fungal structure
type: Class
subclass of: UBERON_0000061
subclass of: Restriction
  on property: RO_0002160
  some values from: NCBITaxon 4751
IAO_0000115: An anatomical structure that forms all or part of a fungus.
has db xref: BTO:0001494
has OBO namespace: fungal_anatomy_ontology
has related synonym: fungal structure ontology
id: FAO:0000001

Axiom
annotated source: fungal structure
annotated property: IAO_0000115
annotated target: An anatomical structure that forms all or part of a fungus.
has db xref: FAO:mah

basidium
type: Class
subclass of: sporangium
subclass of: Restriction
  on property: BFO_0000050
  some values from: basidiocarp
IAO_0000115: A spore-producing structure found in a Basidiomycete; formed when the terminal cell of a dikaryotic hyphal branch inflates and undergoes karyogamy and meiosis.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000003

Axiom
annotated source: basidium
annotated property: IAO_0000115
annotated target: A spore-producing structure found in a Basidiomycete; formed when the terminal cell of a dikaryotic hyphal branch inflates and undergoes karyogamy and meiosis.
has db xref: FAO:curators
has db xref: ISBN:0471940526

fruitbody
type: Class
subclass of: multicellular fungal structure, multicellular organism
IAO_0000115: Any specialized structure which bears or contains sexually or asexually derived spores.
has db xref: BTO:0000487
has exact synonym: fruiting body
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000007

Axiom
annotated source: fruitbody
annotated property: IAO_0000115
annotated target: Any specialized structure which bears or contains sexually or asexually derived spores.
has db xref: FAO:curators
has db xref: SGD:clt

ascocarp
type: Class
subclass of: fruitbody
IAO_0000115: A structure within, or at the surface of, which an ascus develops in Ascomycetes.
has db xref: BTO:0002161
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000008

Axiom
annotated source: ascocarp
annotated property: IAO_0000115
annotated target: A structure within, or at the surface of, which an ascus develops in Ascomycetes.
has db xref: ISBN:0471940526

sporophore
type: Class
subclass of: multicellular fungal structure, multicellular organism
IAO_0000115: A multicellular anatomical structure that functions in the production of spores, which are directly borne upon or within sporogenous cells that form part of the sporophore.
has db xref: GO:0075259
has exact synonym: fruit body
has exact synonym: fruitbody
has exact synonym: fruiting body
has exact synonym: spore-bearing structure
has exact synonym: spore-producing structure
has exact synonym: sporocarp
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000010

Axiom
annotated source: sporophore
annotated property: hasExactSynonym
annotated target: fruiting body
has db xref: FAO:doi

Axiom
annotated source: sporophore
annotated property: hasExactSynonym
annotated target: spore-bearing structure
has db xref: FAO:doi

Axiom
annotated source: sporophore
annotated property: hasExactSynonym
annotated target: spore-producing structure
has db xref: FAO:doi

Axiom
annotated source: sporophore
annotated property: hasExactSynonym
annotated target: sporocarp
has db xref: FAO:doi

Axiom
annotated source: sporophore
annotated property: IAO_0000115
annotated target: A multicellular anatomical structure that functions in the production of spores, which are directly borne upon or within sporogenous cells that form part of the sporophore.
has db xref: FAO:curators

Axiom
annotated source: sporophore
annotated property: hasExactSynonym
annotated target: fruit body
has db xref: FAO:doi

Axiom
annotated source: sporophore
annotated property: hasExactSynonym
annotated target: fruitbody
has db xref: FAO:doi

mycelium
type: Class
subclass of: multicellular fungal structure, multicellular organism
IAO_0000115: A group or mass of discrete hyphae; the vegetative structure of many fungi.
has db xref: BTO:0001436
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000011

