	PMID:26901872	IPI		C	translation initiation factor eIF2B delta subunit		protein	NCBITaxon:4896	20260109	ComplexPortal		PomBase:SPAC21E11.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC222.10c	byr4	part_of	GO:1990334	PMID:9742395	IPI		C	SIN signalling inhibitor, two-component GAP Byr4		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC222.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC222.15	meu13	part_of	GO:0120231	PMID:32414915	IPI		C	Tat binding protein 1(TBP-1)-interacting protein (TBPIP) homolog	SPAC821.01	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC222.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC222.19	lam3	part_of	GO:0071986	PMID:29199950	IPI		C	Ragulator complex subunit, human LAMTOR3 ortholog	tam1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC222.19
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC22F3.13	tsc1	part_of	GO:0033596	PMID:12136010	IPI		C	Rheb GAP, hamartin Tsc1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC22F3.13
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC22F8.12c	shf1	part_of	GO:0033503	PMID:17363370	IPI		C	histone H2B-K119 ubiquitin ligase complex (HULC) subunit Shf1		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC22F8.12c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC22H12.02	tfg3	part_of	GO:0016514	PMID:18622392	IPI		C	TFIID, TFIIF, Ino80, SWI/SNF, and NuA4 complex YEATS family subunit Tfg3	taf14	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC22H12.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23C11.11	cka1	part_of	GO:0005956	PMID:25410910	IPI		C	serine/threonine protein kinase Cka1	orb5	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC23C11.11
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23C11.12	hcn1	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex TPR lobe accessory factor subunit Hcn1/Apc12	apc12	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPAC23C11.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23C11.15	pst2	part_of	GO:0032221	PMID:37076472	IPI		C	Clr6 histone deacetylase complex subunit Pst2		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23C11.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23C4.15	rpb5	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase I, II and III subunit Rpb5		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23C4.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23C4.15	rpb5	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I, II and III subunit Rpb5		protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPAC23C4.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23C4.19	spt5	part_of	GO:0032044	PMID:19460865	IPI		C	DSIF transcription elongation factor complex subunit Spt5		protein	NCBITaxon:4896	20251211	ComplexPortal		PomBase:SPAC23C4.19
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23D3.09	arp42	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Arp42	arp4	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23D3.09
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23D3.09	arp42	part_of	GO:0016586	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Arp42	arp4	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23D3.09
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23D3.16	lam4	part_of	GO:0071986	PMID:29199950	IPI		C	Ragulator complex subunit, human LAMTOR4 ortholog		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC23D3.16
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23E2.02	lsd2	part_of	GO:0033193	PMID:17434129	IPI		C	histone demethylase SWIRM2	saf140|swm2	protein	NCBITaxon:4896	20260108	ComplexPortal		PomBase:SPAC23E2.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23G3.01	rpb2	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase II complex subunit Rpb2	SPAC521.06	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23G3.01
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23G3.07c	snf30	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF complex subunit Snf30		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23G3.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23G3.10c	ssr3	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Ssr3		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23G3.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23G3.10c	ssr3	part_of	GO:0016586	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Ssr3		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23G3.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23H3.03c	npr2	part_of	GO:1990130	PMID:33534698	IPI		C	GATOR1-SEACIT GTPase activating complex subunit Npr2		protein	NCBITaxon:4896	20251213	ComplexPortal		PomBase:SPAC23H3.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23H3.08c	bub3	part_of	GO:1990298	PMID:22660415	IPI		C	mitotic spindle checkpoint WD repeat protein Bub3		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC23H3.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23H3.10	ssr2	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Ssr2		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23H3.10
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23H3.10	ssr2	part_of	GO:0016586	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Ssr2		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23H3.10
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC23H4.12	alp13	part_of	GO:0032221	PMID:37076472	IPI		C	Clr6 histone deacetylase complex, chromodomain subunit Alp13/Eaf3	eaf3	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC23H4.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC24B11.11c	sid2	part_of	GO:0034973	PMID:10769201	IPI		C	serine/threonine protein kinase (NDR family) Sid2		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC24B11.11c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC25H1.06	pcf3	part_of	GO:0033186	PMID:25313826	IPI		C	histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex WD repeat subunit C, Pcf3		protein	NCBITaxon:4896	20251213	ComplexPortal		PomBase:SPAC25H1.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC26H5.03	pcf2	part_of	GO:0033186	PMID:25313826	IPI		C	histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex WD repeat subunit, Pcf2	cac2	protein	NCBITaxon:4896	20251213	ComplexPortal		PomBase:SPAC26H5.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC27D7.05c	apc14	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex subunit Apc14	omt1	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPAC27D7.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC29A4.18	prw1	part_of	GO:0032221	PMID:37076472	IPI		C	histone chaperone, Clr6 and Rpd3L complex WD repeat subunit Prw1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC29A4.18
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC29B12.06c	rcd1	part_of	GO:0030015	PMID:27851962	IPI		C	CCR4-Not complex RNA-binding protein subunit 9	not9	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC29B12.06c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC2E1P5.04c	cwg2	part_of	GO:0005953	PMID:9781874	IPI		C	geranylgeranyltransferase I beta subunit Cwg2	orb7	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC2E1P5.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC2F3.17c	lsm6	part_of	GO:0120115	PMID:32518066	IPI		C	Lsm2-8 complex subunit Lsm6		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC2F3.17c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC2F7.07c	cph2	part_of	GO:0032221	PMID:37076472	IPI		C	Clr6 histone deacetylase associated PHD-finger protein Cph2	rco1	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC2F7.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC2F7.08c	snf5	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF complex subunit Snf5		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC2F7.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC2G11.08c	smn1	part_of	GO:0032797	PMID:33754639	IPI		C	SMN complex subunit Smn1/Gem1	yab8	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC2G11.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC30D11.08c	phf2	part_of	GO:0033193	PMID:17434129	IPI		C	Lsd1/2 complex PHD finger protein Phf2	saf60|swp2	protein	NCBITaxon:4896	20260108	ComplexPortal		PomBase:SPAC30D11.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC328.03	tps1	part_of	GO:0005946	PMID:12153582	IPI		C	alpha,alpha-trehalose-phosphate synthase [UDP-forming]		protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPAC328.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC343.03	apc11	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex ubiquitin -protein ligase E3 subunit Apc11		protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPAC343.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC343.14c	tif222	part_of	GO:0005851	PMID:26901872	IPI		C	translation initiation factor eIF2B beta subunit		protein	NCBITaxon:4896	20260109	ComplexPortal		PomBase:SPAC343.14c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC3A11.14c	pkl1	part_of	GO:1990811	PMID:25987607	IPI		C	kinesin-14 family minus-end directed microtubule motor Pkl1	SPAC3H5.03c|klp1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC3A11.14c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC3A12.07	rpb11	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase II complex subunit Rpb11		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC3A12.07
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC3H1.01c	orc3	part_of	GO:0005664	PMID:10535928	IPI		C	origin recognition complex subunit Orc3	SPAP14E8.06c|orp3	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPAC3H1.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC3H5.06c	pol1	part_of	GO:0005658	PMID:14766746	IPI		C	DNA polymerase alpha catalytic subunit	polA|swi7	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC3H5.06c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC4A8.11c	fas2	part_of	GO:0005835	PMID:9693066	IPI		C	fatty acid synthase alpha subunit Fas2	lsd1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC4A8.11c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC4D7.09	tif223	part_of	GO:0005851	PMID:26901872	IPI		C	translation initiation factor eIF2B gamma subunit		protein	NCBITaxon:4896	20260109	ComplexPortal		PomBase:SPAC4D7.09
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC4D7.10c	spt20	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex subunit Spt20		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC4D7.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC4D7.11	dsc4	part_of	GO:0044695	PMID:23760507	IPI		C	Golgi Dsc E3 ligase complex subunit Dsc4		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPAC4D7.11
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC4D7.15	gem6	part_of	GO:0032797	PMID:33754639	IPI		C	SMN complex subunit Gem6	new12	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC4D7.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC4F8.11	sea2	part_of	GO:0061700	PMID:33534698	IPI		C	GATOR2-SEACAT complex WD repeat subunit Sea2	rtc1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC4F8.11
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC57A10.14	sgf11	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex deubiquitinating submodule subunit Sgf11		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC57A10.14
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC57A7.11	mip1	part_of	GO:0031931	PMID:18076573	IPI		C	TORC1 substrate adaptor, WD repeat protein, Raptor homolog Mip1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC57A7.11
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC589.08c	dam1	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Dam1		protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPAC589.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC630.03	arp3	part_of	GO:0005885	PMID:16087707	IPI		C	ARP2/3 actin-organizing complex actin-related protein subunit Arp3	act2	protein	NCBITaxon:4896	20250813	ComplexPortal		PomBase:SPAC630.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC630.13c	tsc2	part_of	GO:0033596	PMID:12136010	IPI		C	Rheb GAP, tuberin Tsc2		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC630.13c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC631.01c	acp2	part_of	GO:0008290	PMID:16866873	IPI		C	F-actin capping protein beta subunit Acp2		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPAC631.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC6B12.10c	spp1	part_of	GO:0005658	PMID:14766746	IPI		C	DNA primase catalytic subunit Spp1	pri1	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC6B12.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC6F12.14	cut23	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex TPR lobe subcomplex subunit Apc8	apc8	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPAC6F12.14
