GORULE violations assigned by ParkinsonsUK-UCL

Contents

gorule-0000005 IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations are not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

gorule-0000020 Automatic repair of annotations to merged or obsoleted terms

gorule-0000039 Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

gorule-0000046 The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

gorule-0000061 Allowed gene product to term relations (gp2term)

MESSAGES

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations are not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

• total: 1

messages

• WARNING - Violates GO Rule:GORULE:0000005: IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to 'binding ; GO:0005488' or 'protein binding ; GO:0005515'--`RGD 621808 Park7 enables GO:0005515 GO_REF:0000024 ISS UniProtKB:Q99497 F Parkinsonism associated deglycase protein NCBITaxon:10116 20210910 ParkinsonsUK-UCL RGD:621808 `

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 55

messages

• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`MGI MGI:109247 Ddit3 involved_in GO:0072655 PMID:14752510 IDA P DNA-damage inducible transcript 3 C/EBP homoologous protein 10|CHOP-10|CHOP10|chop|gadd153 protein NCBITaxon:10090 20160613 ParkinsonsUK-UCL has_input(UniProtKB:Q07813),part_of(GO:0043065) MGI:MGI:109247 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`MGI MGI:88222 Tspo involved_in GO:0072655 PMID:25470454 IMP P translocator protein Bzrp|PBR|Tspo1 protein NCBITaxon:10090 20250115 ParkinsonsUK-UCL has_input(UniProtKB:Q64337) MGI:MGI:88222 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P19367 HK1 involved_in GO:0072655 PMID:23962723 IMP P Hexokinase-1 HK1 protein taxon:9606 20150722 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P19367 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P31749 AKT1 involved_in GO:0072655 PMID:23962723 IMP P RAC-alpha serine/threonine-protein kinase AKT1|PKB|RAC protein taxon:9606 20150722 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P31749 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P52789 HK2 involved_in GO:0072655 PMID:23962723 IMP P Hexokinase-2 HK2 protein taxon:9606 20151102 ParkinsonsUK-UCL occurs_in(CL:0000540),has_input(UniProtKB:O60260) UniProtKB:P52789 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9BXM7 PINK1 involved_in GO:0072655 PMID:25527497 IMP P Serine/threonine-protein kinase PINK1, mitochondrial PINK1 protein taxon:9606 20150722 ParkinsonsUK-UCL UniProtKB:Q9BXM7 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q8N726 CDKN2A involved_in GO:1903051 PMID:25217637 IMP UniProtKB:Q9BXM7 P Tumor suppressor ARF CDKN2A|CDKN2|MLM protein taxon:9606 20150216 ParkinsonsUK-UCL has_input(UniProtKB:Q9BXM7) UniProtKB:Q8N726-2 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`RGD 2445 Ctsc involved_in GO:1903052 PMID:18307834 IDA P cathepsin C protein NCBITaxon:10116 20140527 ParkinsonsUK-UCL RGD:2445 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9UII2 ATP5IF1 involved_in GO:1903052 PMID:24005319 IMP P ATPase inhibitor, mitochondrial ATP5IF1|ATPI|ATPIF1 protein taxon:9606 20150210 ParkinsonsUK-UCL part_of(GO:0000422),has_input(UniProtKB:Q9BXM7) UniProtKB:Q9UII2 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`MGI MGI:1332659 Bnip3l involved_in GO:1903214 PMID:20200478 IGI UniProtKB:Q9Z2F7 P BCL2/adenovirus E1B interacting protein 3-like D14Ertd719e|Nip3L|Nix protein NCBITaxon:10090 20150121 ParkinsonsUK-UCL has_input(UniProtKB:Q8R3R8) MGI:MGI:1332659 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB O00165 HAX1 involved_in GO:1903214 PMID:24522549 TAS P HCLS1-associated protein X-1 HAX1|HS1BP1 protein taxon:9606 20140828 ParkinsonsUK-UCL has_input(UniProtKB:O43464) UniProtKB:O00165 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB O60260 PRKN involved_in GO:1903214 PMID:20890124 NAS P E3 ubiquitin-protein ligase parkin PRKN|PARK2 protein taxon:9606 20150215 ParkinsonsUK-UCL UniProtKB:O60260 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P36956 SREBF1 involved_in GO:1903214 PMID:24912190 IMP P Sterol regulatory element-binding protein 1 SREBF1|BHLHD1|SREBP1 protein taxon:9606 20180310 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P36956 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q8N726 CDKN2A involved_in GO:1903214 PMID:25217637 IMP UniProtKB:Q9BXM7 P Tumor suppressor ARF CDKN2A|CDKN2|MLM protein taxon:9606 20150216 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q8N726-2 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9BXM7 PINK1 involved_in GO:1903214 PMID:21508222 IGI UniProtKB:Q9BXM7 P Serine/threonine-protein kinase PINK1, mitochondrial PINK1 protein taxon:9606 20150310 ParkinsonsUK-UCL occurs_in(CL:0000700),has_input(UniProtKB:O60260) UniProtKB:Q9BXM7 