Axiom
annotated source: mycelium
annotated property: IAO_0000115
annotated target: A group or mass of discrete hyphae; the vegetative structure of many fungi.
has db xref: ISBN:0471940526

basidiocarp
type: Class
subclass of: fruitbody
IAO_0000115: A large fruiting body that is composed of masses of intertwined hyphal elements and produces basidia and basidiospores. The basidiocarp is characteristic of the majority of fungi of the subphylum Basidiomycotina, in which it is the site of karyogamy and meiosis. Mushrooms and toadstools are common examples.
has alternative id: FAO:0001024
has db xref: BTO:0000114
has OBO namespace: fungal_anatomy_ontology
has related synonym: mushroom
id: FAO:0000012

Axiom
annotated source: basidiocarp
annotated property: IAO_0000115
annotated target: A large fruiting body that is composed of masses of intertwined hyphal elements and produces basidia and basidiospores. The basidiocarp is characteristic of the majority of fungi of the subphylum Basidiomycotina, in which it is the site of karyogamy and meiosis. Mushrooms and toadstools are common examples.
has db xref: BTO:0000114
has db xref: ISBN:0471940526

ascus
type: Class
subclass of: sporangium
IAO_0000115: A sac-like structure containing sexual spores formed by Ascomycotina; mature asci may have little or no cytoplasm or cytoplasmic contents, and no nucleus outside of the spores.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000014

Axiom
annotated source: ascus
annotated property: IAO_0000115
annotated target: A sac-like structure containing sexual spores formed by Ascomycotina; mature asci may have little or no cytoplasm or cytoplasmic contents, and no nucleus outside of the spores.
has db xref: SGD:clt

sexual spore
type: Class
subclass of: spore
IAO_0000115: A spore formed following meiosis. In some species, prospores formed by meiosis may undergo one or more rounds of mitosis before they are fully mature.
has OBO namespace: fungal_anatomy_ontology
has related synonym: meiotically-derived spore
id: FAO:0000017

Axiom
annotated source: sexual spore
annotated property: IAO_0000115
annotated target: A spore formed following meiosis. In some species, prospores formed by meiosis may undergo one or more rounds of mitosis before they are fully mature.
has db xref: SGD:clt

unicellular structure
type: Class
subclass of: fungal structure
IAO_0000115: A fungal structure that comprises a single cell. An individual cell is composed of a plasma membrane, contents internal to the plasma membrane, and any external protective or encapsulating structure.
has exact synonym: cell
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000018

Axiom
annotated source: unicellular structure
annotated property: IAO_0000115
annotated target: A fungal structure that comprises a single cell. An individual cell is composed of a plasma membrane, contents internal to the plasma membrane, and any external protective or encapsulating structure.
has db xref: FAO:curators
has db xref: FAO:mah
has db xref: SGD:clt

spore
type: Class
subclass of: unicellular structure
IAO_0000115: A spore produced by a fungus. A spore is a differentiated form of an organism produced during or as a result of an asexual or sexual reproductive process; usually a cell with a thick cell wall that stores and protects one or more nuclei. Spores may be produced in response to, and are characteristically resistant to, adverse environmental conditions.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000019

Axiom
annotated source: spore
annotated property: IAO_0000115
annotated target: A spore produced by a fungus. A spore is a differentiated form of an organism produced during or as a result of an asexual or sexual reproductive process; usually a cell with a thick cell wall that stores and protects one or more nuclei. Spores may be produced in response to, and are characteristically resistant to, adverse environmental conditions.
has db xref: ISBN:0471940526

basidiospore
type: Class
subclass of: sexual spore
subclass of: Restriction
  on property: BFO_0000050
  some values from: basidium
IAO_0000115: A thick-walled spore formed externally on extrusions of a basidium following sexual reproduction; found in Basidiomycetes.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000021

Axiom
annotated source: basidiospore
annotated property: IAO_0000115
annotated target: A thick-walled spore formed externally on extrusions of a basidium following sexual reproduction; found in Basidiomycetes.
has db xref: ISBN:0471940526
has db xref: ISBN:9781107079915
has db xref: SGD:clt

teliospore
type: Class
subclass of: basidiospore
IAO_0000115: A diploid spore with a thick, pigmented, sculpted cell wall, and extracellular peptidoglycan spikes that is formed during growth in a plant host by some Basidiomycete species, including pathogenic smut (Ustilaginales) and rust (Pucciniales) fungi.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000022