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC6F12.15c	cut9	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex TPR lobe subcomplex subunit Cut9/Apc6	apc6|dre1	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPAC6F12.15c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC6F12.16c	mtr4	part_of	GO:0031499	PMID:17512405	IPI		C	TRAMP complex ATP-dependent RNA helicase subunit Mtr4		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC6F12.16c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC6F6.08c	cdc16	part_of	GO:1990334	PMID:9742395	IPI		C	SIN signalling inhibitor, two-component GAP Cdc16	bub2	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC6F6.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC6F6.10c	arc2	part_of	GO:0005885	PMID:16087707	IPI		C	ARP2/3 actin-organizing complex subunit Arc34	arc34	protein	NCBITaxon:4896	20250813	ComplexPortal		PomBase:SPAC6F6.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC6G9.07c	arc4	part_of	GO:0005885	PMID:16087707	IPI		C	ARP2/3 actin-organizing complex subunit Arc4	arc19	protein	NCBITaxon:4896	20250813	ComplexPortal		PomBase:SPAC6G9.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC6G9.12	cfr1	part_of	GO:0034044	PMID:27974503	IPI		C	exomer complex BRCT domain subunit Cfr1/Chs5	chs5	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC6G9.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC6G9.16c	xrc4	part_of	GO:0032807	PMID:24847916	IPI		C	XRCC4 nonhomologous end joining factor Xrc4		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAC6G9.16c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC821.08c	slp1	part_of	GO:0033597	PMID:22437499	IPI		C	substrate-specific mitotic metaphase/anaphase APC coactivator Slp1/Cdc20	cdc20	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAC821.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC8C9.15c	tif225	part_of	GO:0005851	PMID:26901872	IPI		C	translation initiation factor eIF2B epsilon subunit		protein	NCBITaxon:4896	20260109	ComplexPortal		PomBase:SPAC8C9.15c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC8C9.17c	spc34	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Spc34		protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPAC8C9.17c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC926.09c	fas1	part_of	GO:0005835	PMID:9693066	IPI		C	fatty acid synthase beta subunit Fas1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC926.09c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC959.09c	apc5	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex platform subcomplex scaffold TPR subunit Apc5	SPAP32A8.01c	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPAC959.09c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAC9E9.08	rad26	part_of	GO:0070310	PMID:10559981	IPI		C	ATRIP, ATR checkpoint kinase regulatory subunit Rad26		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPAC9E9.08
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPACUNK4.06c	rpb7	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase complex II subunit Rpb7	SPAPYUK71.02|csp3	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPACUNK4.06c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAP27G11.04c	tad3	part_of	GO:0052718	PMID:17875641	IPI		C	tRNA specific adenosine-34 deaminase subunit Tad3		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAP27G11.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAP8A3.06	uaf2	part_of	GO:0089701	PMID:26215567	IPI		C	U2 small nuclear RNA auxiliary factor small subunit, U2AF-23	ods2	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAP8A3.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAPB1A10.04c	cwp1	part_of	GO:0005953	PMID:9781874	IPI		C	geranylgeranyltransferase I and farnesyltransferase alpha subunit Cwp1		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPAPB1A10.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAPB1E7.06c	eme1	part_of	GO:0048476	PMID:17363897	IPI		C	Holliday junction resolvase subunit Eme1	mms4|slx2	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAPB1E7.06c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAPYUG7.02c	sin1	part_of	GO:0031932	PMID:22645648	IPI		C	MAP kinase and TOR substrate adaptor Sin1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAPYUG7.02c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPAPYUG7.04c	rpb9	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase II complex TFIIS subunit Rpb9		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPAPYUG7.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC106.09	cut4	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex platform subcomplex scaffold subunit Apc1	apc1	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPBC106.09
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1289.07c	rpc40	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I and III subunit Rpc40	rpa42	protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPBC1289.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC12C2.02c	ste20	part_of	GO:0031932	PMID:22645648	IPI		C	Rictor homolog, Ste20	ste16	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC12C2.02c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC13E7.06	msd1	part_of	GO:1990811	PMID:25987607	IPI		C	microtubule-anchoring factor Msd1	mug172	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC13E7.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC146.07	prp2	part_of	GO:0089701	PMID:26215567	IPI		C	U2 small nuclear RNA auxiliary factor small subunit, U2AF-59	mis11|ods1|uaf1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC146.07
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC146.09c	lsd1	part_of	GO:0033193	PMID:17434129	IPI		C	histone demethylase SWIRM1	saf110|swm1	protein	NCBITaxon:4896	20260108	ComplexPortal		PomBase:SPBC146.09c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC14C8.01c	cut2	part_of	GO:1990520	PMID:8978688	IPI		C	sister chromatid separation inhibitor, securin	SPBC1815.02c	protein	NCBITaxon:4896	20251211	ComplexPortal		PomBase:SPBC14C8.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC14C8.06	arc1	part_of	GO:0005885	PMID:16087707	IPI		C	ARP2/3 actin-organizing complex WD repeat subunit Sop2	sop2	protein	NCBITaxon:4896	20250813	ComplexPortal		PomBase:SPBC14C8.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC14C8.12	rpb8	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase I, II and III subunit Rpb8		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC14C8.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC14C8.12	rpb8	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I, II and III subunit Rpb8		protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPBC14C8.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC14C8.17c	spt8	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex WD repeat subunit Spt8	sep9	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC14C8.17c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1685.15c	klp6	part_of	GO:0005871	PMID:11967147	IPI		C	kinesin-8 family plus-end directed microtubule motor Klp6	SPBC649.01c|sot2	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC1685.15c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC16D10.09	pcn1	part_of	GO:0043626	PMID:8663159	IPI		C	PCNA	pcn	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC16D10.09
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC16D10.10	tad2	part_of	GO:0052718	PMID:17875641	IPI		C	tRNA specific adenosine-34 deaminase subunit Tad2		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC16D10.10
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC16H5.02	pfk1	part_of	GO:0005945	PMID:17643314	IPI		C	6-phosphofructokinase pfk1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC16H5.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC16H5.15	gem8	part_of	GO:0032797	PMID:33754639	IPI		C	SMN complex subunit Gem8		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC16H5.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1703.02	rsc9	part_of	GO:0016586	PMID:18622392	IPI		C	RSC complex subunit Rsc9		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC1703.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1718.03	ker1	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I complex subunit Ker1		protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPBC1718.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1734.08	hse1	part_of	GO:0033565	PMID:17951524	IPI		C	ESCRT 0 complex subunit, sorting receptor for ubiquitinated membrane proteins, Hse1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC1734.08
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1734.15	rsc4	part_of	GO:0016586	PMID:18622392	IPI		C	RSC complex bromodomain subunit Rsc4	brd1	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC1734.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1778.04	spo6	part_of	GO:0031431	PMID:11739743	IPI		C	Spo4-Spo6 kinase complex regulatory subunit Spo6		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC1778.04
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1778.05c	lam2	part_of	GO:0071986	PMID:29199950	IPI		C	Ragulator complex Rag GEF subunit		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC1778.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1778.08c	arc3	part_of	GO:0005885	PMID:16087707	IPI		C	ARP2/3 actin-organizing complex subunit Arc21	arc18|arc21	protein	NCBITaxon:4896	20250813	ComplexPortal		PomBase:SPBC1778.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC17D11.06	spp2	part_of	GO:0005658	PMID:14766746	IPI		C	DNA primase large subunit Spp2	pri2	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC17D11.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1921.07c	sgf29	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex subunit Sgf29	SPBC21D10.13	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC1921.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC19C2.03	rpc10	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase I, II and III subunit Rpc10	rpb12	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC19C2.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC19C2.03	rpc10	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I, II and III subunit Rpc10	rpb12	protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPBC19C2.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC19C2.09	sre1	part_of	GO:0032936	PMID:27811944	IPI		C	DNA-binding transcription factor, sterol regulatory element binding protein Sre1		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC19C2.09
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC19C2.13c	ctu2	part_of	GO:0002144	PMID:18391219	IPI		C	cytosolic tRNA-uridine 2-sulfurtransferase subunit Ctu2		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC19C2.13c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC1A4.01	apc10	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex substrate recognition subunit Apc10	SPBC1E8.06	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPBC1A4.01
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC20F10.04c	nse4	part_of	GO:0030915	PMID:16478984	IPI		C	Smc5-6 complex non-SMC delta-kleisin subunit Nse4	rad62	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC20F10.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC20F10.06	mad2	part_of	GO:0033597	PMID:22437499	IPI		C	mitotic spindle checkpoint protein Mad2		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC20F10.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC20F10.09	lsm5	part_of	GO:0120115	PMID:32518066	IPI		C	Lsm2-8 complex subunit Lsm5		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC20F10.09
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC211.04c	mcm6	part_of	GO:0042555	PMID:10770926	IPI		C	MCM complex subunit Mcm6	mis5	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC211.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC215.15	sec13	part_of	GO:0061700	PMID:33534698	IPI		C	GATOR2-SEACAT complex/COPII-coated vesicle component/nuclear pore outer ring WD repeat protein Sec13		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC215.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC216.05	rad3	part_of	GO:0070310	PMID:10559981	IPI		C	ATR checkpoint kinase Rad3		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC216.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC216.07c	tor2	part_of	GO:0031931	PMID:18076573	IPI		C	TORC1 serine/threonine protein kinase Tor2	SPBC646.01c	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC216.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC21B10.05c	wat1	part_of	GO:0031931	PMID:18076573	IPI		C	TORC1/2 complex WD repeat protein Wat1/Lst8	lst8|pop3	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC21B10.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC21B10.05c	wat1	part_of	GO:0031932	PMID:22645648	IPI		C	TORC1/2 complex WD repeat protein Wat1/Lst8	lst8|pop3	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC21B10.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC21C3.16c	spt4	part_of	GO:0032044	PMID:19460865	IPI		C	DSIF transcription elongation factor complex subunit Spt4		protein	NCBITaxon:4896	20251211	ComplexPortal		PomBase:SPBC21C3.16c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC21C3.18	spo4	part_of	GO:0031431	PMID:11739743	IPI		C	serine/threonine protein kinase (DDK family) Spo4		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC21C3.18
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC21H7.02	taf10	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex/transcription factor TFIID complex subunit Taf10		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC21H7.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC25B2.01	hbs1	part_of	GO:1990533	PMID:20890290	IPI		C	Dom34-Hbs1 translation release factor complex GTPase subunit Hbs1	SPBC2G5.08	protein	NCBITaxon:4896	20251001	ComplexPortal		PomBase:SPBC25B2.01
