GORULE violations assigned by ARUK-UCL

Contents

gorule-0000008 No annotations should be made to uninformative high level terms

gorule-0000046 The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

• total: 13

messages

• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`MGI MGI:101924 Slc12a2 located_in GO:0042995 PMID:11940530 IDA C solute carrier family 12, member 2 Nkcc1|mBSC2|sodium/potassium/chloride cotransporters|sy-ns protein NCBITaxon:10090 20200120 ARUK-UCL part_of(CL:0002605),part_of(UBERON:0000956) MGI:MGI:101924 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`MGI MGI:88106 Atp1a2 located_in GO:0042995 PMID:12458206 IDA C ATPase, Na+/K+ transporting, alpha 2 polypeptide Atpa-3 protein NCBITaxon:10090 20190917 ARUK-UCL part_of(UBERON:0000955) MGI:MGI:88106 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`MGI MGI:88106 Atp1a2 located_in GO:0042995 PMID:12805306 IDA C ATPase, Na+/K+ transporting, alpha 2 polypeptide Atpa-3 protein NCBITaxon:10090 20190917 ARUK-UCL part_of(UBERON:0001876),part_of(UBERON:0002606)|part_of(UBERON:0004725),part_of(UBERON:0002606) MGI:MGI:88106 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`RGD 2927 Itgb1 involved_in GO:0030030 PMID:20091784 IMP P integrin subunit beta 1 protein NCBITaxon:10116 20180521 ARUK-UCL part_of(GO:0071318),occurs_in(CL:0000129)|part_of(GO:0071415),occurs_in(CL:0000129) RGD:2927 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`RGD 620458 Cx3cl1 located_in GO:0042995 PMID:11870871 IDA C C-X3-C motif chemokine ligand 1 protein NCBITaxon:10116 20180605 ARUK-UCL part_of(CL:0000127) RGD:620458 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`RGD 621814 Slc2a13 located_in GO:0042995 PMID:19607714 IDA C solute carrier family 2 member 13 protein NCBITaxon:10116 20200225 ARUK-UCL part_of(UBERON:0000955),part_of(UBERON:0000956) RGD:621814 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P05556 ITGB1 involved_in GO:0030030 GO_REF:0000024 ISS UniProtKB:P49134 P Integrin beta-1 ITGB1|FNRB|MDF2|MSK12 protein taxon:9606 20180522 ARUK-UCL part_of(GO:0071318),occurs_in(CL:0000129)|part_of(GO:0071415),occurs_in(CL:0000129) UniProtKB:P05556 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P50993 ATP1A2 located_in GO:0042995 GO_REF:0000024 ISS UniProtKB:Q6PIE5 C Sodium/potassium-transporting ATPase subunit alpha-2 ATP1A2|KIAA0778 protein taxon:9606 20190917 ARUK-UCL part_of(UBERON:0000955) UniProtKB:P50993 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P50993 ATP1A2 located_in GO:0042995 GO_REF:0000024 ISS UniProtKB:Q6PIE5 C Sodium/potassium-transporting ATPase subunit alpha-2 ATP1A2|KIAA0778 protein taxon:9606 20190917 ARUK-UCL part_of(UBERON:0001876),part_of(UBERON:0002606)|part_of(UBERON:0004725),part_of(UBERON:0002606) UniProtKB:P50993 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P55011 SLC12A2 located_in GO:0042995 GO_REF:0000024 ISS UniProtKB:P55012 C Solute carrier family 12 member 2 SLC12A2|NKCC1 protein taxon:9606 20200120 ARUK-UCL part_of(CL:0002605),part_of(UBERON:0000956) UniProtKB:P55011 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P78423 CX3CL1 located_in GO:0042995 GO_REF:0000024 ISS UniProtKB:O55145 C Fractalkine CX3CL1|FKN|NTT|SCYD1|A-152E5.2 protein taxon:9606 20180605 ARUK-UCL part_of(CL:0000127) UniProtKB:P78423 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q96QE2 SLC2A13 located_in GO:0042995 PMID:19607714 IDA C Proton myo-inositol cotransporter SLC2A13 protein taxon:9606 20200225 ARUK-UCL part_of(UBERON:0000955),part_of(UBERON:0002421)|part_of(UBERON:0000955),part_of(UBERON:0010225)|part_of(UBERON:0000955),part_of(UBERON:0000956) UniProtKB:Q96QE2 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9H244 P2RY12 involved_in GO:0030030 GO_REF:0000024 ISS UniProtKB:Q9EPX4 P P2Y purinoceptor 12 P2RY12|HORK3 protein taxon:9606 20180522 ARUK-UCL part_of(GO:0071318),occurs_in(CL:0000129)|part_of(GO:0071415),occurs_in(CL:0000129) UniProtKB:Q9H244 `

