GORULE violations assigned by pseudocap

Contents

gorule-0000013 Taxon-appropriate annotation check

gorule-0000065 Annotations to term that are candidates for obsoletion should be produce a warning

MESSAGES

gorule-0000013

Taxon-appropriate annotation check

• total: 10

messages

• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB G3XCV0 fleQ involved_in GO:2000155 PMID:12218010 IMP P Transcriptional regulator FleQ fleQ|PA1097 protein taxon:208964 20190311 PseudoCAP UniProtKB:G3XCV0 `
• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB G3XD58 wzt located_in GO:0070258 PMID:23223798 EXP C ABC transporter domain-containing protein wzt|PA5450 protein taxon:208964 20190311 PseudoCAP UniProtKB:G3XD58 `
• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB Q03023 aprA involved_in GO:0001869 PMID:22131330 IDA P Serralysin aprA|PA1249 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q03023 `
• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB Q03023 aprA involved_in GO:0045959 PMID:22131330 IDA P Serralysin aprA|PA1249 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q03023 `
• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB Q9HT24 glmR involved_in GO:0045724 PMID:14982774 IMP P HTH deoR-type domain-containing protein glmR|PA5550 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HT24 `
• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB Q9HTB8 wzm located_in GO:0070258 PMID:23223798 EXP C Transport permease protein wzm|PA5451 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HTB8 `
• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB Q9I3I1 dnaX part_of GO:0043846 PMID:15611049 IDA C DNA polymerase III subunit gamma/tau dnaX|PA1532 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9I3I1 `
• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB Q9I3K2 PA1510 involved_in GO:0006914 PMID:27477276 EXP P Alpha/beta hydrolase PA1510 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9I3K2 `
• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB Q9I4N3 fleR involved_in GO:2000155 PMID:7591148 IMP P Response regulator protein FleR fleR|PA1099 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9I4N3 `
• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`UniProtKB Q9I6R8 PA0220 involved_in GO:0051615 PMID:18833300 IMP P Amino acid APC family transporter PA0220 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9I6R8 `

gorule-0000065

Annotations to term that are candidates for obsoletion should be produce a warning