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC25D12.03c	mcm7	part_of	GO:0042555	PMID:10770926	IPI		C	MCM complex subunit Mcm7		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC25D12.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC25H2.11c	spt7	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex bromodomain subunit Spt7		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC25H2.11c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC26H8.04c	iml1	part_of	GO:1990130	PMID:33534698	IPI		C	GATOR1-SEACIT GTPase activating complex subunit Iml1		protein	NCBITaxon:4896	20251213	ComplexPortal		PomBase:SPBC26H8.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC26H8.09c	snf59	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF complex subunit Snf59		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC26H8.09c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC27.02c	ask1	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Ask1	mug181	protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPBC27.02c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC27B12.02	mis19	part_of	GO:0098654	PMID:24774534	IPI		C	kinetochore protein Mis19/Eic1	SPBC30B4.10|eic1|kis1	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC27B12.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC28E12.01c	apc13	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex TPR lobe accessory factor Apc13	SPBC9B6.12c	protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPBC28E12.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC28F2.07	sfr1	part_of	GO:0032798	PMID:16921379	IPI		C	DNA recombination mediator Sfr1	dds20|mug13	protein	NCBITaxon:4896	20241126	ComplexPortal		PomBase:SPBC28F2.07
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC28F2.10c	ngg1	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex subunit Ngg1/Ada3	ada3|kap1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC28F2.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC28F2.12	rpb1	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase II complex large subunit Rpb1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC28F2.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC29A10.03c	pcf1	part_of	GO:0033186	PMID:25313826	IPI		C	histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit A Pcf1	SPBC365.19c|rlf2	protein	NCBITaxon:4896	20251213	ComplexPortal		PomBase:SPBC29A10.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC29A10.04	psm1	part_of	GO:0030892	PMID:11069892	IPI		C	mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1	smc1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC29A10.04
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC29A10.15	orc1	part_of	GO:0005664	PMID:10535928	IPI		C	origin recognition complex subunit Orc1	cdc30|orp1|rid1	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC29A10.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC29A10.17	lam1	part_of	GO:0071986	PMID:29199950	IPI		C	Ragulator complex subunit, human LAMTOR1 ortholog		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC29A10.17
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC29B5.01	atf1	part_of	GO:1990243	PMID:9391101	IPI		C	DNA-binding pioneer transcription factor, Atf-CREB family Atf1	gad7|mts1|sss1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC29B5.01
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC2A9.12	orc6	part_of	GO:0005664	PMID:10535928	IPI		C	origin recognition complex subunit Orc6	SPBC2D10.02	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC2A9.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC2F12.13	klp5	part_of	GO:0005871	PMID:11967147	IPI		C	kinesin-8 family plus-end directed microtubule motor Klp5	sot1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC2F12.13
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC2G5.02c	ckb2	part_of	GO:0005956	PMID:25410910	IPI		C	CK2 regulatory subunit beta isoform 2, Ckb2		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC2G5.02c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC2G5.03	ctu1	part_of	GO:0002144	PMID:18391219	IPI		C	cytosolic tRNA-uridine 2-sulfurtransferase subunit Ctu1		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC2G5.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC30B4.04c	sol1	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF complex subunit Sol1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC30B4.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC30D10.06	lsm4	part_of	GO:0120115	PMID:32518066	IPI		C	Lsm2-8 complex subunit Lsm4		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC30D10.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC30D10.10c	tor1	part_of	GO:0031932	PMID:22645648	IPI		C	TORC2 serine/threonine protein kinase Tor1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC30D10.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC31F10.16	bch1	part_of	GO:0034044	PMID:27974503	IPI		C	exomer complex ChAPs family (Chs5p-Arf1p-binding) protein Bch1	bch2|cfp1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC31F10.16
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC32F12.06	pch1	part_of	GO:0070691	PMID:12475973	IPI		C	P-TEFB associated cyclin, cyclin T Pch1		protein	NCBITaxon:4896	20260109	ComplexPortal		PomBase:SPBC32F12.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC32F12.08c	duo1	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Duo1		protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPBC32F12.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC32F12.16	gem7	part_of	GO:0032797	PMID:33754639	IPI		C	SMN complex subunit Gem7	new17	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC32F12.16
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC32H8.09	wdr8	part_of	GO:1990811	PMID:25987607	IPI		C	mitosis-specific spindle pole body WD repeat protein Wdr8		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC32H8.09
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC32H8.10	cdk9	part_of	GO:0070691	PMID:12475973	IPI		C	P-TEFb-associated cyclin-dependent protein kinase Cdk9		protein	NCBITaxon:4896	20260109	ComplexPortal		PomBase:SPBC32H8.10
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC337.13c	gtr1	part_of	GO:1990131	PMID:29199950	IPI		C	RagA/B GTPase Gtr1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC337.13c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC337.14	rpb4	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase II complex subunit Rpb4		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC337.14
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC36.05c	clr6	part_of	GO:0032221	PMID:37076472	IPI		C	histone deacetylase (class I) H3-K9 specific complex subunit Clr6		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC36.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC3B9.07c	rpa43	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I complex subunit Rpa43	rpa21	protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPBC3B9.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC3B9.15c	scp1	part_of	GO:0032936	PMID:27811944	IPI		C	Sre1 cleavage activating protein, Scap Scp1	scap	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC3B9.15c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC3B9.21	dcp1	part_of	GO:0098745	PMID:27183195	IPI		C	mRNA decapping complex regulatory subunit Dcp1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC3B9.21
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC3B9.22c	dad4	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Dad4		protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPBC3B9.22c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC4.04c	mcm2	part_of	GO:0042555	PMID:10770926	IPI		C	MCM complex subunit Mcm2	cdc19|nda1	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC4.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC409.03	swi5	part_of	GO:0032798	PMID:16921379	IPI		C	DNA recombination mediator Swi5		protein	NCBITaxon:4896	20241126	ComplexPortal		PomBase:SPBC409.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC409.03	swi5	part_of	GO:0034974	PMID:14663140	IPI		C	DNA recombination mediator Swi5		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC409.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC409.12c	stn1	part_of	GO:1990879	PMID:20008938	IPI		C	telomere cap complex subunit Stn1		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC409.12c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC428.13c	mob1	part_of	GO:0034973	PMID:10769201	IPI		C	Sid2-Mob1 kinase complex regulatory subunit Mob1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC428.13c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC4B4.03	rsc1	part_of	GO:0016586	PMID:18622392	IPI		C	RSC complex bromodomain subunit Rsc1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBC4B4.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC4C3.05c	nuc1	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I complex large subunit Nuc1	rpa1|rpa190	protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPBC4C3.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC543.04	npr3	part_of	GO:1990130	PMID:33534698	IPI		C	GATOR1-SEACIT GTPase activating complex subunit Npr3		protein	NCBITaxon:4896	20251213	ComplexPortal		PomBase:SPBC543.04
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC609.05	pob3	part_of	GO:0035101	PMID:17614284	IPI		C	histone H2A-H2B chaperone, FACT complex subunit Pob3		protein	NCBITaxon:4896	20251211	ComplexPortal		PomBase:SPBC609.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC646.14c	orc5	part_of	GO:0005664	PMID:10535928	IPI		C	origin recognition complex subunit Orc5		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC646.14c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC660.07	ntp1	part_of	GO:0005946	PMID:12153582	IPI		C	alpha,alpha-trehalase Ntp1		protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPBC660.07
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC660.13c	ssb1	part_of	GO:0005662	PMID:8702843	IPI		C	DNA replication factor A subunit Ssb1	rad11|rpa1|rpa70	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC660.13c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC685.09	orc2	part_of	GO:0005664	PMID:10535928	IPI		C	origin recognition complex subunit Orc2	orp2	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC685.09
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC6B1.12c	sus1	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex deubiquitinating submodule subunit, TREX complex subunit Sus1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC6B1.12c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC776.12c	hsk1	part_of	GO:0031431	PMID:10409743	IPI		C	Dbf4(Dfp1)-dependent protein kinase Hsk1	cdc7	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC776.12c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC776.16	mis20	part_of	GO:0098654	PMID:24774534	IPI		C	centromere protein Mis20/Eic2	eic2	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC776.16
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC83.03c	tas3	part_of	GO:0030958	PMID:14704433	IPI		C	RITS complex subunit 3		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPBC83.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC83.04	apc15	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex platform subcomplex scaffold subunit Apc15		protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPBC83.04
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC887.18c	hfi1	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex subunit Hfi1/Ada1	ada1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC887.18c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC947.10	dsc1	part_of	GO:0044695	PMID:23760507	IPI		C	Golgi Dsc E3 ligase complex subunit Dsc1		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBC947.10
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBC9B6.05c	lsm3	part_of	GO:0120115	PMID:32518066	IPI		C	Lsm2-8 complex subunit Lsm3		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC9B6.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP16F5.03c	tra1	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex, phosphatidylinositol pseudokinase subunit Tra1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBP16F5.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP18G5.03	toc1	part_of	GO:0031931	PMID:18076573	IPI		C	TORC1 complex Tor2 interacting protein 1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBP18G5.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP23A10.04	apc2	part_of	GO:0005680	PMID:12477395	IPI		C	anaphase-promoting complex cullin family subunit Apc2		protein	NCBITaxon:4896	20251230	ComplexPortal		PomBase:SPBP23A10.04
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP23A10.05	ssr4	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Ssr4		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBP23A10.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP23A10.05	ssr4	part_of	GO:0016586	PMID:18622392	IPI		C	SWI/SNF and RSC complex subunit Ssr4		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBP23A10.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP23A10.07	rpa2	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I complex subunit Rpa2		protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPBP23A10.07