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9BXM7 PINK1 involved_in GO:1903214 PMID:23212910 IMP P Serine/threonine-protein kinase PINK1, mitochondrial PINK1 protein taxon:9606 20150223 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q9BXM7 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9H300 PARL involved_in GO:1903214 PMID:21355049 IGI UniProtKB:O60260|UniProtKB:Q9BXM7 P Presenilin-associated rhomboid-like protein, mitochondrial PARL|PSARL|PRO2207 protein taxon:9606 20150209 ParkinsonsUK-UCL has_input(UniProtKB:O60260)|has_input(UniProtKB:Q9BXM7) UniProtKB:Q9H300 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9H300 PARL involved_in GO:1903214 PMID:24522549 NAS P Presenilin-associated rhomboid-like protein, mitochondrial PARL|PSARL|PRO2207 protein taxon:9606 20140827 ParkinsonsUK-UCL has_input(UniProtKB:Q9BXM7) UniProtKB:Q9H300 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9UII2 ATP5IF1 involved_in GO:1903214 PMID:24005319 IMP P ATPase inhibitor, mitochondrial ATP5IF1|ATPI|ATPIF1 protein taxon:9606 20150210 ParkinsonsUK-UCL part_of(GO:1903146),has_input(UniProtKB:O60260) UniProtKB:Q9UII2 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB O95429 BAG4 involved_in GO:1903215 PMID:24270810 IMP P BAG family molecular chaperone regulator 4 BAG4|SODD protein taxon:9606 20150422 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:O95429 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P49257 LMAN1 involved_in GO:1903215 PMID:24270810 HMP P Protein ERGIC-53 LMAN1|ERGIC53|F5F8D protein taxon:9606 20180313 ParkinsonsUK-UCL UniProtKB:P49257 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q5S007 LRRK2 involved_in GO:1903215 PMID:21370995 IDA P Leucine-rich repeat serine/threonine-protein kinase 2 LRRK2|PARK8 protein taxon:9606 20140731 ParkinsonsUK-UCL has_input(UniProtKB:P12532) UniProtKB:Q5S007 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q5S007 LRRK2 involved_in GO:1903217 PMID:21370995 IC GO:0010955|GO:1903215 P Leucine-rich repeat serine/threonine-protein kinase 2 LRRK2|PARK8 protein taxon:9606 20140724 ParkinsonsUK-UCL UniProtKB:Q5S007 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q8IW03 SIAH3 involved_in GO:1903215 PMID:24270810 IDA P Seven in absentia homolog 3 SIAH3 protein taxon:9606 20150422 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q8IW03 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q5S007 LRRK2 involved_in GO:1903217 PMID:21370995 IC GO:0010955|GO:1903215 P Leucine-rich repeat serine/threonine-protein kinase 2 LRRK2|PARK8 protein taxon:9606 20140724 ParkinsonsUK-UCL UniProtKB:Q5S007 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB O15243 LEPROT involved_in GO:1903955 PMID:24270810 HMP P Leptin receptor gene-related protein LEPROT|LEPR|OBR protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:O15243 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB O43464 HTRA2 involved_in GO:1903955 PMID:24270810 HMP P Serine protease HTRA2, mitochondrial HTRA2|OMI|PRSS25 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:O43464 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB O75143 ATG13 involved_in GO:1903955 PMID:24270810 HMP P Autophagy-related protein 13 ATG13|KIAA0652 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:O75143 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB O94929 ABLIM3 involved_in GO:1903955 PMID:24270810 HMP P Actin-binding LIM protein 3 ABLIM3|KIAA0843|HMFN1661 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:O94929 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB O95376 ARIH2 involved_in GO:1903955 PMID:24270810 HMP P E3 ubiquitin-protein ligase ARIH2 ARIH2|ARI2|TRIAD1|HT005 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:O95376 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P15153 RAC2 involved_in GO:1903955 PMID:24270810 HMP P Ras-related C3 botulinum toxin substrate 2 RAC2 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P15153 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P19784 CSNK2A2 involved_in GO:1903955 PMID:24912190 HMP P Casein kinase II subunit alpha' CSNK2A2|CK2A2 protein taxon:9606 20180310 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P19784 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P34931 HSPA1L involved_in GO:1903955 PMID:24270810 IMP P Heat shock 70 kDa protein 1-like HSPA1L protein taxon:9606 20150225 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P34931 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P49840 GSK3A involved_in GO:1903955 PMID:24912190 IMP P Glycogen synthase kinase-3 alpha GSK3A protein taxon:9606 20180310 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P49840 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P55786 NPEPPS involved_in GO:1903955 PMID:24270810 HMP P Puromycin-sensitive