• total: 30

messages

• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB G3XCT7 ampG involved_in GO:0033252 PMID:20713660 IMP P AmpG ampG|PA4393 protein taxon:208964 20190311 PseudoCAP UniProtKB:G3XCT7 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB G3XCU9 PA2020 involved_in GO:0032410 PMID:15105120 IMP P HTH tetR-type domain-containing protein PA2020 protein taxon:208964 20190311 PseudoCAP UniProtKB:G3XCU9 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB G3XCW6 dnr involved_in GO:0051353 PMID:9767567 IMP P Transcriptional regulator Dnr dnr|PA0527 protein taxon:208964 20190311 PseudoCAP UniProtKB:G3XCW6 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB G3XCW9 ampD involved_in GO:0033252 PMID:9835532 IMP P 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD ampD|PA4522 protein taxon:208964 20190311 PseudoCAP UniProtKB:G3XCW9 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB G3XD16 PA2523 involved_in GO:0032411 PMID:14679195 IMP P Probable two-component response regulator PA2523 protein taxon:208964 20190311 PseudoCAP UniProtKB:G3XD16 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB O85732 fmt involved_in GO:0022898 PMID:19786597 IMP P Methionyl-tRNA formyltransferase fmt|PA0018 protein taxon:208964 20190311 PseudoCAP UniProtKB:O85732 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB P10932 amiR involved_in GO:0051345 PMID:2513374 IMP P Aliphatic amidase regulator amiR|PA3363 protein taxon:208964 20190311 PseudoCAP UniProtKB:P10932 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB P22610 pilD involved_in GO:0006480 PMID:23255525 IDA P Prepilin leader peptidase/N-methyltransferase pilD|xcpA|PA4528 protein taxon:208964 20190311 PseudoCAP UniProtKB:P22610 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB P23926 anr involved_in GO:0051353 PMID:9767567 IMP P Transcriptional activator protein anr anr|PA1544 protein taxon:208964 20190311 PseudoCAP UniProtKB:P23926 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB P24735 ampC involved_in GO:0033252 PMID:8405939 IDA P Beta-lactamase ampC|PA4110 protein taxon:208964 20190311 PseudoCAP UniProtKB:P24735 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB P27017 amiC involved_in GO:0051346 PMID:10893220 IDA P Aliphatic amidase expression-regulating protein amiC|PA3364 protein taxon:208964 20190311 PseudoCAP UniProtKB:P27017 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB P32265 nfxB involved_in GO:0032410 PMID:20373734 IMP P HTH-type transcriptional regulator NfxB nfxB|PA4600 protein taxon:208964 20190311 PseudoCAP UniProtKB:P32265 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB P32265 nfxB involved_in GO:0032410 PMID:8878035 IMP P HTH-type transcriptional regulator NfxB nfxB|PA4600 protein taxon:208964 20190311 PseudoCAP UniProtKB:P32265 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB P53593 sucC involved_in GO:0046777 PMID:10671455 IDA P Succinate--CoA ligase [ADP-forming] subunit beta sucC|PA1588 protein taxon:208964 20190311 PseudoCAP UniProtKB:P53593 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q03456 fur involved_in GO:1901668 PMID:8763923 IMP P Ferric uptake regulation protein fur|PA4764 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q03456 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HT86 ampDh2 involved_in GO:0033252 PMID:23510438 IDA P N-acetylmuramoyl-L-alanine amidase ampDh2|PA5485 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HT86 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HT99 PA5471 involved_in GO:0032411 PMID:16484195 IMP P 3'-phosphate/5'-hydroxy nucleic acid ligase PA5471 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HT99 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HTI4 gbdR involved_in GO:0010518 PMID:19103776 IMP P HTH-type transcriptional regulator GbdR gbdR|PA5380 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HTI4 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HTI4 gbdR involved_in GO:0010922 PMID:19103776 IMP P HTH-type transcriptional regulator GbdR gbdR|PA5380 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HTI4 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HTL4 oxyR involved_in GO:1901671 PMID:19926657 IMP P HTH lysR-type domain-containing protein oxyR|PA5344 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HTL4 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HWG8 PA4218 involved_in GO:0033252 PMID:21192796 IDA P Probable transporter PA4218 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HWG8 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HWX1 nrdR involved_in GO:0051354 PMID:25909779 IMP P Transcriptional repressor NrdR nrdR|PA4057 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HWX1 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HXS0 nalC involved_in GO:0032410 PMID:15387820 IMP P HTH tetR-type domain-containing protein nalC|PA3721 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HXS0 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HXS2 armR involved_in GO:0032411 PMID:15387820 IMP P Antirepressor for MexR, ArmR armR|PA3719 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HXS2 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9HY46 nalD involved_in GO:0032410 PMID:17028276 IMP P HTH tetR-type domain-containing protein nalD|PA3574 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9HY46 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9I3S2 gbuR involved_in GO:0051345 PMID:12029055 IMP P HTH lysR-type domain-containing protein gbuR|PA1422 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9I3S2 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9I4X0 mvfR involved_in GO:0051349 PMID:14739337 IMP P Multiple virulence factor regulator MvfR mvfR|PA1003 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9I4X0 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9I5D1 ampDh3 involved_in GO:0033252 PMID:23510438 IDA P N-acetylmuramoyl-L-alanine amidase ampDh3|PA0807 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9I5D1 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9I6J7 aguR involved_in GO:0051346 PMID:11673419 IMP P HTH tetR-type domain-containing protein aguR|PA0294 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9I6J7 `
• WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`UniProtKB Q9I6K1 gpuR involved_in GO:0051345 PMID:16339950 IDA P HTH lysR-type domain-containing protein gpuR|PA0289 protein taxon:208964 20190311 PseudoCAP UniProtKB:Q9I6K1 `