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP23A10.13	orc4	part_of	GO:0005664	PMID:10535928	IPI		C	origin recognition complex subunit Orc4	orp4	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBP23A10.13
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP35G2.08c	air1	part_of	GO:0031499	PMID:17512405	IPI		C	TRAMP complex zinc knuckle subunit Air1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBP35G2.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP4H10.04	ppb1	part_of	GO:0005955	PMID:15657058	IPI		C	serine/threonine protein phosphatase PP2B (calcineurin A) catalytic subunit Ppb1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPBP4H10.04
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBP8B7.19	spt16	part_of	GO:0035101	PMID:17614284	IPI		C	histone H2A-H2B chaperone, FACT complex subunit Spt16		protein	NCBITaxon:4896	20251211	ComplexPortal		PomBase:SPBP8B7.19
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPBPJ4664.01	dps1	part_of	GO:0032478	PMID:14519123	IPI		C	decaprenyl diphosphate synthase subunit Dps1/Coq1	SPBPJ694.01|coq1	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPBPJ4664.01
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1020.04c	rpb6	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase I, II and III subunit Rpb6	rpo15	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC1020.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1020.04c	rpb6	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase I, II and III subunit Rpb6	rpo15	protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPCC1020.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1183.05c	lig4	part_of	GO:0032807	PMID:24847916	IPI		C	DNA repair ligase Lig4		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC1183.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC11E10.07c	gcn3	part_of	GO:0005851	PMID:26901872	IPI		C	translation initiation factor eIF2B alpha subunit Gcn3	tif221	protein	NCBITaxon:4896	20260109	ComplexPortal		PomBase:SPCC11E10.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1223.15c	spc19	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Spc19		protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPCC1223.15c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1259.03	rpa12	part_of	GO:0005736	PMID:33536435	IPI		C	DNA-directed RNA polymerase complex I TFIIS subunit Rpa12		protein	NCBITaxon:4896	20250715	ComplexPortal		PomBase:SPCC1259.03
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC126.04c	sgf73	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex deubiquitinating submodule subunit Sgf73		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC126.04c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1281.05	rsc7	part_of	GO:0016586	PMID:18622392	IPI		C	RSC complex subunit Rsc7		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC1281.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1322.12c	bub1	part_of	GO:1990298	PMID:22660415	IPI		C	mitotic spindle checkpoint kinase Bub1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC1322.12c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1393.14	ten1	part_of	GO:1990879	PMID:20008938	IPI		C	telomere cap complex subunit Ten1		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC1393.14
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1442.10c	rpb3	part_of	GO:0005665	PMID:19458260	IPI		C	DNA-directed RNA polymerase II complex subunit Rpb3		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC1442.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC162.12	tco89	part_of	GO:0031931	PMID:18076573	IPI		C	TORC1 subunit Tco89	SPCC1753.06c	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC162.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1620.01c	lsm2	part_of	GO:0120115	PMID:32518066	IPI		C	Lsm2-8 complex subunit Lsm2		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC1620.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1620.14c	snf22	part_of	GO:0016514	PMID:18622392	IPI		C	SWI/SNF ATP-dependent chromatin remodeler Snf22	SPCC830.01c	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC1620.14c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1672.10	mis16	part_of	GO:0098654	PMID:24774534	IPI		C	histone H4 chaperone, CENP-A recruiting complex CENP-A chaperone, WD repeat subunit Mis16		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPCC1672.10
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1682.02c	mcm3	part_of	GO:0042555	PMID:10770926	IPI		C	MCM complex subunit Mcm3		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC1682.02c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC16A11.14	sfh1	part_of	GO:0016586	PMID:18622392	IPI		C	RSC complex subunit Sfh1		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC16A11.14
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC16A11.17	mcm4	part_of	GO:0042555	PMID:10770926	IPI		C	MCM complex subunit Mcm4/Cdc21	SPCC24B10.01|cdc21|rid2	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC16A11.17
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC16C4.18c	taf6	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex/transcription factor TFIID complex histone H4-like subunit Taf6	taf50	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC16C4.18c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1753.01c	ssb2	part_of	GO:0005662	PMID:8702843	IPI		C	single-stranded DNA binding protein Ssb2	SPCC584.06c|rpa2	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPCC1753.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1795.01c	mad3	part_of	GO:0033597	PMID:22437499	IPI		C	mitotic spindle checkpoint protein Mad3	SPCC895.02	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC1795.01c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC18.06c	caf1	part_of	GO:0030015	PMID:27851962	IPI		C	CCR4-Not complex CAF1 family ribonuclease subunit 7/8	pop2	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC18.06c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1840.10	lsm8	part_of	GO:0120115	PMID:32518066	IPI		C	Lsm2-8 complex subunit Lsm8		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC1840.10
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC18B5.06	dom34	part_of	GO:1990533	PMID:20890290	IPI		C	Dom34-Hbs1 translation release factor complex subunit, peloto ortholog Dom34		protein	NCBITaxon:4896	20251001	ComplexPortal		PomBase:SPCC18B5.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1919.03c	amk2	part_of	GO:0031588	PMID:17937917	IPI		C	serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC1919.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC1919.15	brl1	part_of	GO:0033503	PMID:17363370	IPI		C	histone H2B-K119 ubiquitin ligase complex (HULC) subunit, ubiquitin-protein ligase E3 Brl1	SPCC790.01|rfp2	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC1919.15
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC23B6.05c	ssb3	part_of	GO:0005662	PMID:8702843	IPI		C	DNA replication factor A subunit Ssb3	rpa3	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPCC23B6.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC24B10.08c	ada2	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex subunit Ada2		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC24B10.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC285.11	dsc5	part_of	GO:0044695	PMID:23760507	IPI		C	UBX domain Sre1 cleavage protein	ucp10	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPCC285.11
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC285.12	lsm7	part_of	GO:0120115	PMID:32518066	IPI		C	Lsm2-8 complex subunit Lsm7		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC285.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC31H12.08c	ccr4	part_of	GO:0030015	PMID:27851962	IPI		C	CCR4-Not complex deadenylase subunit, Ccr4	SPCC5E4.02c|not6	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC31H12.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC338.17c	rad21	part_of	GO:0030892	PMID:11069892	IPI		C	mitotic cohesin complex kleisin subunit Rad21		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC338.17c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC417.02	dad5	part_of	GO:0042729	PMID:16079914	IPI		C	DASH complex subunit Dad5	hos3|hsk3	protein	NCBITaxon:4896	20251229	ComplexPortal		PomBase:SPCC417.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC4G3.05c	mus81	part_of	GO:0048476	PMID:17363897	IPI		C	Holliday junction resolvase subunit Mus81	slx3	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC4G3.05c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC4G3.07c	phf1	part_of	GO:0033193	PMID:17434129	IPI		C	PHD finger protein Phf1	saf50|swp1	protein	NCBITaxon:4896	20260108	ComplexPortal		PomBase:SPCC4G3.07c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC4G3.15c	not2	part_of	GO:0030015	PMID:27851962	IPI		C	CCR4-Not complex NOT box subunit 2		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC4G3.15c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC550.05	nse1	part_of	GO:0030915	PMID:16478984	IPI		C	Smc5-6 complex ubiquitin-protein ligase E3 subunit Nse1		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC550.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC550.13	dfp1	part_of	GO:0031431	PMID:10409743	IPI		C	Hsk1-Dfp1 kinase complex regulatory subunit Dfp1	dbf4|him1|rad35	protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPCC550.13
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC553.09c	spb70	part_of	GO:0005658	PMID:14766746	IPI		C	DNA polymerase alpha B-subunit	pol12	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC553.09c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC584.04	sup35	part_of	GO:0018444	PMID:19417105	IPI		C	cytoplasmic translation release factor class II, GTPase eRF3	erf3|sup9	protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC584.04
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC5E4.03c	taf5	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex/TATA-binding protein associated factor/transcription factor TFIID complex WD repeat subunit Taf5	taf72	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC5E4.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC5E4.04	cut1	part_of	GO:1990520	PMID:8978688	IPI		C	separase/separin	ptr4	protein	NCBITaxon:4896	20251211	ComplexPortal		PomBase:SPCC5E4.04
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC5E4.06	smc6	part_of	GO:0030915	PMID:16478984	IPI		C	Smc5-6 complex SMC P-loop ATPase subunit Smc6	rad18	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC5E4.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC61.02	spt3	part_of	GO:0000124	PMID:19056896	IPI		C	SAGA complex subunit Spt3		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC61.02
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC645.04	nse3	part_of	GO:0030915	PMID:16478984	IPI		C	Smc5-6 complex non-SMC MAGE family subunit Nse3		protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC645.04
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC736.11	ago1	part_of	GO:0030958	PMID:14704433	IPI		C	argonaute	csp9	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC736.11
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC736.11	ago1	part_of	GO:0033167	PMID:17310250	IPI		C	argonaute	csp9	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC736.11
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC74.03c	ssp2	part_of	GO:0031588	PMID:17937917	IPI		C	serine/threonine protein kinase AMPK catalytic (alpha) subunit Ssp2	ucp9	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC74.03c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC777.05	gtr2	part_of	GO:1990131	PMID:29199950	IPI		C	RagC/D GTPase Gtr2		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC777.05
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC777.08c	bit61	part_of	GO:0031932	PMID:22645648	IPI		C	Protor homolog, Bit61		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC777.08c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC830.06	cnb1	part_of	GO:0005955	PMID:15657058	IPI		C	serine/threonine protein phosphatase PP2B (calcineurin B) regulatory subunit		protein	NCBITaxon:4896	20240827	ComplexPortal		PomBase:SPCC830.06
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC970.10c	brl2	part_of	GO:0033503	PMID:17363370	IPI		C	histone H2B-K119 ubiquitin ligase complex (HULC) subunit, ubiquitin-protein ligase E3 Brl2	rfp1	protein	NCBITaxon:4896	20241210	ComplexPortal		PomBase:SPCC970.10c
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `PomBase	SPCC970.12	mis18	part_of	GO:0098654	PMID:24774534	IPI		C	kinetochore protein Mis18		protein	NCBITaxon:4896	20250404	ComplexPortal		PomBase:SPCC970.12
`
* WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `ComplexPortal	CPX-25780	rdrc_schpo	enables	GO:0003968	PMID:15607976	IPI		F	RNA-directed RNA polymerase complex	cid12:hrr1:rdp1|RDR complex	protein_complex	taxon:284812	20241210	ComplexPortal		
`
### gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

