GORULE violations assigned by AgBase

Contents

gorule-0000008 No annotations should be made to uninformative high level terms

gorule-0000013 Taxon-appropriate annotation check

gorule-0000020 Automatic repair of annotations to merged or obsoleted terms

gorule-0000046 The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

gorule-0000061 Allowed gene product to term relations (gp2term)

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

• total: 97

messages

• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB D0G0B6 PLIN2 located_in GO:0005622 PMID:21420243 IDA C Perilipin PLIN2|ADFP protein taxon:9823 20150513 AgBase part_of(CL:0000187),part_of(UBERON:0001381) UniProtKB:D0G0B6 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1RIT1 TRPV4 involved_in GO:0061098 PMID:22492652 IMP P Ion transport domain-containing protein TRPV4 protein taxon:9823 20150728 AgBase occurs_in(UBERON:0001803),happens_during(GO:0071476) UniProtKB:F1RIT1 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1RIT1 TRPV4 involved_in GO:1903408 PMID:22492652 IMP P Ion transport domain-containing protein TRPV4 protein taxon:9823 20150728 AgBase occurs_in(UBERON:0001803),happens_during(GO:0071476) UniProtKB:F1RIT1 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1RIT1 TRPV4 located_in GO:0005622 PMID:19790068 IDA C Ion transport domain-containing protein TRPV4 protein taxon:9823 20150803 AgBase part_of(CL:0000138) UniProtKB:F1RIT1 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1RLP5 ARHGEF2 involved_in GO:1904685 PMID:23389627 IMP P Rho guanine nucleotide exchange factor 2 ARHGEF2 protein taxon:9823 20160116 AgBase has_input(UniProtKB:O77636) UniProtKB:F1RLP5 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`MGI MGI:1341830 Eif2ak3 involved_in GO:0046777 MGI:MGI:5514336|PMID:12610133 IDA P eukaryotic translation initiation factor 2 alpha kinase 3 PERK protein_coding_gene taxon:10090 20141207 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`MGI MGI:96157 Hmgb2 enables GO:0008134 MGI:MGI:5490149|PMID:23495099 IDA F high mobility group box 2 Hmg2|HMG-2 protein_coding_gene taxon:10090 20150512 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`MGI MGI:1197010 Sumo1 enables GO:0008134 MGI:MGI:5616325|PMID:15023536 IMP F small ubiquitin-like modifier 1 PIC1|SENTRIN|Smt3C|Ubl1 protein_coding_gene taxon:10090 20150116 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB A4L7N3 FOXO1 involved_in GO:0018105 PMID:24280217 IDA P Forkhead box protein O1 FOXO1|FOXO1A protein taxon:9823 20141226 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB A4L7N3 FOXO1 involved_in GO:0018107 PMID:24280217 IDA P Forkhead box protein O1 FOXO1|FOXO1A protein taxon:9823 20141226 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB A7WLH8 SUMO1 enables GO:0008134 GO_REF:0000024 ISS UniProtKB:P63166 F Small ubiquitin-related modifier 1 SUMO1 protein taxon:9823 20150116 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB B2DCZ9 ARHGEF2 involved_in GO:1904685 PMID:23389627 IMP P Rho guanine nucleotide exchange factor 2 ARHGEF2 protein taxon:9823 20160116 AgBase has_input(UniProtKB:O77636) `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB E5Q8C6 CEBPB involved_in GO:0051091 PMID:25110868 IMP P CCAAT/enhancer-binding protein CEBPB protein taxon:9823 20141106 AgBase has_input(UniProtKB:P56432) `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1RJ01 HMGB2 enables GO:0008134 GO_REF:0000024 ISS UniProtKB:P30681 F High mobility group protein B2 HMGB2 protein taxon:9823 20150512 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1RJ01 HMGB2 enables GO:0008134 GO_REF:0000024 ISS UniProtKB:Q3U566 F High mobility group protein B2 HMGB2 protein taxon:9823 20150512 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1RJ01 HMGB2 involved_in GO:0043388 GO_REF:0000024 ISS UniProtKB:P30681 