aminopeptidase NPEPPS|PSA protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P55786 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P61077 UBE2D3 involved_in GO:1903955 PMID:24270810 HMP P Ubiquitin-conjugating enzyme E2 D3 UBE2D3|UBC5C|UBCH5C protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P61077 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P68036 UBE2L3 involved_in GO:1903955 PMID:24270810 HMP P Ubiquitin-conjugating enzyme E2 L3 UBE2L3|UBCE7|UBCH7 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:P68036 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q12772 SREBF2 involved_in GO:1903955 PMID:24912190 HMP P Sterol regulatory element-binding protein 2 SREBF2|BHLHD2|SREBP2 protein taxon:9606 20180310 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q12772 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q13467 FZD5 involved_in GO:1903955 PMID:24912190 HMP P Frizzled-5 FZD5|C2orf31 protein taxon:9606 20180310 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q13467 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q7L0Q8 RHOU involved_in GO:1903955 PMID:24270810 HMP P Rho-related GTP-binding protein RhoU RHOU|ARHU|CDC42L1|G28K|WRCH1|SB128 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q7L0Q8 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q7Z6Z7 HUWE1 involved_in GO:1903955 PMID:24270810 HMP P E3 ubiquitin-protein ligase HUWE1 HUWE1|KIAA0312|KIAA1578|UREB1|HSPC272 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q7Z6Z7 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q8IY33 MICALL2 involved_in GO:1903955 PMID:24270810 HMP P MICAL-like protein 2 MICALL2|JRAB protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q8IY33 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q8N2K1 UBE2J2 involved_in GO:1903955 PMID:24270810 HMP P Ubiquitin-conjugating enzyme E2 J2 UBE2J2|NCUBE2 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q8N2K1 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q8N7F7 UBL4B involved_in GO:1903955 PMID:24270810 HMP P Ubiquitin-like protein 4B UBL4B protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q8N7F7 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q92560 BAP1 involved_in GO:1903955 PMID:24270810 HMP P Ubiquitin carboxyl-terminal hydrolase BAP1 BAP1|KIAA0272|hucep-6 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q92560 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q969H0 FBXW7 involved_in GO:1903955 PMID:24912190 IMP P F-box/WD repeat-containing protein 7 FBXW7|FBW7|FBX30|SEL10 protein taxon:9606 20150421 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q969H0 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q96EP0 RNF31 involved_in GO:1903955 PMID:24270810 HMP P E3 ubiquitin-protein ligase RNF31 RNF31|ZIBRA protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q96EP0 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9BXM7 PINK1 involved_in GO:1903955 PMID:24270810 HMP P Serine/threonine-protein kinase PINK1, mitochondrial PINK1 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q9BXM7 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9BZL1 UBL5 involved_in GO:1903955 PMID:24270810 HMP P Ubiquitin-like protein 5 UBL5 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q9BZL1 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9H270 VPS11 involved_in GO:1903955 PMID:24270810 HMP P Vacuolar protein sorting-associated protein 11 homolog VPS11|RNF108|PP3476 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q9H270 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9NQG7 HPS4 involved_in GO:1903955 PMID:24270810 HMP P BLOC-3 complex member HPS4 HPS4|KIAA1667 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q9NQG7 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9P0U1 TOMM7 involved_in GO:1903955 PMID:24270810 IMP P Mitochondrial import receptor subunit TOM7 homolog TOMM7|TOM7|TOMM07|AD-014 protein taxon:9606 20150422 ParkinsonsUK-UCL has_input(UniProtKB:O60260),occurs_in(CL:0000540)|has_input(UniProtKB:Q9BXM7),happens_during(GO:0000422) UniProtKB:Q9P0U1 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9P275 USP36 involved_in GO:1903955 PMID:24912190 HMP P Ubiquitin carboxyl-terminal hydrolase 36 USP36|KIAA1453 protein taxon:9606 20180310 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q9P275 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9UBE0 SAE1 involved_in GO:1903955 PMID:24270810 HMP P SUMO-activating enzyme subunit 1 SAE1|AOS1|SUA1|UBLE1A protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q9UBE0 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q9Y371 SH3GLB1 involved_in GO:1903955 PMID:24270810 HMP P Endophilin-B1 SH3GLB1|KIAA0491|CGI-61 protein taxon:9606 20180313 ParkinsonsUK-UCL has_input(UniProtKB:O60260) UniProtKB:Q9Y371 `

