GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:1904823	purine nucleobase transmembrane transport	AnnotationPropagation	P	GO:0005345	purine nucleobase transmembrane transporter activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045039	protein insertion into mitochondrial inner membrane	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0016435	rRNA (guanine) methyltransferase activity	IBA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004601	peroxidase activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0120015	sterol transfer activity	IBA
GO:0015918	sterol transport	AnnotationPropagation	P	GO:0120015	sterol transfer activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015297	antiporter activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0035433	acetate transmembrane transport	AnnotationPropagation	P	GO:0015123	acetate transmembrane transporter activity	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0001216	DNA-binding transcription activator activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0015718	monocarboxylic acid transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:0015812	gamma-aminobutyric acid transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:1905039	carboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0046513	ceramide biosynthetic process	IBA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0008865	fructokinase activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0008296	3'-5'-DNA exonuclease activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0001522	pseudouridine synthesis	AnnotationPropagation	P	GO:0004730	pseudouridylate synthase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0045944	positive regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034982	mitochondrial protein processing	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0033214	siderophore-dependent iron import into cell	AnnotationPropagation	P	GO:0015343	siderophore-iron transmembrane transporter activity	IBA
GO:0044718	siderophore transmembrane transport	AnnotationPropagation	P	GO:0015343	siderophore-iron transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032979	protein insertion into mitochondrial inner membrane from matrix	IBA
GO:0015813	L-glutamate transmembrane transport	AnnotationPropagation	P	GO:0005313	L-glutamate transmembrane transporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0006355	regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0061727	methylglyoxal catabolic process to lactate	AnnotationPropagation	P	GO:0019172	glyoxalase III activity	IBA
GO:0019249	lactate biosynthetic process	AnnotationPropagation	P	GO:0019172	glyoxalase III activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071036	nuclear polyadenylation-dependent snoRNA catabolic process	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IBA
GO:0000316	sulfite transmembrane transport	AnnotationPropagation	P	GO:0000319	sulfite transmembrane transporter activity	IBA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0003678	DNA helicase activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0003678	DNA helicase activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0140658	ATP-dependent chromatin remodeler activity	IBA
GO:0070588	calcium ion transmembrane transport	AnnotationPropagation	P	GO:0005262	calcium channel activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0051864	histone H3K36 demethylase activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0042054	histone methyltransferase activity	IBA
GO:1904668	positive regulation of ubiquitin protein ligase activity	AnnotationPropagation	P	GO:1990757	ubiquitin ligase activator activity	IBA
GO:0000316	sulfite transmembrane transport	AnnotationPropagation	P	GO:0000319	sulfite transmembrane transporter activity	IBA
GO:0015816	glycine transport	AnnotationPropagation	P	GO:0015187	glycine transmembrane transporter activity	IBA
GO:1902475	L-alpha-amino acid transmembrane transport	AnnotationPropagation	P	GO:0015187	glycine transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070901	mitochondrial tRNA methylation	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0034755	iron ion transmembrane transport	AnnotationPropagation	P	GO:0015093	ferrous iron transmembrane transporter activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0017108	5'-flap endonuclease activity	IBA
GO:0006222	UMP biosynthetic process	AnnotationPropagation	P	GO:0004849	uridine kinase activity	IBA
GO:0072334	UDP-galactose transmembrane transport	AnnotationPropagation	P	GO:0005459	UDP-galactose transmembrane transporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0005783	endoplasmic reticulum	AnnotationPropagation	C	GO:0006621	protein retention in ER lumen	IBA
GO:0042823	pyridoxal phosphate biosynthetic process	AnnotationPropagation	P	GO:0004733	pyridoxamine phosphate oxidase activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0097359	UDP-glucosylation	AnnotationPropagation	P	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0016433	rRNA (adenine) methyltransferase activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015297	antiporter activity	IBA
GO:1903830	magnesium ion transmembrane transport	AnnotationPropagation	P	GO:0015095	magnesium ion transmembrane transporter activity	IBA
GO:0051170	import into nucleus	AnnotationPropagation	P	GO:0061608	nuclear import signal receptor activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	AnnotationPropagation	P	GO:0051500	D-tyrosyl-tRNA(Tyr) deacylase activity	IBA
GO:1901679	nucleotide transmembrane transport	AnnotationPropagation	P	GO:0015218	pyrimidine nucleotide transmembrane transporter activity	IBA