P High mobility group protein B2 HMGB2 protein taxon:9823 20150508 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1RME6 FOXO1 involved_in GO:0018105 PMID:24280217 IDA P Forkhead box protein O1 FOXO1 protein taxon:9823 20141226 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1RME6 FOXO1 involved_in GO:0018107 PMID:24280217 IDA P Forkhead box protein O1 FOXO1 protein taxon:9823 20141226 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1S6Q9 STK11 involved_in GO:0006468 PMID:20203304 IMP P Acetyl-CoA carboxylase kinase STK11 protein taxon:9823 20151030 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB I3L8Q3 CSF2 involved_in GO:0072651 PMID:16792532 IMP P Granulocyte-macrophage colony-stimulating factor CSF2 protein taxon:9823 20150530 AgBase occurs_in(CL:1000274) `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB I3LVS7 RHOA involved_in GO:0043280 GO_REF:0000024 ISS UniProtKB:P61589 P Transforming protein RhoA RHOA protein taxon:9823 20150916 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB I3LVS7 RHOA involved_in GO:0060193 GO_REF:0000024 ISS UniProtKB:P61586 P Transforming protein RhoA RHOA protein taxon:9823 20150916 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P05207 PRKAR2A involved_in GO:2000480 PMID:22674394 IMP P cAMP-dependent protein kinase type II-alpha regulatory subunit PRKAR2A protein taxon:9823 20150411 AgBase occurs_in(CL:0000654) `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P56432 JUN involved_in GO:0051091 PMID:25110868 IMP P Transcription factor Jun JUN protein taxon:9823 20141106 AgBase has_input(UniProtKB:E5Q8C6) `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q29031 MYC involved_in GO:0006919 GO_REF:0000024 ISS UniProtKB:P01108 P Myc proto-oncogene protein MYC protein taxon:9823 20070814 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q4PLW0 PLIN2 located_in GO:0005622 PMID:21420243 IDA C Perilipin-2 PLIN2|ADFP|ADRP protein taxon:9823 20150513 AgBase part_of(CL:0000187),part_of(UBERON:0001381) `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q6GUA6 GDF9 involved_in GO:0043406 PMID:24313324 IMP P Growth/differentiation factor 9 GDF9 protein taxon:9823 20141117 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q6GUA6 GDF9 involved_in GO:0045737 PMID:24313324 IMP P Growth/differentiation factor 9 GDF9 protein taxon:9823 20141117 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1N9Y5 SYK involved_in GO:0018108 PMID:11434777 IMP P Tyrosine-protein kinase SYK SYK|RCJMB04_19o18 protein taxon:9031 20110407 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1NHL2 CAND1 involved_in GO:0043086 GO_REF:0000024 ISS UniProtKB:Q86VP6 P Cullin-associated NEDD8-dissociated protein 1 CAND1 protein taxon:9031 20080204 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1NPU8 HMGB2 enables GO:0008134 GO_REF:0000024 ISS UniProtKB:P30681 F High mobility group protein B2 HMGB2 protein taxon:9031 20150512 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1NPU8 HMGB2 enables GO:0008134 GO_REF:0000024 ISS UniProtKB:Q3U566 F High mobility group protein B2 HMGB2 protein taxon:9031 20150512 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1P4G3 HIPK2 involved_in GO:0006468 GO_REF:0000024 ISS UniProtKB:Q9QZR5 P Homeodomain interacting protein kinase 2 HIPK2 protein taxon:9031 20061117 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB F1P4G3 HIPK2 involved_in GO:0043388 GO_REF:0000024 ISS UniProtKB:Q9QZR5 P Homeodomain interacting protein kinase 2 HIPK2 protein taxon:9031 20061117 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB O42410 IKZF1 involved_in GO:0002377 PMID:20602434 TAS P DNA-binding protein Ikaros IKZF1|IK|IKAROS|ZNFN1A1 protein taxon:9031 20120130 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB O42410 IKZF1 involved_in GO:0016049 PMID:20602434 TAS P DNA-binding protein