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

• total: 1

messages

• ERROR - Violates GO Rule:GORULE:0000039: Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants--`ComplexPortal CPX-263 nsfl1c-vcp_rat part_of GO:1990730 PMID:9214505 IDA C Vcp-Nsfl1c AAA ATPase complex 3xNsfl1c:6xVcp|p47-VCP complex|NSFL1-VCP complex|NSFL1-p97 complex|p47-p97 complex|NSFL1C-p97 complex protein_complex taxon:10116 20180219 ParkinsonsUK-UCL `

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

• total: 8

messages

• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:1352504 Hip1r enables GO:0042803 PMID:11564758 IPI UniProtKB:Q9JKY5 F huntingtin interacting protein 1 related protein NCBITaxon:10090 20230309 ParkinsonsUK-UCL MGI:MGI:1352504 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:1352504 Hip1r enables GO:0042803 PMID:15533940 IPI UniProtKB:Q9JKY5 F huntingtin interacting protein 1 related protein NCBITaxon:10090 20230309 ParkinsonsUK-UCL MGI:MGI:1352504 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:1352504 Hip1r enables GO:0042803 PMID:18790740 IPI UniProtKB:Q9JKY5 F huntingtin interacting protein 1 related protein NCBITaxon:10090 20230309 ParkinsonsUK-UCL MGI:MGI:1352504 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:1921256 Dnm1l enables GO:0042803 PMID:20585624 IPI UniProtKB:Q8K1M6 F dynamin 1-like 6330417M19Rik|Dnmlp1|Drp1|python protein NCBITaxon:10090 20230309 ParkinsonsUK-UCL MGI:MGI:1921256 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 2326 Cebpa enables GO:0042803 PMID:8657121 IPI UniProtKB:P05554 F CCAAT/enhancer binding protein alpha protein NCBITaxon:10116 20141016 ParkinsonsUK-UCL RGD:2326 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 619781 Erp29 enables GO:0042803 PMID:9714535 IPI UniProtKB:P52555 F endoplasmic reticulum protein 29 protein NCBITaxon:10116 20230309 ParkinsonsUK-UCL RGD:619781 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 68397 Syt4 enables GO:0042803 PMID:10397765 IPI UniProtKB:P50232 F synaptotagmin 4 protein NCBITaxon:10116 20230309 ParkinsonsUK-UCL RGD:68397 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`SGD S000003924 DNM1 involved_in GO:0051260 PMID:21170049 IDA P dynamin-related GTPase DNM1 DRP1|YLL001W protein NCBITaxon:559292 20170207 ParkinsonsUK-UCL SGD:S000003924 `

gorule-0000061

Allowed gene product to term relations (gp2term)

• total: 1

messages

• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025--`UniProtKB O95602 POLR1A part_of GO:0000785 PMID:23782956 IMP C DNA-directed RNA polymerase I subunit RPA1 POLR1A protein taxon:9606 20241221 ParkinsonsUK-UCL UniProtKB:O95602 `