This report generated on 2024-01-05
!gpa-version: 1.1
!collation date: 2024-01-05
!collated from production models in https://github.com/geneontology/noctua-models/ where col1 matches xenbase; special rules for MGI (https://github.com/geneontology/pipeline/issues/313)
Xenbase XB-GENE-865846 acts_upstream_of_or_within GO:0016477 PMID: 28427856 ECO:0007752 20201119 Xenbase occurs_in(XAO:0001001) model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-1217556 acts_upstream_of_or_within_positive_effect GO:0016477 PMID: 28427856 ECO:0007752 20201119 Xenbase occurs_in(XAO:0001001) model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-17336014 acts_upstream_of_or_within_positive_effect GO:0016477 PMID: 28427856 ECO:0007752 20201119 Xenbase occurs_in(XAO:0001001) model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-864947 acts_upstream_of_or_within GO:0001654 PMID:28501477 ECO:0000315 XB-six6.S gRNA1: XB-GRNA-29209218 20231208 Xenbase model-state=production|noctua-model-id=gomodel:65692e7e00001353|contributor=https://orcid.org/0000-0001-5495-4588Xenbase XB-GENE-17337584 acts_upstream_of_or_within GO:0001654 PMID:28501477 ECO:0000315 XB-six6.S gRNA1: GRNA-29209218 20231208 Xenbase model-state=production|noctua-model-id=gomodel:65692e7e00001353|contributor=https://orcid.org/0000-0001-5495-4588Xenbase XB-GENE-6486473 acts_upstream_of_or_within GO:0048557 PMID:38152138 ECO:0000315 XENBASE: XB-GRNA-29209332 20240103 Xenbase model-state=production|noctua-model-id=gomodel:657ba49f00000796|contributor=https://orcid.org/0000-0001-5495-4588Xenbase XB-GENE-17340943 acts_upstream_of_or_within GO:0007258 PMID:16026968 ECO:0006063 20181026 Xenbase noctua-model-id=gomodel:5a7e68a100000628|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Xenbase XB-GENE-483735 acts_upstream_of_or_within GO:0007258 PMID:16026968 ECO:0006063 20190411 Xenbase noctua-model-id=gomodel:5a7e68a100000628|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Xenbase XB-GENE-1012570 acts_upstream_of_positive_effect GO:0048518 PMID:33999995 ECO:0006063 20220513 Xenbase positively_regulates(GO:0036032) noctua-model-id=gomodel:627d95ee00000126|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Xenbase XB-GENE-1012570 acts_upstream_of_positive_effect GO:0048518 PMID:33999995 ECO:0006051 Xenbase:XB-MORPHOLINO-23622781 20220513 Xenbase positively_regulates(GO:0036032) noctua-model-id=gomodel:627d95ee00000126|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Xenbase XB-GENE-1012570 acts_upstream_of_positive_effect GO:0048518 PMID:33999995 ECO:0006051 Xenbase:XB-MORPHOLINO-23622782 20220513 Xenbase positively_regulates(GO:0036032) noctua-model-id=gomodel:627d95ee00000126|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Xenbase XB-GENE-487200 enables GO:0008134 PMID:32894225 ECO:0006051 Xenbase:XB-MORPHOLINO-17249330 20220613 Xenbase part_of(GO:1904837) noctua-model-id=gomodel:62900b6400001096|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Xenbase XB-GENE-6488002 acts_upstream_of_or_within_negative_effect GO:0006468 PMID:32859582 ECO:0000314 20230711 Xenbase has_input(Xenbase:XB-GENE-17332607) model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:62900b6400002070Xenbase XB-GENE-17337757 enables GO:0060725 PMID:20858598 ECO:0006063 20231219 Xenbase noctua-model-id=gomodel:62b4ffe300003420|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Xenbase XB-GENE-5846983 enables GO:1904929 PMID:28427856 ECO:0007752 20230302 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-865024 enables GO:0005109 PMID:21873635 ECO:0000318 PANTHER:PTN000093831 20201118 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-17331693 enables GO:0003723 PMID:21873635 ECO:0000318 PANTHER:PTN000259535 20201116 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-17331921 enables GO:0005109 PMID:21873635 ECO:0000318 PANTHER:PTN000246517 20201118 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-483735 enables GO:0042813 PMID:21873635 ECO:0000318 PANTHER:PTN000139394 20201118 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-865070 enables GO:0042813 PMID:21873635 ECO:0000318 PANTHER:PTN000139394 20201116 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-483735 enables GO:0017147 PMID:21873635 ECO:0000318 PANTHER:PTN000139394 20201118 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-852934 enables GO:0005096 GO_REF:0000024 ECO:0000318 PANTHER:PTN001141948 20201119 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-17336014 enables GO:0072518 GO_REF:0000024 ECO:0000318 PANTHER:PTN000542090 20201119 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-6251681 enables GO:0001968 GO_REF:0000050 ECO:0000318 UniProtKB:P34901 20201118 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-489012 enables GO:0003924 PMID:21873635 ECO:0000318 PANTHER:PTN000632671 20201118 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-1217556 enables GO:0004705 GO_REF:0000024 ECO:0000318 PANTHER:PTN001171982 20201119 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Xenbase XB-GENE-865846 enables GO:0019901 GO_REF:0000024 ECO:0000318 PANTHER:PTN001530052 20201118 Xenbase model-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- Xenbase XB-GENE-22169574 part_of GO:0005886 PMID:31644900 ECO:0001175 20200415 Xenbase noctua-model-id=gomodel:5e72450500001671|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- Xenbase XB-GENE-22169574 part_of GO:0005886 PMID:31644900 ECO:0005804 20200415 Xenbase noctua-model-id=gomodel:5e72450500001671|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- Xenbase XB-GENE-982709 part_of GO:0005770 PMID:30612743 ECO:0007719 20200619 Xenbase model-state=production|noctua-model-id=gomodel:5ed1aab700000170|contributor=https://orcid.org/0000-0003-1074-8103Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- Xenbase XB-GENE-6486172 part_of GO:0036064 PMID:32482850 ECO:0005804 20200618 Xenbase part_of(XAO:0005179) model-state=production|contributor=https://orcid.org/0000-0001-5495-4588|noctua-model-id=gomodel:5ee8120100000340Only certain gene product to term relations are allowed for a given GO term but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050 -- Xenbase XB-GENE-5782073 is_active_in GO:0000785 PMID:31936777 ECO:0000266 20210909 Xenbase noctua-model-id=gomodel:61283a3000000756|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588Only certain gene product to term relations are allowed for a given GO term but was repaired: RO:0002327 should be one of RO:0004032, RO:0004034, RO:0004035, RO:0002263, RO:0002264, RO:0002331, RO:0004033. Repaired to RO:0002264 -- Xenbase XB-GENE-17337757 enables GO:0060725 PMID:20858598 ECO:0006063 20231219 Xenbase noctua-model-id=gomodel:62b4ffe300003420|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Only certain gene product to term relations are allowed for a given GO term but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050 -- Xenbase XB-GENE-940037 is_active_in GO:0098797 PMID:34806749 ECO:0001163 20230509 Xenbase noctua-model-id=gomodel:6446bfcb00001289|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103Only certain gene product to term relations are allowed for a given GO term but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050 -- Xenbase XB-GENE-6251797 is_active_in GO:0098797 PMID:34806749 ECO:0007719 20230509 Xenbase noctua-model-id=gomodel:6446bfcb00001289|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103