GO:0007010	cytoskeleton organization	AnnotationPropagation	P	GO:0005200	structural constituent of cytoskeleton	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0042626	ATPase-coupled transmembrane transporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:0010498	proteasomal protein catabolic process	AnnotationPropagation	P	GO:0036402	proteasome-activating activity	IBA
GO:0098655	monoatomic cation transmembrane transport	AnnotationPropagation	P	GO:0005227	calcium-activated cation channel activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0034498	early endosome to Golgi transport	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0035673	oligopeptide transmembrane transporter activity	IBA
GO:0006366	transcription by RNA polymerase II	AnnotationPropagation	P	GO:0016251	RNA polymerase II general transcription initiation factor activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0015718	monocarboxylic acid transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:0015812	gamma-aminobutyric acid transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:1905039	carboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0015185	gamma-aminobutyric acid transmembrane transporter activity	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0006633	fatty acid biosynthetic process	AnnotationPropagation	P	GO:0000036	acyl carrier activity	IBA
GO:1990822	basic amino acid transmembrane transport	AnnotationPropagation	P	GO:0015174	basic amino acid transmembrane transporter activity	IBA
GO:0033214	siderophore-iron import into cell	AnnotationPropagation	P	GO:0015343	siderophore-iron transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015343	siderophore-iron transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0015851	nucleobase transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070183	mitochondrial tryptophanyl-tRNA aminoacylation	IBA
GO:0098734	macromolecule depalmitoylation	AnnotationPropagation	P	GO:0008474	palmitoyl-(protein) hydrolase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034553	mitochondrial respiratory chain complex II assembly	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0035725	sodium ion transmembrane transport	AnnotationPropagation	P	GO:0005436	sodium:phosphate symporter activity	IBA
GO:1901679	nucleotide transmembrane transport	AnnotationPropagation	P	GO:0005471	ATP:ADP antiporter activity	IBA
GO:0015867	ATP transport	AnnotationPropagation	P	GO:0005471	ATP:ADP antiporter activity	IBA
GO:0015866	ADP transport	AnnotationPropagation	P	GO:0005471	ATP:ADP antiporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0098656	monoatomic anion transmembrane transport	AnnotationPropagation	P	GO:0008308	voltage-gated monoatomic anion channel activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:0016192	vesicle-mediated transport	AnnotationPropagation	P	GO:0035615	clathrin-cargo adaptor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045040	protein insertion into mitochondrial outer membrane	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0016192	vesicle-mediated transport	AnnotationPropagation	P	GO:0035615	clathrin-cargo adaptor activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0043998	histone H2A acetyltransferase activity	IBA
GO:0019344	L-cysteine biosynthetic process	AnnotationPropagation	P	GO:0004124	cysteine synthase activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	AnnotationPropagation	P	GO:0002196	Ser-tRNA(Ala) deacylase activity	IBA
GO:0051168	nuclear export	AnnotationPropagation	P	GO:0005049	nuclear export signal receptor activity	IBA
GO:0006096	glycolytic process	AnnotationPropagation	P	GO:0004743	pyruvate kinase activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0000226	microtubule cytoskeleton organization	AnnotationPropagation	P	GO:0008568	microtubule severing ATPase activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0046969	histone H3K9 deacetylase activity, NAD-dependent	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0035434	copper ion transmembrane transport	AnnotationPropagation	P	GO:0140581	P-type monovalent copper transporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0045944	positive regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IBA
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0035673	oligopeptide transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034553	mitochondrial respiratory chain complex II assembly	IBA
GO:1990570	GDP-mannose transmembrane transport	AnnotationPropagation	P	GO:0005458	GDP-mannose transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0007010	cytoskeleton organization	AnnotationPropagation	P	GO:0005200	structural constituent of cytoskeleton	IBA
GO:0000316	sulfite transmembrane transport	AnnotationPropagation	P	GO:0000319	sulfite transmembrane transporter activity	IBA
GO:0000122	negative regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	IBA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0032542	sulfiredoxin activity	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071039	nuclear polyadenylation-dependent CUT catabolic process	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:1990050	phosphatidic acid transfer activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:1990050	phosphatidic acid transfer activity	IBA
GO:0010998	regulation of translational initiation by eIF2 alpha phosphorylation	AnnotationPropagation	P	GO:0004694	eukaryotic translation initiation factor 2alpha kinase activity	IBA