* total: 79
#### Messages
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006528) -- `PomBase	SPAC186.03	SPAC186.03	involved_in	GO:0006528	GO_REF:0000002	IEA	InterPro:IPR004550	P	L-asparaginase		protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPAC186.03
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006528) -- `PomBase	SPAC26A3.11	SPAC26A3.11	involved_in	GO:0006528	GO_REF:0000033	IBA	PANTHER:PTN000557480|UniProtKB:Q9NQR4	P	mitochondrial omega-amidase		protein	NCBITaxon:4896	20171130	GO_Central		PomBase:SPAC26A3.11
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006528) -- `PomBase	SPAC977.12	SPAC977.12	involved_in	GO:0006528	GO_REF:0000002	IEA	InterPro:IPR004550	P	L-asparaginase		protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPAC977.12
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006528) -- `PomBase	SPBPB21E7.09	SPBPB21E7.09	involved_in	GO:0006528	GO_REF:0000002	IEA	InterPro:IPR004550	P	L-asparaginase	SPAPB21E7.09	protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPBPB21E7.09
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006528) -- `PomBase	SPBPB8B6.05c	SPBPB8B6.05c	involved_in	GO:0006528	GO_REF:0000002	IEA	InterPro:IPR004550	P	L-asparaginase		protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPBPB8B6.05c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006568) -- `PomBase	SPAC19A8.15	trp2	involved_in	GO:0006568	GO_REF:0000002	IEA	InterPro:IPR002028|InterPro:IPR006653|InterPro:IPR006654	P	tryptophan synthase		protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPAC19A8.15
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006568) -- `PomBase	SPBC1539.09c	trp1	involved_in	GO:0006568	GO_REF:0000002	IEA	InterPro:IPR001240|InterPro:IPR001468	P	phosphoribosylanthranilate isomerase/indole-3-glycerol-phosphate synthase/unknown aminotransferase, multifunctional enzyme Trp1		protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPBC1539.09c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPAC13F5.06c	sec10	involved_in	GO:0006904	PMID:39330374	NAS		P	exocyst complex subunit Exo5	Exo5	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC13F5.06c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPAC16A10.03c	SPAC16A10.03c	involved_in	GO:0006904	GO_REF:0000033	IBA	PANTHER:PTN000595174|SGD:S000004138	P	ubiquitin-protein ligase E3 involved in vesicle docking Pep5/Vps11-like		protein	NCBITaxon:4896	20170228	GO_Central		PomBase:SPAC16A10.03c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPAC17G8.12	sec3	involved_in	GO:0006904	PMID:39330374	NAS		P	exocyst complex subunit Exo1	exo1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC17G8.12
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPAC6F12.08c	exo8	involved_in	GO:0006904	PMID:39330374	NAS		P	exocyst complex subunit Exo8	exo84	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAC6F12.08c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPAC823.12	vps11	involved_in	GO:0006904	GO_REF:0000033	IBA	PANTHER:PTN000595174|SGD:S000004138	P	HOPs/CORVET complex ubiquitin protein ligase E3 subunit Vps11	pep5	protein	NCBITaxon:4896	20170228	GO_Central		PomBase:SPAC823.12
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPBC106.20	exo70	involved_in	GO:0006904	PMID:39330374	NAS		P	exocyst complex subunit Exo7	SPBC582.02|exo7	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC106.20
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPCC1183.01	sec15	involved_in	GO:0006904	PMID:39330374	NAS		P	exocyst complex subunit Exo6	SPCC1672.13|exo6	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC1183.01
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPCC1235.10c	sec6	involved_in	GO:0006904	PMID:39330374	NAS		P	exocyst complex subunit Exo3	exo3	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC1235.10c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPCC584.05	sec1	involved_in	GO:0006904	GO_REF:0000033	IBA	MGI:MGI:107363|PANTHER:PTN000187656|SGD:S000002571|WB:WBGene00006757|dictyBase:DDB_G0283937	P	SNARE binding protein Sec1		protein	NCBITaxon:4896	20230602	GO_Central		PomBase:SPCC584.05
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPCC622.10c	sec5	involved_in	GO:0006904	PMID:39330374	NAS		P	exocyst complex subunit Exo2	exo2	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC622.10c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPCC790.02	pep3	involved_in	GO:0006904	GO_REF:0000033	IBA	PANTHER:PTN000595174|SGD:S000004138	P	HOPS/CORVET complex ubiquitin-protein ligase E3 subunit Pep3/Vps18	vps18	protein	NCBITaxon:4896	20170228	GO_Central		PomBase:SPCC790.02
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `PomBase	SPCC970.09	sec8	involved_in	GO:0006904	PMID:39330374	NAS		P	exocyst complex subunit Exo4	exo4	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCC970.09
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006904) -- `ComplexPortal	CPX-26496	exocyst_schpo	involved_in	GO:0006904	PMID:39330374	NAS		P	Exocyst complex	EXO70:EXO84:SEC3:SEC5:SEC6:SEC8:SEC10:SEC15	protein_complex	taxon:284812	20250828	ComplexPortal		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0019912) -- `PomBase	SPAC1D4.06c	csk1	involved_in	GO:0007165	PMID:10226032	IC	GO:0019912	P	cyclin-dependent kinase activating kinase Csk1		protein	NCBITaxon:4896	20090506	PomBase		PomBase:SPAC1D4.06c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0048211) -- `PomBase	SPAC29E6.03c	uso1	involved_in	GO:0048211	GO_REF:0000033	IBA	PANTHER:PTN000000707|SGD:S000002216	P	ER to Golgi tether Uso1	SPAC30.07c	protein	NCBITaxon:4896	20170228	GO_Central		PomBase:SPAC29E6.03c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0048278) -- `PomBase	SPAC6F12.03c	fsv1	involved_in	GO:0048278	GO_REF:0000033	IBA	MGI:MGI:109355|MGI:MGI:1930705|PANTHER:PTN000461349|RGD:621019|RGD:69430|SGD:S000005632	P	endosomal t-SNARE Stx8	stx8|syn8	protein	NCBITaxon:4896	20200808	GO_Central		PomBase:SPAC6F12.03c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0048278) -- `PomBase	SPAC823.05c	tlg2	involved_in	GO:0048278	GO_REF:0000033	IBA	MGI:MGI:109355|MGI:MGI:1930705|PANTHER:PTN000461349|RGD:621019|RGD:69430|SGD:S000005632	P	late Golgi membrane t-SNARE, Tlg2		protein	NCBITaxon:4896	20200808	GO_Central		PomBase:SPAC823.05c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0048278) -- `PomBase	SPBC31E1.04	pep12	involved_in	GO:0048278	GO_REF:0000033	IBA	MGI:MGI:109355|MGI:MGI:1930705|PANTHER:PTN000461349|RGD:621019|RGD:69430|SGD:S000005632	P	vacuolar membrane t-SNARE Pep12		protein	NCBITaxon:4896	20200808	GO_Central		PomBase:SPBC31E1.04
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0048278) -- `PomBase	SPBC36B7.07	tlg1	involved_in	GO:0048278	GO_REF:0000033	IBA	MGI:MGI:109355|MGI:MGI:1930705|PANTHER:PTN000461349|RGD:621019|RGD:69430|SGD:S000005632	P	late Golgi membrane t-SNARE Tlg1		protein	NCBITaxon:4896	20200808	GO_Central		PomBase:SPBC36B7.07
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0048278) -- `PomBase	SPBC8D2.14c	sed5	involved_in	GO:0048278	GO_REF:0000033	IBA	MGI:MGI:109355|MGI:MGI:1930705|PANTHER:PTN000461349|RGD:621019|RGD:69430|SGD:S000005632	P	cis-Golgi t-SNARE Sed5		protein	NCBITaxon:4896	20200808	GO_Central		PomBase:SPBC8D2.14c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0048278) -- `PomBase	SPCC594.06c	vsl1	involved_in	GO:0048278	GO_REF:0000033	IBA	MGI:MGI:109355|MGI:MGI:1930705|PANTHER:PTN000461349|RGD:621019|RGD:69430|SGD:S000005632	P	vacuolar membrane t-SNARE Vsl1/Vam7	vam7	protein	NCBITaxon:4896	20200808	GO_Central		PomBase:SPCC594.06c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0048278) -- `PomBase	SPCC825.03c	psy1	involved_in	GO:0048278	GO_REF:0000033	IBA	MGI:MGI:109355|MGI:MGI:1930705|PANTHER:PTN000461349|RGD:621019|RGD:69430|SGD:S000005632	P	plasma membrane and forespore membrane t-SNARE Psy1	sso1	protein	NCBITaxon:4896	20200808	GO_Central		PomBase:SPCC825.03c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0061817) -- `PomBase	SPAC17C9.12	scs22	involved_in	GO:0061817	GO_REF:0000033	IBA	PANTHER:PTN000087323|PomBase:SPAC17C9.12|PomBase:SPBC16G5.05c|UniProtKB:Q9P0L0	P	VAP family protein Scs22		protein	NCBITaxon:4896	20231108	GO_Central		PomBase:SPAC17C9.12
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0061817) -- `PomBase	SPAC17C9.12	scs22	involved_in	GO:0061817	GO_REF:0000117	IEA	ARBA:ARBA00090694	P	VAP family protein Scs22		protein	NCBITaxon:4896	20260428	UniProt		PomBase:SPAC17C9.12
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0061817) -- `PomBase	SPAC3H5.09c	hob2	enables	GO:0043495	PMID:34415038	TAS		F	ER-PM contact site phospholipid-binding protein Hob2		protein	NCBITaxon:4896	20210823	PomBase	part_of(GO:0061817)	PomBase:SPAC3H5.09c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0061817) -- `PomBase	SPAPYUK71.03c	tcb3	involved_in	GO:0061817	GO_REF:0000002	IEA	InterPro:IPR017147|InterPro:IPR037756|InterPro:IPR037761|InterPro:IPR037762|InterPro:IPR037765	P	tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb3	syn1	protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPAPYUK71.03c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0061817) -- `PomBase	SPBC16G5.05c	scs2	involved_in	GO:0061817	GO_REF:0000033	IBA	PANTHER:PTN000087323|PomBase:SPAC17C9.12|PomBase:SPBC16G5.05c|UniProtKB:Q9P0L0	P	VAP family protein Scs2		protein	NCBITaxon:4896	20231108	GO_Central		PomBase:SPBC16G5.05c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0061817) -- `PomBase	SPBC16G5.05c	scs2	involved_in	GO:0061817	GO_REF:0000117	IEA	ARBA:ARBA00090694	P	VAP family protein Scs2		protein	NCBITaxon:4896	20260428	UniProt		PomBase:SPBC16G5.05c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0061817) -- `PomBase	SPCC962.01	tcb1	involved_in	GO:0061817	GO_REF:0000002	IEA	InterPro:IPR017147|InterPro:IPR037762	P	tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb1	SPCP31B10.09	protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPCC962.01
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0061817) -- `PomBase	SPCP31B10.06	tcb2	involved_in	GO:0061817	GO_REF:0000002	IEA	InterPro:IPR037765	P	tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb2	mug190	protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPCP31B10.06
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0090522) -- `PomBase	SPCC1183.01	sec15	involved_in	GO:0090522	GO_REF:0000002	IEA	InterPro:IPR007225	P	exocyst complex subunit Exo6	SPCC1672.13|exo6	protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPCC1183.01
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0090522) -- `PomBase	SPCC970.09	sec8	involved_in	GO:0090522	GO_REF:0000002	IEA	InterPro:IPR039682	P	exocyst complex subunit Exo4	exo4	protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPCC970.09