Ikaros IKZF1|IK|IKAROS|ZNFN1A1 protein taxon:9031 20120130 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P07341 ALDOB involved_in GO:0032781 PMID:2985560 ISA UniProtKB:P05062 P Fructose-bisphosphate aldolase B ALDOB protein taxon:9031 20090306 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P11029 ACAC involved_in GO:0006810 PMID:20816383 TAS P Acetyl-CoA carboxylase ACAC protein taxon:9031 20130306 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P12957 CALD1 involved_in GO:1903611 PMID:8925441 IMP P Caldesmon CALD1|CAD protein taxon:9031 20150421 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P30371 TGFB2 involved_in GO:0006468 PMID:10401723 ISA UniProtKB:P61812 P Transforming growth factor beta-2 proprotein TGFB2 protein taxon:9031 20091203 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P30371 TGFB2 involved_in GO:0008219 PMID:10401723 ISA UniProtKB:P61812 P Transforming growth factor beta-2 proprotein TGFB2 protein taxon:9031 20091203 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P30371 TGFB2 involved_in GO:0010693 PMID:10401723 ISA UniProtKB:P61812 P Transforming growth factor beta-2 proprotein TGFB2 protein taxon:9031 20091203 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P30371 TGFB2 involved_in GO:0032147 PMID:10401723 ISA UniProtKB:P61812 P Transforming growth factor beta-2 proprotein TGFB2 protein taxon:9031 20090424 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P49416 SDC4 involved_in GO:0061098 GO_REF:0000024 ISS UniProtKB:G3UNU3 P Syndecan-4 SDC4 protein taxon:9031 20150616 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P49416 SDC4 involved_in GO:0061098 GO_REF:0000024 ISS UniProtKB:Q5I5K4 P Syndecan-4 SDC4 protein taxon:9031 20150616 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P49416 SDC4 involved_in GO:0090630 GO_REF:0000024 ISS UniProtKB:G3UNU3 P Syndecan-4 SDC4 protein taxon:9031 20141211 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P49416 SDC4 involved_in GO:0090630 GO_REF:0000024 ISS UniProtKB:Q5I5K4 P Syndecan-4 SDC4 protein taxon:9031 20141211 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P63283 UBE2I enables GO:0008134 PMID:23382206 IPI UniProtKB:P48434 F SUMO-conjugating enzyme UBC9 UBE2I|UBC9|UBCE9 protein taxon:9031 20140514 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q00649 HSPB1 involved_in GO:0006469 PMID:15135047 ISS UniProtKB:P14602 P Heat shock protein beta-1 HSPB1 protein taxon:9031 20140201 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q00649 HSPB1 involved_in GO:0071901 PMID:15135047 ISS UniProtKB:P14602 P Heat shock protein beta-1 HSPB1 protein taxon:9031 20140201 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q00649 HSPB1 located_in GO:0005622 PMID:15135047 ISS UniProtKB:P14602 C Heat shock protein beta-1 HSPB1 protein taxon:9031 20140201 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q00944 PTK2 involved_in GO:0032092 PMID:15340073 IMP P Focal adhesion kinase 1 PTK2|FAK|FAK1 protein taxon:9031 20160113 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q00944 PTK2 involved_in GO:0046777 PMID:10409118 IDA P Focal adhesion kinase 1 PTK2|FAK|FAK1 protein taxon:9031 20160114 AgBase occurs_in(UBERON:0001112),occurs_in(CL:0000187)|occurs_in(CL:0002372),occurs_in(CL:0000515) `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q00944 PTK2 involved_in GO:0061098 PMID:15340073 IMP P Focal adhesion kinase 1 PTK2|FAK|FAK1 protein taxon:9031 20160113 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q05423 FABP7 enables GO:0008134 PMID:10090146 TAS F Fatty acid-binding protein, brain FABP7 protein taxon:9031 20100429 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q05876 FYN involved_in GO:0018108 GO_REF:0000024 ISS UniProtKB:Q62844 P Tyrosine-protein kinase Fyn FYN protein taxon:9031 20061003 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q06900 