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

• total: 13

messages

• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:1196458 Scarb2 enables GO:0042803 PMID:29199275 IPI UniProtKB:O35114 F scavenger receptor class B, member 2 9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2 protein NCBITaxon:10090 20181031 ARUK-UCL MGI:MGI:1196458 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:894311 Pirb enables GO:0042803 PMID:24052308 IPI UniProtKB:P97484 F paired Ig-like receptor B Gp91|Lilrb3 protein NCBITaxon:10090 20230314 ARUK-UCL causally_upstream_of(GO:0001540) MGI:MGI:894311 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:97275 Myod1 enables GO:0042803 PMID:10652346 IPI UniProtKB:P10085 F myogenic differentiation 1 MYF3|MyoD|Myod-1|bHLHc1 protein NCBITaxon:10090 20230314 ARUK-UCL MGI:MGI:97275 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05067 APP enables GO:0042803 PMID:15447668 IPI UniProtKB:P05067-PRO_0000000092 F Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20230314 ARUK-UCL UniProtKB:P05067-PRO_0000000092 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05067 APP enables GO:0042803 PMID:15447668 IPI UniProtKB:P05067-PRO_0000000093 F Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20230314 ARUK-UCL UniProtKB:P05067-PRO_0000000093 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05067 APP enables GO:0042803 PMID:18568035 IPI UniProtKB:P05067-PRO_0000000092 F Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20170213 ARUK-UCL UniProtKB:P05067-PRO_0000000092 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05067 APP enables GO:0042803 PMID:22179788 IPI UniProtKB:P05067-PRO_0000000093 F Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20230314 ARUK-UCL UniProtKB:P05067-PRO_0000000093 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05067 APP enables GO:0042803 PMID:23386614 IPI UniProtKB:P05067-PRO_0000000092 F Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20230314 ARUK-UCL UniProtKB:P05067-PRO_0000000092 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05067 APP involved_in GO:0051260 PMID:15447668 IPI UniProtKB:P05067-PRO_0000000092 P Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20230314 ARUK-UCL UniProtKB:P05067-PRO_0000000092 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05067 APP involved_in GO:0051260 PMID:15447668 IPI UniProtKB:P05067-PRO_0000000093 P Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20230314 ARUK-UCL has_input(UniProtKB:P05067-PRO_0000000093) UniProtKB:P05067-PRO_0000000093 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05067 APP involved_in GO:0051260 PMID:18602473 IPI UniProtKB:P05067-PRO_0000000093 P Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20230314 ARUK-UCL UniProtKB:P05067-PRO_0000000093 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05067 APP involved_in GO:0051260 PMID:23386614 IPI UniProtKB:P05067-PRO_0000000092 P Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20230314 ARUK-UCL has_input(UniProtKB:P05067) UniProtKB:P05067-PRO_0000000092 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P10636 MAPT involved_in GO:0051260 PMID:26704708 IPI UniProtKB:P10636-8 P Microtubule-associated protein tau MAPT|MAPTL|MTBT1|TAU protein taxon:9606 20230314 ARUK-UCL happens_during(UBERON:0000112),happens_during(GO:0018105),occurs_in(UBERON:0002421),regulates(GO:0007611)|happens_during(UBERON:0018241),happens_during(GO:0018105),occurs_in(UBERON:0002421),regulates(GO:0007611) UniProtKB:P10636-8 `