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1901607) -- `PomBase	SPAC1039.08	soa1	involved_in	GO:1901607	GO_REF:0000117	IEA	ARBA:ARBA00026974	P	serine O-acetyltransferase		protein	NCBITaxon:4896	20260428	UniProt		PomBase:SPAC1039.08
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1901607) -- `PomBase	SPAC17H9.13c	pro2	involved_in	GO:1901607	GO_REF:0000117	IEA	ARBA:ARBA00026974	P	glutamate 5-kinase Pro2		protein	NCBITaxon:4896	20260428	UniProt		PomBase:SPAC17H9.13c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1901607) -- `PomBase	SPAC4G9.09c	arg11	involved_in	GO:1901607	GO_REF:0000117	IEA	ARBA:ARBA00026974	P	N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase		protein	NCBITaxon:4896	20260428	UniProt		PomBase:SPAC4G9.09c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1901607) -- `PomBase	SPBC1271.14	aga1	involved_in	GO:1901607	GO_REF:0000117	IEA	ARBA:ARBA00026974	P	acetyl-CoA:L-glutamate N-acetyltransferase	arg7	protein	NCBITaxon:4896	20260428	UniProt		PomBase:SPBC1271.14
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1990456) -- `PomBase	SPAC17H9.17c	mdm10	involved_in	GO:1990456	GO_REF:0000033	IBA	PANTHER:PTN001997910|SGD:S000000008	P	ERMES and SAM complex subunit Mdm10		protein	NCBITaxon:4896	20170228	GO_Central		PomBase:SPAC17H9.17c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1990456) -- `PomBase	SPAC17H9.17c	mdm10	involved_in	GO:1990456	GO_REF:0000104	IEA	UniRule:UR000106107	P	ERMES and SAM complex subunit Mdm10		protein	NCBITaxon:4896	20260428	UniProt		PomBase:SPAC17H9.17c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1990456) -- `PomBase	SPBC19C2.11c	mdm34	involved_in	GO:1990456	GO_REF:0000033	IBA	PANTHER:PTN002000077|SGD:S000003187	P	ERMES complex subunit, membrane tether and lipid transfer protein Mdm34		protein	NCBITaxon:4896	20170228	GO_Central		PomBase:SPBC19C2.11c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1990456) -- `PomBase	SPBC27B12.01c	mmm1	involved_in	GO:1990456	GO_REF:0000033	IBA	PANTHER:PTN001003559|SGD:S000003929	P	ERMES complex subunit, membrane tether and lipid transfer protein Mmm1	SPBC30B4.09c	protein	NCBITaxon:4896	20240813	GO_Central		PomBase:SPBC27B12.01c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1990456) -- `PomBase	SPBC28F2.06c	mdm12	involved_in	GO:1990456	GO_REF:0000033	IBA	PANTHER:PTN002000262|SGD:S000005369	P	ERMES complex subunit, membrane tether and lipid transfer protein Mdm12		protein	NCBITaxon:4896	20170228	GO_Central		PomBase:SPBC28F2.06c
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:1990456) -- `PomBase	SPCC320.04c	gem1	involved_in	GO:1990456	GO_REF:0000111	IC	GO:0032865	P	ERMES complex GTPase subunit Gem1		protein	NCBITaxon:4896	20170628	PomBase		PomBase:SPCC320.04c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0000784) -- `PomBase	SPAC6G9.13c	bqt1	enables	GO:0005515	PMID:16615890	IPI	UniProtKB:Q09825	F	bouquet formation protein Bqt1	mug23|rec26	protein	NCBITaxon:4896	20260425	IntAct	occurs_in(GO:0005635)|occurs_in(GO:0005634)|occurs_in(GO:0000784)	PomBase:SPAC6G9.13c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0000784) -- `PomBase	SPBC12D12.01	sad1	enables	GO:0005515	PMID:16615890	IPI	UniProtKB:Q92358	F	spindle pole body SUN domain protein Sad1	SPBC16H5.01c	protein	NCBITaxon:4896	20260425	IntAct	occurs_in(GO:0005635)|occurs_in(GO:0005634)|occurs_in(GO:0000784)	PomBase:SPBC12D12.01
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0003400) -- `PomBase	SPBC31F10.06c	sar1	involved_in	GO:0003400	GO_REF:0000033	IBA	PANTHER:PTN000195056|SGD:S000006139	P	Arf family GTPase Sar1	psr1	protein	NCBITaxon:4896	20180419	GO_Central		PomBase:SPBC31F10.06c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0003400) -- `PomBase	SPBC3H7.01	spo14	involved_in	GO:0003400	GO_REF:0000033	IBA	PANTHER:PTN000590366|SGD:S000000663|SGD:S000005309|UniProtKB:Q9HCU5	P	GEF for Sar1, WD repeat protein Spo14	SPBP16F5.01c|stl1	protein	NCBITaxon:4896	20240731	GO_Central		PomBase:SPBC3H7.01
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0016021) -- `PomBase	SPAC13D6.01	pof14	enables	GO:0005515	PMID:17016471	IPI	UniProtKB:P36596	F	F-box protein Pof14		protein	NCBITaxon:4896	20260425	IntAct	occurs_in(GO:0016021)	PomBase:SPAC13D6.01
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0016021) -- `PomBase	SPBC646.05c	erg9	enables	GO:0005515	PMID:17016471	IPI	UniProtKB:Q10223	F	farnesyldiphosphate:farnesyldiphosphatefarnesyltransferase (squalene synthase) Erg9		protein	NCBITaxon:4896	20260425	IntAct	occurs_in(GO:0016021)	PomBase:SPBC646.05c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0019285) -- `PomBase	SPCC550.10	atd3	involved_in	GO:0019285	GO_REF:0000041	IEA	UniPathway:UPA00529	P	betaine-aldehyde dehydrogenase Atd3	meu8	protein	NCBITaxon:4896	20260227	UniProt		PomBase:SPCC550.10
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0019379) -- `PomBase	SPAC13G7.06	met16	involved_in	GO:0019379	GO_REF:0000002	IEA	InterPro:IPR004511|InterPro:IPR011800	P	phosphoadenosine phosphosulfate reductase		protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPAC13G7.06
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0019379) -- `PomBase	SPAC13G7.06	met16	involved_in	GO:0019379	GO_REF:0000033	IBA	PANTHER:PTN000591370|SGD:S000006371|UniProtKB:P17854	P	phosphoadenosine phosphosulfate reductase		protein	NCBITaxon:4896	20180816	GO_Central		PomBase:SPAC13G7.06
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0019379) -- `PomBase	SPAC7D4.07c	trx1	involved_in	GO:0019379	PMID:18758731	IMP		P	cytosolic thioredoxin Trx1		protein	NCBITaxon:4896	20150126	PomBase		PomBase:SPAC7D4.07c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0045269) -- `PomBase	SPAC222.12c	atp2	is_active_in	GO:0099617	GO_REF:0000111	IC	GO:0045269	C	F1-FO ATP synthase beta subunit (central stalk) Atp2		protein	NCBITaxon:4896	20240724	PomBase		PomBase:SPAC222.12c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0045269) -- `PomBase	SPBC13E7.04	atp16	is_active_in	GO:0099617	GO_REF:0000111	IC	GO:0045269	C	F1-FO ATP synthase delta subunit (central stalk) Atp16		protein	NCBITaxon:4896	20240724	PomBase		PomBase:SPBC13E7.04
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0045269) -- `PomBase	SPBC1734.13	atp3	is_active_in	GO:0099617	GO_REF:0000111	IC	GO:0045269	C	F1-FO ATP synthase gamma subunit		protein	NCBITaxon:4896	20240724	PomBase		PomBase:SPBC1734.13
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0045269) -- `PomBase	SPBC31F10.15c	atp15	is_active_in	GO:0099617	GO_REF:0000111	IC	GO:0045269	C	F1-FO ATP synthase epsilon subunit (central stalk) Atp15		protein	NCBITaxon:4896	20240724	PomBase		PomBase:SPBC31F10.15c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0048203) -- `PomBase	SPAP27G11.06c	vas2	involved_in	GO:0048203	PMID:19624755	NAS		P	AP-1 adaptor complex sigma subunit Aps1	aps1	protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPAP27G11.06c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0048203) -- `PomBase	SPBC947.02	apl2	involved_in	GO:0048203	PMID:19624755	NAS		P	AP-1 adaptor complex beta subunit Apl2		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBC947.02
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0048203) -- `PomBase	SPBC947.02	apl2	located_in	GO:0005829	GO_REF:0000108	IEA	GO:0048203	C	AP-1 adaptor complex beta subunit Apl2		protein	NCBITaxon:4896	20260428	GOC		PomBase:SPBC947.02
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0048203) -- `PomBase	SPBP16F5.07	apm1	involved_in	GO:0048203	PMID:19624755	NAS		P	AP-1 adaptor complex mu subunit Apm1		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPBP16F5.07
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0048203) -- `PomBase	SPCP1E11.06	apl4	involved_in	GO:0048203	PMID:19624755	NAS		P	AP-1 adaptor complex gamma subunit Apl4		protein	NCBITaxon:4896	20250828	ComplexPortal		PomBase:SPCP1E11.06
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0048203) -- `PomBase	SPCP1E11.06	apl4	located_in	GO:0005829	GO_REF:0000108	IEA	GO:0048203	C	AP-1 adaptor complex gamma subunit Apl4		protein	NCBITaxon:4896	20260428	GOC		PomBase:SPCP1E11.06
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0048203) -- `ComplexPortal	CPX-26625	ap1_schpo-1	involved_in	GO:0048203	PMID:19624755	NAS		P	Adaptor complex AP-1	Adapter complex AP-1|apl2:apl4:apm1:vas2	protein_complex	taxon:284812	20250828	ComplexPortal		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0048203) -- `ComplexPortal	CPX-26625	ap1_schpo-1	located_in	GO:0005829	GO_REF:0000108	IEA	GO:0048203	C	Adaptor complex AP-1	Adapter complex AP-1|apl2:apl4:apm1:vas2	protein_complex	taxon:284812	20260428	GOC		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051722) -- `PomBase	SPBP4H10.17c	SPBP4H10.17c	involved_in	GO:0030091	GO_REF:0000111	IC	GO:0051722	P	protein repair carboxyl methyl esterase, Pme1		protein	NCBITaxon:4896	20180213	PomBase		PomBase:SPBP4H10.17c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051722) -- `PomBase	SPBP4H10.17c	SPBP4H10.17c	involved_in	GO:1990748	GO_REF:0000111	IC	GO:0051722	P	protein repair carboxyl methyl esterase, Pme1		protein	NCBITaxon:4896	20180213	PomBase		PomBase:SPBP4H10.17c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061610) -- `PomBase	SPAC13F5.03c	gld1	involved_in	GO:0061610	PMID:20396879	IMP		P	mitochondrial glycerol dehydrogenase Gld1		protein	NCBITaxon:4896	20120227	PomBase	part_of(GO:0042149)	PomBase:SPAC13F5.03c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061610) -- `PomBase	SPAC22A12.11	dak1	involved_in	GO:0061610	PMID:10091325	IDA		P	dihydroxyacetone kinase Dak1		protein	NCBITaxon:4896	20130211	PomBase		PomBase:SPAC22A12.11
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061610) -- `PomBase	SPAC977.16c	dak2	involved_in	GO:0061610	GO_REF:0000111	IC	GO:0004371,GO:0019563	P	dihydroxyacetone kinase Dak2		protein	NCBITaxon:4896	20260422	PomBase		PomBase:SPAC977.16c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070221) -- `PomBase	SPBC2G5.06c	hmt2	involved_in	GO:0070221	GO_REF:0000033	IBA	PANTHER:PTN000066985|UniProtKB:Q9Y6N5	P	sulfide-quinone oxidoreductase	cad1	protein	NCBITaxon:4896	20180308	GO_Central		PomBase:SPBC2G5.06c
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0090611) -- `PomBase	SPAC2G11.06	vps4	involved_in	GO:0090611	GO_REF:0000033	IBA	PANTHER:PTN000553912|UniProtKB:O75351|UniProtKB:Q9UN37	P	AAA family ATPase Vps4		protein	NCBITaxon:4896	20250403	GO_Central		PomBase:SPAC2G11.06
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0140479) -- `PomBase	SPBC1604.01	egt1	involved_in	GO:0140479	GO_REF:0000108	IEA	GO:0061686	P	L-histidine N(alpha)-methyltransferase/hercynylcysteine sulfoxide synthase Egt1	SPBC1677.01c|mug158	protein	NCBITaxon:4896	20260428	GOC		PomBase:SPBC1604.01
`
### gorule-0000022