GO:0006864	pyrimidine nucleotide transport	AnnotationPropagation	P	GO:0015218	pyrimidine nucleotide transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0000165	MAPK cascade	AnnotationPropagation	P	GO:0004707	MAP kinase activity	IBA
GO:0051170	import into nucleus	AnnotationPropagation	P	GO:0061608	nuclear import signal receptor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0003873	6-phosphofructo-2-kinase activity	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0061025	membrane fusion	AnnotationPropagation	P	GO:0005484	SNAP receptor activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0071577	zinc ion transmembrane transport	AnnotationPropagation	P	GO:0005385	zinc ion transmembrane transporter activity	IBA
GO:0015791	polyol transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0015798	myo-inositol transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0043504	mitochondrial DNA repair	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0043504	mitochondrial DNA repair	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0001216	DNA-binding transcription activator activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0006366	transcription by RNA polymerase II	AnnotationPropagation	P	GO:0016251	RNA polymerase II general transcription initiation factor activity	IBA
GO:0036261	7-methylguanosine cap hypermethylation	AnnotationPropagation	P	GO:0071164	RNA cap trimethylguanosine synthase activity	IBA
GO:0098734	macromolecule depalmitoylation	AnnotationPropagation	P	GO:0008474	palmitoyl-(protein) hydrolase activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0051999	mannosyl-inositol phosphorylceramide biosynthetic process	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0071577	zinc ion transmembrane transport	AnnotationPropagation	P	GO:0005385	zinc ion transmembrane transporter activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0016192	vesicle-mediated transport	AnnotationPropagation	P	GO:0035615	clathrin adaptor activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0042054	histone methyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045039	protein insertion into mitochondrial inner membrane	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0042799	histone H4K20 methyltransferase activity	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0006624	vacuolar protein processing	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0099116	tRNA 5'-end processing	AnnotationPropagation	P	GO:0008193	tRNA guanylyltransferase activity	IBA
GO:0046940	nucleoside monophosphate phosphorylation	AnnotationPropagation	P	GO:0004017	adenylate kinase activity	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	IBA
GO:0035442	dipeptide transmembrane transport	AnnotationPropagation	P	GO:0071916	dipeptide transmembrane transporter activity	IBA
GO:0071897	DNA biosynthetic process	AnnotationPropagation	P	GO:0003887	DNA-directed DNA polymerase activity	IBA
GO:0098656	monoatomic anion transmembrane transport	AnnotationPropagation	P	GO:0008308	voltage-gated monoatomic anion channel activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0030148	sphingolipid biosynthetic process	IBA
GO:0000316	sulfite transmembrane transport	AnnotationPropagation	P	GO:0000319	sulfite transmembrane transporter activity	IBA
GO:0006744	ubiquinone biosynthetic process	AnnotationPropagation	P	GO:0008425	2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:0042780	tRNA 3'-end processing	AnnotationPropagation	P	GO:0042781	3'-tRNA processing endoribonuclease activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045040	protein insertion into mitochondrial outer membrane	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:1901962	S-adenosyl-L-methionine transmembrane transport	AnnotationPropagation	P	GO:0000095	S-adenosyl-L-methionine transmembrane transporter activity	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0036092	phosphatidylinositol-3-phosphate biosynthetic process	AnnotationPropagation	P	GO:0016303	1-phosphatidylinositol-3-kinase activity	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0051726	regulation of cell cycle	AnnotationPropagation	P	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0051170	import into nucleus	AnnotationPropagation	P	GO:0061608	nuclear import signal receptor activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045040	protein insertion into mitochondrial outer membrane	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0140053	mitochondrial gene expression	IBA
GO:0006657	CDP-choline pathway	AnnotationPropagation	P	GO:0004103	choline kinase activity	IBA
GO:1902358	sulfate transmembrane transport	AnnotationPropagation	P	GO:0015116	sulfate transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070124	mitochondrial translational initiation	IBA
GO:0019430	removal of superoxide radicals	AnnotationPropagation	P	GO:0004784	superoxide dismutase activity	IBA
GO:0001188	RNA polymerase I preinitiation complex assembly	AnnotationPropagation	P	GO:0001164	RNA polymerase I core promoter sequence-specific DNA binding	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0030148	sphingolipid biosynthetic process	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0009378	four-way junction helicase activity	IBA
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0032452	histone demethylase activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0010485	histone H4 acetyltransferase activity	IBA