GO:0006355	regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0051726	regulation of cell cycle	AnnotationPropagation	P	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034553	mitochondrial respiratory chain complex II assembly	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0035269	protein O-linked glycosylation via mannose	AnnotationPropagation	P	GO:0004169	dolichyl-phosphate-mannose-protein mannosyltransferase activity	IBA
GO:0015741	fumarate transport	AnnotationPropagation	P	GO:0005469	succinate:fumarate antiporter activity	IBA
GO:0071422	succinate transmembrane transport	AnnotationPropagation	P	GO:0005469	succinate:fumarate antiporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0071806	protein transmembrane transport	AnnotationPropagation	P	GO:0008320	transmembrane protein transporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0016192	vesicle-mediated transport	AnnotationPropagation	P	GO:0035615	clathrin-cargo adaptor activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0031151	histone H3K79 methyltransferase activity	IBA
GO:0015791	polyol transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0015798	myo-inositol transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0072334	UDP-galactose transmembrane transport	AnnotationPropagation	P	GO:0005459	UDP-galactose transmembrane transporter activity	IBA
GO:0006278	RNA-templated DNA biosynthetic process	AnnotationPropagation	P	GO:0003964	RNA-directed DNA polymerase activity	IBA
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:1990050	phosphatidic acid transfer activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:1990050	phosphatidic acid transfer activity	IBA
GO:0006833	water transport	AnnotationPropagation	P	GO:0015250	water channel activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015250	water channel activity	IBA
GO:0000160	phosphorelay signal transduction system	AnnotationPropagation	P	GO:0000155	phosphorelay sensor kinase activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:0000781	chromosome, telomeric region	AnnotationPropagation	C	GO:0031509	subtelomeric heterochromatin formation	IBA
GO:0015909	long-chain fatty acid transport	AnnotationPropagation	P	GO:0005324	long-chain fatty acid transmembrane transporter activity	IBA
GO:1905039	carboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0005324	long-chain fatty acid transmembrane transporter activity	IBA
GO:0034204	lipid translocation	AnnotationPropagation	P	GO:0140326	ATPase-coupled intramembrane lipid carrier activity	IBA
GO:0098656	monoatomic anion transmembrane transport	AnnotationPropagation	P	GO:0008308	voltage-gated monoatomic anion channel activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0045944	positive regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0042776	proton motive force-driven mitochondrial ATP synthesis	IBA
GO:0070778	L-aspartate transmembrane transport	AnnotationPropagation	P	GO:0015183	L-aspartate transmembrane transporter activity	IBA
GO:0061025	membrane fusion	AnnotationPropagation	P	GO:0005484	SNAP receptor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	IBA
GO:1902047	polyamine transmembrane transport	AnnotationPropagation	P	GO:0015203	polyamine transmembrane transporter activity	IBA
GO:0051170	import into nucleus	AnnotationPropagation	P	GO:0061608	nuclear import signal receptor activity	IBA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0006325	chromatin organization	AnnotationPropagation	P	GO:0140463	chromatin-protein adaptor activity	IBA
GO:0015746	citrate transport	AnnotationPropagation	P	GO:0071913	citrate secondary active transmembrane transporter activity	IBA
GO:0035674	tricarboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0071913	citrate secondary active transmembrane transporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0051170	import into nucleus	AnnotationPropagation	P	GO:0061608	nuclear import signal receptor activity	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0098655	monoatomic cation transmembrane transport	AnnotationPropagation	P	GO:0008324	monoatomic cation transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032979	protein insertion into mitochondrial inner membrane from matrix	IBA
GO:0098655	monoatomic cation transmembrane transport	AnnotationPropagation	P	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IBA
GO:1903711	spermidine transmembrane transport	AnnotationPropagation	P	GO:0015606	spermidine transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070184	mitochondrial tyrosyl-tRNA aminoacylation	IBA
GO:0000122	negative regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	IBA
GO:0051170	import into nucleus	AnnotationPropagation	P	GO:0061608	nuclear import signal receptor activity	IBA
GO:0071897	DNA biosynthetic process	AnnotationPropagation	P	GO:0003887	DNA-directed DNA polymerase activity	IBA
GO:0015706	nitrate transmembrane transport	AnnotationPropagation	P	GO:0015513	high-affinity secondary active nitrite transmembrane transporter activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0004407	histone deacetylase activity	IBA
GO:0051170	import into nucleus	AnnotationPropagation	P	GO:0061608	nuclear import signal receptor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045039	protein insertion into mitochondrial inner membrane	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0035269	protein O-linked glycosylation via mannose	AnnotationPropagation	P	GO:0004169	dolichyl-phosphate-mannose-protein mannosyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070124	mitochondrial translational initiation	IBA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0008379	thioredoxin peroxidase activity	IBA