Axiom
annotated source: teliospore
annotated property: IAO_0000115
annotated target: A diploid spore with a thick, pigmented, sculpted cell wall, and extracellular peptidoglycan spikes that is formed during growth in a plant host by some Basidiomycete species, including pathogenic smut (Ustilaginales) and rust (Pucciniales) fungi.
has db xref: FAO:mah
has db xref: PMID:27888605
has db xref: PMID:8898211
has db xref: SGD:clt

asexual spore
type: Class
subclass of: spore
IAO_0000115: A spore formed following one or more rounds of mitosis, without meiosis.
has OBO namespace: fungal_anatomy_ontology
has related synonym: mitotically-derived spore
id: FAO:0000023

Axiom
annotated source: asexual spore
annotated property: IAO_0000115
annotated target: A spore formed following one or more rounds of mitosis, without meiosis.
has db xref: PMID:2524423
has db xref: PMID:9529886
has db xref: SGD:clt

conidium
type: Class
subclass of: asexual spore
IAO_0000115: An asexual, nonmotile spore formed by higher fungi. Conidia are usually made from the side or tip of specialized sporogenous cells and do not form by progressive cleavage of the cytoplasm.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000024

Axiom
annotated source: conidium
annotated property: IAO_0000115
annotated target: An asexual, nonmotile spore formed by higher fungi. Conidia are usually made from the side or tip of specialized sporogenous cells and do not form by progressive cleavage of the cytoplasm.
has db xref: PMID:2524423
has db xref: PMID:9529886
has db xref: SGD:clt

urediniospore
type: Class
subclass of: basidiospore
IAO_0000115: A thin-walled spore that is formed in a uredinium and is the primary dispersal mode for rust-causing Basidiomycete fungi.
has exact synonym: urediospore
has exact synonym: uredospore
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000026

Axiom
annotated source: urediniospore
annotated property: IAO_0000115
annotated target: A thin-walled spore that is formed in a uredinium and is the primary dispersal mode for rust-causing Basidiomycete fungi.
has db xref: FAO:mah
has db xref: PMID:21642346
has db xref: PMID:26731728
has db xref: PMID:30206343
has db xref: SGD:clt

Axiom
annotated source: urediniospore
annotated property: hasExactSynonym
annotated target: urediospore
has db xref: FAO:mah

Axiom
annotated source: urediniospore
annotated property: hasExactSynonym
annotated target: uredospore
has db xref: FAO:mah

macroconidium
type: Class
subclass of: conidium
IAO_0000115: The larger of two types of asexual spores formed by some fungi; usually round or oblong.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000038

Axiom
annotated source: macroconidium
annotated property: IAO_0000115
annotated target: The larger of two types of asexual spores formed by some fungi; usually round or oblong.
has db xref: ISBN:0471940526
has db xref: SGD:clt

oospore
type: Class
subclass of: asexual spore
IAO_0000115: An asexual spore formed by Oomycetes; formed upon fertilization of an oosphere.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000039

Axiom
annotated source: oospore
annotated property: IAO_0000115
annotated target: An asexual spore formed by Oomycetes; formed upon fertilization of an oosphere.
has db xref: ISBN:0851988857
has db xref: SGD:clt

arthroconidium
type: Class
subclass of: macroconidium
IAO_0000115: A cylindrical spore formed by development and compartmentation of hyphae; the hyphae are often supporting blastoconidiophores.
has OBO namespace: fungal_anatomy_ontology
has related synonym: arthrospore
id: FAO:0000041

Axiom
annotated source: arthroconidium
annotated property: IAO_0000115
annotated target: A cylindrical spore formed by development and compartmentation of hyphae; the hyphae are often supporting blastoconidiophores.
has db xref: PMID:2524423
has db xref: SGD:clt

blastoconidium
type: Class
subclass of: macroconidium
IAO_0000115: An oblong or round asexual reproductive spore formed specifically by budding.
has db xref: GO:0034299
has OBO namespace: fungal_anatomy_ontology
has related synonym: blastospore
has related synonym: reproductive blastospore
id: FAO:0000042