ChALK5 NOT|involved_in GO:0010692 PMID:15766759 IMP P TGF-beta receptor type-1 ChALK5|TGFBR1 protein taxon:9031 20090210 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q06900 ChALK5 involved_in GO:0006468 PMID:10885742 ISA UniProtKB:P36897 P TGF-beta receptor type-1 ChALK5|TGFBR1 protein taxon:9031 20091203 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q06900 ChALK5 involved_in GO:0018105 PMID:10885742 ISA UniProtKB:P36897 P TGF-beta receptor type-1 ChALK5|TGFBR1 protein taxon:9031 20130311 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q06900 ChALK5 involved_in GO:0018107 PMID:10885742 ISA UniProtKB:P36897 P TGF-beta receptor type-1 ChALK5|TGFBR1 protein taxon:9031 20130311 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q06900 ChALK5 involved_in GO:0043393 PMID:10885742 ISA UniProtKB:Q64729 P TGF-beta receptor type-1 ChALK5|TGFBR1 protein taxon:9031 20130311 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q4JIM4 PSEN1 involved_in GO:0043085 GO_REF:0000024 ISS UniProtKB:P49768 P Presenilin-1 PSEN1 protein taxon:9031 20061003 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q679P3 PDLIM7 enables GO:0008134 PMID:15302601 IPI UniProtKB:O93288 F PDZ and LIM domain protein 7 PDLIM7|LMP|RCJMB04_14g20 protein taxon:9031 20150408 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q679P3 PDLIM7 enables GO:0008134 PMID:15302601 IPI UniProtKB:Q9PWE8 F PDZ and LIM domain protein 7 PDLIM7|LMP|RCJMB04_14g20 protein taxon:9031 20150408 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q679P3 PDLIM7 involved_in GO:0043433 PMID:16880269 IDA P PDZ and LIM domain protein 7 PDLIM7|LMP|RCJMB04_14g20 protein taxon:9031 20151214 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q679P3 PDLIM7 involved_in GO:0043433 PMID:18160705 IDA P PDZ and LIM domain protein 7 PDLIM7|LMP|RCJMB04_14g20 protein taxon:9031 20151215 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q703P0 CRH NOT|involved_in GO:0051341 PMID:18620026 IDA P Corticotropin-releasing factor domain-containing protein CRH protein taxon:9031 20130312 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q703P0 CRH NOT|involved_in GO:0051341 PMID:18786646 IDA P Corticotropin-releasing factor domain-containing protein CRH protein taxon:9031 20130312 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q703P0 CRH NOT|involved_in GO:2000983 PMID:18620026 IDA P Corticotropin-releasing factor domain-containing protein CRH protein taxon:9031 20130312 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q703P0 CRH NOT|involved_in GO:2000983 PMID:18786646 IDA P Corticotropin-releasing factor domain-containing protein CRH protein taxon:9031 20130312 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q703P0 CRH involved_in GO:0051353 PMID:18620026 IDA P Corticotropin-releasing factor domain-containing protein CRH protein taxon:9031 20130312 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q703P0 CRH involved_in GO:2000985 PMID:18620026 IDA P Corticotropin-releasing factor domain-containing protein CRH protein taxon:9031 20130312 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q8QGH2 SUMO1 enables GO:0008134 GO_REF:0000024 ISS UniProtKB:P63166 F Small ubiquitin-related modifier 1 SUMO1|RCJMB04_2j18 protein taxon:9031 20150116 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q8QGW7 LITAF involved_in GO:0001816 PMID:18539728 TAS P Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog LITAF|SIMPLE protein taxon:9031 20090716 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q90694 CDC42 involved_in GO:0045860 GO_REF:0000024 ISS UniProtKB:P40793 P Cell division control protein 42 homolog CDC42 protein taxon:9031 20060411 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q90738 AFAP1 involved_in GO:0018108 PMID:15485829 IGI UniProtKB:P00523 P Actin