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0015421	ABC-type oligopeptide transporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0140750	nucleosome array spacer activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0045944	positive regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0071423	malate transmembrane transport	AnnotationPropagation	P	GO:0015140	malate transmembrane transporter activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:1903424	fluoride transmembrane transport	AnnotationPropagation	P	GO:1903425	fluoride transmembrane transporter activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0032931	histone H3K56 acetyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070124	mitochondrial translational initiation	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:1901679	nucleotide transmembrane transport	AnnotationPropagation	P	GO:0005347	ATP transmembrane transporter activity	IBA
GO:0015867	ATP transport	AnnotationPropagation	P	GO:0005347	ATP transmembrane transporter activity	IBA
GO:0034755	iron ion transmembrane transport	AnnotationPropagation	P	GO:0015093	ferrous iron transmembrane transporter activity	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0033621	nuclear mRNA surveillance of meiosis-specific transcripts	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0006355	regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0071806	protein transmembrane transport	AnnotationPropagation	P	GO:0008320	transmembrane protein transporter activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0015385	sodium:proton antiporter activity	IBA
GO:0035725	sodium ion transmembrane transport	AnnotationPropagation	P	GO:0015385	sodium:proton antiporter activity	IBA
GO:0098655	monoatomic cation transmembrane transport	AnnotationPropagation	P	GO:0005227	calcium-activated cation channel activity	IBA
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:0120014	phospholipid transfer activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0120014	phospholipid transfer activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0008379	thioredoxin peroxidase activity	IBA
GO:0046901	tetrahydrofolylpolyglutamate biosynthetic process	AnnotationPropagation	P	GO:0004326	tetrahydrofolylpolyglutamate synthase activity	IBA
GO:0006355	regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:1902475	L-alpha-amino acid transmembrane transport	AnnotationPropagation	P	GO:0015179	L-amino acid transmembrane transporter activity	IBA
GO:0015828	tyrosine transport	AnnotationPropagation	P	GO:0005302	L-tyrosine transmembrane transporter activity	IBA
GO:1902475	L-alpha-amino acid transmembrane transport	AnnotationPropagation	P	GO:0005302	L-tyrosine transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0045944	positive regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004601	peroxidase activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0089722	phosphoenolpyruvate transmembrane transport	AnnotationPropagation	P	GO:0089721	phosphoenolpyruvate transmembrane transporter activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	IBA
GO:0036092	phosphatidylinositol-3-phosphate biosynthetic process	AnnotationPropagation	P	GO:0043813	phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	IBA
GO:0006366	transcription by RNA polymerase II	AnnotationPropagation	P	GO:0016251	RNA polymerase II general transcription initiation factor activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0017136	histone deacetylase activity, NAD-dependent	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015297	antiporter activity	IBA
GO:1990822	basic amino acid transmembrane transport	AnnotationPropagation	P	GO:0015174	basic amino acid transmembrane transporter activity	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	IBA
GO:0006657	CDP-choline pathway	AnnotationPropagation	P	GO:0004103	choline kinase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:1990799	mitochondrial tRNA wobble position uridine thiolation	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0006833	water transport	AnnotationPropagation	P	GO:0015250	water channel activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015250	water channel activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0010485	histone H4 acetyltransferase activity	IBA
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0015079	potassium ion transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0005783	endoplasmic reticulum	AnnotationPropagation	C	GO:0006621	protein retention in ER lumen	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045039	protein insertion into mitochondrial inner membrane	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0008379	thioredoxin peroxidase activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0035434	copper ion transmembrane transport	AnnotationPropagation	P	GO:0005375	copper ion transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0051596	methylglyoxal catabolic process	AnnotationPropagation	P	GO:0019172	glyoxalase III activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071031	nuclear mRNA surveillance of mRNA 3'-end processing	IBA
GO:0007010	cytoskeleton organization	AnnotationPropagation	P	GO:0005200	structural constituent of cytoskeleton	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:1903830	magnesium ion transmembrane transport	AnnotationPropagation	P	GO:0015095	magnesium ion transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0005315	phosphate transmembrane transporter activity	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:1902969	mitotic DNA replication	IBA
GO:0046710	GDP metabolic process	AnnotationPropagation	P	GO:0004385	GMP kinase activity	IBA
GO:0046037	GMP metabolic process	AnnotationPropagation	P	GO:0004385	GMP kinase activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0022904	respiratory electron transport chain	AnnotationPropagation	P	GO:0004174	electron-transferring-flavoprotein dehydrogenase activity	IBA