Axiom
annotated source: blastoconidium
annotated property: IAO_0000115
annotated target: An oblong or round asexual reproductive spore formed specifically by budding.
has db xref: CGD:doi
has db xref: PMID:2524423
has db xref: SGD:clt

conidiophore
type: Class
subclass of: multicellular fungal structure, multicellular organism
subclass of: Restriction
  on property: RO_0002202
  some values from: hypha
IAO_0000115: A specialized hypha, often aerial, that gives rise to asexual spores known as conidia.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000043

Axiom
annotated source: conidiophore
annotated property: IAO_0000115
annotated target: A specialized hypha, often aerial, that gives rise to asexual spores known as conidia.
has db xref: AspGD:mcc
has db xref: ISBN:0471522295
has db xref: PMID:9529886

sterigma
type: Class
subclass of: fungal structure
subclass of: Restriction
  on property: BFO_0000050
  some values from: conidiophore
IAO_0000115: A small hyphal branch or structure which supports a sporangium, a conidium, or a basidiospore. In species with biseriate (two-layered) sterigmata such as A. nidulans, the first layer comprises primary sterigmata (metulae) and the second layer secondary sterigmata (phialides). Some species, e.g. A. fumigatus, A. oryzae, and others, have only phialides.
has exact synonym: sterigmata (plural)
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000044

Axiom
annotated source: sterigma
annotated property: IAO_0000115
annotated target: A small hyphal branch or structure which supports a sporangium, a conidium, or a basidiospore. In species with biseriate (two-layered) sterigmata such as A. nidulans, the first layer comprises primary sterigmata (metulae) and the second layer secondary sterigmata (phialides). Some species, e.g. A. fumigatus, A. oryzae, and others, have only phialides.
has db xref: AspGD:mcc
has db xref: ISBN:0471522295

phialide
type: Class
subclass of: sterigma
IAO_0000115: A specialized cell that buds from a metula on a developing conidiophore. Multiple phialides may bud from each metula. The phialides in turn divide asymmetrically to give rise to chains of conidia.
has exact synonym: secondary sterigma
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000045

Axiom
annotated source: phialide
annotated property: IAO_0000115
annotated target: A specialized cell that buds from a metula on a developing conidiophore. Multiple phialides may bud from each metula. The phialides in turn divide asymmetrically to give rise to chains of conidia.
has db xref: AspGD:mcc
has db xref: PMID:9529886

metula
type: Class
subclass of: sterigma
IAO_0000115: A specialized cell borne on a conidiophore that gives rise to phialides during the process of conidiation.
has exact synonym: metulae (plural)
has exact synonym: primary sterigma
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000046

Axiom
annotated source: metula
annotated property: IAO_0000115
annotated target: A specialized cell borne on a conidiophore that gives rise to phialides during the process of conidiation.
has db xref: AspGD:mcc
has db xref: PMID:9529886

cleistothecium
type: Class
subclass of: ascocarp
IAO_0000115: A completely closed fruiting body formed by some fungi of the Ascomycota, containing asci.
has db xref: BTO:0002159
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000047

Axiom
annotated source: cleistothecium
annotated property: IAO_0000115
annotated target: A completely closed fruiting body formed by some fungi of the Ascomycota, containing asci.
has db xref: AspGD:mcc
has db xref: ISBN:0471522295

Hulle cell
type: Class
subclass of: unicellular structure
subclass of: Restriction
  on property: RO_0002202
  some values from: hypha
IAO_0000115: A specialized multinucleate cell that originates from a nest-like aggregation of hyphae during sexual development. Hulle cells serve as nurse cells to the developing cleistothecium.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000048
comment: Note that "Hulle" is properly written with an umlaut on the "u".