filament-associated protein 1 AFAP1 protein taxon:9031 20100802 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q90738 AFAP1 involved_in GO:0018109 PMID:15485829 IMP P Actin filament-associated protein 1 AFAP1 protein taxon:9031 20100802 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q90998 TGFBR3 involved_in GO:0016049 PMID:8167376 ISA UniProtKB:P26342 P ZP domain-containing protein TGFBR3 protein taxon:9031 20091203 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q90998 TGFBR3 involved_in GO:0043393 PMID:8167376 ISA UniProtKB:P26342 P ZP domain-containing protein TGFBR3 protein taxon:9031 20091203 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q90999 TGFBR2 involved_in GO:0006468 PMID:8167376 ISA UniProtKB:P37173 P TGF-beta receptor type-2 TGFBR2 protein taxon:9031 20130311 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q90ZK6 ACVR1 involved_in GO:0006468 PMID:10885742 ISA UniProtKB:Q04771 P Activin receptor type-1 ACVR1 protein taxon:9031 20090113 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q90ZK6 ACVR1 involved_in GO:0010694 PMID:15766759 IMP P Activin receptor type-1 ACVR1 protein taxon:9031 20090211 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q90ZK6 ACVR1 involved_in GO:0018107 PMID:10885742 ISA UniProtKB:Q04771 P Activin receptor type-1 ACVR1 protein taxon:9031 20130311 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q91035 SHH involved_in GO:0090269 PMID:10524628 IMP P Sonic hedgehog protein SHH protein taxon:9031 20141202 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q91035 SHH involved_in GO:0090269 PMID:9187149 IDA P Sonic hedgehog protein SHH protein taxon:9031 20150522 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q98938 IHH involved_in GO:0007228 PMID:23928032 IMP P Indian hedgehog protein IHH protein taxon:9031 20150522 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q98938 IHH involved_in GO:0010694 PMID:19252479 IMP P Indian hedgehog protein IHH protein taxon:9031 20150522 AgBase occurs_in(UBERON:0010328) `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q98938 IHH involved_in GO:0010694 PMID:9268735 IDA P Indian hedgehog protein IHH protein taxon:9031 20150522 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9I9E0 TAOK3 involved_in GO:0006468 GO_REF:0000024 ISS UniProtKB:Q9H2K8 P Serine/threonine-protein kinase TAO3 TAOK3|KFC|RCJMB04_21d18 protein taxon:9031 20100402 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9I9E0 TAOK3 involved_in GO:0046777 GO_REF:0000024 ISS UniProtKB:Q9H2K8 P Serine/threonine-protein kinase TAO3 TAOK3|KFC|RCJMB04_21d18 protein taxon:9031 20100402 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9IA05 FZD4 involved_in GO:0043507 PMID:11044615 ISO UniProtKB:Q61088 P Frizzled-4 FZD4|FZ4 protein taxon:9031 20120809 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9IA05 FZD4 involved_in GO:0051091 PMID:11044615 ISO UniProtKB:Q61088 P Frizzled-4 FZD4|FZ4 protein taxon:9031 20120809 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9IA05 FZD4 involved_in GO:0051091 PMID:11044615 ISO UniProtKB:Q9ULV1 P Frizzled-4 FZD4|FZ4 protein taxon:9031 20120809 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9W734 SMAD6 involved_in GO:0010693 PMID:12919880 IMP P Mothers against decapentaplegic homolog 6 SMAD6|MADH6 protein taxon:9031 20150201 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9YGC1 BLNK involved_in GO:0007202 PMID:10023776 IMP P B-cell linker protein BLNK|BASH protein taxon:9031 20090722 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9YGL6 PALM involved_in GO:0007194 PMID:9813098 ISS UniProtKB:Q9Z0P4 P Paralemmin-1 PALM protein taxon:9031 20140201 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9YGL6 PALM located_in GO:0005622 PMID:9813098 IDA C Paralemmin-1 PALM protein taxon:9031 20170202 AgBase part_of(UBERON:0000955) `