GO:1903790	guanine nucleotide transmembrane transport	AnnotationPropagation	P	GO:0001409	guanine nucleotide transmembrane transporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0036261	7-methylguanosine cap hypermethylation	AnnotationPropagation	P	GO:0071164	RNA cap trimethylguanosine synthase activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:1901679	nucleotide transmembrane transport	AnnotationPropagation	P	GO:0015217	ADP transmembrane transporter activity	IBA
GO:0015866	ADP transport	AnnotationPropagation	P	GO:0015217	ADP transmembrane transporter activity	IBA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071028	nuclear mRNA surveillance	IBA
GO:0007010	cytoskeleton organization	AnnotationPropagation	P	GO:0005200	structural constituent of cytoskeleton	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0006624	vacuolar protein processing	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0071421	manganese ion transmembrane transport	AnnotationPropagation	P	GO:0005384	manganese ion transmembrane transporter activity	IBA
GO:0042823	pyridoxal 5'-phosphate biosynthetic process	AnnotationPropagation	P	GO:0004733	pyridoxamine phosphate oxidase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0097250	mitochondrial respirasome assembly	IBA
GO:0015813	L-glutamate transmembrane transport	AnnotationPropagation	P	GO:0005313	L-glutamate transmembrane transporter activity	IBA
GO:0072488	ammonium transmembrane transport	AnnotationPropagation	P	GO:0008519	ammonium channel activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0042800	histone H3K4 methyltransferase activity	IBA
GO:0000165	MAPK cascade	AnnotationPropagation	P	GO:0004708	MAP kinase kinase activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0000122	negative regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	IBA
GO:0070778	L-aspartate transmembrane transport	AnnotationPropagation	P	GO:0015183	L-aspartate transmembrane transporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	IBA
GO:0007010	cytoskeleton organization	AnnotationPropagation	P	GO:0005200	structural constituent of cytoskeleton	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071039	nuclear polyadenylation-dependent CUT catabolic process	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0015851	nucleobase transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process	IBA
GO:0016192	vesicle-mediated transport	AnnotationPropagation	P	GO:0035615	clathrin-cargo adaptor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0006264	mitochondrial DNA replication	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0008559	ABC-type xenobiotic transporter activity	IBA
GO:0042908	xenobiotic transport	AnnotationPropagation	P	GO:0008559	ABC-type xenobiotic transporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0006895	Golgi to endosome transport	IBA
GO:0006366	transcription by RNA polymerase II	AnnotationPropagation	P	GO:0016251	RNA polymerase II general transcription initiation factor activity	IBA
GO:0000781	chromosome, telomeric region	AnnotationPropagation	C	GO:0031509	subtelomeric heterochromatin formation	IBA
GO:0071806	protein transmembrane transport	AnnotationPropagation	P	GO:0008320	transmembrane protein transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070159	mitochondrial threonyl-tRNA aminoacylation	IBA
GO:0071806	protein transmembrane transport	AnnotationPropagation	P	GO:0008320	transmembrane protein transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0072670	mitochondrial tRNA threonylcarbamoyladenosine modification	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0042823	pyridoxal 5'-phosphate biosynthetic process	AnnotationPropagation	P	GO:0004733	pyridoxamine phosphate oxidase activity	IBA
GO:0036092	phosphatidylinositol-3-phosphate biosynthetic process	AnnotationPropagation	P	GO:0043813	phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	IBA
GO:0006868	L-glutamine transport	AnnotationPropagation	P	GO:0015186	L-glutamine transmembrane transporter activity	IBA
GO:1902475	L-alpha-amino acid transmembrane transport	AnnotationPropagation	P	GO:0015186	L-glutamine transmembrane transporter activity	IBA
GO:0010498	proteasomal protein catabolic process	AnnotationPropagation	P	GO:0036402	proteasome-activating activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015297	antiporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0015793	glycerol transmembrane transport	AnnotationPropagation	P	GO:0015254	glycerol channel activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0015079	potassium ion transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial respiratory chain complex IV assembly	IBA
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0140107	high-affinity potassium ion transmembrane transporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:1901679	nucleotide transmembrane transport	AnnotationPropagation	P	GO:0015218	pyrimidine nucleotide transmembrane transporter activity	IBA
GO:0006864	pyrimidine nucleotide transport	AnnotationPropagation	P	GO:0015218	pyrimidine nucleotide transmembrane transporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0008645	hexose transmembrane transport	AnnotationPropagation	P	GO:0015149	hexose transmembrane transporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0006624	vacuolar protein processing	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005933	cellular bud	FoldBasedPredictor	GO:0071944	cell periphery	part_of	GO:0005933	cellular bud	existence_overlaps	GO:0000089	mitotic metaphase	HDA