Axiom
annotated source: Hulle cell
annotated property: IAO_0000115
annotated target: A specialized multinucleate cell that originates from a nest-like aggregation of hyphae during sexual development. Hulle cells serve as nurse cells to the developing cleistothecium.
has db xref: AspGD:mcc
has db xref: PMID:19210625

conidiophore stalk
type: Class
subclass of: fungal structure
subclass of: Restriction
  on property: BFO_0000050
  some values from: conidiophore
IAO_0000115: The elongated part of the conidiophore that extends, often aerially, from the growth substrate and supports the structures that bear conidia.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000050

Axiom
annotated source: conidiophore stalk
annotated property: IAO_0000115
annotated target: The elongated part of the conidiophore that extends, often aerially, from the growth substrate and supports the structures that bear conidia.
has db xref: AspGD:mcc
has db xref: PMID:9529886

sporangium
type: Class
subclass of: sporophore
IAO_0000115: A structure within which spores develop.
created by: Maria
creation date: 2011-06-10T12:06:16Z
has db xref: GO:0043582
has OBO namespace: fungal_anatomy_ontology
id: FAO:0000052

Axiom
annotated source: sporangium
annotated property: IAO_0000115
annotated target: A structure within which spores develop.
has db xref: FAO:curators

hypha
type: Class
subclass of: multicellular fungal structure, multicellular organism
IAO_0000115: A long, branching filamentous structure formed by a vegetatively growing fungus.
has OBO namespace: fungal_anatomy_ontology
id: FAO:0001001

Axiom
annotated source: hypha
annotated property: IAO_0000115
annotated target: A long, branching filamentous structure formed by a vegetatively growing fungus.
has db xref: FAO:mah
has db xref: FAO:mcc
has db xref: ISBN:0471522295

substrate mycelium
type: Class
subclass of: multicellular fungal structure, multicellular organism
IAO_0000115: An invasive mycelium that forms within a solid or semi-solid substrate such as wood, soil or agar.
has db xref: BTO:0001562
has OBO namespace: fungal_anatomy_ontology
id: FAO:0001030

Axiom
annotated source: substrate mycelium
annotated property: IAO_0000115
annotated target: An invasive mycelium that forms within a solid or semi-solid substrate such as wood, soil or agar.
has db xref: FAO:doi

aerial mycelium
type: Class
subclass of: mycelium
IAO_0000115: A mycelium that forms prior to sporulation and extends aerially, or perpendicular, to its substrate.
has db xref: BTO:0001562
has OBO namespace: fungal_anatomy_ontology
id: FAO:0001031

Axiom
annotated source: aerial mycelium
annotated property: subClassOf
annotated target: mycelium
source: BTO:0001562

Axiom
annotated source: aerial mycelium
annotated property: IAO_0000115
annotated target: A mycelium that forms prior to sporulation and extends aerially, or perpendicular, to its substrate.
has db xref: FAO:doi

multicellular fungal structure
type: Class
subclass of: fungal structure
IAO_0000115: A fungal structure that comprises more than one cell.
created by: midori
creation date: 2019-05-03T13:33:22Z
has OBO namespace: fungal_anatomy_ontology
id: FAO:0002002

Axiom
annotated source: multicellular fungal structure
annotated property: IAO_0000115
annotated target: A fungal structure that comprises more than one cell.
has db xref: FAO:mah

multicellular fungal structure, multicellular organism
type: Class
subclass of: multicellular fungal structure
IAO_0000115: A multicellular fungal structure composed of two or more cells of a single multicellular organism.
created by: midori
creation date: 2019-05-03T14:10:13Z
has exact synonym: multicellular structure, multicellular organism
has OBO namespace: fungal_anatomy_ontology
id: FAO:0002004

Axiom
annotated source: multicellular fungal structure, multicellular organism
annotated property: IAO_0000115
annotated target: A multicellular fungal structure composed of two or more cells of a single multicellular organism.
has db xref: FAO:doi

Axiom
annotated source: multicellular fungal structure, multicellular organism
annotated property: hasExactSynonym
annotated target: multicellular structure, multicellular organism
has db xref: FAO:doi