gorule-0000013

Taxon-appropriate annotation check

• total: 1

messages

• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB P08998 GH involved_in GO:0035846 PMID:24744268 IDA P Somatotropin GH protein taxon:9031 20150219 AgBase `

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 1

messages

• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q5ZMF9 DERL1 involved_in GO:0030433 GO_REF:0000024 ISS UniProtKB:Q9BUN8 P Derlin DERL1|RCJMB04_2c17 protein taxon:9031 20060526 AgBase `

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

• total: 28

messages

• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q16656 NRF1 enables GO:0042803 GO_REF:0000024 ISS UniProtKB:Q90979 F Nuclear respiratory factor 1 NRF1 protein taxon:9606 20150422 AgBase UniProtKB:Q16656-4 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB E1BSJ7 SKI enables GO:0042803 PMID:9927733 IMP F Ski oncogene SKI protein taxon:9031 20150414 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB F1NNP2 TGFB2 enables GO:0042803 GO_REF:0000024 ISS UniProtKB:P61812 F Transforming growth factor beta TGFB2 protein taxon:9031 20141202 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB F1P0N0 SKIL enables GO:0042803 PMID:9927733 IMP F c-SKI SMAD4-binding domain-containing protein SKIL protein taxon:9031 20150414 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB F1P3Y2 RHO enables GO:0042803 PMID:2605226 IDA F Rhodopsin RHO protein taxon:9031 20150604 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P02504 CRYAA involved_in GO:0051260 PMID:15135047 ISS UniProtKB:P02489 P Alpha-crystallin A chain CRYAA protein taxon:9031 20140201 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05094 ACTN1 enables GO:0042803 PMID:8037676 IDA F Alpha-actinin-1 ACTN1 protein taxon:9031 20150407 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P12003 VCL enables GO:0042803 PMID:8037676 IDA F Vinculin VCL|VINC1 protein taxon:9031 20150407 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P14105 MYH9 enables GO:0043621 PMID:1512291 IMP F Myosin-9 MYH9 protein taxon:9031 20061030 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P22328 RHO enables GO:0042803 PMID:2605226 IDA F Rhodopsin RHO protein taxon:9031 20150604 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P22328 RHO involved_in GO:0070207 PMID:2605226 IDA P Rhodopsin RHO protein taxon:9031 20150604 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P22329 P22329 enables GO:0042803 PMID:2605226 IDA F Red-sensitive opsin protein taxon:9031 20150604 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P22329 P22329 involved_in GO:0070207 PMID:2605226 IDA P Red-sensitive opsin protein taxon:9031 20150604 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P30371 TGFB2 enables GO:0042803 PMID:10401723 ISA UniProtKB:P61812 F Transforming growth factor beta-2 proprotein TGFB2 protein taxon:9031 20090424 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P38529 HSF1 enables GO:0042803 PMID:9716376 IDA F Heat shock factor protein 1 HSF1 protein taxon:9031 20151228 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P38529 HSF1 involved_in GO:0070207 PMID:9716376 IDA P Heat shock factor protein 1 HSF1 protein taxon:9031 20151228 AgBase happens_during(GO:0010243),happens_during(GO:0014070) `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P38530 HSF2 enables GO:0042803 PMID:9716376 IDA F Heat shock factor protein 2 HSF2 protein taxon:9031 20151228 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P38530 HSF2 involved_in GO:0070207 PMID:9716376 IDA P Heat shock factor protein 2 HSF2 protein taxon:9031 20151228 AgBase happens_during(GO:0010243),happens_during(GO:0014070) `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P38531 HSF3 enables GO:0042803 PMID:21813737 IDA F Heat shock factor protein 3 HSF3 protein taxon:9031 20151224 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P38531 HSF3 enables GO:0042803 PMID:9716376 IDA F Heat shock factor protein 3 HSF3 protein taxon:9031 20151228 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P38531 HSF3 involved_in GO:0070207 PMID:21813737 IDA P Heat shock factor protein 3 HSF3 protein taxon:9031 20151224 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P38531 HSF3 involved_in GO:0070207 PMID:9716376 IDA P Heat shock factor protein 3 HSF3 protein taxon:9031 20151228 AgBase happens_during(GO:0010243),happens_during(GO:0014070) `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P49140 SKI enables GO:0042803 PMID:9927733 IMP F Ski oncogene SKI protein taxon:9031 20150414 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q90827 NEL enables GO:0043621 PMID:22157752 IDA F Protein NEL NEL protein taxon:9031 20210227 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q90ZK6 ACVR1 enables GO:0042803 PMID:10885742 ISA UniProtKB:Q04771 F Activin receptor type-1 ACVR1 protein taxon:9031 20090113 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q98953 S100A6 enables GO:0042803 PMID:8925441 IDA F Protein S100-A6 S100A6 protein taxon:9031 20150421 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q9DG23 BVES involved_in GO:0051260 PMID:12815060 IDA P Blood vessel epicardial substance BVES|POP1|POPDC1 protein taxon:9031 20150402 AgBase `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q9IA05 FZD4 enables GO:0042803 PMID:11044615 ISO UniProtKB:Q9ULV1 F Frizzled-4 FZD4|FZ4 protein taxon:9031 20120809 AgBase `

gorule-0000061

Allowed gene product to term relations (gp2term)

• total: 1

messages

• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002325 should be one of BFO:0000050. Repaired to BFO:0000050--`UniProtKB P67881 CYC colocalizes_with GO:0043293 PMID:12220121 IDA C Cytochrome c CYC protein taxon:9031 20110427 AgBase `