Check for, and filter, annotations made to retracted publications

* total: 0
### gorule-0000027

Each identifier in GAF is valid

* total: 6
#### Messages
* WARNING - Unknown identifier: Class ID GO:0004265 is not present in the ontology (GO:0004265) -- `PomBase	SPAC1F12.09	gpi17	is_active_in	GO:0098553	GO_REF:0000111	IC	GO:0004265	C	GPI-anchor transamidase complex subunit Pig-S, Gpi17		protein	NCBITaxon:4896	20260312	PomBase		PomBase:SPAC1F12.09
`
* WARNING - Invalid identifier: GORULE:0000027: ChEBI not found in list of database names in dbxrefs (ChEBI:3312) -- `PomBase	SPAC3G6.02	dss1	enables	GO:0005509	PMID:34439840	EXP		F	proteasome receptor/ubiquitin ligase adaptor Dss1	rpn15|sem1	protein	NCBITaxon:4896	20220214	DisProt	has_input(ChEBI:3312)	PomBase:SPAC3G6.02
`
* WARNING - Invalid identifier: GORULE:0000027: ChEBI not found in list of database names in dbxrefs (ChEBI:16337) -- `PomBase	SPBC19C7.10	bqt4	enables	GO:0008289	PMID:38825008	IDA		F	integral nuclear inner membrane protein Bqt4		protein	NCBITaxon:4896	20250617	DisProt	has_input(ChEBI:16337)	PomBase:SPBC19C7.10
`
* WARNING - Invalid identifier: GORULE:0000027: ChEBI not found in list of database names in dbxrefs (ChEBI:16337) -- `PomBase	SPBC19C7.10	bqt4	enables	GO:0008289	PMID:38825008	IPI	ChEBI:16337,ChEBI:28494	F	integral nuclear inner membrane protein Bqt4		protein	NCBITaxon:4896	20250617	DisProt		PomBase:SPBC19C7.10
`
* WARNING - Invalid identifier: GORULE:0000027: ChEBI not found in list of database names in dbxrefs (ChEBI:28494) -- `PomBase	SPBC19C7.10	bqt4	enables	GO:0008289	PMID:38825008	IPI	ChEBI:16337,ChEBI:28494	F	integral nuclear inner membrane protein Bqt4		protein	NCBITaxon:4896	20250617	DisProt		PomBase:SPBC19C7.10
`
* WARNING - Invalid identifier: GORULE:0000027: ChEBI not found in list of database names in dbxrefs (ChEBI:18420) -- `PomBase	SPCC584.04	sup35	enables	GO:0000287	PMID:15099522	IC		F	cytoplasmic translation release factor class II, GTPase eRF3	erf3|sup9	protein	NCBITaxon:4896	20231211	DisProt	has_input(ChEBI:18420)	PomBase:SPCC584.04
`
### gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

* total: 0
### gorule-0000029

IEAs should be less than one year old.

* total: 0
### gorule-0000030

Only valid GO_REFs are allowed

* total: 0
### gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

* total: 0
### gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

* total: 0
### gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

* total: 0
### gorule-0000043

Check for valid combination of evidence code, with/from rules and GO_REF

* total: 0
### gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

* total: 10
#### Messages
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPAC16A10.07c	taz1	enables	GO:0042803	GO_REF:0000002	IEA	InterPro:IPR013867	F	shelterin complex double-stranded DNA binding subunit Taz1	lot3|myb|myb1	protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPAC16A10.07c
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPAC222.11	hem13	enables	GO:0042803	GO_REF:0000024	ISS	UniProtKB:P36551	F	coproporphyrinogen III oxidase Hem13		protein	NCBITaxon:4896	20091105	UniProt		PomBase:SPAC222.11
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPAC23D3.04c	gpd2	enables	GO:0042803	GO_REF:0000002	IEA	InterPro:IPR017751	F	glycerol-3-phosphate dehydrogenase Gpd2		protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPAC23D3.04c
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPAC3F10.04	gsa1	enables	GO:0042803	GO_REF:0000024	ISS	UniProtKB:Q08220	F	glutathione synthetase large and small subunit Gsa1	gsh2	protein	NCBITaxon:4896	20091111	UniProt		PomBase:SPAC3F10.04
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPAC644.14c	rad51	involved_in	GO:0051260	PMID:15899844	IPI	UniProtKB:P36601	P	RecA family recombinase Rad51/Rhp51	loh4|rhp51	protein	NCBITaxon:4896	20061012	UniProt		PomBase:SPAC644.14c
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPAC8E11.03c	dmc1	involved_in	GO:0051260	PMID:15899844	IPI	UniProtKB:O42634	P	RecA family ATPase Dmc1	dmp1	protein	NCBITaxon:4896	20061012	UniProt		PomBase:SPAC8E11.03c
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPBC19G7.13	tbf1	enables	GO:0042803	GO_REF:0000002	IEA	InterPro:IPR013867	F	DNA binding factor Trf1	trf1	protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPBC19G7.13
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPBC215.05	gpd1	enables	GO:0042803	GO_REF:0000002	IEA	InterPro:IPR017751	F	glycerol-3-phosphate dehydrogenase Gpd1		protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPBC215.05
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPBC3B9.19	mge1	enables	GO:0042803	GO_REF:0000002	IEA	InterPro:IPR000740	F	PAM complex nucleotide exchange factor for Ssc1 import motor/mitochondrial [2Fe-2S] cluster assembly factor, Mge1		protein	NCBITaxon:4896	20260428	InterPro		PomBase:SPBC3B9.19
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPCC320.14	sry1	enables	GO:0042803	PMID:19640845	IPI	UniProtKB:O59791	F	serine racemase Sry1	SPCC330.15c	protein	NCBITaxon:4896	20101221	UniProt		PomBase:SPCC320.14
`
### gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