GO:0045944	positive regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0140053	mitochondrial gene expression	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0070588	calcium ion transmembrane transport	AnnotationPropagation	P	GO:0005262	calcium channel activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032979	protein insertion into mitochondrial inner membrane from matrix	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0140658	ATP-dependent chromatin remodeler activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0051999	mannosyl-inositol phosphorylceramide biosynthetic process	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0051999	mannosyl-inositol phosphorylceramide biosynthetic process	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0035352	NAD transmembrane transport	AnnotationPropagation	P	GO:0051724	NAD transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0017108	5'-flap endonuclease activity	IBA
GO:1990822	basic amino acid transmembrane transport	AnnotationPropagation	P	GO:0015174	basic amino acid transmembrane transporter activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0043139	5'-3' DNA helicase activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015297	antiporter activity	IBA
GO:0019344	cysteine biosynthetic process	AnnotationPropagation	P	GO:0004124	cysteine synthase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070158	mitochondrial seryl-tRNA aminoacylation	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IBA
GO:0006633	fatty acid biosynthetic process	AnnotationPropagation	P	GO:0000036	acyl carrier activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0061727	methylglyoxal catabolic process to lactate	AnnotationPropagation	P	GO:0019172	glyoxalase III activity	IBA
GO:0019249	lactate biosynthetic process	AnnotationPropagation	P	GO:0019172	glyoxalase III activity	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0140658	ATP-dependent chromatin remodeler activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0046521	sphingoid catabolic process	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032979	protein insertion into mitochondrial inner membrane from matrix	IBA
GO:0015791	polyol transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0015798	myo-inositol transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006666	3-keto-sphinganine metabolic process	IBA
GO:0000165	MAPK cascade	AnnotationPropagation	P	GO:0004708	MAP kinase kinase activity	IBA
GO:0071421	manganese ion transmembrane transport	AnnotationPropagation	P	GO:0005384	manganese ion transmembrane transporter activity	IBA
GO:1903830	magnesium ion transmembrane transport	AnnotationPropagation	P	GO:0015095	magnesium ion transmembrane transporter activity	IBA
GO:1901800	positive regulation of proteasomal protein catabolic process	AnnotationPropagation	P	GO:0036402	proteasome-activating activity	IBA
GO:0015718	monocarboxylic acid transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:0015812	gamma-aminobutyric acid transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:1905039	carboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:0015847	putrescine transport	AnnotationPropagation	P	GO:0015489	putrescine transmembrane transporter activity	IBA
GO:1902047	polyamine transmembrane transport	AnnotationPropagation	P	GO:0015489	putrescine transmembrane transporter activity	IBA
GO:0006355	regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0000964	mitochondrial RNA 5'-end processing	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032979	protein insertion into mitochondrial inner membrane from matrix	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0042407	cristae formation	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0016192	vesicle-mediated transport	AnnotationPropagation	P	GO:0035615	clathrin adaptor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071038	TRAMP-dependent tRNA surveillance pathway	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0017108	5'-flap endonuclease activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:1901800	positive regulation of proteasomal protein catabolic process	AnnotationPropagation	P	GO:0036402	proteasome-activating activity	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity	IBA
GO:0070588	calcium ion transmembrane transport	AnnotationPropagation	P	GO:0015369	calcium:proton antiporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0015369	calcium:proton antiporter activity	IBA
GO:0061025	membrane fusion	AnnotationPropagation	P	GO:0005484	SNAP receptor activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0043998	histone H2A acetyltransferase activity	IBA
GO:0016020	membrane	AnnotationPropagation	C	GO:0006506	GPI anchor biosynthetic process	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034553	mitochondrial respiratory chain complex II assembly	IBA
GO:0061025	membrane fusion	AnnotationPropagation	P	GO:0005484	SNAP receptor activity	IBA
GO:0015847	putrescine transport	AnnotationPropagation	P	GO:0015489	putrescine transmembrane transporter activity	IBA
GO:1902047	polyamine transmembrane transport	AnnotationPropagation	P	GO:0015489	putrescine transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:1901962	S-adenosyl-L-methionine transmembrane transport	AnnotationPropagation	P	GO:0000095	S-adenosyl-L-methionine transmembrane transporter activity	IBA
GO:0072488	ammonium transmembrane transport	AnnotationPropagation	P	GO:0008519	ammonium channel activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0097250	mitochondrial respirasome assembly	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0140053	mitochondrial gene expression	IBA
GO:0071421	manganese ion transmembrane transport	AnnotationPropagation	P	GO:0005384	manganese ion transmembrane transporter activity	IBA
GO:0035461	vitamin transmembrane transport	AnnotationPropagation	P	GO:0008517	folic acid transmembrane transporter activity	IBA
GO:0015884	folic acid transport	AnnotationPropagation	P	GO:0008517	folic acid transmembrane transporter activity	IBA
GO:1905039	carboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0008517	folic acid transmembrane transporter activity	IBA