Overview

The gene association files ingested from GO Consortium members are shown in the table below. Files are in the GO annotation file format and are compressed using the UNIX gzip utility. Please see the upstream resource information for further details on the annotation set. Any errors or omissions in annotations should be reported by writing to the GO Helpdesk.


Filtered Files

These files are taxon-specific and reflect the work of specific projects, primarily the model organisms database groups, to provide comprehensive, non-redundant annotation files for their organism. All the files in this table have been filtered using the annotation file QC pipeline. A major component to the filtering is the requirement that particular taxon IDs can only be included within the association files provided by specific projects; the current list of authoritative groups and major model organisms can be found below.


Filtered Annotation File Downloads for 2020-03-05 release

Species/Database Entity type Annotations File
Species/Database Entity type Annotations File
Sus scrofa
EBI Gene Ontology Annotation Database (goa)
isoform 74765 goa_pig_isoform.gaf (gzip)
Mus musculus
Mouse Genome Informatics (mgi)
n/a 361365 mgi.gaf (gzip)
Aspergillus nidulans
Aspergillus Genome Database (aspgd)
n/a 660786 aspgd.gaf (gzip)
Sus scrofa
EBI Gene Ontology Annotation Database (goa)
protein 114233 goa_pig.gaf (gzip)
Gallus gallus
EBI Gene Ontology Annotation Database (goa)
complex 25 goa_chicken_complex.gaf (gzip)
Schizosaccharomyces pombe
PomBase (pombase)
n/a 41776 pombase.gaf (gzip)
Sus scrofa
EBI Gene Ontology Annotation Database (goa)
complex 14 goa_pig_complex.gaf (gzip)
Caenorhabditis elegans
WormBase database of nematode biology (wb)
n/a 94651 wb.gaf (gzip)
Sus scrofa
EBI Gene Ontology Annotation Database (goa)
rna 9 goa_pig_rna.gaf (gzip)
Homo sapiens
EBI Gene Ontology Annotation Database (goa)
isoform 103606 goa_human_isoform.gaf (gzip)
Gallus gallus
EBI Gene Ontology Annotation Database (goa)
protein 112169 goa_chicken.gaf (gzip)

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The Gene Ontology Consortium is supported by a P41 grant from the National Human Genome Research Institute (NHGRI) [grant 5U41HG002273-14]. The Gene Ontology Consortium would like to acknowledge the assistance of many more people than can be listed here. Please visit the annotation contributors page for the full list.