* total: 0
### gorule-0000055

References should have only one ID per ID space

* total: 0
### gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

* total: 0
### gorule-0000061

Allowed gene product to term relations (gp2term)

* total: 20
#### Messages
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC1006.03c	red1	part_of	GO:0005634	PMID:21317872	IDA		C	MTREC (exosome adaptor) complex subunit Red1	iss3	protein	NCBITaxon:4896	20161120	CACAO		PomBase:SPAC1006.03c
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC13G6.03	gpi7	part_of	GO:0005783	PMID:10641037	IDA		C	Pig-G, CP2 mannose-ethanolamine phosphotransferase GPI anchor biosynthesis protein Gpi7		protein	NCBITaxon:4896	20140405	CACAO		PomBase:SPAC13G6.03
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC1834.07	klp3	part_of	GO:0005881	PMID:10641037	IDA		C	kinesin-like protein Klp3	krp1	protein	NCBITaxon:4896	20140405	CACAO		PomBase:SPAC1834.07
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC18G6.03	ypt3	part_of	GO:0005737	PMID:27630265	IDA		C	Rab11 family GTPase Ypt3		protein	NCBITaxon:4896	20170321	CACAO		PomBase:SPAC18G6.03
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC18G6.03	ypt3	part_of	GO:0035838	PMID:27082518	IDA		C	Rab11 family GTPase Ypt3		protein	NCBITaxon:4896	20170203	CACAO		PomBase:SPAC18G6.03
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC18G6.03	ypt3	part_of	GO:0035974	PMID:27630265	IDA		C	Rab11 family GTPase Ypt3		protein	NCBITaxon:4896	20170219	CACAO		PomBase:SPAC18G6.03
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC18G6.10	lem2	part_of	GO:0034506	PMID:27451393	IDA		C	LEM domain nuclear inner membrane protein Heh1/Lem2	heh1	protein	NCBITaxon:4896	20170326	CACAO		PomBase:SPAC18G6.10
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC22A12.15c	bip1	part_of	GO:0005783	PMID:10641037	IDA		C	ER heat shock protein BiP	bip	protein	NCBITaxon:4896	20140405	CACAO		PomBase:SPAC22A12.15c
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC22A12.15c	bip1	part_of	GO:0005783	PMID:8227200	IDA		C	ER heat shock protein BiP	bip	protein	NCBITaxon:4896	20140405	CACAO		PomBase:SPAC22A12.15c
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC23C4.10	sec2	part_of	GO:0090619	PMID:27630562	IDA		C	RabGEF Sec2		protein	NCBITaxon:4896	20170304	CACAO		PomBase:SPAC23C4.10
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC6F6.15	ypt5	part_of	GO:0031901	PMID:8374169	IDA		C	GTPase Ypt5		protein	NCBITaxon:4896	20140406	CACAO		PomBase:SPAC6F6.15
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPAC9E9.07c	ypt2	part_of	GO:0035974	PMID:27630265	IMP		C	GTPase Ypt2		protein	NCBITaxon:4896	20170218	CACAO		PomBase:SPAC9E9.07c
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPBC119.05c	lsb1	part_of	GO:0005737	PMID:26542710	IDA		C	Wiskott-Aldrich syndrome homolog binding protein Lsb1		protein	NCBITaxon:4896	20160209	CACAO		PomBase:SPBC119.05c
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPBC216.07c	tor2	part_of	GO:0005634	PMID:26912660	IDA		C	TORC1 serine/threonine protein kinase Tor2	SPBC646.01c	protein	NCBITaxon:4896	20160307	CACAO		PomBase:SPBC216.07c
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPCC1183.12	spo13	part_of	GO:0035974	PMID:27630265	IDA		C	sporulation specific RabGEF Spo13	SPNGAF60	protein	NCBITaxon:4896	20170218	CACAO		PomBase:SPCC1183.12
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPCC1183.12	spo13	part_of	GO:0035974	PMID:27630265	IMP		C	sporulation specific RabGEF Spo13	SPNGAF60	protein	NCBITaxon:4896	20170321	CACAO		PomBase:SPCC1183.12
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPCC24B10.07	gad8	part_of	GO:0005737	PMID:26912660	IDA		C	serine/threonine protein kinase (AGC family) Gad8		protein	NCBITaxon:4896	20160307	CACAO		PomBase:SPCC24B10.07
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPCC306.09c	cap1	part_of	GO:0030428	PMID:26542710	IDA		C	adenylyl cyclase-associated protein Cap1	cap	protein	NCBITaxon:4896	20160205	CACAO		PomBase:SPCC306.09c
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPCC4G3.11	nur1	part_of	GO:0034506	PMID:27451393	IDA		C	Lem2-Nur1 complex subunit Nur1	mug154	protein	NCBITaxon:4896	20170409	CACAO		PomBase:SPCC4G3.11
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- `PomBase	SPCC736.04c	gma12	part_of	GO:0000139	PMID:7522655	IDA		C	Golgi alpha-1,2-galactosyltransferase Gma12		protein	NCBITaxon:4896	20140405	CACAO		PomBase:SPCC736.04c
`
### gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

* total: 0
### gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

* total: 0
### gorule-0000065

Annotations to term that are candidates for obsoletion should be produce a warning

* total: 11
#### Messages
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPAC12B10.06c	sdh5	involved_in	GO:0018293	GO_REF:0000024	ISS	UniProtKB:Q08230	P	succinate dehydrogenase complex assembly protein Sdh5	emi5	protein	NCBITaxon:4896	20090727	UniProt		PomBase:SPAC12B10.06c
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPAC167.02	ptb1	involved_in	GO:0018344	GO_REF:0000024	ISS	UniProtKB:Q08603	P	geranylgeranyltransferase II beta subunit Ptb1		protein	NCBITaxon:4896	20131219	UniProt		PomBase:SPAC167.02
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPAC1687.15	gsk3	involved_in	GO:0006468	PMID:12773390	IGI	UniProtKB:Q9Y738	P	serine/threonine protein kinase Gsk3	skp1	protein	NCBITaxon:4896	20170309	UniProt		PomBase:SPAC1687.15
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPAC2E1P5.04c	cwg2	involved_in	GO:0018344	GO_REF:0000024	ISS	UniProtKB:P53609	P	geranylgeranyltransferase I beta subunit Cwg2	orb7	protein	NCBITaxon:4896	20131218	UniProt		PomBase:SPAC2E1P5.04c
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPAC2E1P5.04c	cwg2	involved_in	GO:0018344	GO_REF:0000024	ISS	UniProtKB:P53610	P	geranylgeranyltransferase I beta subunit Cwg2	orb7	protein	NCBITaxon:4896	20131219	UniProt		PomBase:SPAC2E1P5.04c
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPAPB1A10.04c	cwp1	involved_in	GO:0018343	GO_REF:0000024	ISS	UniProtKB:P49354	P	geranylgeranyltransferase I and farnesyltransferase alpha subunit Cwp1		protein	NCBITaxon:4896	20131218	UniProt		PomBase:SPAPB1A10.04c
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPAPB1A10.04c	cwp1	involved_in	GO:0018344	GO_REF:0000024	ISS	UniProtKB:P49354	P	geranylgeranyltransferase I and farnesyltransferase alpha subunit Cwp1		protein	NCBITaxon:4896	20131218	UniProt		PomBase:SPAPB1A10.04c
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPBC16D10.09	pcn1	involved_in	GO:1900264	PMID:10219083	IDA		P	PCNA	pcn	protein	NCBITaxon:4896	20191203	UniProt	has_input(ComplexPortal:CPX-2098)	PomBase:SPBC16D10.09
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPBC530.14c	dsk1	involved_in	GO:0018105	PMID:26167880	IGI	UniProtKB:O74555	P	SR protein-specific kinase Dsk1		protein	NCBITaxon:4896	20160217	CACAO		PomBase:SPBC530.14c
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPBC6B1.08c	ofd1	involved_in	GO:0018188	PMID:24550462	IDA		P	hypoxic oxygen sensor, prolyl-3,4-dihydroxylase Ofd1	uS12	protein	NCBITaxon:4896	20140404	UniProt		PomBase:SPBC6B1.08c
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPCC1620.05	bet4	involved_in	GO:0018344	GO_REF:0000024	ISS	UniProtKB:Q08602	P	Rab geranylgeranyltransferase alpha subunit Bet4		protein	NCBITaxon:4896	20131219	UniProt		PomBase:SPCC1620.05
`
### other

* total: 0